Pregenerated sensors for RNF121 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070426Ensembl transcript IDs: ENSMUST00000089052.11, ENSMUST00000096639.12, ENSMUST00000106953.8, ENSMUST00000130074.2, ENSMUST00000131104.3
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAACCCAGACACAGCTGGGGTGGTCCTGAATGGCCCAAGTGCCTTTaGGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: QPRHSWGGPEWPKCL*VFSTQVFVGSTESA Trigger: GGCACTCTCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCATTCAGGACCACCCCAGCTGTGTCTGGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| 3UTR TCA 90 bp | AAGCACCCAGCCTCCTGCAAACCCACCAGTGCTCTCAGCCAGAGGTaGGAAGACGCCTCTCAACCAATAATACCGCAGCTTTGCCCAACC | + |
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Preference number: 1 (lower is better) Translates to: KHPASCKPTSALSQR*EDASQPIIPQLCPT Trigger: GGTTGGGCAAAGCTGCGGTATTATTGGTTGAGAGGCGTCTTCTCACCTCTGGCTGAGAGCACTGGTGGGTTTGCAGGAGGCTGGGTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR GCA 90 bp | CCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGAGTaGCCTGAGGTCCATAGTGGGTGGTGGGTTCTCCAGGGATGTGAT | + |
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Preference number: 1 (lower is better) Translates to: PLSLFHPSLCGQHGE*PEVHSGWWVLQGCD Trigger: ATCACATCCCTGGAGAACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| 3UTR CCA 90 bp | AGCTTCCACAGCTTAATGATATATAGATTGCTTTTATACTCTGCCTaGCAATGGCCCTGCTCAGGGGCAGGTTATCCATGCTGCTCATAT | + |
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Preference number: 1 (lower is better) Translates to: SFHSLMIYRLLLYSA*QWPCSGAGYPCCSY Trigger: ATATGAGCAGCATGGATAACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAATCTATATATCATTAAGCTGTGGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR GCA 90 bp | TTCCATGAAGGGTGTACTTGCACAAGAAGCTGCAACATTCGCTGCTaGCAATGTAGCTTCCACAGCTTAATGATATATAGATTGCTTTTA | + |
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Preference number: 1 (lower is better) Translates to: FHEGCTCTRSCNIRC*QCSFHSLMIYRLLL Trigger: TAAAAGCAATCTATATATCATTAAGCTGTGGAAGCTACATTGGCAGCAGCGAATGTTGCAGCTTCTTGTGCAAGTACACCCTTCATGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGCCAAATTTCTCTAGACACCCAGTGCTGCTGACCCATGATGCCCTCCCCTACTCTGCCTGGCAATaGCCCTGCTCAGGGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: ARPNFSRHPVLLTHDALPYSAWQ*PCSGAG Trigger: ACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTA...GGGGAGGGCATCATGGGTCAGCAGCACTGGGTGTCTAGAGAAATTTGGCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR TCA 90 bp | CCCATCATGTCCAGAGATGAAGAGACCCTTTACCGCTCAGTGCTAATCTGGCACAGGGGAAGGGTAGGCTaGAGCACCCAGCCTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PIMSRDEETLYRSVLIWHRGRVG*STQPPA Trigger: TGCAGGAGGCTGGGTGCTTCAGCCTACCCTTCCCCT...GTGCCAGATTAGCACTGAGCGGTAAAGGGTCTCTTCATCTCTGGACATGATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR GCA 90 bp | TGCCCTCCCCCTTTCTTCAGACTTCCAGGACTACAGTTAGGCCTGCTCAGAAGTCTGCAAACCCACCAGTaGTCTCAGCCAGAGGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: CPPPFFRLPGLQLGLLRSLQTHQ*SQPEVR Trigger: TCTCACCTCTGGCTGAGAGCACTGGTGGGTTTGCAG...ACTTCTGAGCAGGCCTAACTGTAGTCCTGGAAGTCTGAAGAAAGGGGGAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR CCA 90 bp | GGCACACTGATGACTGGCAGAAAACAGAGATCCATTAGTCTGTCTGCTCTGTGCCCACCCAAGTCTTTGTaGGCAGCACGGAGAGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GTLMTGRKQRSISLSALCPPKSL*AARRVP Trigger: GGGCACTCTCCGTGCTGCCCACAAAGACTTGGGTGG...GCACAGAGCAGACAGACTAATGGATCTCTGTTTTCTGCCAGTCATCAGTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR TCA 90 bp | TTCAAATGGGCCAGGCCAAATTTCTCTAGACACCCAGTGCTGCTGACCCATGATAGTGCAAACCAGGCTTaGGCCTTGCAGAGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: FKWARPNFSRHPVLLTHDSANQA*ALQREG Trigger: CCCTTCCCTCTGCAAGGCTCAAGCCTGGTTTGCACT...ATCATGGGTCAGCAGCACTGGGTGTCTAGAGAAATTTGGCCTGGCCCATTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR TCA 90 bp | ATTGCTTTTATACTCTGCCTGGCAATGGCCCTGCTCAGGGGCAGGTTATCCATGTGGCCCAAGTGCCTTTaGGTCTTTTCCACCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: IAFILCLAMALLRGRLSMWPKCL*VFSTQV Trigger: GACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCA...CATGGATAACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTCATGGAGCTTTATTCAGATGTGATGACAAGATCCTGTTTGGTTCTTGTAGGGGAAGGGTAGGCTaGAGCACCCAGCCTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PAHGALFRCDDKILFGSCRGRVG*STQPPA Trigger: TGCAGGAGGCTGGGTGCTTCAGCCTACCCTTCCCCT...ACAAGAACCAAACAGGATCTTGTCATCACATCTGAATAAAGCTCCATGAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR TCA 90 bp | AATTTCTCTAGACACCCAGTGCTGCTGACCCATGATGCCCTCCCCCTTTCTTCATCCAAAACATGTCAGTaGATTTGGAGGCCACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: NFSRHPVLLTHDALPLSSSKTCQ*IWRPQG Trigger: GCCCTGTGGCCTCCAAATTCACTGACATGTTTTGGA...TGAAGAAAGGGGGAGGGCATCATGGGTCAGCAGCACTGGGTGTCTAGAGAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR TCA 90 bp | ATTGCTTTTATACTCTGCCTGGCAATGGCCCTGCTCAGGGGCAGGTTATCCATGTCCAAAACATGTCAGTaGATTTGGAGGCCACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: IAFILCLAMALLRGRLSMSKTCQ*IWRPQG Trigger: GCCCTGTGGCCTCCAAATTCACTGACATGTTTTGGA...CATGGATAACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR TCA 90 bp | GCAGAAAACAGAGATCCATTAGTCTGTCTGCTCTGTGCATACACAAACATACACAGTGCAAACCAGGCTTaGGCCTTGCAGAGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: AENRDPLVCLLCAYTNIHSANQA*ALQREG Trigger: CCCTTCCCTCTGCAAGGCTCAAGCCTGGTTTGCACT...GTGTATGTTTGTGTATGCACAGAGCAGACAGACTAATGGATCTCTGTTTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTCATGGAGCTTTATTCAGATGTGATGACAAGATCCTGTTTGGTTCTTGTAAGCACCCAGCCTCCTaGAAACCCACCAGTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: PAHGALFRCDDKILFGSCKHPAS*KPTSAL Trigger: GAGAGCACTGGTGGGTTTGCAGGAGGCTGGGTGCTT...ACAAGAACCAAACAGGATCTTGTCATCACATCTGAATAAAGCTCCATGAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR GCA 90 bp | TTCAAATGGGCCAGGCCAAATTTCTCTAGACACCCAGTGCTGCTGACCCATGATCTCTTCTACACTGAGTaGAAACCAGGCTTGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: FKWARPNFSRHPVLLTHDLFYTE*KPGLSL Trigger: AAGGCTCAAGCCTGGTTTGCACTCAGTGTAGAAGAG...ATCATGGGTCAGCAGCACTGGGTGTCTAGAGAAATTTGGCCTGGCCCATTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR CCA 90 bp | GCGTGTCCAGCTTTGCAGCCAGCTCATGGAGCTTTATTCAGATGTGATGACAAGGGGCACACTGATGACTaGCAGAAAACAGAGATCCAT | + |
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Preference number: 2 (lower is better) Translates to: ACPALQPAHGALFRCDDKGHTDD*QKTEIH Trigger: ATGGATCTCTGTTTTCTGCCAGTCATCAGTGTGCCC...CTTGTCATCACATCTGAATAAAGCTCCATGAGCTGGCTGCAAAGCTGGACACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096639.12 |
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| 3UTR CAA 90 bp | ATTCGCTGCTGCCAATGTAGCTTCCACAGCTTAATGATATATAGATaGCTTTTATACTCTGCCTGGCAATGGCCCTGCTCAGGGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: IRCCQCSFHSLMIYR*LLYSAWQWPCSGAG Trigger: ACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAATCTATATATCATTAAGCTGTGGAAGCTACATTGGCAGCAGCGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR CCA 90 bp | GTCTGCTCTGTGCATACACAAACATACACACTCTTAGGCTTTCAGGAAGGAAGTCTTTTATACTCTGCCTaGCAATGGCCCTGCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: VCSVHTQTYTLLGFQEGSLLYSA*QWPCSG Trigger: CCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAG...ACTTCCTTCCTGAAAGCCTAAGAGTGTGTATGTTTGTGTATGCACAGAGCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR TCA 90 bp | GAGCTTTATTCAGATGTGATGACAAGATCCTGTTTGGTTCTTGTTGCCTTCAAAAGTGCTGCTGACCCATaGTGCCCTCCCCCTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: ELYSDVMTRSCLVLVAFKSAADP*CPPPFF Trigger: GAAGAAAGGGGGAGGGCATCATGGGTCAGCAGCACT...TTTGAAGGCAACAAGAACCAAACAGGATCTTGTCATCACATCTGAATAAAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTAGCTTCAAGGGCACACTGATGACTGGCAGAAAACAGAGATCCATTAGTATTGCTTTTATACTCTaGCTGGCAATGGCCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: PLSFKGTLMTGRKQRSISIAFIL*LAMALL Trigger: GAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAAT...ACTAATGGATCTCTGTTTTCTGCCAGTCATCAGTGTGCCCTTGAAGCTAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR CAA 90 bp | AGCCAGCTCATGGAGCTTTATTCAGATGTGATGACAAGATCCTGTTaGGTTCTTGTTGCCTTCAAATGGGCCAGGCCAAATTTCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SQLMELYSDVMTRSC*VLVAFKWARPNFSR Trigger: TCTAGAGAAATTTGGCCTGGCCCATTTGAAGGCAACAAGAACCAAACAGGATCTTGTCATCACATCTGAATAAAGCTCCATGAGCTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR GCA 90 bp | AGAGATCCATTAGTCTGTCTGCTCTGTGCATACACAAACATACACACTCTTAGGATTGCTTTTATACTCTaGCTGGCAATGGCCCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: RDPLVCLLCAYTNIHTLRIAFIL*LAMALL Trigger: GAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAAT...CCTAAGAGTGTGTATGTTTGTGTATGCACAGAGCAGACAGACTAATGGATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR GCA 90 bp | CAAGATCCTGTTTGGTTCTTGTTGCCTTCAAATGGGCCAGGCCAAATTTCTCTAAGTCTGTCTGCTCTGTaGATACACAAACATACACAC | + |
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Preference number: 2 (lower is better) Translates to: QDPVWFLLPSNGPGQISLSLSAL*IHKHTH Trigger: GTGTGTATGTTTGTGTATGCACAGAGCAGACAGACT...TAGAGAAATTTGGCCTGGCCCATTTGAAGGCAACAAGAACCAAACAGGATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTTATTCAGATGTGATGACAAGATCCTGTTTGGTTCTTGTTGCCTTCAAAGGGCACACTGATGACTaGCAGAAAACAGAGATCCAT | + |
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Preference number: 2 (lower is better) Translates to: ELYSDVMTRSCLVLVAFKGHTDD*QKTEIH Trigger: ATGGATCTCTGTTTTCTGCCAGTCATCAGTGTGCCC...TTTGAAGGCAACAAGAACCAAACAGGATCTTGTCATCACATCTGAATAAAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR TCA 72 bp | CACAGCTGGGGTGGTCCTGAATGGCCCAAGTGCCTTTaGGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACG | + |
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Preference number: 3 (lower is better) Translates to: HSWGGPEWPKCL*VFSTQVFVGST Trigger: CGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCATTCAGGACCACCCCAGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| 3UTR TCA 72 bp | GGGCCAGGCCAAATTTCTCTAGACACCCAGTGCTGCTaGCCCATGATGCCCTCCCCCTTTCTTCAGACTTCC | + |
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Preference number: 3 (lower is better) Translates to: GPGQISLDTQCC*PMMPSPFLQTS Trigger: GGAAGTCTGAAGAAAGGGGGAGGGCATCATGGGTCAGCAGCACTGGGTGTCTAGAGAAATTTGGCCTGGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR TCA 72 bp | GCCTCCTGCAAACCCACCAGTGCTCTCAGCCAGAGGTaGGAAGACGCCTCTCAACCAATAATACCGCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: ASCKPTSALSQR*EDASQPIIPQL Trigger: AAGCTGCGGTATTATTGGTTGAGAGGCGTCTTCTCACCTCTGGCTGAGAGCACTGGTGGGTTTGCAGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGCCAAATTTCTCTAGACACCCAGTGCTGCTGACCCATGATGCCCTCCCCGAAAAGTCATTGATTTaGCCACCCCCAGCCTTTAGT | + |
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Preference number: 3 (lower is better) Translates to: ARPNFSRHPVLLTHDALPEKSLI*PPPAFS Trigger: ACTAAAGGCTGGGGGTGGCAAAATCAATGACTTTTC...GGGGAGGGCATCATGGGTCAGCAGCACTGGGTGTCTAGAGAAATTTGGCCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR TCA 72 bp | CCATTCTTAACGTCAGGCCTGGGAAAAACCCACAAATaGCCAAGCCTACCTAGGGACGTTTCCTGGGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: PFLTSGLGKTHK*PSLPRDVSWAG Trigger: TCCAGCCCAGGAAACGTCCCTAGGTAGGCTTGGTCATTTGTGGGTTTTTCCCAGGCCTGACGTTAAGAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGGAAGGAAGTGATGTGCAGAGTACCCTTTGGCACATGTCAACACTTCCAGAGTGCAAACCAGGCTaGAGCCTTGCAGAGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: FQEGSDVQSTLWHMSTLPECKPG*SLAEGR Trigger: CCTTCCCTCTGCAAGGCTCAAGCCTGGTTTGCACTC...TGGAAGTGTTGACATGTGCCAAAGGGTACTCTGCACATCACTTCCTTCCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR GCA 72 bp | TTTGGCACATGTCAACACTTCCATGAAGGGTGTACTTaGACAAGAAGCTGCAACATTCGCTGCTGCCAATGT | + |
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Preference number: 3 (lower is better) Translates to: FGTCQHFHEGCT*TRSCNIRCCQC Trigger: ACATTGGCAGCAGCGAATGTTGCAGCTTCTTGTGCAAGTACACCCTTCATGGAAGTGTTGACATGTGCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR CCA 72 bp | ATGATATATAGATTGCTTTTATACTCTGCCTGGCAATaGCCCTGCTCAGGGGCAGGTTATCCATGCTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: MIYRLLLYSAWQ*PCSGAGYPCCS Trigger: TGAGCAGCATGGATAACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAATCTATATATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR CCA 72 bp | ATGACAAGATCCTGTTTGGTTCTTGTTGCCTTCAAATaGGCCAGGCCAAATTTCTCTAGACACCCAGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: MTRSCLVLVAFK*ARPNFSRHPVL Trigger: CAGCACTGGGTGTCTAGAGAAATTTGGCCTGGCCCATTTGAAGGCAACAAGAACCAAACAGGATCTTGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCAGACAAAAAGGCAACAGAGTCATACACAACACCCATCATGTCCAGAGAAATAATACCGCAGCTTaGCCCAACCCTGTTCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: VSRQKGNRVIHNTHHVQRNNTAA*PNPVQA Trigger: TGCTTGAACAGGGTTGGGCAAAGCTGCGGTATTATT...TCTCTGGACATGATGGGTGTTGTGTATGACTCTGTTGCCTTTTTGTCTGGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| 3UTR CCA 72 bp | AGCTTAATGATATATAGATTGCTTTTATACTCTGCCTaGCAATGGCCCTGCTCAGGGGCAGGTTATCCATGC | + |
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Preference number: 3 (lower is better) Translates to: SLMIYRLLLYSA*QWPCSGAGYPC Trigger: GCATGGATAACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAATCTATATATCATTAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR GCA 90 bp | GTGGGCAGCACGGAGAGTGCCCTGAGGTCCATAGTGGGTGGTGGGTTCTCCAGGACGCTGTCTGAGAGGTaGTTGGTAGGCATGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: VGSTESALRSIVGGGFSRTLSER*LVGMPD Trigger: GTCGGGCATGCCTACCAAGCACCTCTCAGACAGCGT...CCTGGAGAACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS-3UTR GCA 90 bp | GTCTTTGTGGGCAGCACGGAGAGTGCCCTGAGGTCCATAGTGGGTGGTGGGTTCACGCTGTCTGAGAGGTaGTTGGTAGGCATGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: VFVGSTESALRSIVGGGFTLSER*LVGMPD Trigger: GTCGGGCATGCCTACCAAGCACCTCTCAGACAGCGT...GAACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCACAAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS-3UTR TCA 90 bp | GTCTTTGTGGGCAGCACGGAGAGTGCCCTGAGGTCCATAGTGGGTGGTGGGTTCGCAGCTGTCCATACATaGCATGAGGCCTTTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VFVGSTESALRSIVGGGFAAVHT*HEAFPR Trigger: CCTGGGAAAGGCCTCATGTCATGTATGGACAGCTGC...GAACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCACAAAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS-3UTR GCA 90 bp | GTGGGCAGCACGGAGAGTGCCCTGAGGTCCATAGTGGGTGGTGGGTTCTCCAGGGCTTCTTTCCCACGATaGACCAGCCTCGAATACAGA | + |
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Preference number: 4 (lower is better) Translates to: VGSTESALRSIVGGGFSRASFPR*TSLEYR Trigger: TCTGTATTCGAGGCTGGTGCATCGTGGGAAAGAAGC...CCTGGAGAACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS-3UTR TCA 90 bp | GTGGGCAGCACGGAGAGTGCCCTGAGGTCCATAGTGGGTGGTGGGTTCTCCAGGGGAACAACCCACATCTaGAAGAGGGTCACCATATTG | + |
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Preference number: 4 (lower is better) Translates to: VGSTESALRSIVGGGFSRGTTHI*KRVTIL Trigger: CAATATGGTGACCCTCTTTCAGATGTGGGTTGTTCC...CCTGGAGAACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS-3UTR TCA 90 bp | TTCCCCACCAACCCAGACACAGCTGGGGTGGTCCTGAATGGCCCAAGTGCCTTTAGCACACACGCTGTCTaGGAGGTGCTTGGTAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FPTNPDTAGVVLNGPSAFSTHAV*EVLGRH Trigger: ATGCCTACCAAGCACCTCTCAGACAGCGTGTGTGCT...AAAGGCACTTGGGCCATTCAGGACCACCCCAGCTGTGTCTGGGTTGGTGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS-3UTR GCA 90 bp | GTCTTTGTGGGCAGCACGGAGAGTGCCCTGAGGTCCATAGTGGGTGGTGGGTTCCCACGATGTTTGGCATaGATTCGAGCATGTTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: VFVGSTESALRSIVGGGFPRCLA*IRACST Trigger: GGTCGAACATGCTCGAATGCATGCCAAACATCGTGG...GAACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCACAAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCCACCAACCCAGACACAGCTGGGGTGGTCCTGAATGGCCCAAGTGCCTTTCCACAAAGATCTGCTaGCCACACACAGCACACACG | + |
|
Preference number: 4 (lower is better) Translates to: FPHQPRHSWGGPEWPKCLSTKIC*PHTAHT Trigger: CGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGA...AAGGCACTTGGGCCATTCAGGACCACCCCAGCTGTGTCTGGGTTGGTGGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGCAGCACGGAGAGTGCCCTGAGGTCCATAGTGGGTGGTGGGTTCTCCAGGCATGGAATACGTGATTaGAGGAAAGCCTGTACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGSTESALRSIVGGGFSRHGIRD*RKACTC Trigger: ACACGTACAGGCTTTCCTGCAATCACGTATTCCATG...CCTGGAGAACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTGGGCAGCACGGAGAGTGCCCTGAGGTCCATAGTGGGTGGTGGGTTCTCCGCTTCTTTCCCACGATaGACCAGCCTCGAATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FVGSTESALRSIVGGGFSASFPR*TSLEYR Trigger: TCTGTATTCGAGGCTGGTGCATCGTGGGAAAGAAGC...GGAGAACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCCCACCAACCCAGACACAGCTGGGGTGGTCCTGAATGGCCCAAGTGCCTTCCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA | + |
|
Preference number: 4 (lower is better) Translates to: FPHQPRHSWGGPEWPKCLPMMTG*QATKYR Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...AAGGCACTTGGGCCATTCAGGACCACCCCAGCTGTGTCTGGGTTGGTGGGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGAGTGAGGACCATTTCAGCGTaGATGGCTTCGTGGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: PSAFESFPPKSLWAARRVRTISA*MASWPR Trigger: TCGTGGCCACGAAGCCATGCACGCTGAAATGGTCCT...CACTCTCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTCCTGAATGGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGAGCACACACGCTGTCTaGGAGGTGCTTGGTAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VVLNGPSAFESFPPKSLWSTHAV*EVLGRH Trigger: ATGCCTACCAAGCACCTCTCAGACAGCGTGTGTGCT...CCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCATTCAGGACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGATTTCCCAGGGATTGCTaGACATCCTCTTCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPSAFESFPPKSLWAARRFPRDC*TSSSGP Trigger: TGGACCTGAAGAGGATGTTCAGCAATCCCTGGGAAA...TCTCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGACTCTGGGGAGAGGTCTaGCATATCAACCTGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GPSAFESFPPKSLWAARRLWGEV*HINLTE Trigger: TTCTGTCAGGTTGATATGTCAGACCTCTCCCCAGAG...TCTCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106953.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGTCCAGCTTTGCAGCCAGCTCATGGAGCTTTATTCAGATGTGATGACAAGACGCTGTCTGAGAGGTaGTTGGTAGGCATGCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: ACPALQPAHGALFRCDDKTLSER*LVGMPD Trigger: GTCGGGCATGCCTACCAAGCACCTCTCAGACAGCGT...CTTGTCATCACATCTGAATAAAGCTCCATGAGCTGGCTGCAAAGCTGGACACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096639.12 |
||
| CDS-3UTR TCA 90 bp | TTCAAATGGGCCAGGCCAAATTTCTCTAGACACCCAGTGCTGCTGACCCATGATGCAGCTGTCCATACATaGCATGAGGCCTTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKWARPNFSRHPVLLTHDAAVHT*HEAFPR Trigger: CCTGGGAAAGGCCTCATGTCATGTATGGACAGCTGC...ATCATGGGTCAGCAGCACTGGGTGTCTAGAGAAATTTGGCCTGGCCCATTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR GCA 90 bp | TTGCTTTTATACTCTGCCTGGCAATGGCCCTGCTCAGGGGCAGGTTATCCATGCCCACGATGTTTGGCATaGATTCGAGCATGTTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLLYSAWQWPCSGAGYPCPRCLA*IRACST Trigger: GGTCGAACATGCTCGAATGCATGCCAAACATCGTGG...GCATGGATAACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR GCA 90 bp | TTTGCCCAACCCTGTTCAAGCAAGGTTAGGCCTAGGAATGGGGGACAATTCCTAAGGACCATTTCAGCGTaGATGGCTTCGTGGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: FAQPCSSKVRPRNGGQFLRTISA*MASWPR Trigger: TCGTGGCCACGAAGCCATGCACGCTGAAATGGTCCT...TAGGAATTGTCCCCCATTCCTAGGCCTAACCTTGCTTGAACAGGGTTGGGCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR GCA 90 bp | CCCATCATGTCCAGAGATGAAGAGACCCTTTACCGCTCAGTGCTAATCTGGCACTCCACAAAGATCTGCTaGCCACACACAGCACACACG | + |
|
Preference number: 4 (lower is better) Translates to: PIMSRDEETLYRSVLIWHSTKIC*PHTAHT Trigger: CGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGA...GTGCCAGATTAGCACTGAGCGGTAAAGGGTCTCTTCATCTCTGGACATGATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR GCA 90 bp | TGCCCTCCCCCTTTCTTCAGACTTCCAGGACTACAGTTAGGCCTGCTCAGAAGTACATCCACAAAGATCTaGTGCCCACACACAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CPPPFFRLPGLQLGLLRSTSTKI*CPHTAH Trigger: GTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGATGT...ACTTCTGAGCAGGCCTAACTGTAGTCCTGGAAGTCTGAAGAAAGGGGGAGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR TCA 90 bp | CCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGAGTGGGAACAACCCACATCTaGAAGAGGGTCACCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: PSAFESFPPKSLWAARRVGTTHI*KRVTIL Trigger: CAATATGGTGACCCTCTTTCAGATGTGGGTTGTTCC...CACTCTCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGAGTAGAACCCTATGGTTaGTGCCATATAGTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GPSAFESFPPKSLWAARRVEPYG*CHIVCT Trigger: TGTGCAGACTATATGGCATCAACCATAGGGTTCTAC...TCTCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR TCA 90 bp | CCCATCATGTCCAGAGATGAAGAGACCCTTTACCGCTCAGTGCTAATCTGGCACTTTCCCAGGGATTGCTaGACATCCTCTTCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PIMSRDEETLYRSVLIWHFPRDC*TSSSGP Trigger: TGGACCTGAAGAGGATGTTCAGCAATCCCTGGGAAA...GTGCCAGATTAGCACTGAGCGGTAAAGGGTCTCTTCATCTCTGGACATGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR TCA 90 bp | GTGGTCCTGAATGGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGTTTCCCAGGGATTGCTaGACATCCTCTTCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVLNGPSAFESFPPKSLWFPRDC*TSSSGP Trigger: TGGACCTGAAGAGGATGTTCAGCAATCCCTGGGAAA...CCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCATTCAGGACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGAAGACGCCTCTCAACCAATAATACCGCAGCTTTGCCCAACCCTGTTCAATCCACAAAGATCTGCTaGCCACACACAGCACACACG | + |
|
Preference number: 4 (lower is better) Translates to: VRRRLSTNNTAALPNPVQSTKIC*PHTAHT Trigger: CGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGA...TTGAACAGGGTTGGGCAAAGCTGCGGTATTATTGGTTGAGAGGCGTCTTCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR GCA 90 bp | CTGAATGGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCAACATCCACAAAGATCTaGTGCCCACACACAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LNGPSAFESFPPKSLWAATSTKI*CPHTAH Trigger: GTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGATGT...TGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR GCA 90 bp | ATTGCTTTTATACTCTGCCTGGCAATGGCCCTGCTCAGGGGCAGGTTATCCATGCCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA | + |
|
Preference number: 4 (lower is better) Translates to: IAFILCLAMALLRGRLSMPMMTG*QATKYR Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...CATGGATAACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR GCA 90 bp | CTGAATGGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACCAATGATGACAGGCTaGCAGGCTACCAAGTATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LNGPSAFESFPPKSLWAAPMMTG*QATKYR Trigger: TCGATACTTGGTAGCCTGGCAGCCTGTCATCATTGG...TGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR CCA 90 bp | CTGAATGGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGTGGCCACGATGTTTaGCATGCATTCGAGCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LNGPSAFESFPPKSLWAARGHDV*HAFEHV Trigger: AACATGCTCGAATGCATGCCAAACATCGTGGCCACG...TGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCCCAACCCTGTTCAAGCAAGGTTAGGCCTAGGAATGGGGGACAATTCCTACCATTTCAGCGTGCATaGCTTCGTGGCCACGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FAQPCSSKVRPRNGGQFLPFQRA*LRGHDV Trigger: AACATCGTGGCCACGAAGCCATGCACGCTGAAATGG...TAGGAATTGTCCCCCATTCCTAGGCCTAACCTTGCTTGAACAGGGTTGGGCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR TCA 90 bp | CTGAATGGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCAGGAACAACCCACATCTaGAAGAGGGTCACCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: LNGPSAFESFPPKSLWAAGTTHI*KRVTIL Trigger: CAATATGGTGACCCTCTTTCAGATGTGGGTTGTTCC...TGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCATTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTTTTATACTCTGCCTGGCAATGGCCCTGCTCAGGGGCAGGTTATCCATGCGTAGAACCCTATGGTTaGTGCCATATAGTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLYSAWQWPCSGAGYPCVEPYG*CHIVCT Trigger: TGTGCAGACTATATGGCATCAACCATAGGGTTCTAC...GCATGGATAACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR TCA 90 bp | TTCAGGAAGGAAGTGATGTGCAGAGTACCCTTTGGCACATGTCAACACTTCCATAGCACACACGCTGTCTaGGAGGTGCTTGGTAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FRKEVMCRVPFGTCQHFHSTHAV*EVLGRH Trigger: ATGCCTACCAAGCACCTCTCAGACAGCGTGTGTGCT...ATGGAAGTGTTGACATGTGCCAAAGGGTACTCTGCACATCACTTCCTTCCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR GCA 90 bp | ATGGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGTCTGCACACATTTCTaGAAAGTCACGCTCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MAQVPLSLFHPSLCGQHGVCTHF*KVTLKN Trigger: GTTCTTGAGCGTGACTTTGCAGAAATGTGTGCAGAC...TCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR CCA 90 bp | CATACACAACACCCATCATGTCCAGAGATGAAGAGACCCTTTACCGCTCAGTGCCGTGGCCACGATGTTTaGCATGCATTCGAGCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTQHPSCPEMKRPFTAQCRGHDV*HAFEHV Trigger: AACATGCTCGAATGCATGCCAAACATCGTGGCCACG...GCACTGAGCGGTAAAGGGTCTCTTCATCTCTGGACATGATGGGTGTTGTGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR GCA 90 bp | AGTCTTTGTGGGCAGCACGGAGAGTGCCCTGAGGTCCATAGTGGGTGGTGGGTTAATGCCAAAGTCCATTaGATCTTCTGGTTTAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCGQHGECPEVHSGWWVNAKVH*IFWFNL Trigger: AAGATTAAACCAGAAGATGCAATGGACTTTGGCATT...AACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCACAAAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCCATGAAGGGTGTACTTGCACAAGAAGCTGCAACATTCGCTGCTGCCAATACATCCACAAAGATCTaGTGCCCACACACAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TSMKGVLAQEAATFAAANTSTKI*CPHTAH Trigger: GTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGATGT...ATTGGCAGCAGCGAATGTTGCAGCTTCTTGTGCAAGTACACCCTTCATGGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR GCA 90 bp | GACGCCTCTCAACCAATAATACCGCAGCTTTGCCCAACCCTGTTCAAGCAAGGTCATGGAATACGTGATTaGAGGAAAGCCTGTACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DASQPIIPQLCPTLFKQGHGIRD*RKACTC Trigger: ACACGTACAGGCTTTCCTGCAATCACGTATTCCATG...ACCTTGCTTGAACAGGGTTGGGCAAAGCTGCGGTATTATTGGTTGAGAGGCGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR CCA 90 bp | CAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGAGTGCCACTGTAGAACCCTATaGTTGATGCCATATAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVPLSLFHPSLCGQHGECHCRTL*LMPYSL Trigger: CAGACTATATGGCATCAACCATAGGGTTCTACAGTG...GCACTCTCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGACACTGTAGAACCCTATaGTTGATGCCATATAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MAQVPLSLFHPSLCGQHGHCRTL*LMPYSL Trigger: CAGACTATATGGCATCAACCATAGGGTTCTACAGTG...TCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGAGTGCACTGTAGAACCCTATaGTTGATGCCATATAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSAFESFPPKSLWAARRVHCRTL*LMPYSL Trigger: CAGACTATATGGCATCAACCATAGGGTTCTACAGTG...CACTCTCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR TCA 90 bp | CTGAATGGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCAAATTCATGGAATACGTaGTTGCAGGAAAGCCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LNGPSAFESFPPKSLWAANSWNT*LQESLY Trigger: GTACAGGCTTTCCTGCAATCACGTATTCCATGAATT...TGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCATTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAAAACAGAGATCCATTAGTCTGTCTGCTCTGTGCATACACAAACATACACGCAGCTGTCCATACATaGCATGAGGCCTTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AENRDPLVCLLCAYTNIHAAVHT*HEAFPR Trigger: CCTGGGAAAGGCCTCATGTCATGTATGGACAGCTGC...GTGTATGTTTGTGTATGCACAGAGCAGACAGACTAATGGATCTCTGTTTTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR GCA 90 bp | TTCAAATGGGCCAGGCCAAATTTCTCTAGACACCCAGTGCTGCTGACCCATGATGTCTGCACACATTTCTaGAAAGTCACGCTCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FKWARPNFSRHPVLLTHDVCTHF*KVTLKN Trigger: GTTCTTGAGCGTGACTTTGCAGAAATGTGTGCAGAC...ATCATGGGTCAGCAGCACTGGGTGTCTAGAGAAATTTGGCCTGGCCCATTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR GCA 90 bp | GCGTGTCCAGCTTTGCAGCCAGCTCATGGAGCTTTATTCAGATGTGATGACAAGCATGGAATACGTGATTaGAGGAAAGCCTGTACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACPALQPAHGALFRCDDKHGIRD*RKACTC Trigger: ACACGTACAGGCTTTCCTGCAATCACGTATTCCATG...CTTGTCATCACATCTGAATAAAGCTCCATGAGCTGGCTGCAAAGCTGGACACGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096639.12 |
||
| CDS-3UTR TCA 90 bp | CATACACAACACCCATCATGTCCAGAGATGAAGAGACCCTTTACCGCTCAGTGCTGCCAGTGGCATAGCTaGTTTTATAGATCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HTQHPSCPEMKRPFTAQCCQWHS*FYRSAE Trigger: TTCTGCTGATCTATAAAATCAGCTATGCCACTGGCA...GCACTGAGCGGTAAAGGGTCTCTTCATCTCTGGACATGATGGGTGTTGTGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR GCA 90 bp | CAAGATCCTGTTTGGTTCTTGTTGCCTTCAAATGGGCCAGGCCAAATTTCTCTACCACGATGTTTGGCATaGATTCGAGCATGTTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: QDPVWFLLPSNGPGQISLPRCLA*IRACST Trigger: GGTCGAACATGCTCGAATGCATGCCAAACATCGTGG...TAGAGAAATTTGGCCTGGCCCATTTGAAGGCAACAAGAACCAAACAGGATCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
||
| CDS-3UTR CCA 90 bp | GCAGAAAACAGAGATCCATTAGTCTGTCTGCTCTGTGCATACACAAACATACACCCATTTCAGCGTGCATaGCTTCGTGGCCACGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: AENRDPLVCLLCAYTNIHPFQRA*LRGHDV Trigger: AACATCGTGGCCACGAAGCCATGCACGCTGAAATGG...GTGTATGTTTGTGTATGCACAGAGCAGACAGACTAATGGATCTCTGTTTTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR GCA 90 bp | CCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGAGTGAATGCCAAAGTCCATTaGATCTTCTGGTTTAATCTT | + |
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Preference number: 4 (lower is better) Translates to: PSAFESFPPKSLWAARRVNAKVH*IFWFNL Trigger: AAGATTAAACCAGAAGATGCAATGGACTTTGGCATT...CACTCTCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS-3UTR CCA 90 bp | CCAGCTCATGGAGCTTTATTCAGATGTGATGACAAGATCCTGTTTGGTTCTTGTCGTGGCCACGATGTTTaGCATGCATTCGAGCATGTT | + |
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Preference number: 4 (lower is better) Translates to: PAHGALFRCDDKILFGSCRGHDV*HAFEHV Trigger: AACATGCTCGAATGCATGCCAAACATCGTGGCCACG...ACAAGAACCAAACAGGATCTTGTCATCACATCTGAATAAAGCTCCATGAGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR TCA 90 bp | TTTCAGGAAGGAAGTGATGTGCAGAGTACCCTTTGGCACATGTCAACACTTCCATGCCAGTGGCATAGCTaGTTTTATAGATCAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: FQEGSDVQSTLWHMSTLPCQWHS*FYRSAE Trigger: TTCTGCTGATCTATAAAATCAGCTATGCCACTGGCA...TGGAAGTGTTGACATGTGCCAAAGGGTACTCTGCACATCACTTCCTTCCTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR TCA 90 bp | GTCTGCTCTGTGCATACACAAACATACACACTCTTAGGCTTTCAGGAAGGAAGTGTAGAACCCTATGGTTaGTGCCATATAGTCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: VCSVHTQTYTLLGFQEGSVEPYG*CHIVCT Trigger: TGTGCAGACTATATGGCATCAACCATAGGGTTCTAC...ACTTCCTTCCTGAAAGCCTAAGAGTGTGTATGTTTGTGTATGCACAGAGCAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR GCA 90 bp | GACGCCTCTCAACCAATAATACCGCAGCTTTGCCCAACCCTGTTCAAGCAAGGTAATGCCAAAGTCCATTaGATCTTCTGGTTTAATCTT | + |
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Preference number: 4 (lower is better) Translates to: DASQPIIPQLCPTLFKQGNAKVH*IFWFNL Trigger: AAGATTAAACCAGAAGATGCAATGGACTTTGGCATT...ACCTTGCTTGAACAGGGTTGGGCAAAGCTGCGGTATTATTGGTTGAGAGGCGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR GCA 90 bp | CCAGCTCATGGAGCTTTATTCAGATGTGATGACAAGATCCTGTTTGGTTCTTGTGTCTGCACACATTTCTaGAAAGTCACGCTCAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: PAHGALFRCDDKILFGSCVCTHF*KVTLKN Trigger: GTTCTTGAGCGTGACTTTGCAGAAATGTGTGCAGAC...ACAAGAACCAAACAGGATCTTGTCATCACATCTGAATAAAGCTCCATGAGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR TCA 90 bp | AGAGATCCATTAGTCTGTCTGCTCTGTGCATACACAAACATACACACTCTTAGGAATTCATGGAATACGTaGTTGCAGGAAAGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: RDPLVCLLCAYTNIHTLRNSWNT*LQESLY Trigger: GTACAGGCTTTCCTGCAATCACGTATTCCATGAATT...CCTAAGAGTGTGTATGTTTGTGTATGCACAGAGCAGACAGACTAATGGATCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR TCA 90 bp | CCAGCTCATGGAGCTTTATTCAGATGTGATGACAAGATCCTGTTTGGTTCTTGTAATTCATGGAATACGTaGTTGCAGGAAAGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: PAHGALFRCDDKILFGSCNSWNT*LQESLY Trigger: GTACAGGCTTTCCTGCAATCACGTATTCCATGAATT...ACAAGAACCAAACAGGATCTTGTCATCACATCTGAATAAAGCTCCATGAGCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR CAA 90 bp | GTGGGCAGCACGGAGAGTGCCCTGAGGTCCATAGTGGGTGGTGGGTTCTCCAGGGATGTAGCTGATGCCTaGTACCAGGCCAATGATGAC | + |
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Preference number: 5 (lower is better) Translates to: VGSTESALRSIVGGGFSRDVADA*YQANDD Trigger: GTCATCATTGGCCTGGTACAAGGCATCAGCTACATC...CCTGGAGAACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS GCA 90 bp | AGGACCATTTCAGCGTGCATGGCTTCGTGGCCACGATGTTTGGCATaGATTCGAGCATGTTCGACCCTCCACTGCTCCTCTGGGGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: RTISACMASWPRCLA*IRACSTLHCSSGER Trigger: CCTCTCCCCAGAGGAGCAGTGGAGGGTCGAACATGCTCGAATGCATGCCAAACATCGTGGCCACGAAGCCATGCACGCTGAAATGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 ENSMUST00000130074.2 ENSMUST00000131104.3 |
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| CDS-3UTR CAA 90 bp | GTGGGCAGCACGGAGAGTGCCCTGAGGTCCATAGTGGGTGGTGGGTTCTCCAGGATGATGCCCTCTTCATaGACATCCACAAAGATCTGC | + |
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Preference number: 5 (lower is better) Translates to: VGSTESALRSIVGGGFSRMMPSS*TSTKIC Trigger: GCAGATCTTTGTGGATGTCAATGAAGAGGGCATCAT...CCTGGAGAACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS-3UTR CAA 90 bp | AGTCTTTGTGGGCAGCACGGAGAGTGCCCTGAGGTCCATAGTGGGTGGTGGGTTAAACCAACCTTGGGGTaGTCTGTACTAGAGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SLCGQHGECPEVHSGWWVKPTLG*SVLEAS Trigger: GGAAGCCTCTAGTACAGACAACCCCAAGGTTGGTTT...AACCCACCACCCACTATGGACCTCAGGGCACTCTCCGTGCTGCCCACAAAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS-3UTR CAA 90 bp | CAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGAGTGCCTGTCTGAGAGGTGCTaGGTAGGCATGCCCGACTCA | + |
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Preference number: 5 (lower is better) Translates to: QVPLSLFHPSLCGQHGECLSERC*VGMPDS Trigger: TGAGTCGGGCATGCCTACCAAGCACCTCTCAGACAG...GCACTCTCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS GCA 90 bp | TGGGCCACCACCAAGGTAGCAATGAGGATGAGGACCATTTCAGCGTaGATGGCTTCGTGGCCACGATGTTTGGCATGCATTCGAGCATGT | + |
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Preference number: 5 (lower is better) Translates to: WATTKVAMRMRTISA*MASWPRCLACIRAC Trigger: ACATGCTCGAATGCATGCCAAACATCGTGGCCACGAAGCCATGCACGCTGAAATGGTCCTCATCCTCATTGCTACCTTGGTGGTGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 ENSMUST00000130074.2 ENSMUST00000131104.3 |
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| CDS-3UTR CAA 90 bp | GACGCCTCTCAACCAATAATACCGCAGCTTTGCCCAACCCTGTTCAAGCAAGGTCTGTCTGAGAGGTGCTaGGTAGGCATGCCCGACTCA | + |
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Preference number: 5 (lower is better) Translates to: DASQPIIPQLCPTLFKQGLSERC*VGMPDS Trigger: TGAGTCGGGCATGCCTACCAAGCACCTCTCAGACAG...ACCTTGCTTGAACAGGGTTGGGCAAAGCTGCGGTATTATTGGTTGAGAGGCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS GCA 90 bp | GTGTTCTCGATGATGCCCTCTTCATTGACATCCACAAAGATCTGCTaGCCACACACAGCACACACGCTGTCTGAGAGGTGCTTGGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: VFSMMPSSLTSTKIC*PHTAHTLSERCLVG Trigger: GCCTACCAAGCACCTCTCAGACAGCGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGATGTCAATGAAGAGGGCATCATCGAGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS CCA 90 bp | AAGGTAGCAATGAGGATGAGGACCATTTCAGCGTGCATGGCTTCGTaGCCACGATGTTTGGCATGCATTCGAGCATGTTCGACCCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: KVAMRMRTISACMAS*PRCLACIRACSTLH Trigger: GTGGAGGGTCGAACATGCTCGAATGCATGCCAAACATCGTGGCCACGAAGCCATGCACGCTGAAATGGTCCTCATCCTCATTGCTACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 ENSMUST00000130074.2 ENSMUST00000131104.3 |
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| CDS-3UTR CAA 90 bp | AATACCGCAGCTTTGCCCAACCCTGTTCAAGCAAGGTTAGGCCTAGGAATGGGGAAACCAACCTTGGGGTaGTCTGTACTAGAGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: NTAALPNPVQARLGLGMGKPTLG*SVLEAS Trigger: GGAAGCCTCTAGTACAGACAACCCCAAGGTTGGTTT...CCCCATTCCTAGGCCTAACCTTGCTTGAACAGGGTTGGGCAAAGCTGCGGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS GCA 90 bp | TACGTGTTCTCGATGATGCCCTCTTCATTGACATCCACAAAGATCTaGTGCCCACACACAGCACACACGCTGTCTGAGAGGTGCTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: YVFSMMPSSLTSTKI*CPHTAHTLSERCLV Trigger: TACCAAGCACCTCTCAGACAGCGTGTGTGCTGTGTGTGGGCAGCAGATCTTTGTGGATGTCAATGAAGAGGGCATCATCGAGAACACGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS-3UTR CAA 90 bp | ATTGCTTTTATACTCTGCCTGGCAATGGCCCTGCTCAGGGGCAGGTTATCCATGGATGTAGCTGATGCCTaGTACCAGGCCAATGATGAC | + |
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Preference number: 5 (lower is better) Translates to: IAFILCLAMALLRGRLSMDVADA*YQANDD Trigger: GTCATCATTGGCCTGGTACAAGGCATCAGCTACATC...CATGGATAACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR CAA 90 bp | ATTGCTTTTATACTCTGCCTGGCAATGGCCCTGCTCAGGGGCAGGTTATCCATGTGTAGAACCCTATGGTaGATGCCATATAGTCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: IAFILCLAMALLRGRLSMCRTLW*MPYSLH Trigger: GTGCAGACTATATGGCATCAACCATAGGGTTCTACA...CATGGATAACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR CAA 90 bp | CTGAATGGCCCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCATGTAGAACCCTATGGTaGATGCCATATAGTCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: LNGPSAFESFPPKSLWAACRTLW*MPYSLH Trigger: GTGCAGACTATATGGCATCAACCATAGGGTTCTACA...TGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGGGCCATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS-3UTR CAA 90 bp | CCAAGTGCCTTTGAGTCTTTTCCACCCAAGTCTTTGTGGGCAGCACGGAGAGTGATTTATAAACCAACCTaGGGGTTGTCTGTACTAGAG | + |
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Preference number: 5 (lower is better) Translates to: PSAFESFPPKSLWAARRVIYKPT*GLSVLE Trigger: CTCTAGTACAGACAACCCCAAGGTTGGTTTATAAAT...CACTCTCCGTGCTGCCCACAAAGACTTGGGTGGAAAAGACTCAAAGGCACTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS-3UTR CAA 90 bp | GTGAGAAGACGCCTCTCAACCAATAATACCGCAGCTTTGCCCAACCCTGTTCAAATGATGCCCTCTTCATaGACATCCACAAAGATCTGC | + |
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Preference number: 5 (lower is better) Translates to: VRRRLSTNNTAALPNPVQMMPSS*TSTKIC Trigger: GCAGATCTTTGTGGATGTCAATGAAGAGGGCATCAT...TTGAACAGGGTTGGGCAAAGCTGCGGTATTATTGGTTGAGAGGCGTCTTCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR CAA 90 bp | ATTGCTTTTATACTCTGCCTGGCAATGGCCCTGCTCAGGGGCAGGTTATCCATGATTTATAAACCAACCTaGGGGTTGTCTGTACTAGAG | + |
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Preference number: 5 (lower is better) Translates to: IAFILCLAMALLRGRLSMIYKPT*GLSVLE Trigger: CTCTAGTACAGACAACCCCAAGGTTGGTTTATAAAT...CATGGATAACCTGCCCCTGAGCAGGGCCATTGCCAGGCAGAGTATAAAAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR CAA 90 bp | ACTTCCATGAAGGGTGTACTTGCACAAGAAGCTGCAACATTCGCTGCTGCCAATTGTAGAACCCTATGGTaGATGCCATATAGTCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: TSMKGVLAQEAATFAAANCRTLW*MPYSLH Trigger: GTGCAGACTATATGGCATCAACCATAGGGTTCTACA...ATTGGCAGCAGCGAATGTTGCAGCTTCTTGTGCAAGTACACCCTTCATGGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR CAA 90 bp | CAAGATCCTGTTTGGTTCTTGTTGCCTTCAAATGGGCCAGGCCAAATTTCTCTAGATGTAGCTGATGCCTaGTACCAGGCCAATGATGAC | + |
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Preference number: 5 (lower is better) Translates to: QDPVWFLLPSNGPGQISLDVADA*YQANDD Trigger: GTCATCATTGGCCTGGTACAAGGCATCAGCTACATC...TAGAGAAATTTGGCCTGGCCCATTTGAAGGCAACAAGAACCAAACAGGATCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS-3UTR CAA 90 bp | CCAGCTCATGGAGCTTTATTCAGATGTGATGACAAGATCCTGTTTGGTTCTTGTAAACCAACCTTGGGGTaGTCTGTACTAGAGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: PAHGALFRCDDKILFGSCKPTLG*SVLEAS Trigger: GGAAGCCTCTAGTACAGACAACCCCAAGGTTGGTTT...ACAAGAACCAAACAGGATCTTGTCATCACATCTGAATAAAGCTCCATGAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 |
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| CDS CAA 90 bp | AGGATGAGGACCATTTCAGCGTGCATGGCTTCGTGGCCACGATGTTaGGCATGCATTCGAGCATGTTCGACCCTCCACTGCTCCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RMRTISACMASWPRC*ACIRACSTLHCSSG Trigger: CCCAGAGGAGCAGTGGAGGGTCGAACATGCTCGAATGCATGCCAAACATCGTGGCCACGAAGCCATGCACGCTGAAATGGTCCTCATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 ENSMUST00000130074.2 ENSMUST00000131104.3 |
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| CDS CAA 72 bp | ACCATTTCAGCGTGCATGGCTTCGTGGCCACGATGTTaGGCATGCATTCGAGCATGTTCGACCCTCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: TISACMASWPRC*ACIRACSTLHC Trigger: GCAGTGGAGGGTCGAACATGCTCGAATGCATGCCAAACATCGTGGCCACGAAGCCATGCACGCTGAAATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 ENSMUST00000130074.2 ENSMUST00000131104.3 |
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| CDS GCA 72 bp | TGTTTGGCATGCATTCGAGCATGTTCGACCCTCCACTaGTCCTCTGGGGAGAGGTCTGACATATCAACCTCA | + |
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Preference number: 6 (lower is better) Translates to: CLACIRACSTLH*SSGERSDISTS Trigger: TGAGGTTGATATGTCAGACCTCTCCCCAGAGGAGCAGTGGAGGGTCGAACATGCTCGAATGCATGCCAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096639.12 ENSMUST00000131104.3 |
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| CDS CCA 72 bp | ATGAGGATGAGGACCATTTCAGCGTGCATGGCTTCGTaGCCACGATGTTTGGCATGCATTCGAGCATGTTCG | + |
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Preference number: 6 (lower is better) Translates to: MRMRTISACMAS*PRCLACIRACS Trigger: CGAACATGCTCGAATGCATGCCAAACATCGTGGCCACGAAGCCATGCACGCTGAAATGGTCCTCATCCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 ENSMUST00000130074.2 ENSMUST00000131104.3 |
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| CDS GCA 72 bp | ACCAAGGTAGCAATGAGGATGAGGACCATTTCAGCGTaGATGGCTTCGTGGCCACGATGTTTGGCATGCATT | + |
|
Preference number: 6 (lower is better) Translates to: TKVAMRMRTISA*MASWPRCLACI Trigger: AATGCATGCCAAACATCGTGGCCACGAAGCCATGCACGCTGAAATGGTCCTCATCCTCATTGCTACCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 ENSMUST00000130074.2 ENSMUST00000131104.3 |
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| CDS CAA 72 bp | GAAAGCCTGTACGTGTTCTCGATGATGCCCTCTTCATaGACATCCACAAAGATCTGCTGCCCACACACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ESLYVFSMMPSS*TSTKICCPHTA Trigger: TGCTGTGTGTGGGCAGCAGATCTTTGTGGATGTCAATGAAGAGGGCATCATCGAGAACACGTACAGGCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 |
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| CDS TCA 72 bp | AGATCACCAAGAACCTCCACCAATGCAGCTTCACTGTaGAATAGAGGGGAACAACCCACATCTGAAAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSPRTSTNAASL*NRGEQPTSERG Trigger: CCCTCTTTCAGATGTGGGTTGTTCCCCTCTATTTCACAGTGAAGCTGCATTGGTGGAGGTTCTTGGTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089052.11 ENSMUST00000096639.12 ENSMUST00000106953.8 ENSMUST00000131104.3 |
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| CDS GCA 72 bp | GAGGCCATAGAAGAGAAGAGAAATGCCAAAGTCCATTaGATCTTCTGGTTTAATCCTTGGGGTTGTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: EAIEEKRNAKVH*IFWFNPWGCLY Trigger: GTACAGACAACCCCAAGGATTAAACCAGAAGATGCAATGGACTTTGGCATTTCTCTTCTCTTCTATGGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131104.3 |
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