Pregenerated sensors for RNF126 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035890Ensembl transcript IDs: ENSMUST00000047203.9
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGTACTGCCGGCCGCCACGGGCAGCACCTCTAGTCCACAGCCATaGCGGGCGGGCAGGCGGGCGGTGCTGGGGCACCTGGGGTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: QVLPAATGSTSSPQP*RAGRRAVLGHLGWV Trigger: CACCCACCCCAGGTGCCCCAGCACCGCCCGCCTGCCCGCCCGCCATGGCTGTGGACTAGAGGTGCTGCCCGTGGCGGCCGGCAGTACCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CCA 90 bp | GAGGCCGGCGCTGGTTGGGTGCTGGGCCCGGCCTCCCAGGGCGTGTaGCGGGCTGGGCCTGGCGACAGTTCTGCTGACTCTCCACAGACC | + |
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Preference number: 1 (lower is better) Translates to: EAGAGWVLGPASQGV*RAGPGDSSADSPQT Trigger: GGTCTGTGGAGAGTCAGCAGAACTGTCGCCAGGCCCAGCCCGCCACACGCCCTGGGAGGCCGGGCCCAGCACCCAACCAGCGCCGGCCTC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CCA 90 bp | TGTTCCTGGGTCTGCTGGTCACCCTTGTGGTCCCGAGGCCGGCGCTaGTTGGGTGCTGGGCCCGGCCTCCCAGGGCGTGTGGCGGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: CSWVCWSPLWSRGRR*LGAGPGLPGRVAGW Trigger: CCAGCCCGCCACACGCCCTGGGAGGCCGGGCCCAGCACCCAACCAGCGCCGGCCTCGGGACCACAAGGGTGACCAGCAGACCCAGGAACA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CCA 90 bp | TTGTCTGCTGGAGCAGTTTGTTCCTGGGTCTGCTGGTCACCCTTGTaGTCCCGAGGCCGGCGCTGGTTGGGTGCTGGGCCCGGCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: LSAGAVCSWVCWSPL*SRGRRWLGAGPGLP Trigger: TGGGAGGCCGGGCCCAGCACCCAACCAGCGCCGGCCTCGGGACCACAAGGGTGACCAGCAGACCCAGGAACAAACTGCTCCAGCAGACAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CAA 90 bp | TCCTGGGTCTGCTGGTCACCCTTGTGGTCCCGAGGCCGGCGCTGGTaGGGTGCTGGGCCCGGCCTCCCAGGGCGTGTGGCGGGCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SWVCWSPLWSRGRRW*GAGPGLPGRVAGWA Trigger: GGCCCAGCCCGCCACACGCCCTGGGAGGCCGGGCCCAGCACCCAACCAGCGCCGGCCTCGGGACCACAAGGGTGACCAGCAGACCCAGGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCGGCCATGGCCAAGTCCAAGCCTGCCCGCAGCCTGGGGCCCGCCAGGTACGGTGCTGGGGCACCTaGGGTGGGTGGGATGACCAA | + |
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Preference number: 2 (lower is better) Translates to: RSGHGQVQACPQPGARQVRCWGT*GGWDDQ Trigger: TTGGTCATCCCACCCACCCCAGGTGCCCCAGCACCG...TACCTGGCGGGCCCCAGGCTGCGGGCAGGCTTGGACTTGGCCATGGCCGCTCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGTTAAGACGGACTGAAGGTGCCTGCCTGCTGGGGACATGGGACCCACGTTCTAGTCCACAGCCATaGCGGGCGGGCAGGCGGGCG | + |
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Preference number: 2 (lower is better) Translates to: VRLRRTEGACLLGTWDPRSSPQP*RAGRRA Trigger: CGCCCGCCTGCCCGCCCGCCATGGCTGTGGACTAGA...ACGTGGGTCCCATGTCCCCAGCAGGCAGGCACCTTCAGTCCGTCTTAACCTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CAA 90 bp | AAATTGTCTGCTGGAGCAGTTTGTTCCTGGGTCTGCTGGTCACCCTaGTGGTCCCGAGGCCGGCGCTGGTTGGGTGCTGGGCCCGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: KLSAGAVCSWVCWSP*WSRGRRWLGAGPGL Trigger: GAGGCCGGGCCCAGCACCCAACCAGCGCCGGCCTCGGGACCACAAGGGTGACCAGCAGACCCAGGAACAAACTGCTCCAGCAGACAATTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTGGCGGGCTGGGCCTGGCGACAGTTCTGCTGACTCTCCACAGACCATGCATGAGGTTAAGACGGACTaGAGGTGCCTGCCTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: VWRAGPGDSSADSPQTMHEVKTD*RCLPAG Trigger: CCCAGCAGGCAGGCACCTTCAGTCCGTCTTAACCTC...ATGCATGGTCTGTGGAGAGTCAGCAGAACTGTCGCCAGGCCCAGCCCGCCACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CCA 72 bp | GCTGGTCACCCTTGTGGTCCCGAGGCCGGCGCTGGTTaGGTGCTGGGCCCGGCCTCCCAGGGCGTGTGGCGG | + |
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Preference number: 3 (lower is better) Translates to: AGHPCGPEAGAG*VLGPASQGVWR Trigger: CCGCCACACGCCCTGGGAGGCCGGGCCCAGCACCCAACCAGCGCCGGCCTCGGGACCACAAGGGTGACCAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR GCA 72 bp | TCCAAGCCTGCCCGCAGCCTGGGGCCCGCCAGGTACTaGCGGCCGCCACGGGCAGCACCTCTAGTCCACAGC | + |
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Preference number: 3 (lower is better) Translates to: SKPARSLGPARY*RPPRAAPLVHS Trigger: GCTGTGGACTAGAGGTGCTGCCCGTGGCGGCCGGCAGTACCTGGCGGGCCCCAGGCTGCGGGCAGGCTTGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CCA 72 bp | GTCTGCTGGTCACCCTTGTGGTCCCGAGGCCGGCGCTaGTTGGGTGCTGGGCCCGGCCTCCCAGGGCGTGTG | + |
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Preference number: 3 (lower is better) Translates to: VCWSPLWSRGRR*LGAGPGLPGRV Trigger: CACACGCCCTGGGAGGCCGGGCCCAGCACCCAACCAGCGCCGGCCTCGGGACCACAAGGGTGACCAGCAGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR GCA 72 bp | CTAGTCCACAGCCATGGCGGGCGGGCAGGCGGGCGGTaGTGGGGCACCTGGGGTGGGTGGGATGACCAAACC | + |
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Preference number: 3 (lower is better) Translates to: LVHSHGGRAGGR*WGTWGGWDDQT Trigger: GGTTTGGTCATCCCACCCACCCCAGGTGCCCCAGCACCGCCCGCCTGCCCGCCCGCCATGGCTGTGGACTAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR GCA 72 bp | CCTCCAAACAGGAGCGGCCATGGCCAAGTCCAAGCCTaGCCGCAGCCTGGGGCCCGCCAGGTACTGCCGGCC | + |
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Preference number: 3 (lower is better) Translates to: PPNRSGHGQVQA*PQPGARQVLPA Trigger: GGCCGGCAGTACCTGGCGGGCCCCAGGCTGCGGGCAGGCTTGGACTTGGCCATGGCCGCTCCTGTTTGGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CCA 72 bp | GCTGGTTGGGTGCTGGGCCCGGCCTCCCAGGGCGTGTaGCGGGCTGGGCCTGGCGACAGTTCTGCTGACTCT | + |
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Preference number: 3 (lower is better) Translates to: AGWVLGPASQGV*RAGPGDSSADS Trigger: AGAGTCAGCAGAACTGTCGCCAGGCCCAGCCCGCCACACGCCCTGGGAGGCCGGGCCCAGCACCCAACCAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CCA 72 bp | GGGACCCACGTGCACACCTCCAAACAGGAGCGGCCATaGCCAAGTCCAAGCCTGCCCGCAGCCTGGGGCCCG | + |
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Preference number: 3 (lower is better) Translates to: GTHVHTSKQERP*PSPSLPAAWGP Trigger: CGGGCCCCAGGCTGCGGGCAGGCTTGGACTTGGCCATGGCCGCTCCTGTTTGGAGGTGTGCACGTGGGTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR TCA 72 bp | GGGCGTGTGGCGGGCTGGGCCTGGCGACAGTTCTGCTaGCTCTCCACAGACCATGCATGGCCGCACGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: GRVAGWAWRQFC*LSTDHAWPHVA Trigger: AGCCACGTGCGGCCATGCATGGTCTGTGGAGAGTCAGCAGAACTGTCGCCAGGCCCAGCCCGCCACACGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CCA 72 bp | GGAGCAGTTTGTTCCTGGGTCTGCTGGTCACCCTTGTaGTCCCGAGGCCGGCGCTGGTTGGGTGCTGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GAVCSWVCWSPL*SRGRRWLGAGP Trigger: GGGCCCAGCACCCAACCAGCGCCGGCCTCGGGACCACAAGGGTGACCAGCAGACCCAGGAACAAACTGCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CCA 72 bp | TTAAGACGGACTGAAGGTGCCTGCCTGCTGGGGACATaGGACCCACGTGCACACCTCCAAACAGGAGCGGCC | + |
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Preference number: 3 (lower is better) Translates to: LRRTEGACLLGT*DPRAHLQTGAA Trigger: GGCCGCTCCTGTTTGGAGGTGTGCACGTGGGTCCCATGTCCCCAGCAGGCAGGCACCTTCAGTCCGTCTTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR TCA 72 bp | GCCGTTGAACATTTGGAGGGTGAGGTTAAGACGGACTaGAGGTGCCTGCCTGCTGGGGACATGGGACCCACG | + |
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Preference number: 3 (lower is better) Translates to: AVEHLEGEVKTD*RCLPAGDMGPT Trigger: CGTGGGTCCCATGTCCCCAGCAGGCAGGCACCTTCAGTCCGTCTTAACCTCACCCTCCAAATGTTCAACGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CAA 72 bp | TGCTGGTCACCCTTGTGGTCCCGAGGCCGGCGCTGGTaGGGTGCTGGGCCCGGCCTCCCAGGGCGTGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: CWSPLWSRGRRW*GAGPGLPGRVA Trigger: CGCCACACGCCCTGGGAGGCCGGGCCCAGCACCCAACCAGCGCCGGCCTCGGGACCACAAGGGTGACCAGCA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR GCA 90 bp | TCCAAGCCTGCCCGCAGCCTGGGGCCCGCCAGGTACTGCCGGCCGCCACGGGCAGTAGGGACACCTTCATaGCGGCCAGTGGCCCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SKPARSLGPARYCRPPRAVGTPS*RPVARR Trigger: CCGCCGGGCCACTGGCCGGCATGAAGGTGTCCCTAC...TGCCCGTGGCGGCCGGCAGTACCTGGCGGGCCCCAGGCTGCGGGCAGGCTTGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR TCA 90 bp | GGCGCTGGTTGGGTGCTGGGCCCGGCCTCCCAGGGCGTGTGGCGGGCTGGGCCTCCACGTGTTCCTCTGTaGCTGGGACCGTGGGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GAGWVLGPASQGVWRAGPPRVPL*LGPWGE Trigger: CTCTCCCCACGGTCCCAGTCACAGAGGAACACGTGG...AGGCCCAGCCCGCCACACGCCCTGGGAGGCCGGGCCCAGCACCCAACCAGCGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR TCA 90 bp | AAGCCTGCCCGCAGCCTGGGGCCCGCCAGGTACTGCCGGCCGCCACGGGCAGCACGAGCTGGAGGAGGATaGGGACGAGGACGAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: KPARSLGPARYCRPPRAARAGGG*GRGRGE Trigger: TTCTCCTCGTCCTCGTCCTCATCCTCCTCCAGCTCG...TGCTGCCCGTGGCGGCCGGCAGTACCTGGCGGGCCCCAGGCTGCGGGCAGGCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR GCA 90 bp | CCGGCCGCCACGGGCAGCACCTCTAGTCCACAGCCATGGCGGGCGGGCAGGCGGCCAGCCAGGGCACGATaGAGCTGTCGTGGAACAGGT | + |
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Preference number: 4 (lower is better) Translates to: PAATGSTSSPQPWRAGRRPARAR*SCRGTG Trigger: ACCTGTTCCACGACAGCTGCATCGTGCCCTGGCTGG...CCGCCTGCCCGCCCGCCATGGCTGTGGACTAGAGGTGCTGCCCGTGGCGGCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | TCCAAACAGGAGCGGCCATGGCCAAGTCCAAGCCTGCCCGCAGCCTGGGGCCCGGCCGGTTCTGGTCGGTaGGGGCTGTGGAGGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SKQERPWPSPSLPAAWGPAGSGR*GLWRGL Trigger: CAGCCCCCTCCACAGCCCCCACCGACCAGAACCGGC...CGGGCCCCAGGCTGCGGGCAGGCTTGGACTTGGCCATGGCCGCTCCTGTTTGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | GCCACGGGCAGCACCTCTAGTCCACAGCCATGGCGGGCGGGCAGGCGGGCGGTGCTGCCATCATCGGCCTaGGCTCCAGGAGGGAACGTG | + |
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Preference number: 4 (lower is better) Translates to: ATGSTSSPQPWRAGRRAVLPSSA*APGGNV Trigger: CACGTTCCCTCCTGGAGCCCAGGCCGATGATGGCAG...CACCGCCCGCCTGCCCGCCCGCCATGGCTGTGGACTAGAGGTGCTGCCCGTGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR TCA 90 bp | AAGTCCAAGCCTGCCCGCAGCCTGGGGCCCGCCAGGTACTGCCGGCCGCCACGGGGCTGTGGAGGGGGCTaGGCCATTCTCTGTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: KSKPARSLGPARYCRPPRGCGGG*AILCVP Trigger: AGGAACACAGAGAATGGCTCAGCCCCCTCCACAGCC...CCGTGGCGGCCGGCAGTACCTGGCGGGCCCCAGGCTGCGGGCAGGCTTGGACTT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | GCCACGGGCAGCACCTCTAGTCCACAGCCATGGCGGGCGGGCAGGCGGGCGGTGCATTGCTGGGCGAGCTaGAGGAGGATGAGGACGAGG | + |
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Preference number: 4 (lower is better) Translates to: ATGSTSSPQPWRAGRRAVHCWAS*RRMRTR Trigger: CCTCGTCCTCATCCTCCTCCAGCTCGCCCAGCAATG...CACCGCCCGCCTGCCCGCCCGCCATGGCTGTGGACTAGAGGTGCTGCCCGTGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR TCA 90 bp | AAGTCCAAGCCTGCCCGCAGCCTGGGGCCCGCCAGGTACTGCCGGCCGCCACGGCTGTGTTCTGTCCAGTaGGGCTCTTACGGCAGACCG | + |
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Preference number: 4 (lower is better) Translates to: KSKPARSLGPARYCRPPRLCSVQ*GSYGRP Trigger: CGGTCTGCCGTAAGAGCCTCACTGGACAGAACACAG...CCGTGGCGGCCGGCAGTACCTGGCGGGCCCCAGGCTGCGGGCAGGCTTGGACTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | AAGTCCAAGCCTGCCCGCAGCCTGGGGCCCGCCAGGTACTGCCGGCCGCCACGGGCCAGACTCGCACCTTaGGCAGATGTAATCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KSKPARSLGPARYCRPPRARLAP*ADVIRQ Trigger: CTGCCGGATTACATCTGCCCAAGGTGCGAGTCTGGC...CCGTGGCGGCCGGCAGTACCTGGCGGGCCCCAGGCTGCGGGCAGGCTTGGACTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | TCCAAACAGGAGCGGCCATGGCCAAGTCCAAGCCTGCCCGCAGCCTGGGGCCCGGACCAAGGCCCAGGCTaGGCACAGCAGCCGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SKQERPWPSPSLPAAWGPDQGPG*AQQPER Trigger: TCTCTCCGGCTGCTGTGCCCAGCCTGGGCCTTGGTC...CGGGCCCCAGGCTGCGGGCAGGCTTGGACTTGGCCATGGCCGCTCCTGTTTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | CCGGCCGCCACGGGCAGCACCTCTAGTCCACAGCCATGGCGGGCGGGCAGGCGGCCATTCACGAGCTGCTaGATGATCCCTTCCAGCGTA | + |
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Preference number: 4 (lower is better) Translates to: PAATGSTSSPQPWRAGRRPFTSC*MIPSSV Trigger: TACGCTGGAAGGGATCATCCAGCAGCTCGTGAATGG...CCGCCTGCCCGCCCGCCATGGCTGTGGACTAGAGGTGCTGCCCGTGGCGGCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR TCA 90 bp | TCCAAACAGGAGCGGCCATGGCCAAGTCCAAGCCTGCCCGCAGCCTGGGGCCCGTGGGCACTCAAGCCCTaGGCCCACGTGTTCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SKQERPWPSPSLPAAWGPWALKP*AHVFLC Trigger: ACAGAGGAACACGTGGGCTCAGGGCTTGAGTGCCCA...CGGGCCCCAGGCTGCGGGCAGGCTTGGACTTGGCCATGGCCGCTCCTGTTTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | GGCGCTGGTTGGGTGCTGGGCCCGGCCTCCCAGGGCGTGTGGCGGGCTGGGCCTCATTCTCTGTGTTCCTaGTCTCTTCTGGAAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GAGWVLGPASQGVWRAGPHSLCS*SLLEAP Trigger: AGGAGCTTCCAGAAGAGACCAGGAACACAGAGAATG...AGGCCCAGCCCGCCACACGCCCTGGGAGGCCGGGCCCAGCACCCAACCAGCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | GCCACGGGCAGCACCTCTAGTCCACAGCCATGGCGGGCGGGCAGGCGGGCGGTGATGCCAAAGGCAAACTaGCTGTATCCCTGTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ATGSTSSPQPWRAGRRAVMPKAN*LYPCGS Trigger: GCTGCCACAGGGATACAGCCAGTTTGCCTTTGGCAT...CACCGCCCGCCTGCCCGCCCGCCATGGCTGTGGACTAGAGGTGCTGCCCGTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| 3UTR CAA 72 bp | GCTGGAGCAGTTTGTTCCTGGGTCTGCTGGTCACCCTaGTGGTCCCGAGGCCGGCGCTGGTTGGGTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AGAVCSWVCWSP*WSRGRRWLGAG Trigger: CCCAGCACCCAACCAGCGCCGGCCTCGGGACCACAAGGGTGACCAGCAGACCCAGGAACAAACTGCTCCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR TCA 90 bp | CCTCCAAACAGGAGCGGCCATGGCCAAGTCCAAGCCTGCCCGCAGCCTGGGGCCCTGGAAGCTCCTCAATaGAGCCAGACTCGCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: PPNRSGHGQVQACPQPGALEAPQ*SQTRTL Trigger: CAAGGTGCGAGTCTGGCTTCATTGAGGAGCTTCCAG...GGCCCCAGGCTGCGGGCAGGCTTGGACTTGGCCATGGCCGCTCCTGTTTGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR GCA 90 bp | AAGTCCAAGCCTGCCCGCAGCCTGGGGCCCGCCAGGTACTGCCGGCCGCCACGGAGCTATCGTCGAAGATaGCAAAGGCAAACTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KSKPARSLGPARYCRPPRSYRRR*QRQTGC Trigger: ACAGCCAGTTTGCCTTTGGCATCTTCGACGATAGCT...CCGTGGCGGCCGGCAGTACCTGGCGGGCCCCAGGCTGCGGGCAGGCTTGGACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR GCA 90 bp | GTGTGGCGGGCTGGGCCTGGCGACAGTTCTGCTGACTCTCCACAGACCATGCATACCGGGCAGCTGTCATaGTGCTCCAGCCAGGGCACG | + |
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Preference number: 4 (lower is better) Translates to: VWRAGPGDSSADSPQTMHTGQLS*CSSQGT Trigger: CGTGCCCTGGCTGGAGCAGCATGACAGCTGCCCGGT...ATGCATGGTCTGTGGAGAGTCAGCAGAACTGTCGCCAGGCCCAGCCCGCCACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR GCA 90 bp | GTGAGGTTAAGACGGACTGAAGGTGCCTGCCTGCTGGGGACATGGGACCCACGTGGCTCTCAGGGTCCCTaGCATCATCGGCCTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VRLRRTEGACLLGTWDPRGSQGP*HHRPGL Trigger: GAGCCCAGGCCGATGATGGCAGGGACCCTGAGAGCC...ACGTGGGTCCCATGTCCCCAGCAGGCAGGCACCTTCAGTCCGTCTTAACCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | GTGAGGTTAAGACGGACTGAAGGTGCCTGCCTGCTGGGGACATGGGACCCACGTGGTCGGTGGGGGCTGTaGAGGGGGCTGAGCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: VRLRRTEGACLLGTWDPRGRWGL*RGLSHS Trigger: AGAATGGCTCAGCCCCCTCCACAGCCCCCACCGACC...ACGTGGGTCCCATGTCCCCAGCAGGCAGGCACCTTCAGTCCGTCTTAACCTCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | GCTGGAGCAGTTTGTTCCTGGGTCTGCTGGTCACCCTTGTGGTCCCGAGGCCGGTACCGATGCCGAGACTaGTGCTCTCTCTCCCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: AGAVCSWVCWSPLWSRGRYRCRD*CSLSRR Trigger: CCGACGGGAGAGAGAGCACCAGTCTCGGCATCGGTA...CCGGCCTCGGGACCACAAGGGTGACCAGCAGACCCAGGAACAAACTGCTCCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | GTGTGGCGGGCTGGGCCTGGCGACAGTTCTGCTGACTCTCCACAGACCATGCATTCTACCGAGCAGCAGTaGCAGAAGTACCGTCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: VWRAGPGDSSADSPQTMHSTEQQ*QKYRPG Trigger: GCCCGGACGGTACTTCTGCCACTGCTGCTCGGTAGA...ATGCATGGTCTGTGGAGAGTCAGCAGAACTGTCGCCAGGCCCAGCCCGCCACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR GCA 90 bp | GCTGGAGCAGTTTGTTCCTGGGTCTGCTGGTCACCCTTGTGGTCCCGAGGCCGGATGCCATTCACGAGCTaGTGGATGATCCCTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AGAVCSWVCWSPLWSRGRMPFTS*WMIPSS Trigger: GCTGGAAGGGATCATCCAGCAGCTCGTGAATGGCAT...CCGGCCTCGGGACCACAAGGGTGACCAGCAGACCCAGGAACAAACTGCTCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR GCA 90 bp | CCTCCAAACAGGAGCGGCCATGGCCAAGTCCAAGCCTGCCCGCAGCCTGGGGCCCACACTCTCACCCAGTaGATAGTCTTCTTTACACAC | + |
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Preference number: 4 (lower is better) Translates to: PPNRSGHGQVQACPQPGAHTLTQ*IVFFTH Trigger: GTGTGTAAAGAAGACTATGCACTGGGTGAGAGTGTG...GGCCCCAGGCTGCGGGCAGGCTTGGACTTGGCCATGGCCGCTCCTGTTTGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR GCA 90 bp | GTGAGGTTAAGACGGACTGAAGGTGCCTGCCTGCTGGGGACATGGGACCCACGTTGGTTGCAGGGCAACTaGCGCACACTCTCACCCAGT | + |
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Preference number: 4 (lower is better) Translates to: VRLRRTEGACLLGTWDPRWLQGN*RTLSPS Trigger: ACTGGGTGAGAGTGTGCGGCAGTTGCCCTGCAACCA...ACGTGGGTCCCATGTCCCCAGCAGGCAGGCACCTTCAGTCCGTCTTAACCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR GCA 90 bp | AACATTTGGAGGGTGAGGTTAAGACGGACTGAAGGTGCCTGCCTGCTGGGGACACGATGCCGAGACTGGTaGTCTCTCTCCCGTCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: NIWRVRLRRTEGACLLGTRCRDW*SLSRRL Trigger: GAGCCGACGGGAGAGAGAGCACCAGTCTCGGCATCG...TGTCCCCAGCAGGCAGGCACCTTCAGTCCGTCTTAACCTCACCCTCCAAATGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | GTGTGGCGGGCTGGGCCTGGCGACAGTTCTGCTGACTCTCCACAGACCATGCATGTCCACATTCTCAAATaGCTGCCGGTTCTGGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: VWRAGPGDSSADSPQTMHVHILK*LPVLVG Trigger: ACCGACCAGAACCGGCAGCCATTTGAGAATGTGGAC...ATGCATGGTCTGTGGAGAGTCAGCAGAACTGTCGCCAGGCCCAGCCCGCCACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR GCA 90 bp | GTGTGGCGGGCTGGGCCTGGCGACAGTTCTGCTGACTCTCCACAGACCATGCATGGCAGCGTGAACAGGTaGTGGTCCACATTCTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: VWRAGPGDSSADSPQTMHGSVNR*WSTFSN Trigger: ATTTGAGAATGTGGACCAGCACCTGTTCACGCTGCC...ATGCATGGTCTGTGGAGAGTCAGCAGAACTGTCGCCAGGCCCAGCCCGCCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | GTGTGGCGGGCTGGGCCTGGCGACAGTTCTGCTGACTCTCCACAGACCATGCATAGCGTGAACAGGTGCTaGTCCACATTCTCAAATGGC | + |
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Preference number: 4 (lower is better) Translates to: VWRAGPGDSSADSPQTMHSVNRC*STFSNG Trigger: GCCATTTGAGAATGTGGACCAGCACCTGTTCACGCT...ATGCATGGTCTGTGGAGAGTCAGCAGAACTGTCGCCAGGCCCAGCCCGCCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | GTGTGGCGGGCTGGGCCTGGCGACAGTTCTGCTGACTCTCCACAGACCATGCATCTCCAGGAGGGAACGTaGGAATCTCAAAGCTATCGT | + |
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Preference number: 4 (lower is better) Translates to: VWRAGPGDSSADSPQTMHLQEGT*ESQSYR Trigger: ACGATAGCTTTGAGATTCCCACGTTCCCTCCTGGAG...ATGCATGGTCTGTGGAGAGTCAGCAGAACTGTCGCCAGGCCCAGCCCGCCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CCA 90 bp | AACATTTGGAGGGTGAGGTTAAGACGGACTGAAGGTGCCTGCCTGCTGGGGACATCAAGCCTGGGGGATTaGTGGCTGTGTTCTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: NIWRVRLRRTEGACLLGTSSLGD*WLCSVQ Trigger: CTGGACAGAACACAGCCACCAATCCCCCAGGCTTGA...TGTCCCCAGCAGGCAGGCACCTTCAGTCCGTCTTAACCTCACCCTCCAAATGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS GCA 90 bp | TCATGCCGGCCAGTGGCCCGGCGGGCAGTGAGGCGGGCACGGGGCTaGCGGGCCCCGTACCGATGCCGAGACTGGTGCTCTCTCTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: SCRPVARRAVRRARG*RAPYRCRDWCSLSR Trigger: ACGGGAGAGAGAGCACCAGTCTCGGCATCGGTACGGGGCCCGGCAGCCCCGTGCCCGCCTCACTGCCCGCCGGGCCACTGGCCGGCATGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CAA 90 bp | AGGAGCGGCCATGGCCAAGTCCAAGCCTGCCCGCAGCCTGGGGCCCGCCAGGTAAGCCAGACTCGCACCTaGGGCAGATGTAATCCGGCA | + |
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Preference number: 5 (lower is better) Translates to: RSGHGQVQACPQPGARQVSQTRT*GRCNPA Trigger: TGCCGGATTACATCTGCCCAAGGTGCGAGTCTGGCT...TACCTGGCGGGCCCCAGGCTGCGGGCAGGCTTGGACTTGGCCATGGCCGCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS-3UTR CAA 90 bp | GTGTGGCGGGCTGGGCCTGGCGACAGTTCTGCTGACTCTCCACAGACCATGCATGTCAAGCCTGGGGGATaGGTGGCTGTGTTCTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: VWRAGPGDSSADSPQTMHVKPGG*VAVFCP Trigger: TGGACAGAACACAGCCACCAATCCCCCAGGCTTGAC...ATGCATGGTCTGTGGAGAGTCAGCAGAACTGTCGCCAGGCCCAGCCCGCCACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS CCA 90 bp | GGTCCACATTCTCAAATGGCTGCCGGTTCTGGTCGGTGGGGGCTGTaGAGGGGGCTGAGCCATTCTCTGTGTTCCTGGTCTCTTCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: GPHSQMAAGSGRWGL*RGLSHSLCSWSLLE Trigger: TTCCAGAAGAGACCAGGAACACAGAGAATGGCTCAGCCCCCTCCACAGCCCCCACCGACCAGAACCGGCAGCCATTTGAGAATGTGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS GCA 72 bp | CCAGTGGCCCGGCGGGCAGTGAGGCGGGCACGGGGCTaGCGGGCCCCGTACCGATGCCGAGACTGGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PVARRAVRRARG*RAPYRCRDWCS Trigger: AGAGCACCAGTCTCGGCATCGGTACGGGGCCCGGCAGCCCCGTGCCCGCCTCACTGCCCGCCGGGCCACTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS CCA 72 bp | TCTCAAATGGCTGCCGGTTCTGGTCGGTGGGGGCTGTaGAGGGGGCTGAGCCATTCTCTGTGTTCCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SQMAAGSGRWGL*RGLSHSLCSWS Trigger: AGACCAGGAACACAGAGAATGGCTCAGCCCCCTCCACAGCCCCCACCGACCAGAACCGGCAGCCATTTGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS CCA 72 bp | GGACGAGGACGAGGAGAAACCTACACCGGTCAAGCCTaGGGGATTGGTGGCTGTGTTCTGTCCAGTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: GRGRGETYTGQA*GIGGCVLSSEA Trigger: AGCCTCACTGGACAGAACACAGCCACCAATCCCCCAGGCTTGACCGGTGTAGGTTTCTCCTCGTCCTCGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS GCA 72 bp | GGCACAGCAGCCGGAGAGATGATGCCATTCACGAGCTaGTGGATGATCCCTTCCAGCGTAGGGACACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GTAAGEMMPFTS*WMIPSSVGTPS Trigger: TGAAGGTGTCCCTACGCTGGAAGGGATCATCCAGCAGCTCGTGAATGGCATCATCTCTCCGGCTGCTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS CAA 72 bp | GACGAGGAGAAACCTACACCGGTCAAGCCTGGGGGATaGGTGGCTGTGTTCTGTCCAGTGAGGCTCTTACGG | + |
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Preference number: 6 (lower is better) Translates to: DEEKPTPVKPGG*VAVFCPVRLLR Trigger: CCGTAAGAGCCTCACTGGACAGAACACAGCCACCAATCCCCCAGGCTTGACCGGTGTAGGTTTCTCCTCGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS TCA 72 bp | TGCATAGTCTTCTTTACACACTGGGCACTCAAGCCCTaGGCCCACGTGTTCCTCTGTGACTGGGACCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: CIVFFTHWALKP*AHVFLCDWDRG Trigger: CCCACGGTCCCAGTCACAGAGGAACACGTGGGCTCAGGGCTTGAGTGCCCAGTGTGTAAAGAAGACTATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS GCA 72 bp | GTGGTTGCAGGGCAACTGCCGCACACTCTCACCCAGTaGATAGTCTTCTTTACACACTGGGCACTCAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: VVAGQLPHTLTQ*IVFFTHWALKP Trigger: GGGCTTGAGTGCCCAGTGTGTAAAGAAGACTATGCACTGGGTGAGAGTGTGCGGCAGTTGCCCTGCAACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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| CDS GCA 72 bp | GAGGGAACGTGGGAATCTCAAAGCTATCGTCGAAGATaGCAAAGGCAAACTGGCTGTATCCCTGTGGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: EGTWESQSYRRR*QRQTGCIPVAA Trigger: CGCTGCCACAGGGATACAGCCAGTTTGCCTTTGGCATCTTCGACGATAGCTTTGAGATTCCCACGTTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047203.9 |
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