Pregenerated sensors for RNF122 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039328Ensembl transcript IDs: ENSMUST00000046941.8, ENSMUST00000217278.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGAAGCCCTGGGAGGCGGAGACTGGACAAGTCTGGTACTGGTCCTaGGGTGCTGGGAGAAGCTCGGCTCTGTCATCCTTGCCTTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: EKPWEAETGQVWYWS*GAGRSSALSSLPLG Trigger: ACCTAAAGGCAAGGATGACAGAGCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAGACTTGTCCAGTCTCCGCCTCCCAGGGCTTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR CCA 90 bp | ATGGATAACGGAGAGAAGCCCTGGGAGGCGGAGACTGGACAAGTCTaGTACTGGTCCTGCGGTGCTGGGAGAAGCTCGGCTCTGTCATCC | + |
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Preference number: 1 (lower is better) Translates to: MDNGEKPWEAETGQV*YWSCGAGRSSALSS Trigger: GGATGACAGAGCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAGACTTGTCCAGTCTCCGCCTCCCAGGGCTTCTCTCCGTTATCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR TCA 90 bp | GTTCATGGTCACAGTCACCCAGTGGACTCCTTCCCAGGGCAAAGATaGGGTGGGTGGAGATGGCTGGATGGACGGTCAGTCCAGTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: VHGHSHPVDSFPGQR*GGWRWLDGRSVQCQ Trigger: CTGGCACTGGACTGACCGTCCATCCAGCCATCTCCACCCACCTCATCTTTGCCCTGGGAAGGAGTCCACTGGGTGACTGTGACCATGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR TCA 90 bp | GCAAATGGCTTTCCTGAGCTCAGCACCCAAGGCGTGCTGCCTGCTTaGCTGGCATCGATTTGTGCTCCCAAGCAAGGGCCAACCAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: ANGFPELSTQGVLPA*LASICAPKQGPTRV Trigger: GACCCTGGTTGGCCCTTGCTTGGGAGCACAAATCGATGCCAGTCAAGCAGGCAGCACGCCTTGGGTGCTGAGCTCAGGAAAGCCATTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR CCA 90 bp | GACAGCAGGCCCCTTGGGAAACTGGCAAAGCTAAGCTGGAGGCTGTaGGTGGAGGATCTGGATGCACGCAGGGTCATACCTGTTGCTACC | + |
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Preference number: 1 (lower is better) Translates to: DSRPLGKLAKLSWRL*VEDLDARRVIPVAT Trigger: GGTAGCAACAGGTATGACCCTGCGTGCATCCAGATCCTCCACCCACAGCCTCCAGCTTAGCTTTGCCAGTTTCCCAAGGGGCCTGCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR CCA 90 bp | ATGGCTTTCCTGAGCTCAGCACCCAAGGCGTGCTGCCTGCTTGACTaGCATCGATTTGTGCTCCCAAGCAAGGGCCAACCAGGGTCTAGT | + |
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Preference number: 1 (lower is better) Translates to: MAFLSSAPKACCLLD*HRFVLPSKGQPGSS Trigger: ACTAGACCCTGGTTGGCCCTTGCTTGGGAGCACAAATCGATGCCAGTCAAGCAGGCAGCACGCCTTGGGTGCTGAGCTCAGGAAAGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR GCA 90 bp | CATGCTCAGCAAATGGCTTTCCTGAGCTCAGCACCCAAGGCGTGCTaGCTGCTTGACTGGCATCGATTTGTGCTCCCAAGCAAGGGCCAA | + |
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Preference number: 1 (lower is better) Translates to: HAQQMAFLSSAPKAC*LLDWHRFVLPSKGQ Trigger: TTGGCCCTTGCTTGGGAGCACAAATCGATGCCAGTCAAGCAGGCAGCACGCCTTGGGTGCTGAGCTCAGGAAAGCCATTTGCTGAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR GCA 90 bp | AACCATGCTCAGCAAATGGCTTTCCTGAGCTCAGCACCCAAGGCGTaGTGCCTGCTTGACTGGCATCGATTTGTGCTCCCAAGCAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: NHAQQMAFLSSAPKA*CLLDWHRFVLPSKG Trigger: GCCCTTGCTTGGGAGCACAAATCGATGCCAGTCAAGCAGGCAGCACGCCTTGGGTGCTGAGCTCAGGAAAGCCATTTGCTGAGCATGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR CCA 90 bp | ATGTGCCAGGGAGGGACTGTCAGCGACACAGGATTAGTAAAGAGATaGGGTGCCAGGGTAGCTACATGGGCCTCTGAGGTCGCCAGATCA | + |
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Preference number: 1 (lower is better) Translates to: MCQGGTVSDTGLVKR*GARVATWASEVARS Trigger: TGATCTGGCGACCTCAGAGGCCCATGTAGCTACCCTGGCACCCCATCTCTTTACTAATCCTGTGTCGCTGACAGTCCCTCCCTGGCACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR TCA 90 bp | TCTCCTTTCCCTTGGAAACCATCCCAAGGAAAGCTCTGGCAGGAGTaGAGGACATGGGTGGGGCAGAGCCTTTCAAGGTCAGAGTCGCTT | + |
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Preference number: 1 (lower is better) Translates to: SPFPWKPSQGKLWQE*RTWVGQSLSRSESL Trigger: AAGCGACTCTGACCTTGAAAGGCTCTGCCCCACCCATGTCCTTCACTCCTGCCAGAGCTTTCCTTGGGATGGTTTCCAAGGGAAAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR TCA 90 bp | AGAAAGGTGTTCCCAACACCATCCCATTCTGATCGCACTCACTGTTaGCAGCAGGCCCCTTGGGAAACTGGCAAAGCTAAGCTGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: RKVFPTPSHSDRTHC*QQAPWETGKAKLEA Trigger: AGCCTCCAGCTTAGCTTTGCCAGTTTCCCAAGGGGCCTGCTGTCAACAGTGAGTGCGATCAGAATGGGATGGTGTTGGGAACACCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR TCA 90 bp | ATGAGGTGGGAGATACAAAGCCAACCTGATTACTTTCTCCACCAGTaGATCCACCTGCAGCAGGAACTGAGGGGTAGGCTGAAATCGGCT | + |
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Preference number: 1 (lower is better) Translates to: MRWEIQSQPDYFLHQ*IHLQQELRGRLKSA Trigger: AGCCGATTTCAGCCTACCCCTCAGTTCCTGCTGCAGGTGGATTCACTGGTGGAGAAAGTAATCAGGTTGGCTTTGTATCTCCCACCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR TCA 90 bp | AGGATTAGTAAAGAGATGGGGTGCCAGGGTAGCTACATGGGCCTCTaGGGTCGCCAGATCACTGACAATCAACCACCAGGTAGAATTCAA | + |
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Preference number: 1 (lower is better) Translates to: RISKEMGCQGSYMGL*GRQITDNQPPGRIQ Trigger: TTGAATTCTACCTGGTGGTTGATTGTCAGTGATCTGGCGACCTCAGAGGCCCATGTAGCTACCCTGGCACCCCATCTCTTTACTAATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR GCA 90 bp | GAGCCCATAGTCAGGTACCCAATTACACCTTGGTGTTGTCCAAGATaGATAAGACAATGGCTGAGTAAGACAGCACTATACCTACTCCAG | + |
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Preference number: 1 (lower is better) Translates to: EPIVRYPITPWCCPR*IRQWLSKTALYLLQ Trigger: CTGGAGTAGGTATAGTGCTGTCTTACTCAGCCATTGTCTTATGCATCTTGGACAACACCAAGGTGTAATTGGGTACCTGACTATGGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR CCA 90 bp | TATGTAAATAAAGTTCAGGGTGCTTACTCTATCCAATCCTGTTCCTaGCTTCCACACAGTACTTCCTCCCTTTATGTTCTAACCTACTGT | + |
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Preference number: 1 (lower is better) Translates to: YVNKVQGAYSIQSCS*LPHSTSSLYVLTYC Trigger: ACAGTAGGTTAGAACATAAAGGGAGGAAGTACTGTGTGGAAGCCAGGAACAGGATTGGATAGAGTAAGCACCCTGAACTTTATTTACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTCCCATCACCCTGCAGTCAGCCAGGGCGAGGCTGGCCTTTGTTTCCGGCATTTCCCAGGGCAAAGATaGGGTGGGTGGAGATGGCTG | + |
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Preference number: 2 (lower is better) Translates to: WSHHPAVSQGEAGLCFRHFPGQR*GGWRWL Trigger: CAGCCATCTCCACCCACCTCATCTTTGCCCTGGGAA...ATGCCGGAAACAAAGGCCAGCCTCGCCCTGGCTGACTGCAGGGTGATGGGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGGCTGGTCCCATCACCCTGCAGTCAGCCAGGGCGAGGCTGGCCTTTGTTTCGGGCCCTGCTTTCCTTaGCTTCACACAGAGCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: EGWSHHPAVSQGEAGLCFGPCFP*LHTEPF Trigger: GAAAGGCTCTGTGTGAAGTCAAGGAAAGCAGGGCCC...GAAACAAAGGCCAGCCTCGCCCTGGCTGACTGCAGGGTGATGGGACCAGCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGTCCCATCACCCTGCAGTCAGCCAGGGCGAGGCTGGCCTTTGTTTCCGAGTGAAGGACATGGGTaGGGCAGAGCCTTTCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: GLVPSPCSQPGRGWPLFPSEGHG*GRAFQG Trigger: ACCTTGAAAGGCTCTGCCCCACCCATGTCCTTCACT...CGGAAACAAAGGCCAGCCTCGCCCTGGCTGACTGCAGGGTGATGGGACCAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGTCCCATCACCCTGCAGTCAGCCAGGGCGAGGCTGGCCTTTGTTTCCGTTCTCTCCTTTCCCTTaGAAACCATCCCAAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: GLVPSPCSQPGRGWPLFPFSPFP*KPSQGK Trigger: CTTTCCTTGGGATGGTTTCCAAGGGAAAGGAGAGAA...CGGAAACAAAGGCCAGCCTCGCCCTGGCTGACTGCAGGGTGATGGGACCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCCATCACCCTGCAGTCAGCCAGGGCGAGGCTGGCCTTTGTTTCCGGCATCAGAGCCTTTCGTCTTaGTTTCTTGATCTTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: WSHHPAVSQGEAGLCFRHQSLSS*FLDLSL Trigger: GAGAGAAAGATCAAGAAACCAAGACGAAAGGCTCTG...ATGCCGGAAACAAAGGCCAGCCTCGCCCTGGCTGACTGCAGGGTGATGGGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR CAA 90 bp | GGAGGCTGTGGGTGGAGGATCTGGATGCACGCAGGGTCATACCTGTaGCTACCACATGGAATTCTAGATGTGTGTAGGAGGCTAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: GGCGWRIWMHAGSYL*LPHGILDVCRRLGC Trigger: ACATCCTAGCCTCCTACACACATCTAGAATTCCATGTGGTAGCAACAGGTATGACCCTGCGTGCATCCAGATCCTCCACCCACAGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR CAA 90 bp | TGGTACTGGTCCTGCGGTGCTGGGAGAAGCTCGGCTCTGTCATCCTaGCCTTTAGGTGTGTGTGAGTCTTGTTCATTGTGTAGAGAAACC | + |
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Preference number: 2 (lower is better) Translates to: WYWSCGAGRSSALSS*PLGVCESCSLCRET Trigger: GGTTTCTCTACACAATGAACAAGACTCACACACACCTAAAGGCAAGGATGACAGAGCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR-3UTR TCA 90 bp | GATTATGTGAGCTTGCCACCCAAGCACAGTGCTCACACCATTTCGCCAAGGTCAGGGCCAGGGAGAGAATaGATAGCACCTCAGATCCTA | + |
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Preference number: 2 (lower is better) Translates to: DYVSLPPKHSAHTISPRSGPGRE*IAPQIL Trigger: TAGGATCTGAGGTGCTATTCATTCTCTCCCTGGCCC...TGACCTTGGCGAAATGGTGTGAGCACTGTGCTTGGGTGGCAAGCTCACATAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR-3UTR GCA 90 bp | GAACCCTCCCAGTTGCAAGGAGAGATGATGAGGTGGGAGATACAAAGCCAACCTACTGGCATCGATTTGTaGTCCCAAGCAAGGGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: EPSQLQGEMMRWEIQSQPTGIDL*SQARAN Trigger: GTTGGCCCTTGCTTGGGAGCACAAATCGATGCCAGT...AGGTTGGCTTTGTATCTCCCACCTCATCATCTCTCCTTGCAACTGGGAGGGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCTCCTTTCCCTTGGAAACCATCCCAAGGAAAGCTCTGGCAGGAGTGAAGAGGGCAAAGATGAGGTaGGTGGAGATGGCTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: FLSFPLETIPRKALAGVKRAKMR*VEMAGW Trigger: CCATCCAGCCATCTCCACCCACCTCATCTTTGCCCT...CTTCACTCCTGCCAGAGCTTTCCTTGGGATGGTTTCCAAGGGAAAGGAGAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGGTAGCTTTTTCACAGCTGACATCAATCCAAACCATGCTCAGCAAATGGCTAAGCTCTGGCAGGAGTaGAGGACATGGGTGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: MGSFFTADINPNHAQQMAKLWQE*RTWVGQ Trigger: CTGCCCCACCCATGTCCTTCACTCCTGCCAGAGCTT...AGCCATTTGCTGAGCATGGTTTGGATTGATGTCAGCTGTGAAAAAGCTACCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR CAA 90 bp | CACAGAGCCTTTCGTCTTGGTTTCTTGATCTTTCTCTCCTTTCCCTaGGAAACCATCCCAAGGAAAGCTCTGGCAGGAGTGAAGGACATG | + |
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Preference number: 2 (lower is better) Translates to: HRAFRLGFLIFLSFP*ETIPRKALAGVKDM Trigger: CATGTCCTTCACTCCTGCCAGAGCTTTCCTTGGGATGGTTTCCAAGGGAAAGGAGAGAAAGATCAAGAAACCAAGACGAAAGGCTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR-3UTR TCA 90 bp | CATACAGAATGGTTTGAACTCTCTGGTCCCCACAGTCTGGTTAATCAAAGTCAAAGCAAATGGCTTTCCTaGGCTCAGCACCCAAGGCGT | + |
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Preference number: 2 (lower is better) Translates to: HTEWFELSGPHSLVNQSQSKWLS*AQHPRR Trigger: ACGCCTTGGGTGCTGAGCTCAGGAAAGCCATTTGCT...TTGACTTTGATTAACCAGACTGTGGGGACCAGAGAGTTCAAACCATTCTGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACTGAGCCCAGGGCCTTGAGCATGTTACCCAAGCACTCTATTGTTGAGATAAGCAGTCTACCTGGATaGGGCCATTGGAAATGGATA | + |
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Preference number: 2 (lower is better) Translates to: KTEPRALSMLPKHSIVEISSLPG*GHWKWI Trigger: TATCCATTTCCAATGGCCTCATCCAGGTAGACTGCT...TATCTCAACAATAGAGTGCTTGGGTAACATGCTCAAGGCCCTGGGCTCAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR-3UTR TCA 90 bp | GAACCCTCCCAGTTGCAAGGAGAGATGATGAGGTGGGAGATACAAAGCCAACCTTTCAAGTCAGTTGAGTaGATGCTGTGCTTGAAATCA | + |
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Preference number: 2 (lower is better) Translates to: EPSQLQGEMMRWEIQSQPFKSVE*MLCLKS Trigger: TGATTTCAAGCACAGCATTCACTCAACTGACTTGAA...AGGTTGGCTTTGTATCTCCCACCTCATCATCTCTCCTTGCAACTGGGAGGGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAGATACAAAGCCAACCTGATTACTTTCTCCACCAGTGAATCCACCTGCAGCAGAATTCAAGTCAGTTaGGTGAATGCTGTGCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: GRYKANLITFSTSESTCSRIQVS*VNAVLE Trigger: TTCAAGCACAGCATTCACTCAACTGACTTGAATTCT...GCTGCAGGTGGATTCACTGGTGGAGAAAGTAATCAGGTTGGCTTTGTATCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR-3UTR GCA 90 bp | CATACAGAATGGTTTGAACTCTCTGGTCCCCACAGTCTGGTTAATCAAAGTCAACATCAATCCAAACCATaGTCAGCAAATGGCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: HTEWFELSGPHSLVNQSQHQSKP*SANGFP Trigger: AGGAAAGCCATTTGCTGAGCATGGTTTGGATTGATG...TTGACTTTGATTAACCAGACTGTGGGGACCAGAGAGTTCAAACCATTCTGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR CCA 72 bp | GGAGAGAAGCCCTGGGAGGCGGAGACTGGACAAGTCTaGTACTGGTCCTGCGGTGCTGGGAGAAGCTCGGCT | + |
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Preference number: 3 (lower is better) Translates to: GEKPWEAETGQV*YWSCGAGRSSA Trigger: AGCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAGACTTGTCCAGTCTCCGCCTCCCAGGGCTTCTCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR CCA 72 bp | AAGCCCTGGGAGGCGGAGACTGGACAAGTCTGGTACTaGTCCTGCGGTGCTGGGAGAAGCTCGGCTCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: KPWEAETGQVWY*SCGAGRSSALS Trigger: TGACAGAGCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAGACTTGTCCAGTCTCCGCCTCCCAGGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR GCA 72 bp | TGGGAGGCGGAGACTGGACAAGTCTGGTACTGGTCCTaGGGTGCTGGGAGAAGCTCGGCTCTGTCATCCTTG | + |
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Preference number: 3 (lower is better) Translates to: WEAETGQVWYWS*GAGRSSALSSL Trigger: CAAGGATGACAGAGCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAGACTTGTCCAGTCTCCGCCTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGGCTGGTCCCATCACCCTGCAGTCAGCCAGGGCGAGGCTGGCCTTTGTTTCAGGGCCCTGCTTTCCTaGACTTCACACAGAGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: EGWSHHPAVSQGEAGLCFRALLS*TSHRAF Trigger: AAAGGCTCTGTGTGAAGTCAAGGAAAGCAGGGCCCT...GAAACAAAGGCCAGCCTCGCCCTGGCTGACTGCAGGGTGATGGGACCAGCCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR GCA 72 bp | GGCGGAGACTGGACAAGTCTGGTACTGGTCCTGCGGTaGTGGGAGAAGCTCGGCTCTGTCATCCTTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: GGDWTSLVLVLR*WEKLGSVILAF Trigger: AAAGGCAAGGATGACAGAGCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAGACTTGTCCAGTCTCCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR CCA 72 bp | TCACCCAGTGGACTCCTTCCCAGGGCAAAGATGAGGTaGGTGGAGATGGCTGGATGGACGGTCAGTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SPSGLLPRAKMR*VEMAGWTVSPV Trigger: CACTGGACTGACCGTCCATCCAGCCATCTCCACCCACCTCATCTTTGCCCTGGGAAGGAGTCCACTGGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR CCA 72 bp | CTGAGCTCAGCACCCAAGGCGTGCTGCCTGCTTGACTaGCATCGATTTGTGCTCCCAAGCAAGGGCCAACCA | + |
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Preference number: 3 (lower is better) Translates to: LSSAPKACCLLD*HRFVLPSKGQP Trigger: TGGTTGGCCCTTGCTTGGGAGCACAAATCGATGCCAGTCAAGCAGGCAGCACGCCTTGGGTGCTGAGCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR TCA 72 bp | TTTCCTGAGCTCAGCACCCAAGGCGTGCTGCCTGCTTaGCTGGCATCGATTTGTGCTCCCAAGCAAGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: FPELSTQGVLPA*LASICAPKQGP Trigger: TGGCCCTTGCTTGGGAGCACAAATCGATGCCAGTCAAGCAGGCAGCACGCCTTGGGTGCTGAGCTCAGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR GCA 72 bp | GGTGGGTGGAGATGGCTGGATGGACGGTCAGTCCAGTaGCAGGATAGAGCAGTCTACCTGGATGAGGCCATT | + |
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Preference number: 3 (lower is better) Translates to: GGWRWLDGRSVQ*QDRAVYLDEAI Trigger: AATGGCCTCATCCAGGTAGACTGCTCTATCCTGGCACTGGACTGACCGTCCATCCAGCCATCTCCACCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR CCA 72 bp | GGAGACTGGACAAGTCTGGTACTGGTCCTGCGGTGCTaGGAGAAGCTCGGCTCTGTCATCCTTGCCTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: GDWTSLVLVLRC*EKLGSVILAFR Trigger: CCTAAAGGCAAGGATGACAGAGCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAGACTTGTCCAGTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR CCA 72 bp | GGTCAGAGTCGCTTGTTGTCCAAAGGGAGGCGTTCATaGTCACAGTCACCCAGTGGACTCCTTCCCAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: GQSRLLSKGRRS*SQSPSGLLPRA Trigger: TGCCCTGGGAAGGAGTCCACTGGGTGACTGTGACCATGAACGCCTCCCTTTGGACAACAAGCGACTCTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| 3UTR CCA 72 bp | CCCCTTGGGAAACTGGCAAAGCTAAGCTGGAGGCTGTaGGTGGAGGATCTGGATGCACGCAGGGTCATACCT | + |
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Preference number: 3 (lower is better) Translates to: PLGKLAKLSWRL*VEDLDARRVIP Trigger: AGGTATGACCCTGCGTGCATCCAGATCCTCCACCCACAGCCTCCAGCTTAGCTTTGCCAGTTTCCCAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR GCA 72 bp | CAAATGGCTTTCCTGAGCTCAGCACCCAAGGCGTGCTaGCTGCTTGACTGGCATCGATTTGTGCTCCCAAGC | + |
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Preference number: 3 (lower is better) Translates to: QMAFLSSAPKAC*LLDWHRFVLPS Trigger: GCTTGGGAGCACAAATCGATGCCAGTCAAGCAGGCAGCACGCCTTGGGTGCTGAGCTCAGGAAAGCCATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR GCA 72 bp | CAGCAAATGGCTTTCCTGAGCTCAGCACCCAAGGCGTaGTGCCTGCTTGACTGGCATCGATTTGTGCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: QQMAFLSSAPKA*CLLDWHRFVLP Trigger: TGGGAGCACAAATCGATGCCAGTCAAGCAGGCAGCACGCCTTGGGTGCTGAGCTCAGGAAAGCCATTTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
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| 3UTR CCA 72 bp | CCCAAGGAAAGCTCTGGCAGGAGTGAAGGACATGGGTaGGGCAGAGCCTTTCAAGGTCAGAGTCGCTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PKESSGRSEGHG*GRAFQGQSRLL Trigger: CAACAAGCGACTCTGACCTTGAAAGGCTCTGCCCCACCCATGTCCTTCACTCCTGCCAGAGCTTTCCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| 3UTR CCA 72 bp | GGAGGGACTGTCAGCGACACAGGATTAGTAAAGAGATaGGGTGCCAGGGTAGCTACATGGGCCTCTGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GGTVSDTGLVKR*GARVATWASEV Trigger: GACCTCAGAGGCCCATGTAGCTACCCTGGCACCCCATCTCTTTACTAATCCTGTGTCGCTGACAGTCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR TCA 72 bp | CCTTGGAAACCATCCCAAGGAAAGCTCTGGCAGGAGTaGAGGACATGGGTGGGGCAGAGCCTTTCAAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PWKPSQGKLWQE*RTWVGQSLSRS Trigger: TGACCTTGAAAGGCTCTGCCCCACCCATGTCCTTCACTCCTGCCAGAGCTTTCCTTGGGATGGTTTCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| 3UTR GCA 72 bp | GCACAGTGCTCACACCATTTCGCCAAGGTCAGGATTTaGCTGTCAAGTGGCCAAACCAGGCAGCAGGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: AQCSHHFAKVRI*LSSGQTRQQVF Trigger: GAACACCTGCTGCCTGGTTTGGCCACTTGACAGGCAAATCCTGACCTTGGCGAAATGGTGTGAGCACTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR TCA 72 bp | TTCCCAACACCATCCCATTCTGATCGCACTCACTGTTaGCAGCAGGCCCCTTGGGAAACTGGCAAAGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: FPTPSHSDRTHC*QQAPWETGKAK Trigger: CTTAGCTTTGCCAGTTTCCCAAGGGGCCTGCTGTCAACAGTGAGTGCGATCAGAATGGGATGGTGTTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR CCA 72 bp | GGATTAGTAAAGAGATGGGGTGCCAGGGTAGCTACATaGGCCTCTGAGGTCGCCAGATCACTGACAATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GLVKRWGARVAT*ASEVARSLTIN Trigger: GTTGATTGTCAGTGATCTGGCGACCTCAGAGGCCCATGTAGCTACCCTGGCACCCCATCTCTTTACTAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACCCAGTGGACTCCTTCCCAGGGCAAAGATGAGGTGGGTGGAGATGGCTGGATGTGAGTCTTGTTCATaGTGTAGAGAAACCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SPSGLLPRAKMRWVEMAGCESCS*CRETQV Trigger: TACCTGGGTTTCTCTACACAATGAACAAGACTCACA...TCCAGCCATCTCCACCCACCTCATCTTTGCCCTGGGAAGGAGTCCACTGGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTGGCAGGAGTGAAGGACATGGGTGGGGCAGAGCCTTTCAAGGTCAGAGTCTGTGAGTCTTGTTCATaGTGTAGAGAAACCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ALAGVKDMGGAEPFKVRVCESCS*CRETQV Trigger: TACCTGGGTTTCTCTACACAATGAACAAGACTCACA...GACTCTGACCTTGAAAGGCTCTGCCCCACCCATGTCCTTCACTCCTGCCAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| 3UTR TCA 72 bp | GAGATACAAAGCCAACCTGATTACTTTCTCCACCAGTaGATCCACCTGCAGCAGGAACTGAGGGGTAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EIQSQPDYFLHQ*IHLQQELRGRL Trigger: CAGCCTACCCCTCAGTTCCTGCTGCAGGTGGATTCACTGGTGGAGAAAGTAATCAGGTTGGCTTTGTATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR CCA 72 bp | TGGGGGAAGGCAGGTAAAGAGCTCTGTTCCCTCTCCTaGCACAGGCCACAACCACAAGCCAAAAATTTGATT | + |
|
Preference number: 3 (lower is better) Translates to: WGKAGKELCSLS*HRPQPQAKNLI Trigger: AATCAAATTTTTGGCTTGTGGTTGTGGCCTGTGCCAGGAGAGGGAACAGAGCTCTTTACCTGCCTTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGTAGCTTTTTCACAGCTGACATCAATCCAAACCATGCTCAGCAAATGGCTCCCCTGACAATGGGCTaGAGGATTAGACCCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: MGSFFTADINPNHAQQMAPLTMG*RIRPLP Trigger: AGGAAGGGGTCTAATCCTCAAGCCCATTGTCAGGGG...AGCCATTTGCTGAGCATGGTTTGGATTGATGTCAGCTGTGAAAAAGCTACCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR TCA 72 bp | AGGAGAGATGATGAGGTGGGAGATACAAAGCCAACCTaGTTACTTTCTCCACCAGTGAATCCACCTGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RRDDEVGDTKPT*LLSPPVNPPAA Trigger: TGCTGCAGGTGGATTCACTGGTGGAGAAAGTAATCAGGTTGGCTTTGTATCTCCCACCTCATCATCTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR GCA 72 bp | GTCAGGTACCCAATTACACCTTGGTGTTGTCCAAGATaGATAAGACAATGGCTGAGTAAGACAGCACTATAC | + |
|
Preference number: 3 (lower is better) Translates to: VRYPITPWCCPR*IRQWLSKTALY Trigger: GTATAGTGCTGTCTTACTCAGCCATTGTCTTATGCATCTTGGACAACACCAAGGTGTAATTGGGTACCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR CCA 72 bp | ATACAGAATGGTTTGAACTCTCTGGTCCCCACAGTCTaGTTAATCAAAGTCAATGTCCACATTACTGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: IQNGLNSLVPTV*LIKVNVHITAP Trigger: GGGAGCAGTAATGTGGACATTGACTTTGATTAACCAGACTGTGGGGACCAGAGAGTTCAAACCATTCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGCTTCATCAGATCTTATTTTATACCAGTGTTCAATAAGTTAATCCTCCCTAGGGCCCTGCTTTCCTaGACTTCACACAGAGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PGFIRSYFIPVFNKLILPRALLS*TSHRAF Trigger: AAAGGCTCTGTGTGAAGTCAAGGAAAGCAGGGCCCT...AGGGAGGATTAACTTATTGAACACTGGTATAAAATAAGATCTGATGAAGCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR CCA 72 bp | ATTACACCTTGGTGTTGTCCAAGATGCATAAGACAATaGCTGAGTAAGACAGCACTATACCTACTCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ITPWCCPRCIRQ*LSKTALYLLQV Trigger: TACCTGGAGTAGGTATAGTGCTGTCTTACTCAGCCATTGTCTTATGCATCTTGGACAACACCAAGGTGTAAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR-3UTR CAA 90 bp | CATACAGAATGGTTTGAACTCTCTGGTCCCCACAGTCTGGTTAATCAAAGTCAATTTCGTCTTGGTTTCTaGATCTTTCTCTCCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: HTEWFELSGPHSLVNQSQFRLGF*IFLSFP Trigger: GGGAAAGGAGAGAAAGATCAAGAAACCAAGACGAAA...TTGACTTTGATTAACCAGACTGTGGGGACCAGAGAGTTCAAACCATTCTGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR TCA 72 bp | ACAGCACTATACCTACTCCAGGTATCTAGTACTCAATaGTGGGTAGCTTTTTCACAGCTGACATCAATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TALYLLQVSSTQ*WVAFSQLTSIQ Trigger: TTGGATTGATGTCAGCTGTGAAAAAGCTACCCATCATTGAGTACTAGATACCTGGAGTAGGTATAGTGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| CDS-3UTR GCA 90 bp | GGCGGAGACTGGACAAGTCTGGTACTGGTCCTGCGGTGCTGGGAGAAGCTCGGCCCGCGATGGGCTTGTTaGACATGGGGCAGACACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGDWTSLVLVLRCWEKLGPRWAC*TWGRHN Trigger: GTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGG...GCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAGACTTGTCCAGTCTCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCAAAGGGAGGCGTTCATGGTCACAGTCACCCAGTGGACTCCTTCCCAGGGCCGTATCGCTCGCTCTaGGCCTGGTTCCGGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CPKGGVHGHSHPVDSFPGPYRSL*AWFRSL Trigger: CAAACTCCGGAACCAGGCTCAGAGCGAGCGATACGG...CCCTGGGAAGGAGTCCACTGGGTGACTGTGACCATGAACGCCTCCCTTTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTACTGGTCCTGCGGTGCTGGGAGAAGCTCGGCTCTGTCATCCTTGCCTTTCCGTATCGCTCGCTCTaGGCCTGGTTCCGGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLVLRCWEKLGSVILAFPYRSL*AWFRSL Trigger: CAAACTCCGGAACCAGGCTCAGAGCGAGCGATACGG...AAAGGCAAGGATGACAGAGCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGTCCCATCACCCTGCAGTCAGCCAGGGCGAGGCTGGCCTTTGTTTCCGTGGGCTTGTTGCACATaGGGCAGACACAACGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: GLVPSPCSQPGRGWPLFPWACCT*GRHNVL Trigger: AAGTACGTTGTGTCTGCCCCATGTGCAACAAGCCCA...CGGAAACAAAGGCCAGCCTCGCCCTGGCTGACTGCAGGGTGATGGGACCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR CCA 90 bp | GGCGGAGACTGGACAAGTCTGGTACTGGTCCTGCGGTGCTGGGAGAAGCTCGGCTGGGCTTGTTGCACATaGGGCAGACACAACGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: GGDWTSLVLVLRCWEKLGWACCT*GRHNVL Trigger: AAGTACGTTGTGTCTGCCCCATGTGCAACAAGCCCA...GCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAGACTTGTCCAGTCTCCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR TCA 90 bp | GACTGGACAAGTCTGGTACTGGTCCTGCGGTGCTGGGAGAAGCTCGGCTCTGTCACTGATCGGTGGCATTaGGCAGGACTTGTTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: DWTSLVLVLRCWEKLGSVTDRWH*AGLVGT Trigger: AGTACCAACAAGTCCTGCTCAATGCCACCGATCAGT...GACAGAGCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAGACTTGTCCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR TCA 90 bp | AAACCCAGGTACCCAAAGTCGGCAGTCTTTCCCAGGGTCCATGTGCCAGGAGCGACTGATCGGTGGCATTaGGCAGGACTTGTTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KPRYPKSAVFPRVHVPGATDRWH*AGLVGT Trigger: AGTACCAACAAGTCCTGCTCAATGCCACCGATCAGT...CGCTCCTGGCACATGGACCCTGGGAAAGACTGCCGACTTTGGGTACCTGGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR GCA 90 bp | GGACATGGGTGGGGCAGAGCCTTTCAAGGTCAGAGTCGCTTGTTGTCCAAAGGGACTTCACCAGACACTTaGGGTGAAAGGCATGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHGWGRAFQGQSRLLSKGTSPDT*GERHAG Trigger: GCCAGCATGCCTTTCACCGCAAGTGTCTGGTGAAGT...CCCTTTGGACAACAAGCGACTCTGACCTTGAAAGGCTCTGCCCCACCCATGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| 3UTR CAA 72 bp | CATGGGTGGGGCAGAGCCTTTCAAGGTCAGAGTCGCTaGTTGTCCAAAGGGAGGCGTTCATGGTCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HGWGRAFQGQSR*LSKGRRSWSQS Trigger: TGACTGTGACCATGAACGCCTCCCTTTGGACAACAAGCGACTCTGACCTTGAAAGGCTCTGCCCCACCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR GCA 90 bp | AAGGAAAGCTCTGGCAGGAGTGAAGGACATGGGTGGGGCAGAGCCTTTCAAGGTACTTCACCAGACACTTaGGGTGAAAGGCATGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KESSGRSEGHGWGRAFQGTSPDT*GERHAG Trigger: GCCAGCATGCCTTTCACCGCAAGTGTCTGGTGAAGT...ACCTTGAAAGGCTCTGCCCCACCCATGTCCTTCACTCCTGCCAGAGCTTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCTGGTACTGGTCCTGCGGTGCTGGGAGAAGCTCGGCTCTGTCATCCTTGCTTGAGGGGAAGGTCTTaGAAACTGATCGGTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KSGTGPAVLGEARLCHPCLRGRS*KLIGGI Trigger: AATGCCACCGATCAGTTTCCAAGACCTTCCCCTCAA...GCAAGGATGACAGAGCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| 3UTR CAA 72 bp | CCATCACCCTGCAGTCAGCCAGGGCGAGGCTGGCCTTaGTTTCCGGCATCCCATGTAAACATTGATTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPCSQPGRGWP*FPASHVNIDFS Trigger: GGAAAAATCAATGTTTACATGGGATGCCGGAAACAAAGGCCAGCCTCGCCCTGGCTGACTGCAGGGTGATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| 3UTR CAA 72 bp | AGCACAGTGCTCACACCATTTCGCCAAGGTCAGGATTaGCCTGTCAAGTGGCCAAACCAGGCAGCAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: STVLTPFRQGQD*PVKWPNQAAGV Trigger: AACACCTGCTGCCTGGTTTGGCCACTTGACAGGCAAATCCTGACCTTGGCGAAATGGTGTGAGCACTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR CAA 72 bp | TCCTGCGGTGCTGGGAGAAGCTCGGCTCTGTCATCCTaGCCTTTAGGTGTGTGTGAGTCTTGTTCATTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCGAGRSSALSS*PLGVCESCSLC Trigger: ACACAATGAACAAGACTCACACACACCTAAAGGCAAGGATGACAGAGCCGAGCTTCTCCCAGCACCGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGTAGCTTTTTCACAGCTGACATCAATCCAAACCATGCTCAGCAAATGGCTCCGCGATGGGCTTGTTaGACATGGGGCAGACACAAC | + |
|
Preference number: 4 (lower is better) Translates to: MGSFFTADINPNHAQQMAPRWAC*TWGRHN Trigger: GTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGG...AGCCATTTGCTGAGCATGGTTTGGATTGATGTCAGCTGTGAAAAAGCTACCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGATACAAAGCCAACCTGATTACTTTCTCCACCAGTGAATCCACCTGCAGCTTGAGGGGAAGGTCTTaGAAACTGATCGGTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GRYKANLITFSTSESTCSLRGRS*KLIGGI Trigger: AATGCCACCGATCAGTTTCCAAGACCTTCCCCTCAA...GCTGCAGGTGGATTCACTGGTGGAGAAAGTAATCAGGTTGGCTTTGTATCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR CAA 72 bp | TTTCATCAGGATGCTAACACTGATGAACCCTCCCAGTaGCAAGGAGAGATGATGAGGTGGGAGATACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHQDANTDEPSQ*QGEMMRWEIQS Trigger: GCTTTGTATCTCCCACCTCATCATCTCTCCTTGCAACTGGGAGGGTTCATCAGTGTTAGCATCCTGATGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| 3UTR CAA 72 bp | AAAAGACAGCTGAGTAAAGATCTCGATTATGTGAGCTaGCCACCCAAGCACAGTGCTCACACCATTTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRQLSKDLDYVS*PPKHSAHTISP Trigger: TGGCGAAATGGTGTGAGCACTGTGCTTGGGTGGCAAGCTCACATAATCGAGATCTTTACTCAGCTGTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046941.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGCTGGTCCCATCACCCTGCAGTCAGCCAGGGCGAGGCTGGCCTTTGTTTCGGGCCCGCGATGGGCTaGTTGCACATGGGGCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: EGWSHHPAVSQGEAGLCFGPAMG*LHMGQT Trigger: TGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCC...GAAACAAAGGCCAGCCTCGCCCTGGCTGACTGCAGGGTGATGGGACCAGCCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR CAA 90 bp | GACTGGACAAGTCTGGTACTGGTCCTGCGGTGCTGGGAGAAGCTCGGCTCTGTCGGGCCCGCGATGGGCTaGTTGCACATGGGGCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: DWTSLVLVLRCWEKLGSVGPAMG*LHMGQT Trigger: TGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCC...GACAGAGCCGAGCTTCTCCCAGCACCGCAGGACCAGTACCAGACTTGTCCAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS CCA 90 bp | CCAGCAGGATCCCGATGCTCTGCGAGGTCTCCGTGGGGCCCGCGATaGGCTTGTTGCACATGGGGCAGACACAACGTACTTCTAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: PAGSRCSARSPWGPR*ACCTWGRHNVLLAT Trigger: AGTGGCTAGAAGTACGTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCCCACGGAGACCTCGCAGAGCATCGGGATCCTGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR CAA 90 bp | TGGTCCCATCACCCTGCAGTCAGCCAGGGCGAGGCTGGCCTTTGTTTCCGGCATCCCGCGATGGGCTTGTaGCACATGGGGCAGACACAA | + |
|
Preference number: 5 (lower is better) Translates to: WSHHPAVSQGEAGLCFRHPAMGL*HMGQTQ Trigger: TTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGG...ATGCCGGAAACAAAGGCCAGCCTCGCCCTGGCTGACTGCAGGGTGATGGGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS GCA 90 bp | TCCCGATGCTCTGCGAGGTCTCCGTGGGGCCCGCGATGGGCTTGTTaGACATGGGGCAGACACAACGTACTTCTAGCCACTTCACCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRCSARSPWGPRWAC*TWGRHNVLLATSPD Trigger: GTCTGGTGAAGTGGCTAGAAGTACGTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCCCACGGAGACCTCGCAGAGCATCGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS CCA 90 bp | ACACCAGTTCATCCAGCAGGATCCCGATGCTCTGCGAGGTCTCCGTaGGGCCCGCGATGGGCTTGTTGCACATGGGGCAGACACAACGTA | + |
|
Preference number: 5 (lower is better) Translates to: TPVHPAGSRCSARSP*GPRWACCTWGRHNV Trigger: TACGTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCCCACGGAGACCTCGCAGAGCATCGGGATCCTGCTGGATGAACTGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR CAA 90 bp | GTCCAAAGGGAGGCGTTCATGGTCACAGTCACCCAGTGGACTCCTTCCCAGGGCCCCGCGATGGGCTTGTaGCACATGGGGCAGACACAA | + |
|
Preference number: 5 (lower is better) Translates to: VQREAFMVTVTQWTPSQGPAMGL*HMGQTQ Trigger: TTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGG...GCCCTGGGAAGGAGTCCACTGGGTGACTGTGACCATGAACGCCTCCCTTTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS CCA 90 bp | TGCTCTGCGAGGTCTCCGTGGGGCCCGCGATGGGCTTGTTGCACATaGGGCAGACACAACGTACTTCTAGCCACTTCACCAGACACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSARSPWGPRWACCT*GRHNVLLATSPDTC Trigger: GCAAGTGTCTGGTGAAGTGGCTAGAAGTACGTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCCCACGGAGACCTCGCAGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGGCAGGAGTGAAGGACATGGGTGGGGCAGAGCCTTTCAAGGTCAGAGTCGGCATTGAGCAGGACTaGTTGGTACTAACCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALAGVKDMGGAEPFKVRVGIEQD*LVLTSP Trigger: GGGACTGGTTAGTACCAACAAGTCCTGCTCAATGCC...GACTCTGACCTTGAAAGGCTCTGCCCCACCCATGTCCTTCACTCCTGCCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCAAAGGGAGGCGTTCATGGTCACAGTCACCCAGTGGACTCCTTCCCAGGGATTGAGCAGGACTTGTaGGTACTAACCAGTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CPKGGVHGHSHPVDSFPGIEQDL*VLTSPR Trigger: CCTGGGACTGGTTAGTACCAACAAGTCCTGCTCAAT...CCCTGGGAAGGAGTCCACTGGGTGACTGTGACCATGAACGCCTCCCTTTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS-3UTR CAA 90 bp | GGACATGGGTGGGGCAGAGCCTTTCAAGGTCAGAGTCGCTTGTTGTCCAAAGGGGGCATTGAGCAGGACTaGTTGGTACTAACCAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GHGWGRAFQGQSRLLSKGGIEQD*LVLTSP Trigger: GGGACTGGTTAGTACCAACAAGTCCTGCTCAATGCC...CCCTTTGGACAACAAGCGACTCTGACCTTGAAAGGCTCTGCCCCACCCATGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS GCA 90 bp | ACATGGGGCAGACACAACGTACTTCTAGCCACTTCACCAGACACTTaGGGTGAAAGGCATGCTGGCATGGAAGCACGCCTAGTTCATCCT | + |
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Preference number: 5 (lower is better) Translates to: TWGRHNVLLATSPDT*GERHAGMEARLVHP Trigger: AGGATGAACTAGGCGTGCTTCCATGCCAGCATGCCTTTCACCGCAAGTGTCTGGTGAAGTGGCTAGAAGTACGTTGTGTCTGCCCCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS-3UTR CAA 90 bp | TTGATCTTTCTCTCCTTTCCCTTGGAAACCATCCCAAGGAAAGCTCTGGCAGGAATTGAGCAGGACTTGTaGGTACTAACCAGTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LIFLSFPLETIPRKALAGIEQDL*VLTSPR Trigger: CCTGGGACTGGTTAGTACCAACAAGTCCTGCTCAAT...TCCTGCCAGAGCTTTCCTTGGGATGGTTTCCAAGGGAAAGGAGAGAAAGATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS-3UTR CAA 90 bp | TTGATCTTTCTCTCCTTTCCCTTGGAAACCATCCCAAGGAAAGCTCTGGCAGGAAGTTCATCCTTCCCCTaGAAGTCTTCCAGGCAAACT | + |
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Preference number: 5 (lower is better) Translates to: LIFLSFPLETIPRKALAGSSSFP*KSSRQT Trigger: AGTTTGCCTGGAAGACTTCAAGGGGAAGGATGAACT...TCCTGCCAGAGCTTTCCTTGGGATGGTTTCCAAGGGAAAGGAGAGAAAGATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS CCA 72 bp | CATCCAGCAGGATCCCGATGCTCTGCGAGGTCTCCGTaGGGCCCGCGATGGGCTTGTTGCACATGGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: HPAGSRCSARSP*GPRWACCTWGR Trigger: TCTGCCCCATGTGCAACAAGCCCATCGCGGGCCCCACGGAGACCTCGCAGAGCATCGGGATCCTGCTGGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS CCA 72 bp | TCCCGATGCTCTGCGAGGTCTCCGTGGGGCCCGCGATaGGCTTGTTGCACATGGGGCAGACACAACGTACTT | + |
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Preference number: 6 (lower is better) Translates to: SRCSARSPWGPR*ACCTWGRHNVL Trigger: AAGTACGTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCCCACGGAGACCTCGCAGAGCATCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS CAA 72 bp | CTCTGCGAGGTCTCCGTGGGGCCCGCGATGGGCTTGTaGCACATGGGGCAGACACAACGTACTTCTAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LCEVSVGPAMGL*HMGQTQRTSSH Trigger: GTGGCTAGAAGTACGTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCCCACGGAGACCTCGCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS CAA 90 bp | AGGATCCCGATGCTCTGCGAGGTCTCCGTGGGGCCCGCGATGGGCTaGTTGCACATGGGGCAGACACAACGTACTTCTAGCCACTTCACC | + |
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Preference number: 6 (lower is better) Translates to: RIPMLCEVSVGPAMG*LHMGQTQRTSSHFT Trigger: GGTGAAGTGGCTAGAAGTACGTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCCCACGGAGACCTCGCAGAGCATCGGGATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS GCA 72 bp | TCTGCGAGGTCTCCGTGGGGCCCGCGATGGGCTTGTTaGACATGGGGCAGACACAACGTACTTCTAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: SARSPWGPRWAC*TWGRHNVLLAT Trigger: AGTGGCTAGAAGTACGTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCCCACGGAGACCTCGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS CAA 72 bp | ATGCTCTGCGAGGTCTCCGTGGGGCCCGCGATGGGCTaGTTGCACATGGGGCAGACACAACGTACTTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: MLCEVSVGPAMG*LHMGQTQRTSS Trigger: GCTAGAAGTACGTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCCCACGGAGACCTCGCAGAGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS CAA 90 bp | ATCCCGATGCTCTGCGAGGTCTCCGTGGGGCCCGCGATGGGCTTGTaGCACATGGGGCAGACACAACGTACTTCTAGCCACTTCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: IPMLCEVSVGPAMGL*HMGQTQRTSSHFTR Trigger: TCTGGTGAAGTGGCTAGAAGTACGTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCCCACGGAGACCTCGCAGAGCATCGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS CCA 72 bp | AGGTCTCCGTGGGGCCCGCGATGGGCTTGTTGCACATaGGGCAGACACAACGTACTTCTAGCCACTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: RSPWGPRWACCT*GRHNVLLATSP Trigger: TGGTGAAGTGGCTAGAAGTACGTTGTGTCTGCCCCATGTGCAACAAGCCCATCGCGGGCCCCACGGAGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS CAA 90 bp | AGGGGAAGGTCTTGGAAACTGATCGGTGGCATTGAGCAGGACTTGTaGGTACTAACCAGTCCCAGGCCACAGAAACACCCGTTACACCAC | + |
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Preference number: 6 (lower is better) Translates to: RGRSWKLIGGIEQDL*VLTSPRPQKHPLHH Trigger: GTGGTGTAACGGGTGTTTCTGTGGCCTGGGACTGGTTAGTACCAACAAGTCCTGCTCAATGCCACCGATCAGTTTCCAAGACCTTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS TCA 72 bp | CAACGTACTTCTAGCCACTTCACCAGACACTTGCGGTaGAAGGCATGCTGGCATGGAAGCACGCCTAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: QRTSSHFTRHLR*KACWHGSTPSS Trigger: TGAACTAGGCGTGCTTCCATGCCAGCATGCCTTTCACCGCAAGTGTCTGGTGAAGTGGCTAGAAGTACGTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS CAA 72 bp | TCTTGGAAACTGATCGGTGGCATTGAGCAGGACTTGTaGGTACTAACCAGTCCCAGGCCACAGAAACACCCG | + |
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Preference number: 6 (lower is better) Translates to: SWKLIGGIEQDL*VLTSPRPQKHP Trigger: CGGGTGTTTCTGTGGCCTGGGACTGGTTAGTACCAACAAGTCCTGCTCAATGCCACCGATCAGTTTCCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS CAA 90 bp | TTGAGGGGAAGGTCTTGGAAACTGATCGGTGGCATTGAGCAGGACTaGTTGGTACTAACCAGTCCCAGGCCACAGAAACACCCGTTACAC | + |
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Preference number: 6 (lower is better) Translates to: LRGRSWKLIGGIEQD*LVLTSPRPQKHPLH Trigger: GTGTAACGGGTGTTTCTGTGGCCTGGGACTGGTTAGTACCAACAAGTCCTGCTCAATGCCACCGATCAGTTTCCAAGACCTTCCCCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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| CDS CAA 72 bp | AGGTCTTGGAAACTGATCGGTGGCATTGAGCAGGACTaGTTGGTACTAACCAGTCCCAGGCCACAGAAACAC | + |
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Preference number: 6 (lower is better) Translates to: RSWKLIGGIEQD*LVLTSPRPQKH Trigger: GTGTTTCTGTGGCCTGGGACTGGTTAGTACCAACAAGTCCTGCTCAATGCCACCGATCAGTTTCCAAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046941.8 ENSMUST00000217278.2 |
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