Pregenerated sensors for RNF114 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006418Ensembl transcript IDs: ENSMUST00000078050.7, ENSMUST00000109214.8, ENSMUST00000127939.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGGCTTGGCCCTGGCAGGCAGAGGCACCACTGTGGAGGCGTGGTaGCACAAGTACAATGTTACATGCAGTCTCAGATGGACCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: AGLALAGRGTTVEAW*HKYNVTCSLRWTRA Trigger: GGCTCTGGTCCATCTGAGACTGCATGTAACATTGTACTTGTGGCACCACGCCTCCACAGTGGTGCCTCTGCCTGCCAGGGCCAAGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR CCA 90 bp | CCCCATCAGACTGCGATGTCACCCAGGAGGAGAGGAGCAGAGCCCTaGCCCAGTAAACTGCAGAACCAAGGCACCTCAGGGCCAAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: PHQTAMSPRRRGAEP*PSKLQNQGTSGPRK Trigger: TTTCCTTGGCCCTGAGGTGCCTTGGTTCTGCAGTTTACTGGGCCAGGGCTCTGCTCCTCTCCTCCTGGGTGACATCGCAGTCTGATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR CCA 90 bp | TGGGCTGGCTTGGCCCTGGCAGGCAGAGGCACCACTGTGGAGGCGTaGTGCCACAAGTACAATGTTACATGCAGTCTCAGATGGACCAGA | + |
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Preference number: 1 (lower is better) Translates to: WAGLALAGRGTTVEA*CHKYNVTCSLRWTR Trigger: TCTGGTCCATCTGAGACTGCATGTAACATTGTACTTGTGGCACCACGCCTCCACAGTGGTGCCTCTGCCTGCCAGGGCCAAGCCAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR CCA 90 bp | CTGGCATCTGGGCTGGCTTGGCCCTGGCAGGCAGAGGCACCACTGTaGAGGCGTGGTGCCACAAGTACAATGTTACATGCAGTCTCAGAT | + |
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Preference number: 1 (lower is better) Translates to: LASGLAWPWQAEAPL*RRGATSTMLHAVSD Trigger: ATCTGAGACTGCATGTAACATTGTACTTGTGGCACCACGCCTCCACAGTGGTGCCTCTGCCTGCCAGGGCCAAGCCAGCCCAGATGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR TCA 90 bp | AACCTTTCCAGAGGGTACAGTGAAGAAGCAGTAACGTTGGGAAAATaGTCCTGTCCGACTCTGCTGGCATCTGGGCTGGCTTGGCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: NLSRGYSEEAVTLGK*SCPTLLASGLAWPW Trigger: CCAGGGCCAAGCCAGCCCAGATGCCAGCAGAGTCGGACAGGATCATTTTCCCAACGTTACTGCTTCTTCACTGTACCCTCTGGAAAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR TCA 90 bp | GAAGAAGCTGGGCTCTTCTTAAAGCAGGCAGTAGCTGAGGTGTGGTaGAAGCAGACCATGGGACAAACAAGGTCACCAGTGGGGAAGACA | + |
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Preference number: 1 (lower is better) Translates to: EEAGLFLKQAVAEVW*KQTMGQTRSPVGKT Trigger: TGTCTTCCCCACTGGTGACCTTGTTTGTCCCATGGTCTGCTTTCACCACACCTCAGCTACTGCCTGCTTTAAGAAGAGCCCAGCTTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR TCA 90 bp | AGTTGCTCGGGGCAGGTCTTGTTGAACCTCCCTCCACACATCTCCTaGGCAAACCTTTCCAGAGGGTACAGTGAAGAAGCAGTAACGTTG | + |
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Preference number: 1 (lower is better) Translates to: SCSGQVLLNLPPHIS*ANLSRGYSEEAVTL Trigger: CAACGTTACTGCTTCTTCACTGTACCCTCTGGAAAGGTTTGCTCAGGAGATGTGTGGAGGGAGGTTCAACAAGACCTGCCCCGAGCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR TCA 90 bp | GACCCTGTCTGGTGCCATGGCTCAATTCCAGATCTGCATTACATGTaGGGTGCAAGAGTCAAGGGCTCACACCTAATGCACAATGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: DPVWCHGSIPDLHYM*GARVKGSHLMHNGS Trigger: GCTTCCATTGTGCATTAGGTGTGAGCCCTTGACTCTTGCACCTCACATGTAATGCAGATCTGGAATTGAGCCATGGCACCAGACAGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR TCA 90 bp | TCCTGTAGGAGAAGAAGCTGGGCTCTTCTTAAAGCAGGCAGTAGCTaGGGTGTGGTGAAAGCAGACCATGGGACAAACAAGGTCACCAGT | + |
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Preference number: 1 (lower is better) Translates to: SCRRRSWALLKAGSS*GVVKADHGTNKVTS Trigger: ACTGGTGACCTTGTTTGTCCCATGGTCTGCTTTCACCACACCTCAGCTACTGCCTGCTTTAAGAAGAGCCCAGCTTCTTCTCCTACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR GCA 90 bp | TACTGCTCAGGCTCATCAAGTTACCAAGCAGCACCCAGCAGTCGGTaGCTCCCTCCAACACTCTTCAGAGCAAGAATGTCAGCATATACT | + |
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Preference number: 1 (lower is better) Translates to: YCSGSSSYQAAPSSR*LPPTLFRARMSAYT Trigger: AGTATATGCTGACATTCTTGCTCTGAAGAGTGTTGGAGGGAGGCACCGACTGCTGGGTGCTGCTTGGTAACTTGATGAGCCTGAGCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR TCA 90 bp | AGGCACAGATGGGACAAACCACAGACTTGGTATCGGTGCTGTGAGTaGGTTTGCAGTGCTCCACGAGTCCTTCCTGATCAAAGTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: RHRWDKPQTWYRCCE*VCSAPRVLPDQSSS Trigger: AGAAGAACTTTGATCAGGAAGGACTCGTGGAGCACTGCAAACTCACTCACAGCACCGATACCAAGTCTGTGGTTTGTCCCATCTGTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
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| 3UTR TCA 90 bp | AGCTCTAGAGTGAGGTGGACAGCCAGGACCCGATTCATTGGTCAATaGTGGAGCGCTGCAACACCTGGTTTATCATGTCATCTTCATCAA | + |
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Preference number: 1 (lower is better) Translates to: SSRVRWTARTRFIGQ*WSAATPGLSCHLHQ Trigger: TTGATGAAGATGACATGATAAACCAGGTGTTGCAGCGCTCCATCATTGACCAATGAATCGGGTCCTGGCTGTCCACCTCACTCTAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
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| 3UTR GCA 90 bp | CACCCTACACCTTCTCCCTACTTACACATGAACACACCCCATCTTTaGTACCCAACATTTCCACTACAATTCTATGGTGATACCTTATCC | + |
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Preference number: 1 (lower is better) Translates to: HPTPSPYLHMNTPHL*YPTFPLQFYGDTLS Trigger: GGATAAGGTATCACCATAGAATTGTAGTGGAAATGTTGGGTAGCAAAGATGGGGTGTGTTCATGTGTAAGTAGGGAGAAGGTGTAGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGACAATGCTGGCAAGAGCCCAGAGGAAACAGGGCTCTCTCTGCCCTAGGGGGCCCCATCACCCTTaGAGAAGTGACCCTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GKTMLARAQRKQGSLCPRGPHHP*RSDPVW Trigger: CCAGACAGGGTCACTTCTTCAAGGGTGATGGGGCCC...CCTAGGGCAGAGAGAGCCCTGTTTCCTCTGGGCTCTTGCCAGCATTGTCTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTCATCAAGTTACCAAGCAGCACCCAGCAGTCGGTGCCTCCCTCCAACACTCCTTCCCCCATCAGACTaGGATGTCACCCAGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GSSSYQAAPSSRCLPPTLLPPSD*DVTQEE Trigger: CTCCTCCTGGGTGACATCGCAGTCTGATGGGGGAAG...GAGTGTTGGAGGGAGGCACCGACTGCTGGGTGCTGCTTGGTAACTTGATGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCCTGCTGCACTGTGGCACACCTGTGCCTTTCCCAGTTGCTCGGGGCAGGCTCCCTACTTACACATaGACACACCCCATCTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: RSLLHCGTPVPFPVARGRLPTYT*THPIFA Trigger: AGCAAAGATGGGGTGTGTTCATGTGTAAGTAGGGAG...CCTGCCCCGAGCAACTGGGAAAGGCACAGGTGTGCCACAGTGCAGCAGGGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTCCCTGCTGCACTGTGGCACACCTGTGCCTTTCCCAGTTGCTCGGGGCAGGGCATTACATGTGAGGTaGAAGAGTCAAGGGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: RSLLHCGTPVPFPVARGRALHVR*KSQGLT Trigger: TGTGAGCCCTTGACTCTTGCACCTCACATGTAATGC...CCTGCCCCGAGCAACTGGGAAAGGCACAGGTGTGCCACAGTGCAGCAGGGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCAGTAACGTTGGGAAAATGATCCTGTCCGACTCTGCTGGCATCTGGGCTTGCTGGCATCTGGGCTaGCTTGGCCCTGGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: RSSNVGKMILSDSAGIWACWHLG*LGPGRQ Trigger: CTGCCTGCCAGGGCCAAGCCAGCCCAGATGCCAGCA...AGCCCAGATGCCAGCAGAGTCGGACAGGATCATTTTCCCAACGTTACTGCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR TCA 90 bp | CATGACCAGAAAGAAGACTCACTCCCAAGCCCCAGGCCTGGTAGAGGGTCTGTCTCACCCTTGAAGAAGTaGCCCTGTCTGGTGCCATGG | + |
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Preference number: 2 (lower is better) Translates to: HDQKEDSLPSPRPGRGSVSPLKK*PCLVPW Trigger: CCATGGCACCAGACAGGGTCACTTCTTCAAGGGTGA...GACAGACCCTCTACCAGGCCTGGGGCTTGGGAGTGAGTCTTCTTTCTGGTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR TCA 90 bp | CATGACCAGAAAGAAGACTCACTCCCAAGCCCCAGGCCTGGTAGAGGGTCTGTCCACGACCCAGCCACCTaGGAACACTCATCAGCATCA | + |
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Preference number: 2 (lower is better) Translates to: HDQKEDSLPSPRPGRGSVHDPAT*EHSSAS Trigger: TGATGCTGATGAGTGTTCTCAGGTGGCTGGGTCGTG...GACAGACCCTCTACCAGGCCTGGGGCTTGGGAGTGAGTCTTCTTTCTGGTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | AACGTTGGGAAAATGATCCTGTCCGACTCTGCTGGCATCTGGGCTGGCTTGGCCCGCCTCCCTCGACTGTaGAGGGGCCTAACTTTAACT | + |
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Preference number: 2 (lower is better) Translates to: NVGKMILSDSAGIWAGLARLPRL*RGLTLT Trigger: AGTTAAAGTTAGGCCCCTGCACAGTCGAGGGAGGCG...GGCCAAGCCAGCCCAGATGCCAGCAGAGTCGGACAGGATCATTTTCCCAACGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTGGCCCAGTAAACTGCAGAACCAAGGCACCTCAGGGCCAAGGAAAGGAGTGGGGAAGACAATGCTaGCAAGAGCCCAGAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: SPGPVNCRTKAPQGQGKEWGRQC*QEPRGN Trigger: GTTTCCTCTGGGCTCTTGCCAGCATTGTCTTCCCCA...CTCCTTTCCTTGGCCCTGAGGTGCCTTGGTTCTGCAGTTTACTGGGCCAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCAGTAACGTTGGGAAAATGATCCTGTCCGACTCTGCTGGCATCTGGGCTCCTGTCCGACTCTGCTaGCATCTGGGCTGGCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: RSSNVGKMILSDSAGIWAPVRLC*HLGWLG Trigger: GCCAAGCCAGCCCAGATGCCAGCAGAGTCGGACAGG...AGCCCAGATGCCAGCAGAGTCGGACAGGATCATTTTCCCAACGTTACTGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTACCAAGCAGCACCCAGCAGTCGGTGCCTCCCTCCAACACTCTTCAGAGCTATCGGTGCTGTGAGTaGGTTTGCAGTGCTCCACGA | + |
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Preference number: 2 (lower is better) Translates to: KLPSSTQQSVPPSNTLQSYRCCE*VCSAPR Trigger: TCGTGGAGCACTGCAAACTCACTCACAGCACCGATA...GCTCTGAAGAGTGTTGGAGGGAGGCACCGACTGCTGGGTGCTGCTTGGTAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
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| 3UTR-3UTR TCA 90 bp | AACGTTGGGAAAATGATCCTGTCCGACTCTGCTGGCATCTGGGCTGGCTTGGCCCGATTCATTGGTCAATaGTGGAGCGCTGCAACACCT | + |
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Preference number: 2 (lower is better) Translates to: NVGKMILSDSAGIWAGLARFIGQ*WSAATP Trigger: AGGTGTTGCAGCGCTCCATCATTGACCAATGAATCG...GGCCAAGCCAGCCCAGATGCCAGCAGAGTCGGACAGGATCATTTTCCCAACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTCCCTGCTGCACTGTGGCACACCTGTGCCTTTCCCAGTTGCTCGGGGCAGGGGTTTAAAACATACTTaGACAAGGAGGCAGCAATAC | + |
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Preference number: 2 (lower is better) Translates to: RSLLHCGTPVPFPVARGRGLKHT*TRRQQY Trigger: GTATTGCTGCCTCCTTGTGCAAGTATGTTTTAAACC...CCTGCCCCGAGCAACTGGGAAAGGCACAGGTGTGCCACAGTGCAGCAGGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTCAGATGGACCAGAGCCCCATGACCAGAAAGAAGACTCACTCCCAAGCCCCCTGGCTTTACCACTaGCTCCACAACAAAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QSQMDQSPMTRKKTHSQAPWLYH*LHNKRQ Trigger: CTGCCTTTTGTTGTGGAGGCAGTGGTAAAGCCAGGG...GGCTTGGGAGTGAGTCTTCTTTCTGGTCATGGGGCTCTGGTCCATCTGAGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCCCTGCTTTATTGTGCTATTCACAGCCCAGGGAAGGTCCTGGCTGGCTATGGGGAAGACAATGCTaGCAAGAGCCCAGAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: GVPALLCYSQPREGPGWLWGRQC*QEPRGN Trigger: GTTTCCTCTGGGCTCTTGCCAGCATTGTCTTCCCCA...TAGCCAGCCAGGACCTTCCCTGGGCTGTGAATAGCACAATAAAGCAGGGACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCAGAGGCACCACTGTGGAGGCGTGGTGCCACAAGTACAATGTTACATGCAGGGAACTGACTGGAGGTaGTCTTCCTTGTGCTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: RQRHHCGGVVPQVQCYMQGTDWR*SSLCSV Trigger: TACAGAGCACAAGGAAGAGCACCTCCAGTCAGTTCC...CTGCATGTAACATTGTACTTGTGGCACCACGCCTCCACAGTGGTGCCTCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | CATGACCAGAAAGAAGACTCACTCCCAAGCCCCAGGCCTGGTAGAGGGTCTGTCAAACAAGGTCACCAGTaGGGAAGACAATGCTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: HDQKEDSLPSPRPGRGSVKQGHQ*GRQCWQ Trigger: TTGCCAGCATTGTCTTCCCCACTGGTGACCTTGTTT...GACAGACCCTCTACCAGGCCTGGGGCTTGGGAGTGAGTCTTCTTTCTGGTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGACAAACAAGGTCACCAGTGGGGAAGACAATGCTGGCAAGAGCCCAGAGGAGAAGGGATGCATCCTTaGTGGTGGCCTTTACACCTT | + |
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Preference number: 2 (lower is better) Translates to: WDKQGHQWGRQCWQEPRGEGMHP*WWPLHL Trigger: AAGGTGTAAAGGCCACCACCAAGGATGCATCCCTTC...TCCTCTGGGCTCTTGCCAGCATTGTCTTCCCCACTGGTGACCTTGTTTGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
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| 3UTR-3UTR TCA 90 bp | CATCAGGCATTTAAGCCCTCAGGTGTACAGATGTGCAGGTGTAGGGAAACAGCATCACCCTTGAAGAAGTaGCCCTGTCTGGTGCCATGG | + |
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Preference number: 2 (lower is better) Translates to: HQAFKPSGVQMCRCRETASPLKK*PCLVPW Trigger: CCATGGCACCAGACAGGGTCACTTCTTCAAGGGTGA...TGCTGTTTCCCTACACCTGCACATCTGTACACCTGAGGGCTTAAATGCCTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGAGGCACCACTGTGGAGGCGTGGTGCCACAAGTACAATGTTACATGCAGCTCCCTACTTACACATaGACACACCCCATCTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: RQRHHCGGVVPQVQCYMQLPTYT*THPIFA Trigger: AGCAAAGATGGGGTGTGTTCATGTGTAAGTAGGGAG...CTGCATGTAACATTGTACTTGTGGCACCACGCCTCCACAGTGGTGCCTCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTGTAGGGAAACAGCAGTAACCAAAACTTCCCCCATCAGACTGCGATGTCACCAGTGGGGAAGACAATaGTGGCAAGAGCCCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: RCRETAVTKTSPIRLRCHQWGRQ*WQEPRG Trigger: TCCTCTGGGCTCTTGCCAGCATTGTCTTCCCCACTG...GTGACATCGCAGTCTGATGGGGGAAGTTTTGGTTACTGCTGTTTCCCTACACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCCCTGCTTTATTGTGCTATTCACAGCCCAGGGAAGGTCCTGGCTGGCTAAAACAAGGTCACCAGTaGGGAAGACAATGCTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: GVPALLCYSQPREGPGWLKQGHQ*GRQCWQ Trigger: TTGCCAGCATTGTCTTCCCCACTGGTGACCTTGTTT...TAGCCAGCCAGGACCTTCCCTGGGCTGTGAATAGCACAATAAAGCAGGGACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | CATCAGGCATTTAAGCCCTCAGGTGTACAGATGTGCAGGTGTAGGGAAACAGCAAGGGAAGGTCCTGGCTaGCTAGAAGGACCTGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: HQAFKPSGVQMCRCRETAREGPG*LEGPER Trigger: TCTCTCAGGTCCTTCTAGCCAGCCAGGACCTTCCCT...TGCTGTTTCCCTACACCTGCACATCTGTACACCTGAGGGCTTAAATGCCTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGAATGTCAGCATATACTCAATAAGAGGGGCACACGACCCAGCCACCTGAGAAGGGAAGGTCCTGGCTaGCTAGAAGGACCTGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QECQHILNKRGTRPSHLRREGPG*LEGPER Trigger: TCTCTCAGGTCCTTCTAGCCAGCCAGGACCTTCCCT...TCTCAGGTGGCTGGGTCGTGTGCCCCTCTTATTGAGTATATGCTGACATTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCAGTAACGTTGGGAAAATGATCCTGTCCGACTCTGCTGGCATCTGGGCTTCCTGTGGAACTGACTaGAGGTGCTCTTCCTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: RSSNVGKMILSDSAGIWASCGTD*RCSSLC Trigger: GCACAAGGAAGAGCACCTCCAGTCAGTTCCACAGGA...AGCCCAGATGCCAGCAGAGTCGGACAGGATCATTTTCCCAACGTTACTGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTACCACTGCCTCCACAACAAAAGGCAGGGTTTAAAACATACTTGCACAAGGGACTCTGCTGGCATCTaGGCTGGCTTGGCCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LYHCLHNKRQGLKHTCTRDSAGI*AGLALA Trigger: TGCCAGGGCCAAGCCAGCCCAGATGCCAGCAGAGTC...CCTTGTGCAAGTATGTTTTAAACCCTGCCTTTTGTTGTGGAGGCAGTGGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGAAAGTCATATTAGAAACAGCGAGTGTGATGAAGGACAAGAGGTCCCTGGACTCTGCTGGCATCTaGGCTGGCTTGGCCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: FWKVILETASVMKDKRSLDSAGI*AGLALA Trigger: TGCCAGGGCCAAGCCAGCCCAGATGCCAGCAGAGTC...CAGGGACCTCTTGTCCTTCATCACACTCGCTGTTTCTAATATGACTTTCCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTGTAGGGAAACAGCAGTAACCAAAACTTCCCCCATCAGACTGCGATGTCACAAAGCAGGCAGTAGCTaGGGTGTGGTGAAAGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: RCRETAVTKTSPIRLRCHKAGSS*GVVKAD Trigger: GTCTGCTTTCACCACACCTCAGCTACTGCCTGCTTT...GTGACATCGCAGTCTGATGGGGGAAGTTTTGGTTACTGCTGTTTCCCTACACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCATTTAAGCCCTCAGGTGTACAGATGTGCAGGTGTAGGGAAACAGCAGTAAAAGCAGGCAGTAGCTaGGGTGTGGTGAAAGCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: QAFKPSGVQMCRCRETAVKAGSS*GVVKAD Trigger: GTCTGCTTTCACCACACCTCAGCTACTGCCTGCTTT...TACTGCTGTTTCCCTACACCTGCACATCTGTACACCTGAGGGCTTAAATGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCGGTGCCTCCCTCCAACACTCTTCAGAGCAAGAATGTCAGCATATACTCAACACGACCCAGCCACCTaGGAACACTCATCAGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: SRCLPPTLFRARMSAYTQHDPAT*EHSSAS Trigger: TGATGCTGATGAGTGTTCTCAGGTGGCTGGGTCGTG...TTGAGTATATGCTGACATTCTTGCTCTGAAGAGTGTTGGAGGGAGGCACCGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCTCATCAAGTTACCAAGCAGCACCCAGCAGTCGGTGCCTCCCTCCAACACTCAAGGAAAGGAGTCCCTaGTTTATTGTGCTATTCACA | + |
|
Preference number: 2 (lower is better) Translates to: GSSSYQAAPSSRCLPPTLKERSP*FIVLFT Trigger: TGTGAATAGCACAATAAAGCAGGGACTCCTTTCCTT...GAGTGTTGGAGGGAGGCACCGACTGCTGGGTGCTGCTTGGTAACTTGATGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAATGTCAGCATATACTCAATAAGAGGGGCACACGACCCAGCCACCTGAGAGGGATGCATCCTTGGTaGTGGCCTTTACACCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QECQHILNKRGTRPSHLRGMHPW*WPLHLP Trigger: TGGAAGGTGTAAAGGCCACCACCAAGGATGCATCCC...TCTCAGGTGGCTGGGTCGTGTGCCCCTCTTATTGAGTATATGCTGACATTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAGTCGGTGCCTCCCTCCAACACTCTTCAGAGCAAGAATGTCAGCATATACTCGCATTACATGTGAGGTaGAAGAGTCAAGGGCTCACA | + |
|
Preference number: 2 (lower is better) Translates to: AVGASLQHSSEQECQHILALHVR*KSQGLT Trigger: TGTGAGCCCTTGACTCTTGCACCTCACATGTAATGC...GAGTATATGCTGACATTCTTGCTCTGAAGAGTGTTGGAGGGAGGCACCGACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGGAAAGTCATATTAGAAACAGCGAGTGTGATGAAGGACAAGAGGTCCCTGCTTCCCCCATCAGACTaGGATGTCACCCAGGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FWKVILETASVMKDKRSLLPPSD*DVTQEE Trigger: CTCCTCCTGGGTGACATCGCAGTCTGATGGGGGAAG...CAGGGACCTCTTGTCCTTCATCACACTCGCTGTTTCTAATATGACTTTCCAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCTAAAAAGGCACCATCAGGCATTTAAGCCCTCAGGTGTACAGATGTGCAGGCCCTGTCTGGTGCCATaGCTCAATTCCAGATCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ILKRHHQAFKPSGVQMCRPCLVP*LNSRSA Trigger: TGCAGATCTGGAATTGAGCCATGGCACCAGACAGGG...CCTGCACATCTGTACACCTGAGGGCTTAAATGCCTGATGGTGCCTTTTTAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTACAGATGTGCAGGTGTAGGGAAACAGCAGTAACCAAAACTTCCCCCATCAGAAGTGACCCTGTCTaGTGCCATGGCTCAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: GVQMCRCRETAVTKTSPIRSDPV*CHGSIP Trigger: TGGAATTGAGCCATGGCACCAGACAGGGTCACTTCT...GATGGGGGAAGTTTTGGTTACTGCTGTTTCCCTACACCTGCACATCTGTACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR CCA 90 bp | CATCAGGCATTTAAGCCCTCAGGTGTACAGATGTGCAGGTGTAGGGAAACAGCAAGAAGTGACCCTGTCTaGTGCCATGGCTCAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: HQAFKPSGVQMCRCRETARSDPV*CHGSIP Trigger: TGGAATTGAGCCATGGCACCAGACAGGGTCACTTCT...TGCTGTTTCCCTACACCTGCACATCTGTACACCTGAGGGCTTAAATGCCTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTCGGTGCCTCCCTCCAACACTCTTCAGAGCAAGAATGTCAGCATATACTCTGTAGGAGAAGAAGCTaGGCTCTTCTTAAAGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: AVGASLQHSSEQECQHILCRRRS*ALLKAG Trigger: GCCTGCTTTAAGAAGAGCCCAGCTTCTTCTCCTACA...GAGTATATGCTGACATTCTTGCTCTGAAGAGTGTTGGAGGGAGGCACCGACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTACCACTGCCTCCACAACAAAAGGCAGGGTTTAAAACATACTTGCACAAGGTCACCCTTGAAGAAGTaGCCCTGTCTGGTGCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: LYHCLHNKRQGLKHTCTRSPLKK*PCLVPW Trigger: CCATGGCACCAGACAGGGTCACTTCTTCAAGGGTGA...CCTTGTGCAAGTATGTTTTAAACCCTGCCTTTTGTTGTGGAGGCAGTGGTAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR TCA 90 bp | CATAACCACACTTTCTGGAAAGTCATATTAGAAACAGCGAGTGTGATGAAGGACGGGCCCCATCACCCTTaGAGAAGTGACCCTGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HNHTFWKVILETASVMKDGPHHP*RSDPVW Trigger: CCAGACAGGGTCACTTCTTCAAGGGTGATGGGGCCC...GTCCTTCATCACACTCGCTGTTTCTAATATGACTTTCCAGAAAGTGTGGTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACAACAAAAGGCAGGGTTTAAAACATACTTGCACAAGGAGGCAGCAATACTGCAGTGGGGAAGACAATaGTGGCAAGAGCCCAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PQQKAGFKTYLHKEAAILQWGRQ*WQEPRG Trigger: TCCTCTGGGCTCTTGCCAGCATTGTCTTCCCCACTG...CAGTATTGCTGCCTCCTTGTGCAAGTATGTTTTAAACCCTGCCTTTTGTTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGTCTCAGATGGACCAGAGCCCCATGACCAGAAAGAAGACTCACTCCCAAGCCAAGGAAAGGAGTCCCTaGTTTATTGTGCTATTCACA | + |
|
Preference number: 2 (lower is better) Translates to: QSQMDQSPMTRKKTHSQAKERSP*FIVLFT Trigger: TGTGAATAGCACAATAAAGCAGGGACTCCTTTCCTT...GGCTTGGGAGTGAGTCTTCTTTCTGGTCATGGGGCTCTGGTCCATCTGAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCATCAGCATCAAAGTAAACCAAAAAGCCACACACCCTACACCTTCTCCCTACGCCTCCCTCGACTGTaGAGGGGCCTAACTTTAACT | + |
|
Preference number: 2 (lower is better) Translates to: THQHQSKPKSHTPYTFSLRLPRL*RGLTLT Trigger: AGTTAAAGTTAGGCCCCTGCACAGTCGAGGGAGGCG...TAGGGAGAAGGTGTAGGGTGTGTGGCTTTTTGGTTTACTTTGATGCTGATGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCATTTAAGCCCTCAGGTGTACAGATGTGCAGGTGTAGGGAAACAGCAGTAAAACAAGGTCACCAGTaGGGAAGACAATGCTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: QAFKPSGVQMCRCRETAVKQGHQ*GRQCWQ Trigger: TTGCCAGCATTGTCTTCCCCACTGGTGACCTTGTTT...TACTGCTGTTTCCCTACACCTGCACATCTGTACACCTGAGGGCTTAAATGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCGGTGCCTCCCTCCAACACTCTTCAGAGCAAGAATGTCAGCATATACTCAACTCCCTACTTACACATaGACACACCCCATCTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SRCLPPTLFRARMSAYTQLPTYT*THPIFA Trigger: AGCAAAGATGGGGTGTGTTCATGTGTAAGTAGGGAG...TTGAGTATATGCTGACATTCTTGCTCTGAAGAGTGTTGGAGGGAGGCACCGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTCATCAGCATCAAAGTAAACCAAAAAGCCACACACCCTACACCTTCTCCCTACCCTGGCTTTACCACTaGCTCCACAACAAAAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: THQHQSKPKSHTPYTFSLPWLYH*LHNKRQ Trigger: CTGCCTTTTGTTGTGGAGGCAGTGGTAAAGCCAGGG...TAGGGAGAAGGTGTAGGGTGTGTGGCTTTTTGGTTTACTTTGATGCTGATGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCGGTGCCTCCCTCCAACACTCTTCAGAGCAAGAATGTCAGCATATACTCAAAGCTGTTATAGCTGCTaGTCAAGAAAGCCTCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SRCLPPTLFRARMSAYTQSCYSC*SRKPQQ Trigger: CTGCTGAGGCTTTCTTGAGCAGCAGCTATAACAGCT...TTGAGTATATGCTGACATTCTTGCTCTGAAGAGTGTTGGAGGGAGGCACCGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTACCACTGCCTCCACAACAAAAGGCAGGGTTTAAAACATACTTGCACAAGGCCCTGTCTGGTGCCATaGCTCAATTCCAGATCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LYHCLHNKRQGLKHTCTRPCLVP*LNSRSA Trigger: TGCAGATCTGGAATTGAGCCATGGCACCAGACAGGG...CCTTGTGCAAGTATGTTTTAAACCCTGCCTTTTGTTGTGGAGGCAGTGGTAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR CCA 90 bp | CCACAACAAAAGGCAGGGTTTAAAACATACTTGCACAAGGAGGCAGCAATACTGTGGGGAAGACAATGCTaGCAAGAGCCCAGAGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PQQKAGFKTYLHKEAAILWGRQC*QEPRGN Trigger: GTTTCCTCTGGGCTCTTGCCAGCATTGTCTTCCCCA...CAGTATTGCTGCCTCCTTGTGCAAGTATGTTTTAAACCCTGCCTTTTGTTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTGTACAGATGTGCAGGTGTAGGGAAACAGCAGTAACCAAAACTTCCCCCATCGCTCAATTCCAGATCTaGATTACATGTGAGGTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GVQMCRCRETAVTKTSPIAQFQI*ITCEVQ Trigger: TTGCACCTCACATGTAATGCAGATCTGGAATTGAGC...GATGGGGGAAGTTTTGGTTACTGCTGTTTCCCTACACCTGCACATCTGTACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | CATCAGGCATTTAAGCCCTCAGGTGTACAGATGTGCAGGTGTAGGGAAACAGCAAACACACCCCATCTTTaGTACCCAACATTTCCACTA | + |
|
Preference number: 2 (lower is better) Translates to: HQAFKPSGVQMCRCRETANTPHL*YPTFPL Trigger: TAGTGGAAATGTTGGGTAGCAAAGATGGGGTGTGTT...TGCTGTTTCCCTACACCTGCACATCTGTACACCTGAGGGCTTAAATGCCTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTACCACTGCCTCCACAACAAAAGGCAGGGTTTAAAACATACTTGCACAAGGGGAACTGACTGGAGGTaGTCTTCCTTGTGCTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: LYHCLHNKRQGLKHTCTRGTDWR*SSLCSV Trigger: TACAGAGCACAAGGAAGAGCACCTCCAGTCAGTTCC...CCTTGTGCAAGTATGTTTTAAACCCTGCCTTTTGTTGTGGAGGCAGTGGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCATCAGCATCAAAGTAAACCAAAAAGCCACACACCCTACACCTTCTCCCTAAGAAGTGACCCTGTCTaGTGCCATGGCTCAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: THQHQSKPKSHTPYTFSLRSDPV*CHGSIP Trigger: TGGAATTGAGCCATGGCACCAGACAGGGTCACTTCT...TAGGGAGAAGGTGTAGGGTGTGTGGCTTTTTGGTTTACTTTGATGCTGATGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGAAAGTCATATTAGAAACAGCGAGTGTGATGAAGGACAAGAGGTCCCTGACCACTGTGGAGGCGTaGTGCCACAAGTACAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: FWKVILETASVMKDKRSLTTVEA*CHKYNV Trigger: AACATTGTACTTGTGGCACCACGCCTCCACAGTGGT...CAGGGACCTCTTGTCCTTCATCACACTCGCTGTTTCTAATATGACTTTCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGAAAGTCATATTAGAAACAGCGAGTGTGATGAAGGACAAGAGGTCCCTGGCATTACATGTGAGGTaGAAGAGTCAAGGGCTCACA | + |
|
Preference number: 2 (lower is better) Translates to: FWKVILETASVMKDKRSLALHVR*KSQGLT Trigger: TGTGAGCCCTTGACTCTTGCACCTCACATGTAATGC...CAGGGACCTCTTGTCCTTCATCACACTCGCTGTTTCTAATATGACTTTCCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACAACAAAAGGCAGGGTTTAAAACATACTTGCACAAGGAGGCAGCAATACTGTCAGGTGTACAGATGTaGAGGTGTAGGGAAACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PQQKAGFKTYLHKEAAILSGVQM*RCRETA Trigger: TGCTGTTTCCCTACACCTGCACATCTGTACACCTGA...CAGTATTGCTGCCTCCTTGTGCAAGTATGTTTTAAACCCTGCCTTTTGTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTTAAAACATACTTGCACAAGGAGGCAGCAATACTGCTCAGGCTCATCAAGTAGGAGGCAGCAATACTaGTCAGGCTCATCAAGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: GLKHTCTRRQQYCSGSSSRRQQY*SGSSSY Trigger: GTAACTTGATGAGCCTGAGCAGTATTGCTGCCTCCT...ACTTGATGAGCCTGAGCAGTATTGCTGCCTCCTTGTGCAAGTATGTTTTAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCATCAGCATCAAAGTAAACCAAAAAGCCACACACCCTACACCTTCTCCCTATCCAGCTGTTATAGCTaGTGCTCAAGAAAGCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: THQHQSKPKSHTPYTFSLSSCYS*CSRKPQ Trigger: CTGAGGCTTTCTTGAGCAGCAGCTATAACAGCTGGA...TAGGGAGAAGGTGTAGGGTGTGTGGCTTTTTGGTTTACTTTGATGCTGATGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTACCACTGCCTCCACAACAAAAGGCAGGGTTTAAAACATACTTGCACAAGGTGTAGGAGAAGAAGCTaGGCTCTTCTTAAAGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LYHCLHNKRQGLKHTCTRCRRRS*ALLKAG Trigger: GCCTGCTTTAAGAAGAGCCCAGCTTCTTCTCCTACA...CCTTGTGCAAGTATGTTTTAAACCCTGCCTTTTGTTGTGGAGGCAGTGGTAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCCTAAAAAGGCACCATCAGGCATTTAAGCCCTCAGGTGTACAGATGTGCAGGAAGGAAAGGAGTCCCTaGTTTATTGTGCTATTCACA | + |
|
Preference number: 2 (lower is better) Translates to: ILKRHHQAFKPSGVQMCRKERSP*FIVLFT Trigger: TGTGAATAGCACAATAAAGCAGGGACTCCTTTCCTT...CCTGCACATCTGTACACCTGAGGGCTTAAATGCCTGATGGTGCCTTTTTAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTTAAAACATACTTGCACAAGGAGGCAGCAATACTGCTCAGGCTCATCAAGTTCAATGATGGAGCGCTaGAACACCTGGTTTATCATG | + |
|
Preference number: 2 (lower is better) Translates to: GLKHTCTRRQQYCSGSSSSMMER*NTWFIM Trigger: CATGATAAACCAGGTGTTGCAGCGCTCCATCATTGA...ACTTGATGAGCCTGAGCAGTATTGCTGCCTCCTTGTGCAAGTATGTTTTAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACAACAAAAGGCAGGGTTTAAAACATACTTGCACAAGGAGGCAGCAATACTGGCTCAATTCCAGATCTaGATTACATGTGAGGTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PQQKAGFKTYLHKEAAILAQFQI*ITCEVQ Trigger: TTGCACCTCACATGTAATGCAGATCTGGAATTGAGC...CAGTATTGCTGCCTCCTTGTGCAAGTATGTTTTAAACCCTGCCTTTTGTTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR GCA 90 bp | CATAACCACACTTTCTGGAAAGTCATATTAGAAACAGCGAGTGTGATGAAGGACAGGAGGCAGCAATACTaGTCAGGCTCATCAAGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: HNHTFWKVILETASVMKDRRQQY*SGSSSY Trigger: GTAACTTGATGAGCCTGAGCAGTATTGCTGCCTCCT...GTCCTTCATCACACTCGCTGTTTCTAATATGACTTTCCAGAAAGTGTGGTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR GCA 90 bp | CATAACCACACTTTCTGGAAAGTCATATTAGAAACAGCGAGTGTGATGAAGGACAGCTGTTATAGCTGCTaGTCAAGAAAGCCTCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HNHTFWKVILETASVMKDSCYSC*SRKPQQ Trigger: CTGCTGAGGCTTTCTTGAGCAGCAGCTATAACAGCT...GTCCTTCATCACACTCGCTGTTTCTAATATGACTTTCCAGAAAGTGTGGTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGCAGTAACGTTGGGAAAATGATCCTGTCCGACTCTGCTGGCATCTGGGCTGGCATCTGGGCTGGCTaGGCCCTGGCAGGCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RSSNVGKMILSDSAGIWAGIWAG*ALAGRG Trigger: GCCTCTGCCTGCCAGGGCCAAGCCAGCCCAGATGCC...AGCCCAGATGCCAGCAGAGTCGGACAGGATCATTTTCCCAACGTTACTGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR GCA 72 bp | AGGACAAGAGGTCCCTGCTGCACTGTGGCACACCTGTaGCTTTCCCAGTTGCTCGGGGCAGGTCTTGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RTRGPCCTVAHL*LSQLLGAGLVE Trigger: TTCAACAAGACCTGCCCCGAGCAACTGGGAAAGGCACAGGTGTGCCACAGTGCAGCAGGGACCTCTTGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCATCAAGTTACCAAGCAGCACCCAGCAGTCGGTGCCTCCCTCCAACACTCGGAGTCCCTGCTTTATaGTGCTATTCACAGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSSSYQAAPSSRCLPPTLGVPAL*CYSQPR Trigger: CCTGGGCTGTGAATAGCACAATAAAGCAGGGACTCC...GAGTGTTGGAGGGAGGCACCGACTGCTGGGTGCTGCTTGGTAACTTGATGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | AACAGGGCTCTCTCTGCCCTAGGGCCCCATCACCCTTaGAGAAGTGACCCTGTCTGGTGCCATGGCTCAATT | + |
|
Preference number: 3 (lower is better) Translates to: NRALSALGPHHP*RSDPVWCHGSI Trigger: AATTGAGCCATGGCACCAGACAGGGTCACTTCTTCAAGGGTGATGGGGCCCTAGGGCAGAGAGAGCCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | AGCCCCAGGCCTGGTAGAGGGTCTGTCCTGTGGAACTaGCTGGAGGTGCTCTTCCTTGTGCTCTGTAACATG | + |
|
Preference number: 3 (lower is better) Translates to: SPRPGRGSVLWN*LEVLFLVLCNM Trigger: CATGTTACAGAGCACAAGGAAGAGCACCTCCAGTCAGTTCCACAGGACAGACCCTCTACCAGGCCTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTACCAAGCAGCACCCAGCAGTCGGTGCCTCCCTCCAACACTCTTCAGAGCGGAGTCCCTGCTTTATaGTGCTATTCACAGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KLPSSTQQSVPPSNTLQSGVPAL*CYSQPR Trigger: CCTGGGCTGTGAATAGCACAATAAAGCAGGGACTCC...GCTCTGAAGAGTGTTGGAGGGAGGCACCGACTGCTGGGTGCTGCTTGGTAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | CCTGTGCCTTTCCCAGTTGCTCGGGGCAGGTCTTGTTaGACCTCCCTCCACACATCTCCTGAGCAAACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PVPFPVARGRSC*TSLHTSPEQTF Trigger: AAAGGTTTGCTCAGGAGATGTGTGGAGGGAGGTTCAACAAGACCTGCCCCGAGCAACTGGGAAAGGCACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | AATGTTACATGCAGTCTCAGATGGACCAGAGCCCCATaGCCAGAAAGAAGACTCACTCCCAAGCCCCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: NVTCSLRWTRAP*PERRLTPKPQA Trigger: GGCCTGGGGCTTGGGAGTGAGTCTTCTTTCTGGTCATGGGGCTCTGGTCCATCTGAGACTGCATGTAACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR GCA 72 bp | GGCTCATCAAGTTACCAAGCAGCACCCAGCAGTCGGTaGCTCCCTCCAACACTCTTCAGAGCAAGAATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GSSSYQAAPSSR*LPPTLFRARMS Trigger: TGACATTCTTGCTCTGAAGAGTGTTGGAGGGAGGCACCGACTGCTGGGTGCTGCTTGGTAACTTGATGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | GGGCTCTTCTTAAAGCAGGCAGTAGCTGAGGTGTGGTaGAAGCAGACCATGGGACAAACAAGGTCACCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GLFLKQAVAEVW*KQTMGQTRSPV Trigger: CACTGGTGACCTTGTTTGTCCCATGGTCTGCTTTCACCACACCTCAGCTACTGCCTGCTTTAAGAAGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | CGACTGTGCAGGGGCCTAACTTTAACTTCCCAGGTATaGCCCTGGCTTTACCACTGCCTCCACAACAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RLCRGLTLTSQV*PWLYHCLHNKR Trigger: CCTTTTGTTGTGGAGGCAGTGGTAAAGCCAGGGTCATACCTGGGAAGTTAAAGTTAGGCCCCTGCACAGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | AGAGGGTACAGTGAAGAAGCAGTAACGTTGGGAAAATaGTCCTGTCCGACTCTGCTGGCATCTGGGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RGYSEEAVTLGK*SCPTLLASGLA Trigger: AGCCAGCCCAGATGCCAGCAGAGTCGGACAGGATCATTTTCCCAACGTTACTGCTTCTTCACTGTACCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | GGGCAGGTCTTGTTGAACCTCCCTCCACACATCTCCTaGGCAAACCTTTCCAGAGGGTACAGTGAAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GQVLLNLPPHIS*ANLSRGYSEEA Trigger: TGCTTCTTCACTGTACCCTCTGGAAAGGTTTGCTCAGGAGATGTGTGGAGGGAGGTTCAACAAGACCTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR GCA 72 bp | GTGACCCTGTCTGGTGCCATGGCTCAATTCCAGATCTaGATTACATGTGAGGTGCAAGAGTCAAGGGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VTLSGAMAQFQI*ITCEVQESRAH Trigger: GTGAGCCCTTGACTCTTGCACCTCACATGTAATGCAGATCTGGAATTGAGCCATGGCACCAGACAGGGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | AGGGAAGGTCCTGGCTGGCTAGAAGGACCTGAGAGATaGACACTGGGCAACAGGATGAATGCGATTAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: REGPGWLEGPER*TLGNRMNAIKI Trigger: GATCTTAATCGCATTCATCCTGTTGCCCAGTGTTCATCTCTCAGGTCCTTCTAGCCAGCCAGGACCTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | TGGGACAAACCACAGACTTGGTATCGGTGCTGTGAGTaGGTTTGCAGTGCTCCACGAGTCCTTCCTGATCAA | + |
|
Preference number: 3 (lower is better) Translates to: WDKPQTWYRCCE*VCSAPRVLPDQ Trigger: TTGATCAGGAAGGACTCGTGGAGCACTGCAAACTCACTCACAGCACCGATACCAAGTCTGTGGTTTGTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | GTGAGGTGGACAGCCAGGACCCGATTCATTGGTCAATaGTGGAGCGCTGCAACACCTGGTTTATCATGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VRWTARTRFIGQ*WSAATPGLSCH Trigger: ATGACATGATAAACCAGGTGTTGCAGCGCTCCATCATTGACCAATGAATCGGGTCCTGGCTGTCCACCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
||
| 3UTR GCA 72 bp | GGTGTATCGGTTTGGGATGTTTCTCGGCTGAAGGGATaGATCCTTGGTGGTGGCCTTTACACCTTCCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: GVSVWDVSRLKG*ILGGGLYTFHD Trigger: ATCATGGAAGGTGTAAAGGCCACCACCAAGGATGCATCCCTTCAGCCGAGAAACATCCCAAACCGATACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
||
| 3UTR CCA 72 bp | CTCGGGACAGTAAGGACAAGGAAAGGTGTATCGGTTTaGGATGTTTCTCGGCTGAAGGGATGCATCCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LGTVRTRKGVSV*DVSRLKGCILG Trigger: ACCAAGGATGCATCCCTTCAGCCGAGAAACATCCCAAACCGATACACCTTTCCTTGTCCTTACTGTCCCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGGAAAGTCATATTAGAAACAGCGAGTGTGATGAAGGACAAGAGGTCCCTGTCGGGGCAGGTCTTGTaGAACCTCCCTCCACACATC | + |
|
Preference number: 3 (lower is better) Translates to: FWKVILETASVMKDKRSLSGQVL*NLPPHI Trigger: GATGTGTGGAGGGAGGTTCAACAAGACCTGCCCCGA...CAGGGACCTCTTGTCCTTCATCACACTCGCTGTTTCTAATATGACTTTCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | TGGTGCCATGGCTCAATTCCAGATCTGCATTACATGTaGGGTGCAAGAGTCAAGGGCTCACACCTAATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: WCHGSIPDLHYM*GARVKGSHLMH Trigger: GTGCATTAGGTGTGAGCCCTTGACTCTTGCACCTCACATGTAATGCAGATCTGGAATTGAGCCATGGCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR TCA 72 bp | AGAAGAAGCTGGGCTCTTCTTAAAGCAGGCAGTAGCTaGGGTGTGGTGAAAGCAGACCATGGGACAAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: RRSWALLKAGSS*GVVKADHGTNK Trigger: CTTGTTTGTCCCATGGTCTGCTTTCACCACACCTCAGCTACTGCCTGCTTTAAGAAGAGCCCAGCTTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR GCA 72 bp | GGTTTAAAACATACTTGCACAAGGAGGCAGCAATACTaGTCAGGCTCATCAAGTTACCAAGCAGCACCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GLKHTCTRRQQY*SGSSSYQAAPS Trigger: GCTGGGTGCTGCTTGGTAACTTGATGAGCCTGAGCAGTATTGCTGCCTCCTTGTGCAAGTATGTTTTAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR GCA 72 bp | AGCCAGGACCCGATTCATTGGTCAATGATGGAGCGCTaGAACACCTGGTTTATCATGTCATCTTCATCAACA | + |
|
Preference number: 3 (lower is better) Translates to: SQDPIHWSMMER*NTWFIMSSSST Trigger: TGTTGATGAAGATGACATGATAAACCAGGTGTTGCAGCGCTCCATCATTGACCAATGAATCGGGTCCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
||
| 3UTR GCA 72 bp | CCTTCTCCCTACTTACACATGAACACACCCCATCTTTaGTACCCAACATTTCCACTACAATTCTATGGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: PSPYLHMNTPHL*YPTFPLQFYGD Trigger: ATCACCATAGAATTGTAGTGGAAATGTTGGGTAGCAAAGATGGGGTGTGTTCATGTGTAAGTAGGGAGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| 3UTR CCA 72 bp | TTCACTTTCTATAAGACAGAACATAACCACACTTTCTaGAAAGTCATATTAGAAACAGCGAGTGTGATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FTFYKTEHNHTF*KVILETASVMK Trigger: CTTCATCACACTCGCTGTTTCTAATATGACTTTCCAGAAAGTGTGGTTATGTTCTGTCTTATAGAAAGTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGAGCCCAGAGGAAACAGGGCTCTCTCTGCCCTAGGGCCCCATCACCCTTGTCCGCAGGGCACCTaGACCGGCTTCTCGAATACT | + |
|
Preference number: 4 (lower is better) Translates to: WQEPRGNRALSALGPHHPCPQGT*TGFSNT Trigger: AGTATTCGAGAAGCCGGTGCAGGTGCCCTGCGGACA...AGGGTGATGGGGCCCTAGGGCAGAGAGAGCCCTGTTTCCTCTGGGCTCTTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTACCAAGCAGCACCCAGCAGTCGGTGCCTCCCTCCAACACTCTTCAGAGCTGTCCGCAGGGCACCTaGACCGGCTTCTCGAATACT | + |
|
Preference number: 4 (lower is better) Translates to: KLPSSTQQSVPPSNTLQSCPQGT*TGFSNT Trigger: AGTATTCGAGAAGCCGGTGCAGGTGCCCTGCGGACA...GCTCTGAAGAGTGTTGGAGGGAGGCACCGACTGCTGGGTGCTGCTTGGTAACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAGACAATGCTGGCAAGAGCCCAGAGGAAACAGGGCTCTCTCTGCCCTAGGGGCAAGAAGTCTCTATaGTCTCGATCTGCCGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GKTMLARAQRKQGSLCPRGKKSL*SRSAAR Trigger: TCGAGCGGCAGATCGAGAGCATAGAGACTTCTTGCC...CCTAGGGCAGAGAGAGCCCTGTTTCCTCTGGGCTCTTGCCAGCATTGTCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCCCTGCTGCACTGTGGCACACCTGTGCCTTTCCCAGTTGCTCGGGGCAGGTCAATGATGGAGCGCTaGAACACCTGGTTTATCATG | + |
|
Preference number: 4 (lower is better) Translates to: RSLLHCGTPVPFPVARGRSMMER*NTWFIM Trigger: CATGATAAACCAGGTGTTGCAGCGCTCCATCATTGA...CCTGCCCCGAGCAACTGGGAAAGGCACAGGTGTGCCACAGTGCAGCAGGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCATCAAGTTACCAAGCAGCACCCAGCAGTCGGTGCCTCCCTCCAACACTCGCATCGAGGCACAGATaGGACAAACCACAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSSYQAAPSSRCLPPTLASRHR*DKPQTW Trigger: CCAAGTCTGTGGTTTGTCCCATCTGTGCCTCGATGC...GAGTGTTGGAGGGAGGCACCGACTGCTGGGTGCTGCTTGGTAACTTGATGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGACAATGCTGGCAAGAGCCCAGAGGAAACAGGGCTCTCTCTGCCCTAGGGCATCGAGGCACAGATaGGACAAACCACAGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKTMLARAQRKQGSLCPRASRHR*DKPQTW Trigger: CCAAGTCTGTGGTTTGTCCCATCTGTGCCTCGATGC...CCTAGGGCAGAGAGAGCCCTGTTTCCTCTGGGCTCTTGCCAGCATTGTCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAATGTCAGCATATACTCAATAAGAGGGGCACACGACCCAGCCACCTGAGATGGCACTGCGGTAGCTaGGGTCTCCCCAGGGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: QECQHILNKRGTRPSHLRWHCGS*GLPRAS Trigger: CGATGCCCTGGGGAGACCCCAGCTACCGCAGTGCCA...TCTCAGGTGGCTGGGTCGTGTGCCCCTCTTATTGAGTATATGCTGACATTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCCCAGTAAACTGCAGAACCAAGGCACCTCAGGGCCAAGGAAAGGAGTCACATTCCTGCAGGCATaGAGAGCAAAAGACGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PWPSKLQNQGTSGPRKGVTFLQA*RAKDVS Trigger: GGACACGTCTTTTGCTCTGCATGCCTGCAGGAATGT...GACTCCTTTCCTTGGCCCTGAGGTGCCTTGGTTCTGCAGTTTACTGGGCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCATCAAGTTACCAAGCAGCACCCAGCAGTCGGTGCCTCCCTCCAACACTCGGCTTCAGACATTCCTaGAGGCATGCAGAGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSSYQAAPSSRCLPPTLGFRHS*RHAEQK Trigger: CTTTTGCTCTGCATGCCTGCAGGAATGTCTGAAGCC...GAGTGTTGGAGGGAGGCACCGACTGCTGGGTGCTGCTTGGTAACTTGATGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGTAGGGAAACAGCAGTAACCAAAACTTCCCCCATCAGACTGCGATGTCACCAGGTGCCAGAGCGCTaGGACACACCCCACAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RCRETAVTKTSPIRLRCHQVPER*DTPHRQ Trigger: CTGTCTGTGGGGTGTGTCGCAGCGCTCTGGCACCTG...GTGACATCGCAGTCTGATGGGGGAAGTTTTGGTTACTGCTGTTTCCCTACACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR GCA 90 bp | ATCCTAAAAAGGCACCATCAGGCATTTAAGCCCTCAGGTGTACAGATGTGCAGGAGCTCGGACGCCAGGTaGCAGAGCGCTGCGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: ILKRHHQAFKPSGVQMCRSSDAR*QSAATH Trigger: GTGTGTCGCAGCGCTCTGGCACCTGGCGTCCGAGCT...CCTGCACATCTGTACACCTGAGGGCTTAAATGCCTGATGGTGCCTTTTTAGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTACCAAGCAGCACCCAGCAGTCGGTGCCTCCCTCCAACACTCTTCAGAGCGGGATGCATCCTTGGTaGTGGCCTTTACACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLPSSTQQSVPPSNTLQSGMHPW*WPLHLP Trigger: TGGAAGGTGTAAAGGCCACCACCAAGGATGCATCCC...GCTCTGAAGAGTGTTGGAGGGAGGCACCGACTGCTGGGTGCTGCTTGGTAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR CCA 90 bp | CATGACCAGAAAGAAGACTCACTCCCAAGCCCCAGGCCTGGTAGAGGGTCTGTCGGGATGCATCCTTGGTaGTGGCCTTTACACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HDQKEDSLPSPRPGRGSVGMHPW*WPLHLP Trigger: TGGAAGGTGTAAAGGCCACCACCAAGGATGCATCCC...GACAGACCCTCTACCAGGCCTGGGGCTTGGGAGTGAGTCTTCTTTCTGGTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR TCA 90 bp | CATGACCAGAAAGAAGACTCACTCCCAAGCCCCAGGCCTGGTAGAGGGTCTGTCTCCACGAGTCCTTCCTaGTCAAAGTTCTTCTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HDQKEDSLPSPRPGRGSVSTSPS*SKFFSG Trigger: TCCCGAGAAGAACTTTGATCAGGAAGGACTCGTGGA...GACAGACCCTCTACCAGGCCTGGGGCTTGGGAGTGAGTCTTCTTTCTGGTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR GCA 90 bp | CCCATCACCCTTGAAGAAGTGACCCTGTCTGGTGCCATGGCTCAATTCCAGATCTCTATGCTCTCGATCTaGCGCTCGAGCTCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PITLEEVTLSGAMAQFQISMLSI*RSSSTA Trigger: AGCTGTGGAGCTCGAGCGGCAGATCGAGAGCATAGA...GATCTGGAATTGAGCCATGGCACCAGACAGGGTCACTTCTTCAAGGGTGATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR CCA 90 bp | AACGTTGGGAAAATGATCCTGTCCGACTCTGCTGGCATCTGGGCTGGCTTGGCCGAAGGGATGCATCCTTaGTGGTGGCCTTTACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: NVGKMILSDSAGIWAGLAEGMHP*WWPLHL Trigger: AAGGTGTAAAGGCCACCACCAAGGATGCATCCCTTC...GGCCAAGCCAGCCCAGATGCCAGCAGAGTCGGACAGGATCATTTTCCCAACGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR TCA 90 bp | CCCATCACCCTTGAAGAAGTGACCCTGTCTGGTGCCATGGCTCAATTCCAGATCCTGGTATTTGGAACATaGCGTCACATGGGCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PITLEEVTLSGAMAQFQILVFGT*RHMGPD Trigger: ATCCGGGCCCATGTGACGTCATGTTCCAAATACCAG...GATCTGGAATTGAGCCATGGCACCAGACAGGGTCACTTCTTCAAGGGTGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTCAAGGGCTCACACCTAATGCACAATGGAAGCTCTAGAGTGAGGTGGACATGTCCGCAGGGCACCTaGACCGGCTTCTCGAATACT | + |
|
Preference number: 4 (lower is better) Translates to: RVKGSHLMHNGSSRVRWTCPQGT*TGFSNT Trigger: AGTATTCGAGAAGCCGGTGCAGGTGCCCTGCGGACA...TGTCCACCTCACTCTAGAGCTTCCATTGTGCATTAGGTGTGAGCCCTTGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 ENSMUST00000127939.2 |
||
| CDS-3UTR GCA 90 bp | TGGGACAAACAAGGTCACCAGTGGGGAAGACAATGCTGGCAAGAGCCCAGAGGAACATTCCTGCAGGCATaGAGAGCAAAAGACGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WDKQGHQWGRQCWQEPRGTFLQA*RAKDVS Trigger: GGACACGTCTTTTGCTCTGCATGCCTGCAGGAATGT...TCCTCTGGGCTCTTGCCAGCATTGTCTTCCCCACTGGTGACCTTGTTTGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR GCA 90 bp | CTTTACCACTGCCTCCACAACAAAAGGCAGGGTTTAAAACATACTTGCACAAGGAGCTCGGACGCCAGGTaGCAGAGCGCTGCGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: LYHCLHNKRQGLKHTCTRSSDAR*QSAATH Trigger: GTGTGTCGCAGCGCTCTGGCACCTGGCGTCCGAGCT...CCTTGTGCAAGTATGTTTTAAACCCTGCCTTTTGTTGTGGAGGCAGTGGTAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGCAGTAACGTTGGGAAAATGATCCTGTCCGACTCTGCTGGCATCTGGGCTTATCGGTGCTGTGAGTaGGTTTGCAGTGCTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: RSSNVGKMILSDSAGIWAYRCCE*VCSAPR Trigger: TCGTGGAGCACTGCAAACTCACTCACAGCACCGATA...AGCCCAGATGCCAGCAGAGTCGGACAGGATCATTTTCCCAACGTTACTGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGTAGGGAAACAGCAGTAACCAAAACTTCCCCCATCAGACTGCGATGTCACTCTATGCTCTCGATCTaGCGCTCGAGCTCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCRETAVTKTSPIRLRCHSMLSI*RSSSTA Trigger: AGCTGTGGAGCTCGAGCGGCAGATCGAGAGCATAGA...GTGACATCGCAGTCTGATGGGGGAAGTTTTGGTTACTGCTGTTTCCCTACACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR CCA 90 bp | CATGACCAGAAAGAAGACTCACTCCCAAGCCCCAGGCCTGGTAGAGGGTCTGTCGAGCGCTGCAACACCTaGTTTATCATGTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HDQKEDSLPSPRPGRGSVERCNT*FIMSSS Trigger: TGAAGATGACATGATAAACCAGGTGTTGCAGCGCTC...GACAGACCCTCTACCAGGCCTGGGGCTTGGGAGTGAGTCTTCTTTCTGGTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTCAAGGGCTCACACCTAATGCACAATGGAAGCTCTAGAGTGAGGTGGACACTGGTATTTGGAACATaGCGTCACATGGGCCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVKGSHLMHNGSSRVRWTLVFGT*RHMGPD Trigger: ATCCGGGCCCATGTGACGTCATGTTCCAAATACCAG...TGTCCACCTCACTCTAGAGCTTCCATTGTGCATTAGGTGTGAGCCCTTGACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGTAGGGAAACAGCAGTAACCAAAACTTCCCCCATCAGACTGCGATGTCACGTTGGATATGCTCCATaGAGTTGGCACTGCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RCRETAVTKTSPIRLRCHVGYAP*SWHCGS Trigger: GCTACCGCAGTGCCAACTTCATGGAGCATATCCAAC...GTGACATCGCAGTCTGATGGGGGAAGTTTTGGTTACTGCTGTTTCCCTACACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS-3UTR TCA 90 bp | GGTGTACAGATGTGCAGGTGTAGGGAAACAGCAGTAACCAAAACTTCCCCCATCGTTGGATATGCTCCATaGAGTTGGCACTGCGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GVQMCRCRETAVTKTSPIVGYAP*SWHCGS Trigger: GCTACCGCAGTGCCAACTTCATGGAGCATATCCAAC...GATGGGGGAAGTTTTGGTTACTGCTGTTTCCCTACACCTGCACATCTGTACACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS-3UTR GCA 90 bp | GAAACAGCAGTAACCAAAACTTCCCCCATCAGACTGCGATGTCACCCAGGAGGAGGCTTCAGACATTCCTaGAGGCATGCAGAGCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: ETAVTKTSPIRLRCHPGGGFRHS*RHAEQK Trigger: CTTTTGCTCTGCATGCCTGCAGGAATGTCTGAAGCC...TCCTCCTGGGTGACATCGCAGTCTGATGGGGGAAGTTTTGGTTACTGCTGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS-3UTR GCA 90 bp | CAAGAATGTCAGCATATACTCAATAAGAGGGGCACACGACCCAGCCACCTGAGAGGCAAGAAGTCTCTATaGTCTCGATCTGCCGCTCGA | + |
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Preference number: 4 (lower is better) Translates to: QECQHILNKRGTRPSHLRGKKSL*SRSAAR Trigger: TCGAGCGGCAGATCGAGAGCATAGAGACTTCTTGCC...TCTCAGGTGGCTGGGTCGTGTGCCCCTCTTATTGAGTATATGCTGACATTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| 3UTR CAA 72 bp | TCTCGGGACAGTAAGGACAAGGAAAGGTGTATCGGTTaGGGATGTTTCTCGGCTGAAGGGATGCATCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SRDSKDKERCIG*GCFSAEGMHPW Trigger: CCAAGGATGCATCCCTTCAGCCGAGAAACATCCCAAACCGATACACCTTTCCTTGTCCTTACTGTCCCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127939.2 |
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| CDS-3UTR GCA 90 bp | CATAACCACACTTTCTGGAAAGTCATATTAGAAACAGCGAGTGTGATGAAGGACCAGGTGCCAGAGCGCTaGGACACACCCCACAGACAG | + |
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Preference number: 4 (lower is better) Translates to: HNHTFWKVILETASVMKDQVPER*DTPHRQ Trigger: CTGTCTGTGGGGTGTGTCGCAGCGCTCTGGCACCTG...GTCCTTCATCACACTCGCTGTTTCTAATATGACTTTCCAGAAAGTGTGGTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS-3UTR CCA 90 bp | CCCATCACCCTTGAAGAAGTGACCCTGTCTGGTGCCATGGCTCAATTCCAGATCGAGCGCTGCAACACCTaGTTTATCATGTCATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PITLEEVTLSGAMAQFQIERCNT*FIMSSS Trigger: TGAAGATGACATGATAAACCAGGTGTTGCAGCGCTC...GATCTGGAATTGAGCCATGGCACCAGACAGGGTCACTTCTTCAAGGGTGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS-3UTR TCA 90 bp | CTTTACCACTGCCTCCACAACAAAAGGCAGGGTTTAAAACATACTTGCACAAGGTCCACGAGTCCTTCCTaGTCAAAGTTCTTCTCGGGA | + |
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Preference number: 4 (lower is better) Translates to: LYHCLHNKRQGLKHTCTRSTSPS*SKFFSG Trigger: TCCCGAGAAGAACTTTGATCAGGAAGGACTCGTGGA...CCTTGTGCAAGTATGTTTTAAACCCTGCCTTTTGTTGTGGAGGCAGTGGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS-3UTR GCA 90 bp | ACTCATCAGCATCAAAGTAAACCAAAAAGCCACACACCCTACACCTTCTCCCTATCAATGATGGAGCGCTaGAACACCTGGTTTATCATG | + |
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Preference number: 4 (lower is better) Translates to: THQHQSKPKSHTPYTFSLSMMER*NTWFIM Trigger: CATGATAAACCAGGTGTTGCAGCGCTCCATCATTGA...TAGGGAGAAGGTGTAGGGTGTGTGGCTTTTTGGTTTACTTTGATGCTGATGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS-3UTR CCA 90 bp | ACTCATCAGCATCAAAGTAAACCAAAAAGCCACACACCCTACACCTTCTCCCTATGTAATTCTGGTATTTaGAACATGACGTCACATGGG | + |
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Preference number: 4 (lower is better) Translates to: THQHQSKPKSHTPYTFSLCNSGI*NMTSHG Trigger: CCCATGTGACGTCATGTTCCAAATACCAGAATTACA...TAGGGAGAAGGTGTAGGGTGTGTGGCTTTTTGGTTTACTTTGATGCTGATGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS-3UTR CCA 90 bp | CATAACCACACTTTCTGGAAAGTCATATTAGAAACAGCGAGTGTGATGAAGGACTGTAATTCTGGTATTTaGAACATGACGTCACATGGG | + |
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Preference number: 4 (lower is better) Translates to: HNHTFWKVILETASVMKDCNSGI*NMTSHG Trigger: CCCATGTGACGTCATGTTCCAAATACCAGAATTACA...GTCCTTCATCACACTCGCTGTTTCTAATATGACTTTCCAGAAAGTGTGGTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS GCA 90 bp | TCTGCCGCTCGAGCTCCACAGCTCGGACGCCAGGTGCCAGAGCGCTaGGACACACCCCACAGACAGGTTTCTTCGGCTTCAGACATTCCT | + |
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Preference number: 5 (lower is better) Translates to: SAARAPQLGRQVPER*DTPHRQVSSASDIP Trigger: AGGAATGTCTGAAGCCGAAGAAACCTGTCTGTGGGGTGTGTCGCAGCGCTCTGGCACCTGGCGTCCGAGCTGTGGAGCTCGAGCGGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS GCA 90 bp | TATGCTCTCGATCTGCCGCTCGAGCTCCACAGCTCGGACGCCAGGTaGCAGAGCGCTGCGACACACCCCACAGACAGGTTTCTTCGGCTT | + |
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Preference number: 5 (lower is better) Translates to: YALDLPLELHSSDAR*QSAATHPTDRFLRL Trigger: AAGCCGAAGAAACCTGTCTGTGGGGTGTGTCGCAGCGCTCTGGCACCTGGCGTCCGAGCTGTGGAGCTCGAGCGGCAGATCGAGAGCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS GCA 90 bp | CTGCGACACACCCCACAGACAGGTTTCTTCGGCTTCAGACATTCCTaGAGGCATGCAGAGCAAAAGACGTGTCCGCAGGGCACCTGCACC | + |
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Preference number: 5 (lower is better) Translates to: LRHTPQTGFFGFRHS*RHAEQKTCPQGTCT Trigger: GGTGCAGGTGCCCTGCGGACACGTCTTTTGCTCTGCATGCCTGCAGGAATGTCTGAAGCCGAAGAAACCTGTCTGTGGGGTGTGTCGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS GCA 90 bp | AAATTCTTACGGCAGCCATGGCAAGAAGTCTCTATGCTCTCGATCTaGCGCTCGAGCTCCACAGCTCGGACGCCAGGTGCCAGAGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: KFLRQPWQEVSMLSI*RSSSTARTPGARAL Trigger: CAGCGCTCTGGCACCTGGCGTCCGAGCTGTGGAGCTCGAGCGGCAGATCGAGAGCATAGAGACTTCTTGCCATGGCTGCCGTAAGAATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS GCA 72 bp | GATCTGCCGCTCGAGCTCCACAGCTCGGACGCCAGGTaGCAGAGCGCTGCGACACACCCCACAGACAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: DLPLELHSSDAR*QSAATHPTDRF Trigger: AAACCTGTCTGTGGGGTGTGTCGCAGCGCTCTGGCACCTGGCGTCCGAGCTGTGGAGCTCGAGCGGCAGATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS GCA 72 bp | CGAGCTCCACAGCTCGGACGCCAGGTGCCAGAGCGCTaGGACACACCCCACAGACAGGTTTCTTCGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RAPQLGRQVPER*DTPHRQVSSAS Trigger: TGAAGCCGAAGAAACCTGTCTGTGGGGTGTGTCGCAGCGCTCTGGCACCTGGCGTCCGAGCTGTGGAGCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS GCA 72 bp | CGGCAGCCATGGCAAGAAGTCTCTATGCTCTCGATCTaGCGCTCGAGCTCCACAGCTCGGACGCCAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: RQPWQEVSMLSI*RSSSTARTPGA Trigger: GGCACCTGGCGTCCGAGCTGTGGAGCTCGAGCGGCAGATCGAGAGCATAGAGACTTCTTGCCATGGCTGCCG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS GCA 72 bp | GACAGGTTTCTTCGGCTTCAGACATTCCTGCAGGCATaGAGAGCAAAAGACGTGTCCGCAGGGCACCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: DRFLRLQTFLQA*RAKDVSAGHLH Trigger: GTGCAGGTGCCCTGCGGACACGTCTTTTGCTCTGCATGCCTGCAGGAATGTCTGAAGCCGAAGAAACCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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| CDS GCA 72 bp | ACCCCACAGACAGGTTTCTTCGGCTTCAGACATTCCTaGAGGCATGCAGAGCAAAAGACGTGTCCGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: TPQTGFFGFRHS*RHAEQKTCPQG Trigger: GCCCTGCGGACACGTCTTTTGCTCTGCATGCCTGCAGGAATGTCTGAAGCCGAAGAAACCTGTCTGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000078050.7 ENSMUST00000109214.8 |
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