Pregenerated sensors for RNF112 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010086Ensembl transcript IDs: ENSMUST00000054927.14, ENSMUST00000060255.14, ENSMUST00000102661.4
Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CCCAGAAGTCTCTTTAGAAATCTCCATCCCCCGAGAGAGGCCCCCTaGCCACAAGCTTTCTGGAGGCTTGGCGTTCAGAGGGCTGCATCA | + |
Preference number: 1 (lower is better) Translates to: PRSLFRNLHPPREAP*PQAFWRLGVQRAAS Trigger: TGATGCAGCCCTCTGAACGCCAAGCCTCCAGAAAGCTTGTGGGCAGGGGGCCTCTCTCGGGGGATGGAGATTTCTAAAGAGACTTCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR CCA 90 bp | GGGGCAAATTTCCAGCCCAGGCCCTCCAGGGAAATAAACTGGAACTaGGTAGAGGAGGTGGGGCCTTATGTGGTGGGAGATCCTAGGTTC | + |
Preference number: 1 (lower is better) Translates to: GANFQPRPSREINWN*VEEVGPYVVGDPRF Trigger: GAACCTAGGATCTCCCACCACATAAGGCCCCACCTCCTCTACCCAGTTCCAGTTTATTTCCCTGGAGGGCCTGGGCTGGAAATTTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR TCA 90 bp | GGGCATTCAACAAGGCCAGTATATACGTGGTCCCCTCTGAGTCCCTaGTGTCCGCACCCTTCCTACTGCCTTTCACGTATTTCACGCTTC | + |
Preference number: 1 (lower is better) Translates to: GHSTRPVYTWSPLSP*CPHPSYCLSRISRF Trigger: GAAGCGTGAAATACGTGAAAGGCAGTAGGAAGGGTGCGGACATCAGGGACTCAGAGGGGACCACGTATATACTGGCCTTGTTGAATGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR GCA 90 bp | TCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTaGTTTAGCACAGAATGCAATCGGAGGTGTGGTTCTTTGGCATGT | + |
Preference number: 1 (lower is better) Translates to: SCTFPSHTLAEPGTD*FSTECNRRCGSLAC Trigger: ACATGCCAAAGAACCACACCTCCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR CCA 90 bp | GTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTaGCAGAACCTGGCACGGACTGCTTTAGCACAGAATGCAATCGGA | + |
Preference number: 1 (lower is better) Translates to: VKRRSSFPALSLPTL*QNLARTALAQNAIG Trigger: TCCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR CCA 90 bp | GCACGGACTGCTTTAGCACAGAATGCAATCGGAGGTGTGGTTCTTTaGCATGTAATCTGTGTTGATCCATCCAAATGGGCTTGGCACAGG | + |
Preference number: 1 (lower is better) Translates to: ARTALAQNAIGGVVL*HVICVDPSKWAWHR Trigger: CCTGTGCCAAGCCCATTTGGATGGATCAACACAGATTACATGCCAAAGAACCACACCTCCGATTGCATTCTGTGCTAAAGCAGTCCGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR TCA 90 bp | TCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTAGCACAGAATGCAATCGGATCTGGACACCCAACTaGAGAGCAGGGAGGCCAGCC | + |
Preference number: 2 (lower is better) Translates to: SHTLAEPGTDCFSTECNRIWTPN*RAGRPA Trigger: GGCTGGCCTCCCTGCTCTTCAGTTGGGTGTCCAGAT...CCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR CCA 90 bp | GACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTAGCCAGTGTTTGACATaGGGCATTCAACAAGGCCAG | + |
Preference number: 2 (lower is better) Translates to: DTQLKSREASQAWPSGAVSQCLT*GIQQGQ Trigger: CTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCT...AACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR TCA 90 bp | GTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCTCCCCTCTGAGTCCCTaGTGTCCGCACCCTTCCTAC | + |
Preference number: 2 (lower is better) Translates to: VGDPRFQRVAIIQSQKQASPLSP*CPHPSY Trigger: GTAGGAAGGGTGCGGACATCAGGGACTCAGAGGGGA...GGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR CCA 90 bp | GACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTAAACGAATGGGGTTCTaGATCCAGGGGCAAATTTCC | + |
Preference number: 2 (lower is better) Translates to: DTQLKSREASQAWPSGAVKRMGF*IQGQIS Trigger: GGAAATTTGCCCCTGGATCCAGAACCCCATTCGTTT...AACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR GCA 90 bp | AGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACTATCATCCCCATCCCTaGTCTGTGACCCCTCCTTTT | + |
Preference number: 2 (lower is better) Translates to: SREASQAWPSGAVLETSHYHPHP*SVTPPF Trigger: AAAAGGAGGGGTCACAGAGCAGGGATGGGGATGATA...GTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR CCA 90 bp | AGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACAGCCAGTGTTTGACATaGGGCATTCAACAAGGCCAG | + |
Preference number: 2 (lower is better) Translates to: SREASQAWPSGAVLETSHSQCLT*GIQQGQ Trigger: CTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCT...GTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR CCA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAAGGACTGCAGGAGGCTaGGGTACAGGGCGGTTCAGG | + |
Preference number: 2 (lower is better) Translates to: MLKDGARFLHFPFPHFGRRTAGG*GTGRFR Trigger: CCTGAACCGCCCTGTACCCCAGCCTCCTGCAGTCCT...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR TCA 90 bp | AGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTAGCTCAGCCAGTGTTTaGCATGGGGCATTCAACAAG | + |
Preference number: 2 (lower is better) Translates to: SSFPALSLPTLWQNLARTSSASV*HGAFNK Trigger: CTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCT...AGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR CCA 90 bp | AGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTAGCCAGTGTTTGACATaGGGCATTCAACAAGGCCAG | + |
Preference number: 2 (lower is better) Translates to: SSFPALSLPTLWQNLARTSQCLT*GIQQGQ Trigger: CTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCT...AGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR TCA 90 bp | GCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTATAGCTCCCATCCCTGCTCTGTaGCCCCTCCTTTTTCTTCCC | + |
Preference number: 2 (lower is better) Translates to: AWPSGAVLETSHHSRIIAPIPAL*PLLFLP Trigger: GGGAAGAAAAAGGAGGGGTCACAGAGCAGGGATGGG...AGCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR GCA 90 bp | TCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTAGCACAGAATGCAATCGGTATCATCCCCATCCCTaGTCTGTGACCCCTCCTTTT | + |
Preference number: 2 (lower is better) Translates to: SHTLAEPGTDCFSTECNRYHPHP*SVTPPF Trigger: AAAAGGAGGGGTCACAGAGCAGGGATGGGGATGATA...CCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR CCA 90 bp | AGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTAAACGAATGGGGTTCTaGATCCAGGGGCAAATTTCC | + |
Preference number: 2 (lower is better) Translates to: SSFPALSLPTLWQNLARTKRMGF*IQGQIS Trigger: GGAAATTTGCCCCTGGATCCAGAACCCCATTCGTTT...AGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR CCA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAGAGGCCAGCCAAGCCTaGCCTTCTGGAGCAGTTTTG | + |
Preference number: 2 (lower is better) Translates to: MLKDGARFLHFPFPHFGREASQA*PSGAVL Trigger: CAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTC...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR CAA 90 bp | CTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTaGGAAACAAGTCACCACTCCAGAATTATAGCTCTGTCTATCATC | + |
Preference number: 2 (lower is better) Translates to: LKSREASQAWPSGAV*ETSHHSRIIALSII Trigger: GATGATAGACAGAGCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR CCA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGACCAAGCCTGGCCTTCTaGAGCAGTTTTGGAAACAAG | + |
Preference number: 2 (lower is better) Translates to: MLKDGARFLHFPFPHFGRPSLAF*SSFGNK Trigger: CTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGG...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR TCA 90 bp | CTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGAGCTCAGCCAGTGTTTaGCATGGGGCATTCAACAAG | + |
Preference number: 2 (lower is better) Translates to: LLAPKSVMLGPIPTVKRMSSASV*HGAFNK Trigger: CTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCT...CATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR CCA 72 bp | CATCCCCCGAGAGAGGCCCCCTGCCCACAAGCTTTCTaGAGGCTTGGCGTTCAGAGGGCTGCATCAAGGGGG | + |
Preference number: 3 (lower is better) Translates to: HPPREAPCPQAF*RLGVQRAASRG Trigger: CCCCCTTGATGCAGCCCTCTGAACGCCAAGCCTCCAGAAAGCTTGTGGGCAGGGGGCCTCTCTCGGGGGATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR TCA 72 bp | ACAGGGCGGTTCAGGACACACATCTGGACACCCAACTaGAGAGCAGGGAGGCCAGCCAAGCCTGGCCTTCTG | + |
Preference number: 3 (lower is better) Translates to: TGRFRTHIWTPN*RAGRPAKPGLL Trigger: CAGAAGGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTCCAGATGTGTGTCCTGAACCGCCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR GCA 72 bp | CCCACAAGCTTTCTGGAGGCTTGGCGTTCAGAGGGCTaGATCAAGGGGGTCTTACAGTGTGGCGCAGAGGCC | + |
Preference number: 3 (lower is better) Translates to: PTSFLEAWRSEG*IKGVLQCGAEA Trigger: GGCCTCTGCGCCACACTGTAAGACCCCCTTGATGCAGCCCTCTGAACGCCAAGCCTCCAGAAAGCTTGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR CAA 90 bp | GACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTCAGCTCAGCCAGTGTTaGACATGGGGCATTCAACAA | + |
Preference number: 3 (lower is better) Translates to: DTQLKSREASQAWPSGAVQLSQC*TWGIQQ Trigger: TTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTG...AACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR CAA 90 bp | AGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCAGCTCAGCCAGTGTTaGACATGGGGCATTCAACAA | + |
Preference number: 3 (lower is better) Translates to: SREASQAWPSGAVLETSHQLSQC*TWGIQQ Trigger: TTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTG...GTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR TCA 72 bp | GGCATTCAACAAGGCCAGTATATACGTGGTCCCCTCTaGGTCCCTGATGTCCGCACCCTTCCTACTGCCTTT | + |
Preference number: 3 (lower is better) Translates to: GIQQGQYIRGPL*VPDVRTLPTAF Trigger: AAAGGCAGTAGGAAGGGTGCGGACATCAGGGACTCAGAGGGGACCACGTATATACTGGCCTTGTTGAATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR CCA 72 bp | CGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTaGCAGAACCTGGCACGGACTGCTTTAGCACAGAAT | + |
Preference number: 3 (lower is better) Translates to: RSSFPALSLPTL*QNLARTALAQN Trigger: ATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR TCA 72 bp | ACAAGGCCAGTATATACGTGGTCCCCTCTGAGTCCCTaGTGTCCGCACCCTTCCTACTGCCTTTCACGTATT | + |
Preference number: 3 (lower is better) Translates to: TRPVYTWSPLSP*CPHPSYCLSRI Trigger: AATACGTGAAAGGCAGTAGGAAGGGTGCGGACATCAGGGACTCAGAGGGGACCACGTATATACTGGCCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR GCA 72 bp | TTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTaGTTTAGCACAGAATGCAATCGGAGGTGTGGTTCT | + |
Preference number: 3 (lower is better) Translates to: FPSHTLAEPGTD*FSTECNRRCGS Trigger: AGAACCACACCTCCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR TCA 72 bp | AATCGGAGGTGTGGTTCTTTGGCATGTAATCTGTGTTaGTCCATCCAAATGGGCTTGGCACAGGGCACAGGC | + |
Preference number: 3 (lower is better) Translates to: NRRCGSLACNLC*SIQMGLAQGTG Trigger: GCCTGTGCCCTGTGCCAAGCCCATTTGGATGGATCAACACAGATTACATGCCAAAGAACCACACCTCCGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR-3UTR CAA 90 bp | CCTTATGTGGTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGCAGCTCAGCCAGTGTTaGACATGGGGCATTCAACAA | + |
Preference number: 3 (lower is better) Translates to: PYVVGDPRFQRVAIIQSQQLSQC*TWGIQQ Trigger: TTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTG...CTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCACCACATAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR GCA 72 bp | TTGGCAGAACCTGGCACGGACTGCTTTAGCACAGAATaGAATCGGAGGTGTGGTTCTTTGGCATGTAATCTG | + |
Preference number: 3 (lower is better) Translates to: LAEPGTDCFSTE*NRRCGSLACNL Trigger: CAGATTACATGCCAAAGAACCACACCTCCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GGACACACATCTGGACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCGCCCACCACACCCCCTaGCAGGCCCATGAGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: GHTSGHPTEEQGGQPSLAAHHTP*QAHEPS Trigger: GCTGGGCTCATGGGCCTGGCAGGGGGTGTGGTGGGC...GGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTCCAGATGTGTGTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCGGGCGGCTCCCGGGTTaGGGAGGGACGGTGTCCCAG | + |
Preference number: 4 (lower is better) Translates to: AGRPAKPGLLEQFWKQVTGRLPG*GGTVSQ Trigger: CTGGGACACCGTCCCTCCCCAACCCGGGAGCCGCCC...GGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | TCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCGCTGCTGCCATGCCTaGGCCCACCACACCCCCTGC | + |
Preference number: 4 (lower is better) Translates to: SGFWTHRKPPAQPVFDMGRCCHA*AHHTPC Trigger: GCAGGGGGTGTGGTGGGCGCAGGCATGGCAGCAGCG...CCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GGACACACATCTGGACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCGAAGGCCTTGGCTTCTaGCTGCAGCTCGGCTTCCAG | + |
Preference number: 4 (lower is better) Translates to: GHTSGHPTEEQGGQPSLAEGLGF*LQLGFQ Trigger: CTGGAAGCCGAGCTGCAGGCAGAAGCCAAGGCCTTC...GGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTCCAGATGTGTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACACCGCGGCCCCAGCTaGTACCATCCCAGCCTCAGC | + |
Preference number: 4 (lower is better) Translates to: QGGQPSLAFWSSFGNKSPHRGPS*YHPSLS Trigger: GCTGAGGCTGGGATGGTAGCAGCTGGGGCCGCGGTG...TGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTGCCTTTCCAGACAGATaGAGCAGGTGGGCGGCTCCC | + |
Preference number: 4 (lower is better) Translates to: DTQLKSREASQAWPSGAVAFPDR*SRWAAP Trigger: GGGAGCCGCCCACCTGCTCCATCTGTCTGGAAAGGC...AACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTGAAGGCCTTGGCTTCTaGCTGCAGCTCGGCTTCCAG | + |
Preference number: 4 (lower is better) Translates to: DTQLKSREASQAWPSGAVEGLGF*LQLGFQ Trigger: CTGGAAGCCGAGCTGCAGGCAGAAGCCAAGGCCTTC...AACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | TCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTAGCACAGAATGCAATCGGGCCCACCACACCCCCTaGCAGGCCCATGAGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: SHTLAEPGTDCFSTECNRAHHTP*QAHEPS Trigger: GCTGGGCTCATGGGCCTGGCAGGGGGTGTGGTGGGC...CCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | TCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTAGCACAGAATGCAATCGGCGCTGCTGCCATGCCTaGGCCCACCACACCCCCTGC | + |
Preference number: 4 (lower is better) Translates to: SHTLAEPGTDCFSTECNRRCCHA*AHHTPC Trigger: GCAGGGGGTGTGGTGGGCGCAGGCATGGCAGCAGCG...CCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCTTGCACCCTATCCGGGGCGGCTCCCGGGTTaGGGAGGGACGGTGTCCCAG | + |
Preference number: 4 (lower is better) Translates to: VPESSNYPEPETGLAPYPGRLPG*GGTVSQ Trigger: CTGGGACACCGTCCCTCCCCAACCCGGGAGCCGCCC...CGGATAGGGTGCAAGGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CCTCCTTTTTCTTCCCTGTTAGCGGGGCTCCTAGCTCCAAAGTCAGTTATGCTGGGGCGGCTCCCGGGTTaGGGAGGGACGGTGTCCCAG | + |
Preference number: 4 (lower is better) Translates to: PPFSSLLAGLLAPKSVMLGRLPG*GGTVSQ Trigger: CTGGGACACCGTCCCTCCCCAACCCGGGAGCCGCCC...CAGCATAACTGACTTTGGAGCTAGGAGCCCCGCTAACAGGGAAGAAAAAGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GGACACACATCTGGACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCGCAGCTCCTGGACCTTaGGGTATTTGCCGGACAGCT | + |
Preference number: 4 (lower is better) Translates to: GHTSGHPTEEQGGQPSLAAAPGP*GICRTA Trigger: AGCTGTCCGGCAAATACCCCAAGGTCCAGGAGCTGC...GGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTCCAGATGTGTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR CAA 72 bp | CGAGAGAGGCCCCCTGCCCACAAGCTTTCTGGAGGCTaGGCGTTCAGAGGGCTGCATCAAGGGGGTCTTACA | + |
Preference number: 4 (lower is better) Translates to: RERPPAHKLSGG*AFRGLHQGGLT Trigger: TGTAAGACCCCCTTGATGCAGCCCTCTGAACGCCAAGCCTCCAGAAAGCTTGTGGGCAGGGGGCCTCTCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | GGACACACATCTGGACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCGGATGCGGTGTGTGCTaGAGCATCGGATGCAGAAGT | + |
Preference number: 4 (lower is better) Translates to: GHTSGHPTEEQGGQPSLAGCGVC*SIGCRS Trigger: ACTTCTGCATCCGATGCTTCAGCACACACCGCATCC...GGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTCCAGATGTGTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | ACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCTAGCTGCTGCCCTGTaGGCAGGCGTCTGTCTCCCC | + |
Preference number: 4 (lower is better) Translates to: THRKPPAQPVFDMGHSTRLAAAL*AGVCLP Trigger: GGGGAGACAGACGCCTGCTCACAGGGCAGCAGCTAG...CCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | TCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGACAGCACAGGTCTCCTaGAGTGCAGGGGGCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: SGFWTHRKPPAQPVFDMGTAQVS*SAGGSG Trigger: GCCACTGCCCCCTGCACTGCAGGAGACCTGTGCTGT...CCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GGACACACATCTGGACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCAAGGACTTTCCTGAGTaGTGCTCTCCCAGGACAGCC | + |
Preference number: 4 (lower is better) Translates to: GHTSGHPTEEQGGQPSLAKDFPE*CSPRTA Trigger: GGCTGTCCTGGGAGAGCAGCACTCAGGAAAGTCCTT...GGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTCCAGATGTGTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | AGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTAGGCAGAGACCCCTCTaGTCTGGGCCTGCCGCTGTC | + |
Preference number: 4 (lower is better) Translates to: SSFPALSLPTLWQNLARTRQRPL*SGPAAV Trigger: GACAGCGGCAGGCCCAGAGCAGAGGGGTCTCTGCCT...AGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | AAACAGGCCTTGCACCCTATCCGCTGTACTCCAAGTACAGCCTCGTGGCCAGAAGCCTTGGCTTCTGCCTaGAGCTCGGCTTCCAGGGCC | + |
Preference number: 4 (lower is better) Translates to: KQALHPIRCTPSTASWPEALASA*SSASRA Trigger: GGCCCTGGAAGCCGAGCTGCAGGCAGAAGCCAAGGC...TTCTGGCCACGAGGCTGTACTTGGAGTACAGCGGATAGGGTGCAAGGCCTGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCACGCCGCTGCTGCCATaGCTGCGCCCACCACACCCC | + |
Preference number: 4 (lower is better) Translates to: VGDPRFQRVAIIQSQKQATPLLP*LRPPHP Trigger: GGGGTGTGGTGGGCGCAGGCATGGCAGCAGCGGCGT...GGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTGACAGATGGAGCAGGTaGGCGGCTCCCGGGTTGGGG | + |
Preference number: 4 (lower is better) Translates to: VSCTFPSHTLAEPGTDCFDRWSR*AAPGLG Trigger: CCCCAACCCGGGAGCCGCCCACCTGCTCCATCTGTC...AAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTGCAGCTCCTGGACCTTaGGGTATTTGCCGGACAGCT | + |
Preference number: 4 (lower is better) Translates to: DTQLKSREASQAWPSGAVAAPGP*GICRTA Trigger: AGCTGTCCGGCAAATACCCCAAGGTCCAGGAGCTGC...AACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | AGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCCTACCGCGGCCAGGTaGCCACAGAAGCGCATTGTG | + |
Preference number: 4 (lower is better) Translates to: SREASQAWPSGAVLETSHPTAAR*PQKRIV Trigger: CACAATGCGCTTCTGTGGCCACCTGGCCGCGGTAGG...GTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | GCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCTCACTCCAGTACCCTTaGCAGCGGCTCTTAGCGTGC | + |
Preference number: 4 (lower is better) Translates to: AGRPAKPGLLEQFWKQVTSLQYP*QRLLAC Trigger: GCACGCTAAGAGCCGCTGTCAAGGGTACTGGAGTGA...GGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTAGGCAGAGACCCCTCTaGTCTGGGCCTGCCGCTGTC | + |
Preference number: 4 (lower is better) Translates to: VSCTFPSHTLAEPGTDCFRQRPL*SGPAAV Trigger: GACAGCGGCAGGCCCAGAGCAGAGGGGTCTCTGCCT...AAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CCTTATGTGGTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGCGCTGCTGCCATGCCTaGGCCCACCACACCCCCTGC | + |
Preference number: 4 (lower is better) Translates to: PYVVGDPRFQRVAIIQSQRCCHA*AHHTPC Trigger: GCAGGGGGTGTGGTGGGCGCAGGCATGGCAGCAGCG...CTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCACCACATAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCCACCGCGGCCCCAGCTaGTACCATCCCAGCCTCAGC | + |
Preference number: 4 (lower is better) Translates to: VGDPRFQRVAIIQSQKQAHRGPS*YHPSLS Trigger: GCTGAGGCTGGGATGGTAGCAGCTGGGGCCGCGGTG...GGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | AAACAGGCCTTGCACCCTATCCGCTGTACTCCAAGTACAGCCTCGTGGCCAGAACCTCCCTGCACAGCCTaGCCCATCCAGCCTTGTGCT | + |
Preference number: 4 (lower is better) Translates to: KQALHPIRCTPSTASWPEPPCTA*PIQPCA Trigger: AGCACAAGGCTGGATGGGCCAGGCTGTGCAGGGAGG...TTCTGGCCACGAGGCTGTACTTGGAGTACAGCGGATAGGGTGCAAGGCCTGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS-3UTR CCA 90 bp | TCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGCCTTTCCAGACAGATaGAGCAGGTGGGCGGCTCCC | + |
Preference number: 4 (lower is better) Translates to: SSGFWTHRKPPAQPVFDMAFPDR*SRWAAP Trigger: GGGAGCCGCCCACCTGCTCCATCTGTCTGGAAAGGC...CATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTCTCCTTGCTCAGTTCTaGGCTCATGACATCCCCCGT | + |
Preference number: 4 (lower is better) Translates to: DTQLKSREASQAWPSGAVLLAQF*AHDIPR Trigger: ACGGGGGATGTCATGAGCCCAGAACTGAGCAAGGAG...AACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCAAACAGGGCCACACCATaGCGGGCCAAGATGGCATCC | + |
Preference number: 4 (lower is better) Translates to: QGGQPSLAFWSSFGNKSPNRATP*RAKMAS Trigger: GGATGCCATCTTGGCCCGCCATGGTGTGGCCCTGTT...TGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | ACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCCTACCGCGGCCAGGTaGCCACAGAAGCGCATTGTG | + |
Preference number: 4 (lower is better) Translates to: THRKPPAQPVFDMGHSTRPTAAR*PQKRIV Trigger: CACAATGCGCTTCTGTGGCCACCTGGCCGCGGTAGG...CCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | GCCTCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACACAAAAAGCAGTGACTaGCAGGACGGGCCTCGGCAT | + |
Preference number: 4 (lower is better) Translates to: ASSGFWTHRKPPAQPVFDTKSSD*QDGPRH Trigger: ATGCCGAGGCCCGTCCTGTCAGTCACTGCTTTTTGT...GTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | TTTTCTTCCCTGTTAGCGGGGCTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTCGGCTCTTAGCGTGCTaGGGGGCTGTGCTCAGCACG | + |
Preference number: 4 (lower is better) Translates to: FSSLLAGLLAPKSVMLGPRLLAC*GAVLST Trigger: CGTGCTGAGCACAGCCCCTCAGCACGCTAAGAGCCG...AGGTCCCAGCATAACTGACTTTGGAGCTAGGAGCCCCGCTAACAGGGAAGAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | AGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACTCACTCCAGTACCCTTaGCAGCGGCTCTTAGCGTGC | + |
Preference number: 4 (lower is better) Translates to: SREASQAWPSGAVLETSHSLQYP*QRLLAC Trigger: GCACGCTAAGAGCCGCTGTCAAGGGTACTGGAGTGA...GTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | GGACACACATCTGGACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCAGCCAGAGAGATTCTTaGTCTCCTGTGCTAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: GHTSGHPTEEQGGQPSLASQRDS*SPVLAA Trigger: AGCAGCTAGCACAGGAGATCAAGAATCTCTCTGGCT...GGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTCCAGATGTGTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | AAACAGGCCTTGCACCCTATCCGCTGTACTCCAAGTACAGCCTCGTGGCCAGAAGCCCATCCAGCCTTGTaGTTCCTCCCTGGGGAGAAC | + |
Preference number: 4 (lower is better) Translates to: KQALHPIRCTPSTASWPEAHPAL*FLPGEN Trigger: GTTCTCCCCAGGGAGGAAGCACAAGGCTGGATGGGC...TTCTGGCCACGAGGCTGTACTTGGAGTACAGCGGATAGGGTGCAAGGCCTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS-3UTR GCA 90 bp | TTTTCTTCCCTGTTAGCGGGGCTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTACAGGTCTCCTGCAGTaGAGGGGGCAGTGGCCGCTG | + |
Preference number: 4 (lower is better) Translates to: FSSLLAGLLAPKSVMLGPTGLLQ*RGQWPL Trigger: CAGCGGCCACTGCCCCCTGCACTGCAGGAGACCTGT...AGGTCCCAGCATAACTGACTTTGGAGCTAGGAGCCCCGCTAACAGGGAAGAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CCTCCTTTTTCTTCCCTGTTAGCGGGGCTCCTAGCTCCAAAGTCAGTTATGCTGACAGGTCTCCTGCAGTaGAGGGGGCAGTGGCCGCTG | + |
Preference number: 4 (lower is better) Translates to: PPFSSLLAGLLAPKSVMLTGLLQ*RGQWPL Trigger: CAGCGGCCACTGCCCCCTGCACTGCAGGAGACCTGT...CAGCATAACTGACTTTGGAGCTAGGAGCCCCGCTAACAGGGAAGAAAAAGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTACAGCACAGGTCTCCTaGAGTGCAGGGGGCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: VSCTFPSHTLAEPGTDCFTAQVS*SAGGSG Trigger: GCCACTGCCCCCTGCACTGCAGGAGACCTGTGCTGT...AAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCCAGTATGCCTTGGCTTCTGCCTaGAGCTCGGCTTCCAGGGCC | + |
Preference number: 4 (lower is better) Translates to: VNPQLSQCLTWGIQQGQYALASA*SSASRA Trigger: GGCCCTGGAAGCCGAGCTGCAGGCAGAAGCCAAGGC...ATACTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTATAGCTGCCCACCACACCCCCTaGCAGGCCCATGAGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: AWPSGAVLETSHHSRIIAAHHTP*QAHEPS Trigger: GCTGGGCTCATGGGCCTGGCAGGGGGTGTGGTGGGC...AGCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACGCCGCTGCTGCCATaGCTGCGCCCACCACACCCC | + |
Preference number: 4 (lower is better) Translates to: MLKDGARFLHFPFPHFGRTPLLP*LRPPHP Trigger: GGGGTGTGGTGGGCGCAGGCATGGCAGCAGCGGCGT...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCCAGTATATACGTGGTGACAGATGGAGCAGGTaGGCGGCTCCCGGGTTGGGG | + |
Preference number: 4 (lower is better) Translates to: QLSQCLTWGIQQGQYIRGDRWSR*AAPGLG Trigger: CCCCAACCCGGGAGCCGCCCACCTGCTCCATCTGTC...ACCACGTATATACTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | ACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCCGAGGAGCAGCTCCTaGACCTTGGGGTATTTGCCG | + |
Preference number: 4 (lower is better) Translates to: THRKPPAQPVFDMGHSTRPRSSS*TLGYLP Trigger: CGGCAAATACCCCAAGGTCCAGGAGCTGCTCCTCGG...CCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | TCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGCCGAGGAGCAGCTCCTaGACCTTGGGGTATTTGCCG | + |
Preference number: 4 (lower is better) Translates to: SSGFWTHRKPPAQPVFDMPRSSS*TLGYLP Trigger: CGGCAAATACCCCAAGGTCCAGGAGCTGCTCCTCGG...CATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTGTTGCCTCTGGGGCTaGCTTGGTCTTTGTTTACCC | + |
Preference number: 4 (lower is better) Translates to: DTQLKSREASQAWPSGAVCCLWG*LGLCLP Trigger: GGGTAAACAAAGACCAAGCCAGCCCCAGAGGCAACA...AACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGGGGGCGTCTGTCTCCCCTaGCCACGGCACGCCCCTCAC | + |
Preference number: 4 (lower is better) Translates to: PSSKVSYAGTYPNCKTNGGVCLP*PRHAPH Trigger: GTGAGGGGCGTGCCGTGGCCAGGGGAGACAGACGCC...CCCATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTATAGCTGGCGTCTGTCTCCCCTaGCCACGGCACGCCCCTCAC | + |
Preference number: 4 (lower is better) Translates to: AWPSGAVLETSHHSRIIAGVCLP*PRHAPH Trigger: GTGAGGGGCGTGCCGTGGCCAGGGGAGACAGACGCC...AGCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | AGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACACAAAAAGCAGTGACTaGCAGGACGGGCCTCGGCAT | + |
Preference number: 4 (lower is better) Translates to: SREASQAWPSGAVLETSHTKSSD*QDGPRH Trigger: ATGCCGAGGCCCGTCCTGTCAGTCACTGCTTTTTGT...GTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
||
CDS-3UTR TCA 90 bp | GACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTCGTTTGCCAAGCCGATaGCAAAAAGCAGTGACTGAC | + |
Preference number: 4 (lower is better) Translates to: DTQLKSREASQAWPSGAVRLPSR*QKAVTD Trigger: GTCAGTCACTGCTTTTTGTCATCGGCTTGGCAAACG...AACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | CAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCAGGATGCGGTGTGTGCTaGAGCATCGGATGCAGAAGT | + |
Preference number: 4 (lower is better) Translates to: QGGQPSLAFWSSFGNKSPGCGVC*SIGCRS Trigger: ACTTCTGCATCCGATGCTTCAGCACACACCGCATCC...TGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | TCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGAAGGAAGGACTTTCCTaGGTGCTGCTCTCCCAGGAC | + |
Preference number: 4 (lower is better) Translates to: SGFWTHRKPPAQPVFDMGKEGLS*VLLSQD Trigger: GTCCTGGGAGAGCAGCACTCAGGAAAGTCCTTCCTT...CCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | AAACAGGCCTTGCACCCTATCCGCTGTACTCCAAGTACAGCCTCGTGGCCAGAATCACTCCAGTACCCTTaGCAGCGGCTCTTAGCGTGC | + |
Preference number: 4 (lower is better) Translates to: KQALHPIRCTPSTASWPESLQYP*QRLLAC Trigger: GCACGCTAAGAGCCGCTGTCAAGGGTACTGGAGTGA...TTCTGGCCACGAGGCTGTACTTGGAGTACAGCGGATAGGGTGCAAGGCCTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | TCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGTCCTTTCCCCTAGACTaGGGAGGCCCTTCCTTTGCT | + |
Preference number: 4 (lower is better) Translates to: SGFWTHRKPPAQPVFDMGSFPLD*GGPSFA Trigger: AGCAAAGGAAGGGCCTCCGCAGTCTAGGGGAAAGGA...CCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CCTTATGTGGTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGACAGGTCTCCTGCAGTaGAGGGGGCAGTGGCCGCTG | + |
Preference number: 4 (lower is better) Translates to: PYVVGDPRFQRVAIIQSQTGLLQ*RGQWPL Trigger: CAGCGGCCACTGCCCCCTGCACTGCAGGAGACCTGT...CTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCACCACATAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCACAGCACAGGTCTCCTaGAGTGCAGGGGGCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: VGDPRFQRVAIIQSQKQATAQVS*SAGGSG Trigger: GCCACTGCCCCCTGCACTGCAGGAGACCTGTGCTGT...GGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GCCAGTATATACGTGGTCCCCTCTGAGTCCCTGATGTCCGCACCCTTCCTACTGCAACAGCAGACGTTCTaGCCTCACAGCACAGGTCTC | + |
Preference number: 4 (lower is better) Translates to: ASIYVVPSESLMSAPFLLQQQTF*PHSTGL Trigger: GAGACCTGTGCTGTGAGGGCAGAACGTCTGCTGTTG...CAGTAGGAAGGGTGCGGACATCAGGGACTCAGAGGGGACCACGTATATACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | AGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCAACAGCAGACGTTCTaGCCTCACAGCACAGGTCTC | + |
Preference number: 4 (lower is better) Translates to: SREASQAWPSGAVLETSHQQQTF*PHSTGL Trigger: GAGACCTGTGCTGTGAGGGCAGAACGTCTGCTGTTG...GTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CCTTATGTGGTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGGCCTTGGCTTCTGCCTaGAGCTCGGCTTCCAGGGCC | + |
Preference number: 4 (lower is better) Translates to: PYVVGDPRFQRVAIIQSQALASA*SSASRA Trigger: GGCCCTGGAAGCCGAGCTGCAGGCAGAAGCCAAGGC...CTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCACCACATAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGACGCCGCTGCTGCCATaGCTGCGCCCACCACACCCC | + |
Preference number: 4 (lower is better) Translates to: LLAPKSVMLGPIPTVKRMTPLLP*LRPPHP Trigger: GGGGTGTGGTGGGCGCAGGCATGGCAGCAGCGGCGT...CATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTGGCCCAGCTCCAGCTTaGGGAATGATGCATGGGACC | + |
Preference number: 4 (lower is better) Translates to: VSCTFPSHTLAEPGTDCFGPAPA*GMMHGT Trigger: GGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCC...AAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGGGGACAGATGGAGCAGGTaGGCGGCTCCCGGGTTGGGG | + |
Preference number: 4 (lower is better) Translates to: PSSKVSYAGTYPNCKTNGDRWSR*AAPGLG Trigger: CCCCAACCCGGGAGCCGCCCACCTGCTCCATCTGTC...CCCATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GCCAGTATATACGTGGTCCCCTCTGAGTCCCTGATGTCCGCACCCTTCCTACTGCACAGTCCAGCGAGATaGGCTCTCGAAGCCTTTCCA | + |
Preference number: 4 (lower is better) Translates to: ASIYVVPSESLMSAPFLLHSPAR*ALEAFP Trigger: TGGAAAGGCTTCGAGAGCCCATCTCGCTGGACTGTG...CAGTAGGAAGGGTGCGGACATCAGGGACTCAGAGGGGACCACGTATATACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | TCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCGGATGCAGAAGTCATaGCCACAGTCCAGCGAGATG | + |
Preference number: 4 (lower is better) Translates to: SGFWTHRKPPAQPVFDMGRMQKS*PQSSEM Trigger: CATCTCGCTGGACTGTGGCCATGACTTCTGCATCCG...CCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | ATCGGAGGTGTGGTTCTTTGGCATGTAATCTGTGTTGATCCATCCAAATGGGCTGGCGTCTGTCTCCCCTaGCCACGGCACGCCCCTCAC | + |
Preference number: 4 (lower is better) Translates to: IGGVVLWHVICVDPSKWAGVCLP*PRHAPH Trigger: GTGAGGGGCGTGCCGTGGCCAGGGGAGACAGACGCC...AGCCCATTTGGATGGATCAACACAGATTACATGCCAAAGAACCACACCTCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTAACAGGGCCACACCATaGCGGGCCAAGATGGCATCC | + |
Preference number: 4 (lower is better) Translates to: VSCTFPSHTLAEPGTDCFNRATP*RAKMAS Trigger: GGATGCCATCTTGGCCCGCCATGGTGTGGCCCTGTT...AAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CCTCCTTTTTCTTCCCTGTTAGCGGGGCTCCTAGCTCCAAAGTCAGTTATGCTGCCTACCGCGGCCAGGTaGCCACAGAAGCGCATTGTG | + |
Preference number: 4 (lower is better) Translates to: PPFSSLLAGLLAPKSVMLPTAAR*PQKRIV Trigger: CACAATGCGCTTCTGTGGCCACCTGGCCGCGGTAGG...CAGCATAACTGACTTTGGAGCTAGGAGCCCCGCTAACAGGGAAGAAAAAGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | AAACAGGCCTTGCACCCTATCCGCTGTACTCCAAGTACAGCCTCGTGGCCAGAAACAAAAAGCAGTGACTaGCAGGACGGGCCTCGGCAT | + |
Preference number: 4 (lower is better) Translates to: KQALHPIRCTPSTASWPETKSSD*QDGPRH Trigger: ATGCCGAGGCCCGTCCTGTCAGTCACTGCTTTTTGT...TTCTGGCCACGAGGCTGTACTTGGAGTACAGCGGATAGGGTGCAAGGCCTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | TCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGTGCTGCTGTTTCCCATaGAGCTTCGTTTGCTCTCCC | + |
Preference number: 4 (lower is better) Translates to: SGFWTHRKPPAQPVFDMGCCCFP*SFVCSP Trigger: GGGAGAGCAAACGAAGCTTCATGGGAAACAGCAGCA...CCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | AAACAGGCCTTGCACCCTATCCGCTGTACTCCAAGTACAGCCTCGTGGCCAGAAGGATGCGGTGTGTGCTaGAGCATCGGATGCAGAAGT | + |
Preference number: 4 (lower is better) Translates to: KQALHPIRCTPSTASWPEGCGVC*SIGCRS Trigger: ACTTCTGCATCCGATGCTTCAGCACACACCGCATCC...TTCTGGCCACGAGGCTGTACTTGGAGTACAGCGGATAGGGTGCAAGGCCTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | AGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTAAGGAAGGACTTTCCTaGGTGCTGCTCTCCCAGGAC | + |
Preference number: 4 (lower is better) Translates to: SSFPALSLPTLWQNLARTKEGLS*VLLSQD Trigger: GTCCTGGGAGAGCAGCACTCAGGAAAGTCCTTCCTT...AGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | CCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGGGCGGCTCTTAGCGTGCTaGGGGGCTGTGCTCAGCACG | + |
Preference number: 4 (lower is better) Translates to: PSSKVSYAGTYPNCKTNGRLLAC*GAVLST Trigger: CGTGCTGAGCACAGCCCCTCAGCACGCTAAGAGCCG...CCCATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGACGGCTCTTAGCGTGCTaGGGGGCTGTGCTCAGCACG | + |
Preference number: 4 (lower is better) Translates to: MLKDGARFLHFPFPHFGRRLLAC*GAVLST Trigger: CGTGCTGAGCACAGCCCCTCAGCACGCTAAGAGCCG...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | AGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTATAGCCTAGCTGCTGCCCTGTaGGCAGGCGTCTGTCTCCCC | + |
Preference number: 4 (lower is better) Translates to: SLAFWSSFGNKSPLQNYSLAAAL*AGVCLP Trigger: GGGGAGACAGACGCCTGCTCACAGGGCAGCAGCTAG...GCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | CCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGGGCTAGCTGCTGCCCTGTaGGCAGGCGTCTGTCTCCCC | + |
Preference number: 4 (lower is better) Translates to: PSSKVSYAGTYPNCKTNGLAAAL*AGVCLP Trigger: GGGGAGACAGACGCCTGCTCACAGGGCAGCAGCTAG...CCCATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | GCCAGTATATACGTGGTCCCCTCTGAGTCCCTGATGTCCGCACCCTTCCTACTGTTGTGTAGGAGTCCATaGAGGCCTTGGCTTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: ASIYVVPSESLMSAPFLLLCRSP*RPWLLP Trigger: AGGCAGAAGCCAAGGCCTTCATGGACTCCTACACAA...CAGTAGGAAGGGTGCGGACATCAGGGACTCAGAGGGGACCACGTATATACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | TTTTCTTCCCTGTTAGCGGGGCTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTGCCCATCCAGCCTTGTaGTTCCTCCCTGGGGAGAAC | + |
Preference number: 4 (lower is better) Translates to: FSSLLAGLLAPKSVMLGPAHPAL*FLPGEN Trigger: GTTCTCCCCAGGGAGGAAGCACAAGGCTGGATGGGC...AGGTCCCAGCATAACTGACTTTGGAGCTAGGAGCCCCGCTAACAGGGAAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS-3UTR GCA 90 bp | AAACAGGCCTTGCACCCTATCCGCTGTACTCCAAGTACAGCCTCGTGGCCAGAATCCTTTCCCCTAGACTaGGGAGGCCCTTCCTTTGCT | + |
Preference number: 4 (lower is better) Translates to: KQALHPIRCTPSTASWPESFPLD*GGPSFA Trigger: AGCAAAGGAAGGGCCTCCGCAGTCTAGGGGAAAGGA...TTCTGGCCACGAGGCTGTACTTGGAGTACAGCGGATAGGGTGCAAGGCCTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | ACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCAACAGCAGACGTTCTaGCCTCACAGCACAGGTCTC | + |
Preference number: 4 (lower is better) Translates to: THRKPPAQPVFDMGHSTRQQQTF*PHSTGL Trigger: GAGACCTGTGCTGTGAGGGCAGAACGTCTGCTGTTG...CCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | TTTTCTTCCCTGTTAGCGGGGCTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTGAAGGCCTTGGCTTCTaGCTGCAGCTCGGCTTCCAG | + |
Preference number: 4 (lower is better) Translates to: FSSLLAGLLAPKSVMLGPEGLGF*LQLGFQ Trigger: CTGGAAGCCGAGCTGCAGGCAGAAGCCAAGGCCTTC...AGGTCCCAGCATAACTGACTTTGGAGCTAGGAGCCCCGCTAACAGGGAAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | ATCGGAGGTGTGGTTCTTTGGCATGTAATCTGTGTTGATCCATCCAAATGGGCTCACCGCGGCCCCAGCTaGTACCATCCCAGCCTCAGC | + |
Preference number: 4 (lower is better) Translates to: IGGVVLWHVICVDPSKWAHRGPS*YHPSLS Trigger: GCTGAGGCTGGGATGGTAGCAGCTGGGGCCGCGGTG...AGCCCATTTGGATGGATCAACACAGATTACATGCCAAAGAACCACACCTCCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | TCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGCGGATGCAGAAGTCATaGCCACAGTCCAGCGAGATG | + |
Preference number: 4 (lower is better) Translates to: SSGFWTHRKPPAQPVFDMRMQKS*PQSSEM Trigger: CATCTCGCTGGACTGTGGCCATGACTTCTGCATCCG...CATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | TCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGCTCCTTGCTCAGTTCTaGGCTCATGACATCCCCCGT | + |
Preference number: 4 (lower is better) Translates to: SSGFWTHRKPPAQPVFDMLLAQF*AHDIPR Trigger: ACGGGGGATGTCATGAGCCCAGAACTGAGCAAGGAG...CATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GCCTCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACAAGATGGCATCCTTCTaGGTAGAGAGGAGGTTCCTC | + |
Preference number: 4 (lower is better) Translates to: ASSGFWTHRKPPAQPVFDKMASF*VERRFL Trigger: GAGGAACCTCCTCTCTACCCAGAAGGATGCCATCTT...GTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | TCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCCATCCCATAATGTTTaGCCATCACCTCAGCCACGT | + |
Preference number: 4 (lower is better) Translates to: SGFWTHRKPPAQPVFDMGPSHNV*PSPQPR Trigger: ACGTGGCTGAGGTGATGGGCAAACATTATGGGATGG...CCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACCATCCCATAATGTTTaGCCATCACCTCAGCCACGT | + |
Preference number: 4 (lower is better) Translates to: QGGQPSLAFWSSFGNKSPPSHNV*PSPQPR Trigger: ACGTGGCTGAGGTGATGGGCAAACATTATGGGATGG...TGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | AGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTAGTCATCTTCTGTGTTaGCTCTGGGGCTGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: SSFPALSLPTLWQNLARTSHLLC*LWGWLG Trigger: ACCAAGCCAGCCCCAGAGGCAACACAGAAGATGACT...AGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCTTGCACCCTATCCGCGTGCTGAGGGGCTGTaGTCAGCACGTCCAAGATGT | + |
Preference number: 4 (lower is better) Translates to: VPESSNYPEPETGLAPYPRAEGL*SARPRC Trigger: ACATCTTGGACGTGCTGAGCACAGCCCCTCAGCACG...CGGATAGGGTGCAAGGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCCAGTATATACGTGGTTCCTGTGCTAGCTGCTaGCCTGTGAGCAGGCGTCTG | + |
Preference number: 4 (lower is better) Translates to: QLSQCLTWGIQQGQYIRGSCASC*PVSRRL Trigger: CAGACGCCTGCTCACAGGGCAGCAGCTAGCACAGGA...ACCACGTATATACTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | ACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGTCTGCTCTCTCTCCTTaGACAACAGGGCCACACCAT | + |
Preference number: 4 (lower is better) Translates to: THRKPPAQPVFDMGHSTRSALSP*TTGPHH Trigger: ATGGTGTGGCCCTGTTGTGCAAGGAGAGAGAGCAGA...CCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | TCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTAGCACAGAATGCAATCGGCTTGTGCTTCCTCCCTaGGGAGAACCCAACTGTTGC | + |
Preference number: 4 (lower is better) Translates to: SHTLAEPGTDCFSTECNRLVLPP*GEPNCC Trigger: GCAACAGTTGGGTTCTCCCCAGGGAGGAAGCACAAG...CCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS-3UTR CCA 90 bp | CCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAACTTGTGCTTCCTCCCTaGGGAGAACCCAACTGTTGC | + |
Preference number: 4 (lower is better) Translates to: PAKPGLLEQFWKQVTTPELVLPP*GEPNCC Trigger: GCAACAGTTGGGTTCTCCCCAGGGAGGAAGCACAAG...TTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS-3UTR CCA 90 bp | GCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTATAGCTCCTCCCTGCACAGCCTaGCCCATCCAGCCTTGTGCT | + |
Preference number: 4 (lower is better) Translates to: AWPSGAVLETSHHSRIIAPPCTA*PIQPCA Trigger: AGCACAAGGCTGGATGGGCCAGGCTGTGCAGGGAGG...AGCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS-3UTR CCA 90 bp | AAACAGGCCTTGCACCCTATCCGCTGTACTCCAAGTACAGCCTCGTGGCCAGAATTGGGGAATGATGCATaGGACCTGCTTGTCCTGGTC | + |
Preference number: 4 (lower is better) Translates to: KQALHPIRCTPSTASWPELGNDA*DLLVLV Trigger: GACCAGGACAAGCAGGTCCCATGCATCATTCCCCAA...TTCTGGCCACGAGGCTGTACTTGGAGTACAGCGGATAGGGTGCAAGGCCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS-3UTR CCA 90 bp | CCTTATGTGGTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGGGCCCAGCTCCAGCTTaGGGAATGATGCATGGGACC | + |
Preference number: 4 (lower is better) Translates to: PYVVGDPRFQRVAIIQSQGPAPA*GMMHGT Trigger: GGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCC...CTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCACCACATAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAGCCTTTCCAGACAGATaGAGCAGGTGGGCGGCTCCC | + |
Preference number: 4 (lower is better) Translates to: MLKDGARFLHFPFPHFGRAFPDR*SRWAAP Trigger: GGGAGCCGCCCACCTGCTCCATCTGTCTGGAAAGGC...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GCCTCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACGTATCCTTCAGCTCTTaGGAGGTATTCAGGATCTGG | + |
Preference number: 4 (lower is better) Translates to: ASSGFWTHRKPPAQPVFDVSFSS*EVFRIW Trigger: CCAGATCCTGAATACCTCCCAAGAGCTGAAGGATAC...GTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCTTGCACCCTATCCGGCAGCTCCTGGACCTTaGGGTATTTGCCGGACAGCT | + |
Preference number: 4 (lower is better) Translates to: VPESSNYPEPETGLAPYPAAPGP*GICRTA Trigger: AGCTGTCCGGCAAATACCCCAAGGTCCAGGAGCTGC...CGGATAGGGTGCAAGGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | TCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTAGCACAGAATGCAATCGGTTGTGTAGGAGTCCATaGAGGCCTTGGCTTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: SHTLAEPGTDCFSTECNRLCRSP*RPWLLP Trigger: AGGCAGAAGCCAAGGCCTTCATGGACTCCTACACAA...CCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | CCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTGTGTAGGAGTCCATaGAGGCCTTGGCTTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: PAKPGLLEQFWKQVTTPELCRSP*RPWLLP Trigger: AGGCAGAAGCCAAGGCCTTCATGGACTCCTACACAA...TTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GCCAGTATATACGTGGTCCCCTCTGAGTCCCTGATGTCCGCACCCTTCCTACTGGTTTGCTCTCCCGTTTaGCAAGCCGATGACAAAAAG | + |
Preference number: 4 (lower is better) Translates to: ASIYVVPSESLMSAPFLLVCSPV*QADDKK Trigger: CTTTTTGTCATCGGCTTGGCAAACGGGAGAGCAAAC...CAGTAGGAAGGGTGCGGACATCAGGGACTCAGAGGGGACCACGTATATACTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | TTTTCTTCCCTGTTAGCGGGGCTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTTCCTTTCCCCTAGACTaGGGAGGCCCTTCCTTTGCT | + |
Preference number: 4 (lower is better) Translates to: FSSLLAGLLAPKSVMLGPSFPLD*GGPSFA Trigger: AGCAAAGGAAGGGCCTCCGCAGTCTAGGGGAAAGGA...AGGTCCCAGCATAACTGACTTTGGAGCTAGGAGCCCCGCTAACAGGGAAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCAAGGACTTTCCTGAGTaGTGCTCTCCCAGGACAGCC | + |
Preference number: 4 (lower is better) Translates to: VGDPRFQRVAIIQSQKQAKDFPE*CSPRTA Trigger: GGCTGTCCTGGGAGAGCAGCACTCAGGAAAGTCCTT...GGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAAAGTCATCTTCTGTGTTaGCTCTGGGGCTGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: PAKPGLLEQFWKQVTTPESHLLC*LWGWLG Trigger: ACCAAGCCAGCCCCAGAGGCAACACAGAAGATGACT...TTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGGGTCCTGTGCTAGCTGCTaGCCTGTGAGCAGGCGTCTG | + |
Preference number: 4 (lower is better) Translates to: PSSKVSYAGTYPNCKTNGSCASC*PVSRRL Trigger: CAGACGCCTGCTCACAGGGCAGCAGCTAGCACAGGA...CCCATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGATCCTGTGCTAGCTGCTaGCCTGTGAGCAGGCGTCTG | + |
Preference number: 4 (lower is better) Translates to: MLKDGARFLHFPFPHFGRSCASC*PVSRRL Trigger: CAGACGCCTGCTCACAGGGCAGCAGCTAGCACAGGA...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | AGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTGTAGTGCAGAGAAGATaGGCTTGGTGGCTATGTCCT | + |
Preference number: 4 (lower is better) Translates to: SSFPALSLPTLWQNLARTVVQRR*AWWLCP Trigger: AGGACATAGCCACCAAGCGCATCTTCTCTGCACTAC...AGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | TCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGTAGTGCAGAGAAGATaGGCTTGGTGGCTATGTCCT | + |
Preference number: 4 (lower is better) Translates to: SSGFWTHRKPPAQPVFDMVVQRR*AWWLCP Trigger: AGGACATAGCCACCAAGCGCATCTTCTCTGCACTAC...CATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCTTGCACCCTATCCGAGGGCCTCCAAGGTCTaGTCTCTCTCCTTGCACAAC | + |
Preference number: 4 (lower is better) Translates to: VPESSNYPEPETGLAPYPRASKV*SLSLHN Trigger: GTTGTGCAAGGAGAGAGAGCAGACCTTGGAGGCCCT...CGGATAGGGTGCAAGGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAGGCCCAGCTCCAGCTTaGGGAATGATGCATGGGACC | + |
Preference number: 4 (lower is better) Translates to: MLKDGARFLHFPFPHFGRGPAPA*GMMHGT Trigger: GGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCC...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | TTTTCTTCCCTGTTAGCGGGGCTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTTGTGTCCCTGGCCAGTaGATGCTTCAGGCAACGGTT | + |
Preference number: 4 (lower is better) Translates to: FSSLLAGLLAPKSVMLGPCVPGQ*MLQATV Trigger: AACCGTTGCCTGAAGCATCCACTGGCCAGGGACACA...AGGTCCCAGCATAACTGACTTTGGAGCTAGGAGCCCCGCTAACAGGGAAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCCAGTATTGTGTCCCTGGCCAGTaGATGCTTCAGGCAACGGTT | + |
Preference number: 4 (lower is better) Translates to: VNPQLSQCLTWGIQQGQYCVPGQ*MLQATV Trigger: AACCGTTGCCTGAAGCATCCACTGGCCAGGGACACA...ATACTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCCTCCTTGCTCAGTTCTaGGCTCATGACATCCCCCGT | + |
Preference number: 4 (lower is better) Translates to: VGDPRFQRVAIIQSQKQALLAQF*AHDIPR Trigger: ACGGGGGATGTCATGAGCCCAGAACTGAGCAAGGAG...GGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR CAA 72 bp | TCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTaGACATGGGGCATTCAACAAGGCCAGTATATACGT | + |
Preference number: 4 (lower is better) Translates to: SGPTVNPQLSQC*TWGIQQGQYIR Trigger: ACGTATATACTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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3UTR CAA 72 bp | AGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTaGGAAACAAGTCACCACTCCAGAATTATAGCTCTG | + |
Preference number: 4 (lower is better) Translates to: REASQAWPSGAV*ETSHHSRIIAL Trigger: CAGAGCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | CCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAAAGCCAGAGAGATTCTTaGTCTCCTGTGCTAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: PAKPGLLEQFWKQVTTPESQRDS*SPVLAA Trigger: AGCAGCTAGCACAGGAGATCAAGAATCTCTCTGGCT...TTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCAACTAAGAGATCCAGATaGTGGAAGAGAAAGGGTCCT | + |
Preference number: 4 (lower is better) Translates to: QGGQPSLAFWSSFGNKSPTKRSR*WKRKGP Trigger: AGGACCCTTTCTCTTCCAGCATCTGGATCTCTTAGT...TGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060255.14 |
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CDS-3UTR GCA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGACGTGCTGAGGGGCTGTaGTCAGCACGTCCAAGATGT | + |
Preference number: 4 (lower is better) Translates to: MLKDGARFLHFPFPHFGRRAEGL*SARPRC Trigger: ACATCTTGGACGTGCTGAGCACAGCCCCTCAGCACG...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | TTTTCTTCCCTGTTAGCGGGGCTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTTCTGCTCTCTCTCCTTaGACAACAGGGCCACACCAT | + |
Preference number: 4 (lower is better) Translates to: FSSLLAGLLAPKSVMLGPSALSP*TTGPHH Trigger: ATGGTGTGGCCCTGTTGTGCAAGGAGAGAGAGCAGA...AGGTCCCAGCATAACTGACTTTGGAGCTAGGAGCCCCGCTAACAGGGAAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CCTTATGTGGTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGCACAGTCCAGCGAGATaGGCTCTCGAAGCCTTTCCA | + |
Preference number: 4 (lower is better) Translates to: PYVVGDPRFQRVAIIQSQHSPAR*ALEAFP Trigger: TGGAAAGGCTTCGAGAGCCCATCTCGCTGGACTGTG...CTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCACCACATAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | TCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGAAGCCACTGAGCAAGTaGTCCAAAAGGAAGGACTTT | + |
Preference number: 4 (lower is better) Translates to: SGFWTHRKPPAQPVFDMGKPLSK*SKRKDF Trigger: AAAGTCCTTCCTTTTGGACCACTTGCTCAGTGGCTT...CCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | TCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGAAGAGATCCAGATGCTaGAAGAGAAAGGGTCCTGAC | + |
Preference number: 4 (lower is better) Translates to: SSGFWTHRKPPAQPVFDMKRSRC*KRKGPD Trigger: GTCAGGACCCTTTCTCTTCCAGCATCTGGATCTCTT...CATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060255.14 |
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CDS-3UTR CCA 90 bp | CTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGCCGAGGAGCAGCTCCTaGACCTTGGGGTATTTGCCG | + |
Preference number: 4 (lower is better) Translates to: LLAPKSVMLGPIPTVKRMPRSSS*TLGYLP Trigger: CGGCAAATACCCCAAGGTCCAGGAGCTGCTCCTCGG...CATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CCTCCTTTTTCTTCCCTGTTAGCGGGGCTCCTAGCTCCAAAGTCAGTTATGCTGCCTCGAACTCCTTCTTaGCGGCTTCCACTTTCCTCA | + |
Preference number: 4 (lower is better) Translates to: PPFSSLLAGLLAPKSVMLPRTPS*RLPLSS Trigger: TGAGGAAAGTGGAAGCCGCCAAGAAGGAGTTCGAGG...CAGCATAACTGACTTTGGAGCTAGGAGCCCCGCTAACAGGGAAGAAAAAGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAAAGAAGATGCGCTTGGTaGCTATGTCCTGCTGTCTCA | + |
Preference number: 4 (lower is better) Translates to: PAKPGLLEQFWKQVTTPERRCAW*LCPAVS Trigger: TGAGACAGCAGGACATAGCCACCAAGCGCATCTTCT...TTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | TCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTAGCACAGAATGCAATCGGAGAAGATGCGCTTGGTaGCTATGTCCTGCTGTCTCA | + |
Preference number: 4 (lower is better) Translates to: SHTLAEPGTDCFSTECNRRRCAW*LCPAVS Trigger: TGAGACAGCAGGACATAGCCACCAAGCGCATCTTCT...CCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGAACAGGGCCACACCATaGCGGGCCAAGATGGCATCC | + |
Preference number: 4 (lower is better) Translates to: LLAPKSVMLGPIPTVKRMNRATP*RAKMAS Trigger: GGATGCCATCTTGGCCCGCCATGGTGTGGCCCTGTT...CATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | AGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTATAGCAAGGAAGGACTTTCCTaGGTGCTGCTCTCCCAGGAC | + |
Preference number: 4 (lower is better) Translates to: SLAFWSSFGNKSPLQNYSKEGLS*VLLSQD Trigger: GTCCTGGGAGAGCAGCACTCAGGAAAGTCCTTCCTT...GCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAAGTTTGCTCTCCCGTTTaGCAAGCCGATGACAAAAAG | + |
Preference number: 4 (lower is better) Translates to: PAKPGLLEQFWKQVTTPEVCSPV*QADDKK Trigger: CTTTTTGTCATCGGCTTGGCAAACGGGAGAGCAAAC...TTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | GTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCTTGCACCCTATCCGCCATCCCATAATGTTTaGCCATCACCTCAGCCACGT | + |
Preference number: 4 (lower is better) Translates to: VPESSNYPEPETGLAPYPPSHNV*PSPQPR Trigger: ACGTGGCTGAGGTGATGGGCAAACATTATGGGATGG...CGGATAGGGTGCAAGGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCCAGTATATACGTGGTTCTTTGTTTACCCACTaGCTCTCAGGAGCAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: QLSQCLTWGIQQGQYIRGSLFTH*LSGAGR Trigger: CCTCCCTGCTCCTGAGAGGCAGTGGGTAAACAAAGA...ACCACGTATATACTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | ATCGGAGGTGTGGTTCTTTGGCATGTAATCTGTGTTGATCCATCCAAATGGGCTCGTGCTGAGGGGCTGTaGTCAGCACGTCCAAGATGT | + |
Preference number: 4 (lower is better) Translates to: IGGVVLWHVICVDPSKWARAEGL*SARPRC Trigger: ACATCTTGGACGTGCTGAGCACAGCCCCTCAGCACG...AGCCCATTTGGATGGATCAACACAGATTACATGCCAAAGAACCACACCTCCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGGGAGGGCCTCCAAGGTCTaGTCTCTCTCCTTGCACAAC | + |
Preference number: 4 (lower is better) Translates to: PSSKVSYAGTYPNCKTNGRASKV*SLSLHN Trigger: GTTGTGCAAGGAGAGAGAGCAGACCTTGGAGGCCCT...CCCATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGGGCGGATGCAGAAGTCATaGCCACAGTCCAGCGAGATG | + |
Preference number: 4 (lower is better) Translates to: PSSKVSYAGTYPNCKTNGRMQKS*PQSSEM Trigger: CATCTCGCTGGACTGTGGCCATGACTTCTGCATCCG...CCCATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | TCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTAGCACAGAATGCAATCGGGTATCCTTCAGCTCTTaGGAGGTATTCAGGATCTGG | + |
Preference number: 4 (lower is better) Translates to: SHTLAEPGTDCFSTECNRVSFSS*EVFRIW Trigger: CCAGATCCTGAATACCTCCCAAGAGCTGAAGGATAC...CCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CCTTATGTGGTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGTGTTGCCTCTGGGGCTaGCTTGGTCTTTGTTTACCC | + |
Preference number: 4 (lower is better) Translates to: PYVVGDPRFQRVAIIQSQCCLWG*LGLCLP Trigger: GGGTAAACAAAGACCAAGCCAGCCCCAGAGGCAACA...CTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCACCACATAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CCTTATGTGGTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGCCTCGAACTCCTTCTTaGCGGCTTCCACTTTCCTCA | + |
Preference number: 4 (lower is better) Translates to: PYVVGDPRFQRVAIIQSQPRTPS*RLPLSS Trigger: TGAGGAAAGTGGAAGCCGCCAAGAAGGAGTTCGAGG...CTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCACCACATAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCCAGTATAGAAGATGCGCTTGGTaGCTATGTCCTGCTGTCTCA | + |
Preference number: 4 (lower is better) Translates to: VNPQLSQCLTWGIQQGQYRRCAW*LCPAVS Trigger: TGAGACAGCAGGACATAGCCACCAAGCGCATCTTCT...ATACTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | AGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTATAGCTGCTGCTGTTTCCCATaGAGCTTCGTTTGCTCTCCC | + |
Preference number: 4 (lower is better) Translates to: SLAFWSSFGNKSPLQNYSCCCFP*SFVCSP Trigger: GGGAGAGCAAACGAAGCTTCATGGGAAACAGCAGCA...GCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | CCTTATGTGGTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGAGCCAGAGAGATTCTTaGTCTCCTGTGCTAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: PYVVGDPRFQRVAIIQSQSQRDS*SPVLAA Trigger: AGCAGCTAGCACAGGAGATCAAGAATCTCTCTGGCT...CTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCACCACATAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | ATCGGAGGTGTGGTTCTTTGGCATGTAATCTGTGTTGATCCATCCAAATGGGCTAAGGACTTTCCTGAGTaGTGCTCTCCCAGGACAGCC | + |
Preference number: 4 (lower is better) Translates to: IGGVVLWHVICVDPSKWAKDFPE*CSPRTA Trigger: GGCTGTCCTGGGAGAGCAGCACTCAGGAAAGTCCTT...AGCCCATTTGGATGGATCAACACAGATTACATGCCAAAGAACCACACCTCCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | AGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTATAGCTCTTTGTTTACCCACTaGCTCTCAGGAGCAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: SLAFWSSFGNKSPLQNYSSLFTH*LSGAGR Trigger: CCTCCCTGCTCCTGAGAGGCAGTGGGTAAACAAAGA...GCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAAGTCATCTTCTGTGTTaGCTCTGGGGCTGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: MLKDGARFLHFPFPHFGRSHLLC*LWGWLG Trigger: ACCAAGCCAGCCCCAGAGGCAACACAGAAGATGACT...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGAGGGCCTCCAAGGTCTaGTCTCTCTCCTTGCACAAC | + |
Preference number: 4 (lower is better) Translates to: LLAPKSVMLGPIPTVKRMRASKV*SLSLHN Trigger: GTTGTGCAAGGAGAGAGAGCAGACCTTGGAGGCCCT...CATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | ATCGGAGGTGTGGTTCTTTGGCATGTAATCTGTGTTGATCCATCCAAATGGGCTTGTGTCCCTGGCCAGTaGATGCTTCAGGCAACGGTT | + |
Preference number: 4 (lower is better) Translates to: IGGVVLWHVICVDPSKWACVPGQ*MLQATV Trigger: AACCGTTGCCTGAAGCATCCACTGGCCAGGGACACA...AGCCCATTTGGATGGATCAACACAGATTACATGCCAAAGAACCACACCTCCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | AGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTATAGCTGTTGCCTCTGGGGCTaGCTTGGTCTTTGTTTACCC | + |
Preference number: 4 (lower is better) Translates to: SLAFWSSFGNKSPLQNYSCCLWG*LGLCLP Trigger: GGGTAAACAAAGACCAAGCCAGCCCCAGAGGCAACA...GCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | CCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGGGCGTTTGCCAAGCCGATaGCAAAAAGCAGTGACTGAC | + |
Preference number: 4 (lower is better) Translates to: PSSKVSYAGTYPNCKTNGRLPSR*QKAVTD Trigger: GTCAGTCACTGCTTTTTGTCATCGGCTTGGCAAACG...CCCATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR TCA 90 bp | ATCGGAGGTGTGGTTCTTTGGCATGTAATCTGTGTTGATCCATCCAAATGGGCTTGCTGCTGTTTCCCATaGAGCTTCGTTTGCTCTCCC | + |
Preference number: 4 (lower is better) Translates to: IGGVVLWHVICVDPSKWACCCFP*SFVCSP Trigger: GGGAGAGCAAACGAAGCTTCATGGGAAACAGCAGCA...AGCCCATTTGGATGGATCAACACAGATTACATGCCAAAGAACCACACCTCCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | ATCGGAGGTGTGGTTCTTTGGCATGTAATCTGTGTTGATCCATCCAAATGGGCTTCTTTGTTTACCCACTaGCTCTCAGGAGCAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: IGGVVLWHVICVDPSKWASLFTH*LSGAGR Trigger: CCTCCCTGCTCCTGAGAGGCAGTGGGTAAACAAAGA...AGCCCATTTGGATGGATCAACACAGATTACATGCCAAAGAACCACACCTCCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | CTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGTCTGCTCTCTCTCCTTaGACAACAGGGCCACACCAT | + |
Preference number: 4 (lower is better) Translates to: LLAPKSVMLGPIPTVKRMSALSP*TTGPHH Trigger: ATGGTGTGGCCCTGTTGTGCAAGGAGAGAGAGCAGA...CATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAAAGATGGCATCCTTCTaGGTAGAGAGGAGGTTCCTC | + |
Preference number: 4 (lower is better) Translates to: MLKDGARFLHFPFPHFGRKMASF*VERRFL Trigger: GAGGAACCTCCTCTCTACCCAGAAGGATGCCATCTT...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGGGAAGATGGCATCCTTCTaGGTAGAGAGGAGGTTCCTC | + |
Preference number: 4 (lower is better) Translates to: PSSKVSYAGTYPNCKTNGKMASF*VERRFL Trigger: GAGGAACCTCCTCTCTACCCAGAAGGATGCCATCTT...CCCATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | ACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGATCCAGATGCTGGATTaGTACCATCCCATAATGTTT | + |
Preference number: 4 (lower is better) Translates to: THRKPPAQPVFDMGHSTRIQMLD*YHPIMF Trigger: AAACATTATGGGATGGTACCAATCCAGCATCTGGAT...CCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAGTTTGCTCTCCCGTTTaGCAAGCCGATGACAAAAAG | + |
Preference number: 4 (lower is better) Translates to: MLKDGARFLHFPFPHFGRVCSPV*QADDKK Trigger: CTTTTTGTCATCGGCTTGGCAAACGGGAGAGCAAAC...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR GCA 90 bp | ATCGGAGGTGTGGTTCTTTGGCATGTAATCTGTGTTGATCCATCCAAATGGGCTGTAGTGCAGAGAAGATaGGCTTGGTGGCTATGTCCT | + |
Preference number: 4 (lower is better) Translates to: IGGVVLWHVICVDPSKWAVVQRR*AWWLCP Trigger: AGGACATAGCCACCAAGCGCATCTTCTCTGCACTAC...AGCCCATTTGGATGGATCAACACAGATTACATGCCAAAGAACCACACCTCCGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCCAGTATATACGTGGTAAGCCACTGAGCAAGTaGTCCAAAAGGAAGGACTTT | + |
Preference number: 4 (lower is better) Translates to: QLSQCLTWGIQQGQYIRGKPLSK*SKRKDF Trigger: AAAGTCCTTCCTTTTGGACCACTTGCTCAGTGGCTT...ACCACGTATATACTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTATAGCTGTATCCTTCAGCTCTTaGGAGGTATTCAGGATCTGG | + |
Preference number: 4 (lower is better) Translates to: AWPSGAVLETSHHSRIIAVSFSS*EVFRIW Trigger: CCAGATCCTGAATACCTCCCAAGAGCTGAAGGATAC...AGCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | GTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTTTGTCTTACCTGGATTaGTACCATCCCATAATGTTT | + |
Preference number: 4 (lower is better) Translates to: VSCTFPSHTLAEPGTDCFLSYLD*YHPIMF Trigger: AAACATTATGGGATGGTACCAATCCAGGTAAGACAA...AAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060255.14 |
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CDS-3UTR CCA 90 bp | ATCGGAGGTGTGGTTCTTTGGCATGTAATCTGTGTTGATCCATCCAAATGGGCTAAGCCACTGAGCAAGTaGTCCAAAAGGAAGGACTTT | + |
Preference number: 4 (lower is better) Translates to: IGGVVLWHVICVDPSKWAKPLSK*SKRKDF Trigger: AAAGTCCTTCCTTTTGGACCACTTGCTCAGTGGCTT...AGCCCATTTGGATGGATCAACACAGATTACATGCCAAAGAACCACACCTCCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CCA 90 bp | CCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGGGATCCAGATGCTGGATTaGTACCATCCCATAATGTTT | + |
Preference number: 4 (lower is better) Translates to: PSSKVSYAGTYPNCKTNGIQMLD*YHPIMF Trigger: AAACATTATGGGATGGTACCAATCCAGCATCTGGAT...CCCATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000102661.4 |
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CDS GCA 90 bp | AGCAGCCAACGCCGCTGCTGCCATGCCTGCGCCCACCACACCCCCTaGCAGGCCCATGAGCCCAGCACCTACAGCGCCCCCTACCGCGGC | + |
Preference number: 5 (lower is better) Translates to: SSQRRCCHACAHHTP*QAHEPSTYSAPYRG Trigger: GCCGCGGTAGGGGGCGCTGTAGGTGCTGGGCTCATGGGCCTGGCAGGGGGTGTGGTGGGCGCAGGCATGGCAGCAGCGGCGTTGGCTGCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 90 bp | CCAGCGAGATGGGCTCTCGAAGCCTTTCCAGACAGATGGAGCAGGTaGGCGGCTCCCGGGTTGGGGAGGGACGGTGTCCCAGGCCCAGCT | + |
Preference number: 5 (lower is better) Translates to: PARWALEAFPDRWSR*AAPGLGRDGVPGPA Trigger: AGCTGGGCCTGGGACACCGTCCCTCCCCAACCCGGGAGCCGCCCACCTGCTCCATCTGTCTGGAAAGGCTTCGAGAGCCCATCTCGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 90 bp | GCTCCCGGGTTGGGGAGGGACGGTGTCCCAGGCCCAGCTCCAGCTTaGGGAATGATGCATGGGACCTGCTTGTCCTGGTCCCTCCCTGCA | + |
Preference number: 5 (lower is better) Translates to: APGLGRDGVPGPAPA*GMMHGTCLSWSLPA Trigger: TGCAGGGAGGGACCAGGACAAGCAGGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCCTGGGACACCGTCCCTCCCCAACCCGGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS TCA 90 bp | GGTTGGGGAGGGACGGTGTCCCAGGCCCAGCTCCAGCTTGGGGAATaGTGCATGGGACCTGCTTGTCCTGGTCCCTCCCTGCACAGCCTG | + |
Preference number: 5 (lower is better) Translates to: GWGGTVSQAQLQLGE*CMGPACPGPSLHSL Trigger: CAGGCTGTGCAGGGAGGGACCAGGACAAGCAGGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCCTGGGACACCGTCCCTCCCCAACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS CCA 90 bp | GAGGGACGGTGTCCCAGGCCCAGCTCCAGCTTGGGGAATGATGCATaGGACCTGCTTGTCCTGGTCCCTCCCTGCACAGCCTGGCCCATC | + |
Preference number: 5 (lower is better) Translates to: EGRCPRPSSSLGNDA*DLLVLVPPCTAWPI Trigger: GATGGGCCAGGCTGTGCAGGGAGGGACCAGGACAAGCAGGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCCTGGGACACCGTCCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS GCA 90 bp | GGTGTCCCAGGCCCAGCTCCAGCTTGGGGAATGATGCATGGGACCTaGTTGTCCTGGTCCCTCCCTGCACAGCCTGGCCCATCCAGCCTT | + |
Preference number: 5 (lower is better) Translates to: GVPGPAPAWGMMHGT*LSWSLPAQPGPSSL Trigger: AAGGCTGGATGGGCCAGGCTGTGCAGGGAGGGACCAGGACAAGCAGGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCCTGGGACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS GCA 90 bp | AGCGGGCCCGTTTCCCGAGGAGCAGCTCCTGGACCTTGGGGTATTTaGCGGACAGCTTCTGGAGTATGTCACCCACGTGCCCTTGCCCTG | + |
Preference number: 5 (lower is better) Translates to: SGPVSRGAAPGPWGI*RTASGVCHPRALAL Trigger: CAGGGCAAGGGCACGTGGGTGACATACTCCAGAAGCTGTCCGGCAAATACCCCAAGGTCCAGGAGCTGCTCCTCGGGAAACGGGCCCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 90 bp | TTCCCCATCCAGCCAGAGAGATTCTTGATCTCCTGTGCTAGCTGCTaGCCTGTGAGCAGGCGTCTGTCTCCCCTGGCCACGGCACGCCCC | + |
Preference number: 5 (lower is better) Translates to: FPIQPERFLISCASC*PVSRRLSPLATARP Trigger: GGGGCGTGCCGTGGCCAGGGGAGACAGACGCCTGCTCACAGGGCAGCAGCTAGCACAGGAGATCAAGAATCTCTCTGGCTGGATGGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | ACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGTGGGCGGCTCCCGGGTaGGGGAGGGACGGTGTCCCA | + |
Preference number: 5 (lower is better) Translates to: THRKPPAQPVFDMGHSTRWAAPG*GRDGVP Trigger: TGGGACACCGTCCCTCCCCAACCCGGGAGCCGCCCA...CCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 90 bp | AGCTTGGGGAATGATGCATGGGACCTGCTTGTCCTGGTCCCTCCCTaGACAGCCTGGCCCATCCAGCCTTGTGCTTCCTCCCTGGGGAGA | + |
Preference number: 5 (lower is better) Translates to: SLGNDAWDLLVLVPP*TAWPIQPCASSLGR Trigger: TCTCCCCAGGGAGGAAGCACAAGGCTGGATGGGCCAGGCTGTGCAGGGAGGGACCAGGACAAGCAGGTCCCATGCATCATTCCCCAAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS GCA 90 bp | GATGAGGCCTCCGGAGGCATTGATTCGTACCAACAGCAGACGTTCTaGCCTCACAGCACAGGTCTCCTGCAGTGCAGGGGGCAGTGGCCG | + |
Preference number: 5 (lower is better) Translates to: DEASGGIDSYQQQTF*PHSTGLLQCRGQWP Trigger: CGGCCACTGCCCCCTGCACTGCAGGAGACCTGTGCTGTGAGGGCAGAACGTCTGCTGTTGGTACGAATCAATGCCTCCGGAGGCCTCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 90 bp | GTCTTCCCCATCCAGCCAGAGAGATTCTTGATCTCCTGTGCTAGCTaGTGCCCTGTGAGCAGGCGTCTGTCTCCCCTGGCCACGGCACGC | + |
Preference number: 5 (lower is better) Translates to: VFPIQPERFLISCAS*CPVSRRLSPLATAR Trigger: GCGTGCCGTGGCCAGGGGAGACAGACGCCTGCTCACAGGGCAGCAGCTAGCACAGGAGATCAAGAATCTCTCTGGCTGGATGGGGAAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 90 bp | GGAGGTAACAGCGGGCCCGTTTCCCGAGGAGCAGCTCCTGGACCTTaGGGTATTTGCCGGACAGCTTCTGGAGTATGTCACCCACGTGCC | + |
Preference number: 5 (lower is better) Translates to: GGNSGPVSRGAAPGP*GICRTASGVCHPRA Trigger: GGCACGTGGGTGACATACTCCAGAAGCTGTCCGGCAAATACCCCAAGGTCCAGGAGCTGCTCCTCGGGAAACGGGCCCGCTGTTACCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 90 bp | GCTTGTCCTGGTCCCTCCCTGCACAGCCTGGCCCATCCAGCCTTGTaGTTCCTCCCTGGGGAGAACCCAACTGTTGCTGCTGTTTCCCAT | + |
Preference number: 5 (lower is better) Translates to: ACPGPSLHSLAHPAL*FLPGENPTVAAVSH Trigger: ATGGGAAACAGCAGCAACAGTTGGGTTCTCCCCAGGGAGGAAGCACAAGGCTGGATGGGCCAGGCTGTGCAGGGAGGGACCAGGACAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS-3UTR CAA 90 bp | GTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCTTGCACCCTATCCGTGGGCGGCTCCCGGGTaGGGGAGGGACGGTGTCCCA | + |
Preference number: 5 (lower is better) Translates to: VPESSNYPEPETGLAPYPWAAPG*GRDGVP Trigger: TGGGACACCGTCCCTCCCCAACCCGGGAGCCGCCCA...CGGATAGGGTGCAAGGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCTGGGCGGCTCCCGGGTaGGGGAGGGACGGTGTCCCA | + |
Preference number: 5 (lower is better) Translates to: VGDPRFQRVAIIQSQKQAWAAPG*GRDGVP Trigger: TGGGACACCGTCCCTCCCCAACCCGGGAGCCGCCCA...GGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 90 bp | GCCTCCAAGGTCTGCTCTCTCTCCTTGCACAACAGGGCCACACCATaGCGGGCCAAGATGGCATCCTTCTGGGTAGAGAGGAGGTTCCTC | + |
Preference number: 5 (lower is better) Translates to: ASKVCSLSLHNRATP*RAKMASFWVERRFL Trigger: GAGGAACCTCCTCTCTACCCAGAAGGATGCCATCTTGGCCCGCCATGGTGTGGCCCTGTTGTGCAAGGAGAGAGAGCAGACCTTGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | TCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGCTGGCCCATCCAGCCTaGTGCTTCCTCCCTGGGGAG | + |
Preference number: 5 (lower is better) Translates to: SSGFWTHRKPPAQPVFDMLAHPA*CFLPGE Trigger: CTCCCCAGGGAGGAAGCACAAGGCTGGATGGGCCAG...CATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS-3UTR CAA 90 bp | GCCTCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGCATGGGACCTGCTaGTCCTGGTCCCTCCCTGCA | + |
Preference number: 5 (lower is better) Translates to: ASSGFWTHRKPPAQPVFDMHGTC*SWSLPA Trigger: TGCAGGGAGGGACCAGGACAAGCAGGTCCCATGCAT...GTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS-3UTR CAA 90 bp | GGACACACATCTGGACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCTCCTCGAACTCCTTCTaGGCGGCTTCCACTTTCCTC | + |
Preference number: 5 (lower is better) Translates to: GHTSGHPTEEQGGQPSLASSNSF*AASTFL Trigger: GAGGAAAGTGGAAGCCGCCAAGAAGGAGTTCGAGGA...GGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTCCAGATGTGTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 90 bp | CAGCCTGGGATGCGGTGTGTGCTGAAGCATCGGATGCAGAAGTCATaGCCACAGTCCAGCGAGATGGGCTCTCGAAGCCTTTCCAGACAG | + |
Preference number: 5 (lower is better) Translates to: QPGMRCVLKHRMQKS*PQSSEMGSRSLSRQ Trigger: CTGTCTGGAAAGGCTTCGAGAGCCCATCTCGCTGGACTGTGGCCATGACTTCTGCATCCGATGCTTCAGCACACACCGCATCCCAGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GCCTCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACGCGGAGGCCCTTCCTTaGCTTACAGATCTTCCGGCA | + |
Preference number: 5 (lower is better) Translates to: ASSGFWTHRKPPAQPVFDAEALP*LTDLPA Trigger: TGCCGGAAGATCTGTAAGCAAAGGAAGGGCCTCCGC...GTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 90 bp | GGGGCAGTGGCCGCTGTGGTAGGAGTTTCATCCTTTCCCCTAGACTaGGGAGGCCCTTCCTTTGCTTACAGATCTTCCGGCATTCAGGAC | + |
Preference number: 5 (lower is better) Translates to: GAVAAVVGVSSFPLD*GGPSFAYRSSGIQD Trigger: GTCCTGAATGCCGGAAGATCTGTAAGCAAAGGAAGGGCCTCCGCAGTCTAGGGGAAAGGATGAAACTCCTACCACAGCGGCCACTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 90 bp | ATTCGTACCAACAGCAGACGTTCTGCCCTCACAGCACAGGTCTCCTaGAGTGCAGGGGGCAGTGGCCGCTGTGGTAGGAGTTTCATCCTT | + |
Preference number: 5 (lower is better) Translates to: IRTNSRRSALTAQVS*SAGGSGRCGRSFIL Trigger: AAGGATGAAACTCCTACCACAGCGGCCACTGCCCCCTGCACTGCAGGAGACCTGTGCTGTGAGGGCAGAACGTCTGCTGTTGGTACGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 90 bp | TTGCACAACAGGGCCACACCATGGCGGGCCAAGATGGCATCCTTCTaGGTAGAGAGGAGGTTCCTCATCGTGTCAGGCAGGACTCGTAGT | + |
Preference number: 5 (lower is better) Translates to: LHNRATPWRAKMASF*VERRFLIVSGRTRS Trigger: ACTACGAGTCCTGCCTGACACGATGAGGAACCTCCTCTCTACCCAGAAGGATGCCATCTTGGCCCGCCATGGTGTGGCCCTGTTGTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 90 bp | GAGGGACGGTGTCCCAGGCCCAGCTCCAGCTTGGGGAATGATGCATaGGACCAACTGTTGCTGCTGTTTCCCATGAAGCTTCGTTTGCTC | + |
Preference number: 5 (lower is better) Translates to: EGRCPRPSSSLGNDA*DQLLLLFPMKLRLL Trigger: GAGCAAACGAAGCTTCATGGGAAACAGCAGCAACAGTTGGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCCTGGGACACCGTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCTTGCACCCTATCCGCTGGCCCATCCAGCCTaGTGCTTCCTCCCTGGGGAG | + |
Preference number: 5 (lower is better) Translates to: VPESSNYPEPETGLAPYPLAHPA*CFLPGE Trigger: CTCCCCAGGGAGGAAGCACAAGGCTGGATGGGCCAG...CGGATAGGGTGCAAGGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS-3UTR CAA 90 bp | GCCAGTATATACGTGGTCCCCTCTGAGTCCCTGATGTCCGCACCCTTCCTACTGGCGGAGGCCCTTCCTTaGCTTACAGATCTTCCGGCA | + |
Preference number: 5 (lower is better) Translates to: ASIYVVPSESLMSAPFLLAEALP*LTDLPA Trigger: TGCCGGAAGATCTGTAAGCAAAGGAAGGGCCTCCGC...CAGTAGGAAGGGTGCGGACATCAGGGACTCAGAGGGGACCACGTATATACTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | ACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGAGCAGCTCCTGGACCTaGGGGTATTTGCCGGACAGC | + |
Preference number: 5 (lower is better) Translates to: THRKPPAQPVFDMGHSTRSSSWT*GYLPDS Trigger: GCTGTCCGGCAAATACCCCAAGGTCCAGGAGCTGCT...CCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GCCTCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACCTCTCGGTCCCCTCCTaGAACTCTCTCATCTTCCTC | + |
Preference number: 5 (lower is better) Translates to: ASSGFWTHRKPPAQPVFDLSVPS*NSLIFL Trigger: GAGGAAGATGAGAGAGTTCAAGGAGGGGACCGAGAG...GTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS TCA 90 bp | CTCTGGGCCTGCCGCTGTCACCAGATTCCAGGCTTGGTAAGCCACTaGGCAAGTGGTCCAAAAGGAAGGACTTTCCTGAGTGCTGCTCTC | + |
Preference number: 5 (lower is better) Translates to: LWACRCHQIPGLVSH*ASGPKGRTFLSAAL Trigger: GAGAGCAGCACTCAGGAAAGTCCTTCCTTTTGGACCACTTGCTCAGTGGCTTACCAAGCCTGGAATCTGGTGACAGCGGCAGGCCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 90 bp | AAGCCACTGAGCAAGTGGTCCAAAAGGAAGGACTTTCCTGAGTGCTaGTCTCCCAGGACAGCCAATAAGCAGACGGGTGTGTCCCTGGCC | + |
Preference number: 5 (lower is better) Translates to: KPLSKWSKRKDFPEC*SPRTANKQTGVSLA Trigger: GGCCAGGGACACACCCGTCTGCTTATTGGCTGTCCTGGGAGAGCAGCACTCAGGAAAGTCCTTCCTTTTGGACCACTTGCTCAGTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | CAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCAGTGAGAGCACAGAGCTaGACCCTTGTCTCCTTGCTC | + |
Preference number: 5 (lower is better) Translates to: QGGQPSLAFWSSFGNKSPVRAQS*TLVSLL Trigger: GAGCAAGGAGACAAGGGTCAAGCTCTGTGCTCTCAC...TGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | AGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTCTCACTCCAGTACCCTaGACAGCGGCTCTTAGCGTG | + |
Preference number: 5 (lower is better) Translates to: SSFPALSLPTLWQNLARTLTPVP*TAALSV Trigger: CACGCTAAGAGCCGCTGTCAAGGGTACTGGAGTGAG...AGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 90 bp | GGTAAGCCACTGAGCAAGTGGTCCAAAAGGAAGGACTTTCCTGAGTaGTGCTCTCCCAGGACAGCCAATAAGCAGACGGGTGTGTCCCTG | + |
Preference number: 5 (lower is better) Translates to: GKPLSKWSKRKDFPE*CSPRTANKQTGVSL Trigger: CAGGGACACACCCGTCTGCTTATTGGCTGTCCTGGGAGAGCAGCACTCAGGAAAGTCCTTCCTTTTGGACCACTTGCTCAGTGGCTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 90 bp | CTGCCGCTGTCACCAGATTCCAGGCTTGGTAAGCCACTGAGCAAGTaGTCCAAAAGGAAGGACTTTCCTGAGTGCTGCTCTCCCAGGACA | + |
Preference number: 5 (lower is better) Translates to: LPLSPDSRLGKPLSK*SKRKDFPECCSPRT Trigger: TGTCCTGGGAGAGCAGCACTCAGGAAAGTCCTTCCTTTTGGACCACTTGCTCAGTGGCTTACCAAGCCTGGAATCTGGTGACAGCGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 90 bp | TGTAGGCCCGGAAATGGTGGGAGAAGTCATCTTCTGTGTTGCCTCTaGGGCTGGCTTGGTCTTTGTTTACCCACTGCCTCTCAGGAGCAG | + |
Preference number: 5 (lower is better) Translates to: CRPGNGGRSHLLCCL*GWLGLCLPTASQEQ Trigger: CTGCTCCTGAGAGGCAGTGGGTAAACAAAGACCAAGCCAGCCCCAGAGGCAACACAGAAGATGACTTCTCCCACCATTTCCGGGCCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCTTGCACCCTATCCGATGCATGGGACCTGCTaGTCCTGGTCCCTCCCTGCA | + |
Preference number: 5 (lower is better) Translates to: VPESSNYPEPETGLAPYPMHGTC*SWSLPA Trigger: TGCAGGGAGGGACCAGGACAAGCAGGTCCCATGCAT...CGGATAGGGTGCAAGGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS-3UTR CAA 90 bp | TCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGTTGACCCTTGTCTCCTaGCTCAGTTCTGGGCTCATG | + |
Preference number: 5 (lower is better) Translates to: SGFWTHRKPPAQPVFDMGLTLVS*LSSGLM Trigger: CATGAGCCCAGAACTGAGCAAGGAGACAAGGGTCAA...CCCCATGTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCAGCAGCTCCTGGACCTaGGGGTATTTGCCGGACAGC | + |
Preference number: 5 (lower is better) Translates to: VGDPRFQRVAIIQSQKQASSSWT*GYLPDS Trigger: GCTGTCCGGCAAATACCCCAAGGTCCAGGAGCTGCT...GGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTCTCACTCCAGTACCCTaGACAGCGGCTCTTAGCGTG | + |
Preference number: 5 (lower is better) Translates to: VSCTFPSHTLAEPGTDCFLTPVP*TAALSV Trigger: CACGCTAAGAGCCGCTGTCAAGGGTACTGGAGTGAG...AAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | AAACAGGCCTTGCACCCTATCCGCTGTACTCCAAGTACAGCCTCGTGGCCAGAACTCTCGGTCCCCTCCTaGAACTCTCTCATCTTCCTC | + |
Preference number: 5 (lower is better) Translates to: KQALHPIRCTPSTASWPELSVPS*NSLIFL Trigger: GAGGAAGATGAGAGAGTTCAAGGAGGGGACCGAGAG...TTCTGGCCACGAGGCTGTACTTGGAGTACAGCGGATAGGGTGCAAGGCCTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 90 bp | CCAAGATGTAGGCCCGGAAATGGTGGGAGAAGTCATCTTCTGTGTTaGCTCTGGGGCTGGCTTGGTCTTTGTTTACCCACTGCCTCTCAG | + |
Preference number: 5 (lower is better) Translates to: PRCRPGNGGRSHLLC*LWGWLGLCLPTASQ Trigger: CTGAGAGGCAGTGGGTAAACAAAGACCAAGCCAGCCCCAGAGGCAACACAGAAGATGACTTCTCCCACCATTTCCGGGCCTACATCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 90 bp | TGGTGGCTATGTCCTGCTGTCTCACGTACTCCTCGAACTCCTTCTTaGCGGCTTCCACTTTCCTCAGATCATGGAGCTGAGCAGCCATCT | + |
Preference number: 5 (lower is better) Translates to: WWLCPAVSRTPRTPS*RLPLSSDHGAEQPS Trigger: AGATGGCTGCTCAGCTCCATGATCTGAGGAAAGTGGAAGCCGCCAAGAAGGAGTTCGAGGAGTACGTGAGACAGCAGGACATAGCCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 90 bp | TCCTCATCGTGTCAGGCAGGACTCGTAGTGCAGAGAAGATGCGCTTaGTGGCTATGTCCTGCTGTCTCACGTACTCCTCGAACTCCTTCT | + |
Preference number: 5 (lower is better) Translates to: SSSCQAGLVVQRRCA*WLCPAVSRTPRTPS Trigger: AGAAGGAGTTCGAGGAGTACGTGAGACAGCAGGACATAGCCACCAAGCGCATCTTCTCTGCACTACGAGTCCTGCCTGACACGATGAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | AGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTTTGACCCTTGTCTCCTaGCTCAGTTCTGGGCTCATG | + |
Preference number: 5 (lower is better) Translates to: SSFPALSLPTLWQNLARTLTLVS*LSSGLM Trigger: CATGAGCCCAGAACTGAGCAAGGAGACAAGGGTCAA...AGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GCCAGTATATACGTGGTCCCCTCTGAGTCCCTGATGTCCGCACCCTTCCTACTGGGTATCCTTCAGCTCTaGGGAGGTATTCAGGATCTG | + |
Preference number: 5 (lower is better) Translates to: ASIYVVPSESLMSAPFLLGILQL*GGIQDL Trigger: CAGATCCTGAATACCTCCCAAGAGCTGAAGGATACC...CAGTAGGAAGGGTGCGGACATCAGGGACTCAGAGGGGACCACGTATATACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | TCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTAGCACAGAATGCAATCGGAAGTCATCTTCTGTGTaGCCTCTGGGGCTGGCTTGG | + |
Preference number: 5 (lower is better) Translates to: SHTLAEPGTDCFSTECNRKSSSV*PLGLAW Trigger: CCAAGCCAGCCCCAGAGGCAACACAGAAGATGACTT...CCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | CCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAAAAGTCATCTTCTGTGTaGCCTCTGGGGCTGGCTTGG | + |
Preference number: 5 (lower is better) Translates to: PAKPGLLEQFWKQVTTPEKSSSV*PLGLAW Trigger: CCAAGCCAGCCCCAGAGGCAACACAGAAGATGACTT...TTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTTCCTCGAACTCCTTCTaGGCGGCTTCCACTTTCCTC | + |
Preference number: 5 (lower is better) Translates to: VSCTFPSHTLAEPGTDCFSSNSF*AASTFL Trigger: GAGGAAAGTGGAAGCCGCCAAGAAGGAGTTCGAGGA...AAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GACACCCAACTGAAGAGCAGGGAGGCCAGCCAAGCCTGGCCTTCTGGAGCAGTTGATCCAGATGCTGGATaGGTACCATCCCATAATGTT | + |
Preference number: 5 (lower is better) Translates to: DTQLKSREASQAWPSGAVDPDAG*VPSHNV Trigger: AACATTATGGGATGGTACCAATCCAGCATCTGGATC...AACTGCTCCAGAAGGCCAGGCTTGGCTGGCCTCCCTGCTCTTCAGTTGGGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000102661.4 |
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CDS GCA 90 bp | GGTAGGAGTTTCATCCTTTCCCCTAGACTGCGGAGGCCCTTCCTTTaGTTACAGATCTTCCGGCATTCAGGACAGCATGGTAGCTCACAG | + |
Preference number: 5 (lower is better) Translates to: GRSFILSPRLRRPFL*LQIFRHSGQHGSSQ Trigger: CTGTGAGCTACCATGCTGTCCTGAATGCCGGAAGATCTGTAAGCAAAGGAAGGGCCTCCGCAGTCTAGGGGAAAGGATGAAACTCCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | CCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGGGAGGCCCAGCTCCAGCTaGGGGAATGATGCATGGGAC | + |
Preference number: 5 (lower is better) Translates to: PSSKVSYAGTYPNCKTNGRPSSS*GNDAWD Trigger: GTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCCT...CCCATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGAAACAGGCCGTGAGAGCACAGAGCTaGACCCTTGTCTCCTTGCTC | + |
Preference number: 5 (lower is better) Translates to: VGDPRFQRVAIIQSQKQAVRAQS*TLVSLL Trigger: GAGCAAGGAGACAAGGGTCAAGCTCTGTGCTCTCAC...GGCCTGTTTCTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTATAGCTAGCAGCTCCTGGACCTaGGGGTATTTGCCGGACAGC | + |
Preference number: 5 (lower is better) Translates to: AWPSGAVLETSHHSRIIASSSWT*GYLPDS Trigger: GCTGTCCGGCAAATACCCCAAGGTCCAGGAGCTGCT...AGCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCCAGTATCTCTCGGTCCCCTCCTaGAACTCTCTCATCTTCCTC | + |
Preference number: 5 (lower is better) Translates to: VNPQLSQCLTWGIQQGQYLSVPS*NSLIFL Trigger: GAGGAAGATGAGAGAGTTCAAGGAGGGGACCGAGAG...ATACTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GCCTCCTCAGGTTTCTGGACCCACCGTAAACCCCCAGCTCAGCCAGTGTTTGACGATCCAGATGCTGGATaGGTACCATCCCATAATGTT | + |
Preference number: 5 (lower is better) Translates to: ASSGFWTHRKPPAQPVFDDPDAG*VPSHNV Trigger: AACATTATGGGATGGTACCAATCCAGCATCTGGATC...GTCAAACACTGGCTGAGCTGGGGGTTTACGGTGGGTCCAGAAACCTGAGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | CCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGGGGCGGAGGCCCTTCCTTaGCTTACAGATCTTCCGGCA | + |
Preference number: 5 (lower is better) Translates to: PSSKVSYAGTYPNCKTNGAEALP*LTDLPA Trigger: TGCCGGAAGATCTGTAAGCAAAGGAAGGGCCTCCGC...CCCATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | CCAGCCAAGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAAGGTATCCTTCAGCTCTaGGGAGGTATTCAGGATCTG | + |
Preference number: 5 (lower is better) Translates to: PAKPGLLEQFWKQVTTPEGILQL*GGIQDL Trigger: CAGATCCTGAATACCTCCCAAGAGCTGAAGGATACC...TTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCTTGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | TCCCACACTTTGGCAGAACCTGGCACGGACTGCTTTAGCACAGAATGCAATCGGATCTCATCAGGAGAGTaGAAACTGGGCCCAGTCTTC | + |
Preference number: 5 (lower is better) Translates to: SHTLAEPGTDCFSTECNRISSGE*KLGPVF Trigger: GAAGACTGGGCCCAGTTTCAACTCTCCTGATGAGAT...CCGATTGCATTCTGTGCTAAAGCAGTCCGTGCCAGGTTCTGCCAAAGTGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | AGCCTGGCCTTCTGGAGCAGTTTTGGAAACAAGTCACCACTCCAGAATTATAGCGTGAGAGCACAGAGCTaGACCCTTGTCTCCTTGCTC | + |
Preference number: 5 (lower is better) Translates to: SLAFWSSFGNKSPLQNYSVRAQS*TLVSLL Trigger: GAGCAAGGAGACAAGGGTCAAGCTCTGTGCTCTCAC...GCTATAATTCTGGAGTGGTGACTTGTTTCCAAAACTGCTCCAGAAGGCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | GTAAACCCCCAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCCAGTATGGTATCCTTCAGCTCTaGGGAGGTATTCAGGATCTG | + |
Preference number: 5 (lower is better) Translates to: VNPQLSQCLTWGIQQGQYGILQL*GGIQDL Trigger: CAGATCCTGAATACCTCCCAAGAGCTGAAGGATACC...ATACTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTGGGGGTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | ATGTTAAAAGACGGAGCTCGTTTCCTGCACTTTCCCTTCCCACACTTTGGCAGATCCTCGAACTCCTTCTaGGCGGCTTCCACTTTCCTC | + |
Preference number: 5 (lower is better) Translates to: MLKDGARFLHFPFPHFGRSSNSF*AASTFL Trigger: GAGGAAAGTGGAAGCCGCCAAGAAGGAGTTCGAGGA...TCTGCCAAAGTGTGGGAAGGGAAAGTGCAGGAAACGAGCTCCGTCTTTTAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS TCA 90 bp | AGCTTCTGGAGTATGTCACCCACGTGCCCTTGCCCTGACTTATTATaGTGGGAAGAGTCTCGGACTAAGAGATCCAGATGCTGGAAGAGA | + |
Preference number: 5 (lower is better) Translates to: SFWSMSPTCPCPDLL*WEESRTKRSRCWKR Trigger: TCTCTTCCAGCATCTGGATCTCTTAGTCCGAGACTCTTCCCATCATAATAAGTCAGGGCAAGGGCACGTGGGTGACATACTCCAGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060255.14 |
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CDS TCA 90 bp | AGCTTCTGGAGTATGTCACCCACGTGCCCTTGCCCTGACTTATTATaGTGGGAAGAGTCTCGGACTAAGAGATCCAGATGCTGGATTGGT | + |
Preference number: 5 (lower is better) Translates to: SFWSMSPTCPCPDLL*WEESRTKRSRCWIG Trigger: ACCAATCCAGCATCTGGATCTCTTAGTCCGAGACTCTTCCCATCATAATAAGTCAGGGCAAGGGCACGTGGGTGACATACTCCAGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000102661.4 |
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CDS CCA 90 bp | TCCAGATGCTGGAAGAGAAAGGGTCCTGACACCGGCAGCCGGGATTaGTGTGTCAGGATTGACGAAACTAGAAATTGTCTTACCTGGATT | + |
Preference number: 5 (lower is better) Translates to: SRCWKRKGPDTGSRD*CVRIDETRNCLTWI Trigger: AATCCAGGTAAGACAATTTCTAGTTTCGTCAATCCTGACACACCAATCCCGGCTGCCGGTGTCAGGACCCTTTCTCTTCCAGCATCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060255.14 |
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CDS-3UTR CAA 90 bp | CAGCTCAGCCAGTGTTTGACATGGGGCATTCAACAAGGCCAGTATATACGTGGTATCTCATCAGGAGAGTaGAAACTGGGCCCAGTCTTC | + |
Preference number: 5 (lower is better) Translates to: QLSQCLTWGIQQGQYIRGISSGE*KLGPVF Trigger: GAAGACTGGGCCCAGTTTCAACTCTCCTGATGAGAT...ACCACGTATATACTGGCCTTGTTGAATGCCCCATGTCAAACACTGGCTGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 90 bp | GGACTAAGAGATCCAGATGCTGGATTGGTACCATCCCATAATGTTTaGCCATCACCTCAGCCACGTGAACGAACATCTCTAGATAGCCCA | + |
Preference number: 5 (lower is better) Translates to: GLRDPDAGLVPSHNV*PSPQPRERTSLDSP Trigger: TGGGCTATCTAGAGATGTTCGTTCACGTGGCTGAGGTGATGGGCAAACATTATGGGATGGTACCAATCCAGCATCTGGATCTCTTAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | ATCGGAGGTGTGGTTCTTTGGCATGTAATCTGTGTTGATCCATCCAAATGGGCTTTGACCCTTGTCTCCTaGCTCAGTTCTGGGCTCATG | + |
Preference number: 5 (lower is better) Translates to: IGGVVLWHVICVDPSKWALTLVS*LSSGLM Trigger: CATGAGCCCAGAACTGAGCAAGGAGACAAGGGTCAA...AGCCCATTTGGATGGATCAACACAGATTACATGCCAAAGAACCACACCTCCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | CTCCTAGCTCCAAAGTCAGTTATGCTGGGACCTATCCCAACTGTAAAACGAATGATCTCATCAGGAGAGTaGAAACTGGGCCCAGTCTTC | + |
Preference number: 5 (lower is better) Translates to: LLAPKSVMLGPIPTVKRMISSGE*KLGPVF Trigger: GAAGACTGGGCCCAGTTTCAACTCTCCTGATGAGAT...CATTCGTTTTACAGTTGGGATAGGTCCCAGCATAACTGACTTTGGAGCTAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS-3UTR CAA 90 bp | CCTTATGTGGTGGGAGATCCTAGGTTCCAGAGAGTAGCAATTATCCAGAGCCAGATTGTCTTACCTGGATaGGTACCATCCCATAATGTT | + |
Preference number: 5 (lower is better) Translates to: PYVVGDPRFQRVAIIQSQIVLPG*VPSHNV Trigger: AACATTATGGGATGGTACCAATCCAGGTAAGACAAT...CTGGCTCTGGATAATTGCTACTCTCTGGAACCTAGGATCTCCCACCACATAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060255.14 |
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CDS GCA 90 bp | AAACTAGAAATTGTCTTACCTGGATTGGTACCATCCCATAATGTTTaGCCATCACCTCAGCCACGTGAACGAACATCTCTAGATAGCCCA | + |
Preference number: 5 (lower is better) Translates to: KLEIVLPGLVPSHNV*PSPQPRERTSLDSP Trigger: TGGGCTATCTAGAGATGTTCGTTCACGTGGCTGAGGTGATGGGCAAACATTATGGGATGGTACCAATCCAGGTAAGACAATTTCTAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060255.14 |
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CDS GCA 72 bp | CGCCGCTGCTGCCATGCCTGCGCCCACCACACCCCCTaGCAGGCCCATGAGCCCAGCACCTACAGCGCCCCC | + |
Preference number: 6 (lower is better) Translates to: RRCCHACAHHTP*QAHEPSTYSAP Trigger: GGGGGCGCTGTAGGTGCTGGGCTCATGGGCCTGGCAGGGGGTGTGGTGGGCGCAGGCATGGCAGCAGCGGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 72 bp | TGCTACCATCCCAGCCTCAGCAGCCAACGCCGCTGCTaGCATGCCTGCGCCCACCACACCCCCTGCCAGGCC | + |
Preference number: 6 (lower is better) Translates to: CYHPSLSSQRRC*HACAHHTPCQA Trigger: GGCCTGGCAGGGGGTGTGGTGGGCGCAGGCATGGCAGCAGCGGCGTTGGCTGCTGAGGCTGGGATGGTAGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 72 bp | AGCTGCTACCATCCCAGCCTCAGCAGCCAACGCCGCTaGTGCCATGCCTGCGCCCACCACACCCCCTGCCAG | + |
Preference number: 6 (lower is better) Translates to: SCYHPSLSSQRR*CHACAHHTPCQ Trigger: CTGGCAGGGGGTGTGGTGGGCGCAGGCATGGCAGCAGCGGCGTTGGCTGCTGAGGCTGGGATGGTAGCAGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 90 bp | GGCTCCCGGGTTGGGGAGGGACGGTGTCCCAGGCCCAGCTCCAGCTaGGGGAATGATGCATGGGACCTGCTTGTCCTGGTCCCTCCCTGC | + |
Preference number: 6 (lower is better) Translates to: GSRVGEGRCPRPSSS*GNDAWDLLVLVPPC Trigger: GCAGGGAGGGACCAGGACAAGCAGGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCCTGGGACACCGTCCCTCCCCAACCCGGGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS CCA 72 bp | TTCCAGACAGATGGAGCAGGTGGGCGGCTCCCGGGTTaGGGAGGGACGGTGTCCCAGGCCCAGCTCCAGCTT | + |
Preference number: 6 (lower is better) Translates to: FQTDGAGGRLPG*GGTVSQAQLQL Trigger: AAGCTGGAGCTGGGCCTGGGACACCGTCCCTCCCCAACCCGGGAGCCGCCCACCTGCTCCATCTGTCTGGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS TCA 72 bp | GGGACGGTGTCCCAGGCCCAGCTCCAGCTTGGGGAATaGTGCATGGGACCTGCTTGTCCTGGTCCCTCCCTG | + |
Preference number: 6 (lower is better) Translates to: GTVSQAQLQLGE*CMGPACPGPSL Trigger: CAGGGAGGGACCAGGACAAGCAGGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCCTGGGACACCGTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS GCA 72 bp | GGCCCAGCTCCAGCTTGGGGAATGATGCATGGGACCTaGTTGTCCTGGTCCCTCCCTGCACAGCCTGGCCCA | + |
Preference number: 6 (lower is better) Translates to: GPAPAWGMMHGT*LSWSLPAQPGP Trigger: TGGGCCAGGCTGTGCAGGGAGGGACCAGGACAAGCAGGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS CAA 90 bp | GTCCCAGGCCCAGCTCCAGCTTGGGGAATGATGCATGGGACCTGCTaGTCCTGGTCCCTCCCTGCACAGCCTGGCCCATCCAGCCTTGTG | + |
Preference number: 6 (lower is better) Translates to: VPGPAPAWGMMHGTC*SWSLPAQPGPSSLV Trigger: CACAAGGCTGGATGGGCCAGGCTGTGCAGGGAGGGACCAGGACAAGCAGGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCCTGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS GCA 72 bp | GTTAGCGCCCCATCTGATCCCAGGCAGAGACCCCTCTaGTCTGGGCCTGCCGCTGTCACCAGATTCCAGGCT | + |
Preference number: 6 (lower is better) Translates to: VSAPSDPRQRPL*SGPAAVTRFQA Trigger: AGCCTGGAATCTGGTGACAGCGGCAGGCCCAGAGCAGAGGGGTCTCTGCCTGGGATCAGATGGGGCGCTAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 72 bp | TGTCCCAGGCCCAGCTCCAGCTTGGGGAATGATGCATaGGACCTGCTTGTCCTGGTCCCTCCCTGCACAGCC | + |
Preference number: 6 (lower is better) Translates to: CPRPSSSLGNDA*DLLVLVPPCTA Trigger: GGCTGTGCAGGGAGGGACCAGGACAAGCAGGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCCTGGGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS CCA 72 bp | TTGGGGAGGGACGGTGTCCCAGGCCCAGCTCCAGCTTaGGGAATGATGCATGGGACCTGCTTGTCCTGGTCC | + |
Preference number: 6 (lower is better) Translates to: LGRDGVPGPAPA*GMMHGTCLSWS Trigger: GGACCAGGACAAGCAGGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCCTGGGACACCGTCCCTCCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS CAA 90 bp | CAGCGGGCCCGTTTCCCGAGGAGCAGCTCCTGGACCTTGGGGTATTaGCCGGACAGCTTCTGGAGTATGTCACCCACGTGCCCTTGCCCT | + |
Preference number: 6 (lower is better) Translates to: QRARFPRSSSWTLGY*PDSFWSMSPTCPCP Trigger: AGGGCAAGGGCACGTGGGTGACATACTCCAGAAGCTGTCCGGCAAATACCCCAAGGTCCAGGAGCTGCTCCTCGGGAAACGGGCCCGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 90 bp | GCCTGCAGCTCGGCTTCCAGGGCCTCCAAGGTCTGCTCTCTCTCCTaGCACAACAGGGCCACACCATGGCGGGCCAAGATGGCATCCTTC | + |
Preference number: 6 (lower is better) Translates to: ACSSASRASKVCSLS*HNRATPWRAKMASF Trigger: GAAGGATGCCATCTTGGCCCGCCATGGTGTGGCCCTGTTGTGCAAGGAGAGAGAGCAGACCTTGGAGGCCCTGGAAGCCGAGCTGCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 90 bp | CCTGCTTGTCCTGGTCCCTCCCTGCACAGCCTGGCCCATCCAGCCTaGTGCTTCCTCCCTGGGGAGAACCCAACTGTTGCTGCTGTTTCC | + |
Preference number: 6 (lower is better) Translates to: PACPGPSLHSLAHPA*CFLPGENPTVAAVS Trigger: GGAAACAGCAGCAACAGTTGGGTTCTCCCCAGGGAGGAAGCACAAGGCTGGATGGGCCAGGCTGTGCAGGGAGGGACCAGGACAAGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 |
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CDS GCA 72 bp | AACAGCAGACGTTCTGCCCTCACAGCACAGGTCTCCTaGAGTGCAGGGGGCAGTGGCCGCTGTGGTAGGAGT | + |
Preference number: 6 (lower is better) Translates to: NSRRSALTAQVS*SAGGSGRCGRS Trigger: ACTCCTACCACAGCGGCCACTGCCCCCTGCACTGCAGGAGACCTGTGCTGTGAGGGCAGAACGTCTGCTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 72 bp | TTGGGGAGGGACGGTGTCCCAGGCCCAGCTCCAGCTTaGGGAATGATGCATGGGACCAACTGTTGCTGCTGT | + |
Preference number: 6 (lower is better) Translates to: LGRDGVPGPAPA*GMMHGTNCCCC Trigger: ACAGCAGCAACAGTTGGTCCCATGCATCATTCCCCAAGCTGGAGCTGGGCCTGGGACACCGTCCCTCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102661.4 |
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CDS CAA 72 bp | CAGCGGGCCCGTTTCCCGAGGAGCAGCTCCTGGACCTaGGGGTATTTGCCGGACAGCTTCTGGAGTATGTCA | + |
Preference number: 6 (lower is better) Translates to: QRARFPRSSSWT*GYLPDSFWSMS Trigger: TGACATACTCCAGAAGCTGTCCGGCAAATACCCCAAGGTCCAGGAGCTGCTCCTCGGGAAACGGGCCCGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 72 bp | TCCGGAGGCATTGATTCGTACCAACAGCAGACGTTCTaGCCTCACAGCACAGGTCTCCTGCAGTGCAGGGGG | + |
Preference number: 6 (lower is better) Translates to: SGGIDSYQQQTF*PHSTGLLQCRG Trigger: CCCCCTGCACTGCAGGAGACCTGTGCTGTGAGGGCAGAACGTCTGCTGTTGGTACGAATCAATGCCTCCGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 72 bp | GTTTCCCGAGGAGCAGCTCCTGGACCTTGGGGTATTTaGCGGACAGCTTCTGGAGTATGTCACCCACGTGCC | + |
Preference number: 6 (lower is better) Translates to: VSRGAAPGPWGI*RTASGVCHPRA Trigger: GGCACGTGGGTGACATACTCCAGAAGCTGTCCGGCAAATACCCCAAGGTCCAGGAGCTGCTCCTCGGGAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 72 bp | ATCCAGCCAGAGAGATTCTTGATCTCCTGTGCTAGCTaGTGCCCTGTGAGCAGGCGTCTGTCTCCCCTGGCC | + |
Preference number: 6 (lower is better) Translates to: IQPERFLISCAS*CPVSRRLSPLA Trigger: GGCCAGGGGAGACAGACGCCTGCTCACAGGGCAGCAGCTAGCACAGGAGATCAAGAATCTCTCTGGCTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 72 bp | CTCCCAGGACAGCCAATAAGCAGACGGGTGTGTCCCTaGCCAGTGGATGCTTCAGGCAACGGTTTATGGCGC | + |
Preference number: 6 (lower is better) Translates to: LPGQPISRRVCP*PVDASGNGLWR Trigger: GCGCCATAAACCGTTGCCTGAAGCATCCACTGGCCAGGGACACACCCGTCTGCTTATTGGCTGTCCTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 72 bp | GTCTGCTCTCTCTCCTTGCACAACAGGGCCACACCATaGCGGGCCAAGATGGCATCCTTCTGGGTAGAGAGG | + |
Preference number: 6 (lower is better) Translates to: VCSLSLHNRATP*RAKMASFWVER Trigger: CCTCTCTACCCAGAAGGATGCCATCTTGGCCCGCCATGGTGTGGCCCTGTTGTGCAAGGAGAGAGAGCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 72 bp | CGTTTCCCGAGGAGCAGCTCCTGGACCTTGGGGTATTaGCCGGACAGCTTCTGGAGTATGTCACCCACGTGC | + |
Preference number: 6 (lower is better) Translates to: RFPRSSSWTLGY*PDSFWSMSPTC Trigger: GCACGTGGGTGACATACTCCAGAAGCTGTCCGGCAAATACCCCAAGGTCCAGGAGCTGCTCCTCGGGAAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 72 bp | CTGGGCCCAGTCTTCCCCATCCAGCCAGAGAGATTCTaGATCTCCTGTGCTAGCTGCTGCCCTGTGAGCAGG | + |
Preference number: 6 (lower is better) Translates to: LGPVFPIQPERF*ISCASCCPVSR Trigger: CCTGCTCACAGGGCAGCAGCTAGCACAGGAGATCAAGAATCTCTCTGGCTGGATGGGGAAGACTGGGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 90 bp | CAACGGTTTATGGCGCCCATCCTGAGGATGAGGCCTCCGGAGGCATaGATTCGTACCAACAGCAGACGTTCTGCCCTCACAGCACAGGTC | + |
Preference number: 6 (lower is better) Translates to: QRFMAPILRMRPPEA*IRTNSRRSALTAQV Trigger: GACCTGTGCTGTGAGGGCAGAACGTCTGCTGTTGGTACGAATCAATGCCTCCGGAGGCCTCATCCTCAGGATGGGCGCCATAAACCGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 72 bp | ATGGCGCCCATCCTGAGGATGAGGCCTCCGGAGGCATaGATTCGTACCAACAGCAGACGTTCTGCCCTCACA | + |
Preference number: 6 (lower is better) Translates to: MAPILRMRPPEA*IRTNSRRSALT Trigger: TGTGAGGGCAGAACGTCTGCTGTTGGTACGAATCAATGCCTCCGGAGGCCTCATCCTCAGGATGGGCGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 90 bp | GAGTTGAAACTGGGCCCAGTCTTCCCCATCCAGCCAGAGAGATTCTaGATCTCCTGTGCTAGCTGCTGCCCTGTGAGCAGGCGTCTGTCT | + |
Preference number: 6 (lower is better) Translates to: ELKLGPVFPIQPERF*ISCASCCPVSRRLS Trigger: AGACAGACGCCTGCTCACAGGGCAGCAGCTAGCACAGGAGATCAAGAATCTCTCTGGCTGGATGGGGAAGACTGGGCCCAGTTTCAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 72 bp | GCCGCTGTGGTAGGAGTTTCATCCTTTCCCCTAGACTaGGGAGGCCCTTCCTTTGCTTACAGATCTTCCGGC | + |
Preference number: 6 (lower is better) Translates to: AAVVGVSSFPLD*GGPSFAYRSSG Trigger: GCCGGAAGATCTGTAAGCAAAGGAAGGGCCTCCGCAGTCTAGGGGAAAGGATGAAACTCCTACCACAGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 72 bp | ATGCGGTGTGTGCTGAAGCATCGGATGCAGAAGTCATaGCCACAGTCCAGCGAGATGGGCTCTCGAAGCCTT | + |
Preference number: 6 (lower is better) Translates to: MRCVLKHRMQKS*PQSSEMGSRSL Trigger: AAGGCTTCGAGAGCCCATCTCGCTGGACTGTGGCCATGACTTCTGCATCCGATGCTTCAGCACACACCGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 72 bp | AGCTCCTGGACCTTGGGGTATTTGCCGGACAGCTTCTaGAGTATGTCACCCACGTGCCCTTGCCCTGACTTA | + |
Preference number: 6 (lower is better) Translates to: SSWTLGYLPDSF*SMSPTCPCPDL Trigger: TAAGTCAGGGCAAGGGCACGTGGGTGACATACTCCAGAAGCTGTCCGGCAAATACCCCAAGGTCCAGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 72 bp | TCATCTTCTGTGTTGCCTCTGGGGCTGGCTTGGTCTTaGTTTACCCACTGCCTCTCAGGAGCAGGGAGGAGG | + |
Preference number: 6 (lower is better) Translates to: SSSVLPLGLAWS*FTHCLSGAGRR Trigger: CCTCCTCCCTGCTCCTGAGAGGCAGTGGGTAAACAAAGACCAAGCCAGCCCCAGAGGCAACACAGAAGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS TCA 72 bp | ATGAAGCTTCGTTTGCTCTCCCGTTTGCCAAGCCGATaGCAAAAAGCAGTGACTGACAGGACGGGCCTCGGC | + |
Preference number: 6 (lower is better) Translates to: MKLRLLSRLPSR*QKAVTDRTGLG Trigger: GCCGAGGCCCGTCCTGTCAGTCACTGCTTTTTGTCATCGGCTTGGCAAACGGGAGAGCAAACGAAGCTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS TCA 72 bp | GATCATGGAGCTGAGCAGCCATCTCATCAGGAGAGTTaGAACTGGGCCCAGTCTTCCCCATCCAGCCAGAGA | + |
Preference number: 6 (lower is better) Translates to: DHGAEQPSHQES*NWAQSSPSSQR Trigger: TCTCTGGCTGGATGGGGAAGACTGGGCCCAGTTTCAACTCTCCTGATGAGATGGCTGCTCAGCTCCATGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 90 bp | GAAATGGTGGGAGAAGTCATCTTCTGTGTTGCCTCTGGGGCTGGCTaGGTCTTTGTTTACCCACTGCCTCTCAGGAGCAGGGAGGAGGTA | + |
Preference number: 6 (lower is better) Translates to: EMVGEVIFCVASGAG*VFVYPLPLRSREEV Trigger: TACCTCCTCCCTGCTCCTGAGAGGCAGTGGGTAAACAAAGACCAAGCCAGCCCCAGAGGCAACACAGAAGATGACTTCTCCCACCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 90 bp | TTCCTCATCGTGTCAGGCAGGACTCGTAGTGCAGAGAAGATGCGCTaGGTGGCTATGTCCTGCTGTCTCACGTACTCCTCGAACTCCTTC | + |
Preference number: 6 (lower is better) Translates to: FLIVSGRTRSAEKMR*VAMSCCLTYSSNSF Trigger: GAAGGAGTTCGAGGAGTACGTGAGACAGCAGGACATAGCCACCAAGCGCATCTTCTCTGCACTACGAGTCCTGCCTGACACGATGAGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 72 bp | CTGAGCAAGTGGTCCAAAAGGAAGGACTTTCCTGAGTaGTGCTCTCCCAGGACAGCCAATAAGCAGACGGGT | + |
Preference number: 6 (lower is better) Translates to: LSKWSKRKDFPE*CSPRTANKQTG Trigger: ACCCGTCTGCTTATTGGCTGTCCTGGGAGAGCAGCACTCAGGAAAGTCCTTCCTTTTGGACCACTTGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 72 bp | AGGCCCGGAAATGGTGGGAGAAGTCATCTTCTGTGTTaGCTCTGGGGCTGGCTTGGTCTTTGTTTACCCACT | + |
Preference number: 6 (lower is better) Translates to: RPGNGGRSHLLC*LWGWLGLCLPT Trigger: AGTGGGTAAACAAAGACCAAGCCAGCCCCAGAGGCAACACAGAAGATGACTTCTCCCACCATTTCCGGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 72 bp | TCATCGTGTCAGGCAGGACTCGTAGTGCAGAGAAGATaGGCTTGGTGGCTATGTCCTGCTGTCTCACGTACT | + |
Preference number: 6 (lower is better) Translates to: SSCQAGLVVQRR*AWWLCPAVSRT Trigger: AGTACGTGAGACAGCAGGACATAGCCACCAAGCGCATCTTCTCTGCACTACGAGTCCTGCCTGACACGATGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CCA 72 bp | TGTCCTGCTGTCTCACGTACTCCTCGAACTCCTTCTTaGCGGCTTCCACTTTCCTCAGATCATGGAGCTGAG | + |
Preference number: 6 (lower is better) Translates to: CPAVSRTPRTPS*RLPLSSDHGAE Trigger: CTCAGCTCCATGATCTGAGGAAAGTGGAAGCCGCCAAGAAGGAGTTCGAGGAGTACGTGAGACAGCAGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 90 bp | GAACTGAGCATCATGGTGAGAGCACAGAGCTTGACCCTTGTCTCCTaGCTCAGTTCTGGGCTCATGACATCCCCCGTGTCCACTAAGAAC | + |
Preference number: 6 (lower is better) Translates to: ELSIMVRAQSLTLVS*LSSGLMTSPVSTKN Trigger: GTTCTTAGTGGACACGGGGGATGTCATGAGCCCAGAACTGAGCAAGGAGACAAGGGTCAAGCTCTGTGCTCTCACCATGATGCTCAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS GCA 72 bp | TTCATCCTTTCCCCTAGACTGCGGAGGCCCTTCCTTTaGTTACAGATCTTCCGGCATTCAGGACAGCATGGT | + |
Preference number: 6 (lower is better) Translates to: FILSPRLRRPFL*LQIFRHSGQHG Trigger: ACCATGCTGTCCTGAATGCCGGAAGATCTGTAAGCAAAGGAAGGGCCTCCGCAGTCTAGGGGAAAGGATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054927.14 ENSMUST00000060255.14 ENSMUST00000102661.4 |
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CDS CAA 90 bp | AGAGAAAGGGTCCTGACACCGGCAGCCGGGATTGGTGTGTCAGGATaGACGAAACTAGAAATTGTCTTACCTGGATTGGTACCATCCCAT | + |
Preference number: 6 (lower is better) Translates to: RERVLTPAAGIGVSG*TKLEIVLPGLVPSH Trigger: ATGGGATGGTACCAATCCAGGTAAGACAATTTCTAGTTTCGTCAATCCTGACACACCAATCCCGGCTGCCGGTGTCAGGACCCTTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060255.14 |
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CDS CCA 72 bp | TGGAAGAGAAAGGGTCCTGACACCGGCAGCCGGGATTaGTGTGTCAGGATTGACGAAACTAGAAATTGTCTT | + |
Preference number: 6 (lower is better) Translates to: WKRKGPDTGSRD*CVRIDETRNCL Trigger: AAGACAATTTCTAGTTTCGTCAATCCTGACACACCAATCCCGGCTGCCGGTGTCAGGACCCTTTCTCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060255.14 |
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CDS GCA 72 bp | GATCCAGATGCTGGATTGGTACCATCCCATAATGTTTaGCCATCACCTCAGCCACGTGAACGAACATCTCTA | + |
Preference number: 6 (lower is better) Translates to: DPDAGLVPSHNV*PSPQPRERTSL Trigger: TAGAGATGTTCGTTCACGTGGCTGAGGTGATGGGCAAACATTATGGGATGGTACCAATCCAGCATCTGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054927.14 ENSMUST00000102661.4 |
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CDS GCA 72 bp | ATTGTCTTACCTGGATTGGTACCATCCCATAATGTTTaGCCATCACCTCAGCCACGTGAACGAACATCTCTA | + |
Preference number: 6 (lower is better) Translates to: IVLPGLVPSHNV*PSPQPRERTSL Trigger: TAGAGATGTTCGTTCACGTGGCTGAGGTGATGGGCAAACATTATGGGATGGTACCAATCCAGGTAAGACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060255.14 |
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CDS CAA 90 bp | ATTGGTGTGTCAGGATTGACGAAACTAGAAATTGTCTTACCTGGATaGGTACCATCCCATAATGTTTGCCCATCACCTCAGCCACGTGAA | + |
Preference number: 6 (lower is better) Translates to: IGVSGLTKLEIVLPG*VPSHNVCPSPQPRE Trigger: TTCACGTGGCTGAGGTGATGGGCAAACATTATGGGATGGTACCAATCCAGGTAAGACAATTTCTAGTTTCGTCAATCCTGACACACCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060255.14 |
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CDS CAA 72 bp | TCAGGATTGACGAAACTAGAAATTGTCTTACCTGGATaGGTACCATCCCATAATGTTTGCCCATCACCTCAG | + |
Preference number: 6 (lower is better) Translates to: SGLTKLEIVLPG*VPSHNVCPSPQ Trigger: CTGAGGTGATGGGCAAACATTATGGGATGGTACCAATCCAGGTAAGACAATTTCTAGTTTCGTCAATCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060255.14 |