Pregenerated sensors for RNF103 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052656Ensembl transcript IDs: ENSMUST00000064637.11, ENSMUST00000114178.8, ENSMUST00000114179.3
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCTCTTCCTTTCACATGGGCTGCTCTCACATTTATTGGCACATaGACAAGCCTCAGTATCACAGTGACTTGTTCTTCCTGGAGAACT | + |
|
Preference number: 1 (lower is better) Translates to: PPLPFTWAALTFIGT*TSLSITVTCSSWRT Trigger: AGTTCTCCAGGAAGAACAAGTCACTGTGATACTGAGGCTTGTTCATGTGCCAATAAATGTGAGAGCAGCCCATGTGAAAGGAAGAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR CCA 90 bp | CATACGACCTCCTCTTCCTTTCACATGGGCTGCTCTCACATTTATTaGCACATGAACAAGCCTCAGTATCACAGTGACTTGTTCTTCCTG | + |
|
Preference number: 1 (lower is better) Translates to: HTTSSSFHMGCSHIY*HMNKPQYHSDLFFL Trigger: CAGGAAGAACAAGTCACTGTGATACTGAGGCTTGTTCATGTGCCAATAAATGTGAGAGCAGCCCATGTGAAAGGAAGAGGAGGTCGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR GCA 90 bp | CAGTATTATGTGATCCATACGACCTCCTCTTCCTTTCACATGGGCTaGTCTCACATTTATTGGCACATGAACAAGCCTCAGTATCACAGT | + |
|
Preference number: 1 (lower is better) Translates to: QYYVIHTTSSSFHMG*SHIYWHMNKPQYHS Trigger: ACTGTGATACTGAGGCTTGTTCATGTGCCAATAAATGTGAGAGCAGCCCATGTGAAAGGAAGAGGAGGTCGTATGGATCACATAATACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR TCA 90 bp | TCTTCTCAAAGTAATCAATTAGCAAACCATGTCCAAGGTATGTACTaGGAAACAGGGCTGGGTGTGAAGTGTAAAACATCCAGTCTGCCC | + |
|
Preference number: 1 (lower is better) Translates to: SSQSNQLANHVQGMY*ETGLGVKCKTSSLP Trigger: GGGCAGACTGGATGTTTTACACTTCACACCCAGCCCTGTTTCTCAGTACATACCTTGGACATGGTTTGCTAATTGATTACTTTGAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR CCA 90 bp | CTACAGGAAAGTTCTGAAAAGAAGCAATCGGGTGGAAGAGGTAGCTaGTGTACCAGTCCCACAGACTTGATAACCATTCTAAATTATTCG | + |
|
Preference number: 1 (lower is better) Translates to: LQESSEKKQSGGRGS*CTSPTDLITILNYS Trigger: CGAATAATTTAGAATGGTTATCAAGTCTGTGGGACTGGTACACCAGCTACCTCTTCCACCCGATTGCTTCTTTTCAGAACTTTCCTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR GCA 90 bp | GTTTTGATCCGAGAAGCTGCATGGGCAGTTATCCACTTAAAAATGTaGTCTACTTCAATCTTGCGTCCACTGTACTCTTTAAGCATGACT | + |
|
Preference number: 1 (lower is better) Translates to: VLIREAAWAVIHLKM*STSILRPLYSLSMT Trigger: AGTCATGCTTAAAGAGTACAGTGGACGCAAGATTGAAGTAGAGCACATTTTTAAGTGGATAACTGCCCATGCAGCTTCTCGGATCAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR CCA 90 bp | TTCAAATGCTCCACATTATATATAGTTTTGATCCGAGAAGCTGCATaGGCAGTTATCCACTTAAAAATGTGCTCTACTTCAATCTTGCGT | + |
|
Preference number: 1 (lower is better) Translates to: FKCSTLYIVLIREAA*AVIHLKMCSTSILR Trigger: ACGCAAGATTGAAGTAGAGCACATTTTTAAGTGGATAACTGCCCATGCAGCTTCTCGGATCAAAACTATATATAATGTGGAGCATTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTTATATGAAGGCCAACGACAAACAGGGCAACAGTGTCGGCCCCCAGCCAACCACATTTATTGGCACATaGACAAGCCTCAGTATCACA | + |
|
Preference number: 2 (lower is better) Translates to: SYMKANDKQGNSVGPQPTTFIGT*TSLSIT Trigger: TGTGATACTGAGGCTTGTTCATGTGCCAATAAATGT...GGTTGGCTGGGGGCCGACACTGTTGCCCTGTTTGTCGTTGGCCTTCATATAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCTTTTTCTTATATGAAGGCCAACGACAAACAGGGCAACAGTGTCGGCCCCGTGACTTGTTCTTCCTaGAGAACTGTGAACAACGCT | + |
|
Preference number: 2 (lower is better) Translates to: AAFSYMKANDKQGNSVGPVTCSS*RTVNNA Trigger: AGCGTTGTTCACAGTTCTCCAGGAAGAACAAGTCAC...GGGGCCGACACTGTTGCCCTGTTTGTCGTTGGCCTTCATATAAGAAAAAGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCCAGTCTGCCCTTACCCACGAAGCCAGTGTGGTTGTATTAGAATACCGCAGATCCGAGAAGCTGCATaGGCAGTTATCCACTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HPVCPYPRSQCGCIRIPQIREAA*AVIHLK Trigger: TTTTAAGTGGATAACTGCCCATGCAGCTTCTCGGAT...CTGCGGTATTCTAATACAACCACACTGGCTTCGTGGGTAAGGGCAGACTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAGTATTATGTGATCCATACGACCTCCTCTTCCTTTCACATGGGCTGCTCTCAAAACAGGGCTGGGTGTaGAGTGTAAAACATCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SVLCDPYDLLFLSHGLLSKQGWV*SVKHPV Trigger: GACTGGATGTTTTACACTTCACACCCAGCCCTGTTT...TGAGAGCAGCCCATGTGAAAGGAAGAGGAGGTCGTATGGATCACATAATACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR GCA 90 bp | TTATACTTAATGCAGAGAAGAAAGCTGGCGGTTGGTCAAGGTTTGCAAATAGGTCCCAGCCTCTCCTTCTaGAGTACCTGTAAGAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LYLMQRRKLAVGQGLQIGPSLSF*STCKRV Trigger: CACTCTCTTACAGGTACTGCAGAAGGAGAGGCTGGG...ACCTATTTGCAAACCTTGACCAACCGCCAGCTTTCTTCTCTGCATTAAGTATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATACTTAATGCAGAGAAGAAAGCTGGCGGTTGGTCAAGGTTTGCAAATAGGTAGGCCCACTAGGATTTaGTCCTGCCTCATAAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LYLMQRRKLAVGQGLQIGRPTRI*SCLIKS Trigger: AGACTTTATGAGGCAGGATCAAATCCTAGTGGGCCT...ACCTATTTGCAAACCTTGACCAACCGCCAGCTTTCTTCTCTGCATTAAGTATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTACTAAAAGTGTCCATGTTGTCACTATCCGAGTCATTTTCAGTGTCTTGAGATGCAGAGAAGAAAGCTaGCGGTTGGTCAAGGTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: TTKSVHVVTIRVIFSVLRCREES*RLVKVC Trigger: GCAAACCTTGACCAACCGCCAGCTTTCTTCTCTGCA...TCTCAAGACACTGAAAATGACTCGGATAGTGACAACATGGACACTTTTAGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR CAA 90 bp | AGGGAATTGTATGTCCCTAAAGTGCTTATGAGAACCACAAATCGCTaGATGGTTGCTCCTTGTGTAATAAATAAGTCCATCCAAGCCATA | + |
|
Preference number: 2 (lower is better) Translates to: RELYVPKVLMRTTNR*MVAPCVINKSIQAI Trigger: TATGGCTTGGATGGACTTATTTATTACACAAGGAGCAACCATCAAGCGATTTGTGGTTCTCATAAGCACTTTAGGGACATACAATTCCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR GCA 90 bp | TATTATGTGATCCATACGACCTCCTCTTCCTTTCACATGGGCTGCTCTCACATTTATTTAACCAAGAGGTaGTGGACAGAGATTGTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: YYVIHTTSSSFHMGCSHIYLTKR*WTEIVK Trigger: TTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATA...AATGTGAGAGCAGCCCATGTGAAAGGAAGAGGAGGTCGTATGGATCACATAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR CAA 90 bp | AAGCTTATTAAGGACACATTGCACATGGTTAAGATGGAACATCATTaGACAACGGCTGTTGTTGTGCATATGGCTGCTTTTTCTTATATG | + |
|
Preference number: 2 (lower is better) Translates to: KLIKDTLHMVKMEHH*TTAVVVHMAAFSYM Trigger: CATATAAGAAAAAGCAGCCATATGCACAACAACAGCCGTTGTCAAATGATGTTCCATCTTAACCATGTGCAATGTGTCCTTAATAAGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR CAA 90 bp | CTTTTATTCCATTCTTCCTTCAAATGCTCCACATTATATATAGTTTaGATCCGAGAAGCTGCATGGGCAGTTATCCACTTAAAAATGTGC | + |
|
Preference number: 2 (lower is better) Translates to: LLFHSSFKCSTLYIV*IREAAWAVIHLKMC Trigger: GCACATTTTTAAGTGGATAACTGCCCATGCAGCTTCTCGGATCAAAACTATATATAATGTGGAGCATTTGAAGGAAGAATGGAATAAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR CAA 90 bp | TTAAAAAGGCAAGCTGTAAGATACTCAAAGCTTATTAAGGACACATaGCACATGGTTAAGATGGAACATCATTTGACAACGGCTGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LKRQAVRYSKLIKDT*HMVKMEHHLTTAVV Trigger: AACAACAGCCGTTGTCAAATGATGTTCCATCTTAACCATGTGCAATGTGTCCTTAATAAGCTTTGAGTATCTTACAGCTTGCCTTTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTATATGAAGGCCAACGACAAACAGGGCAACAGTGTCGGCCCCCAGCCAACCCAGTATCACAGTGACTaGTTCTTCCTGGAGAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: SYMKANDKQGNSVGPQPTQYHSD*FFLENC Trigger: ACAGTTCTCCAGGAAGAACAAGTCACTGTGATACTG...GGTTGGCTGGGGGCCGACACTGTTGCCCTGTTTGTCGTTGGCCTTCATATAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR TCA 72 bp | CGGCTGTTGTTGTGCATATGGCTGCTTTTTCTTATATaGAGGCCAACGACAAACAGGGCAACAGTGTCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RLLLCIWLLFLI*RPTTNRATVSA Trigger: GGCCGACACTGTTGCCCTGTTTGTCGTTGGCCTTCATATAAGAAAAAGCAGCCATATGCACAACAACAGCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR TCA 72 bp | ATGTCCAAGGTATGTACTGAGAAACAGGGCTGGGTGTaGAGTGTAAAACATCCAGTCTGCCCTTACCCACGA | + |
|
Preference number: 3 (lower is better) Translates to: MSKVCTEKQGWV*SVKHPVCPYPR Trigger: TCGTGGGTAAGGGCAGACTGGATGTTTTACACTTCACACCCAGCCCTGTTTCTCAGTACATACCTTGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR GCA 72 bp | GTGATCCATACGACCTCCTCTTCCTTTCACATGGGCTaGTCTCACATTTATTGGCACATGAACAAGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VIHTTSSSFHMG*SHIYWHMNKPQ Trigger: CTGAGGCTTGTTCATGTGCCAATAAATGTGAGAGCAGCCCATGTGAAAGGAAGAGGAGGTCGTATGGATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR TCA 72 bp | AGCCTCTCCTTCTGCAGTACCTGTAAGAGAGTGAACTaGATGAACAGCGAGGCTGTTGAACAACTTACGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SLSFCSTCKRVN*MNSEAVEQLTF Trigger: GAACGTAAGTTGTTCAACAGCCTCGCTGTTCATTCAGTTCACTCTCTTACAGGTACTGCAGAAGGAGAGGCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR TCA 72 bp | CCTTTCACATGGGCTGCTCTCACATTTATTGGCACATaGACAAGCCTCAGTATCACAGTGACTTGTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PFTWAALTFIGT*TSLSITVTCSS Trigger: GGAAGAACAAGTCACTGTGATACTGAGGCTTGTTCATGTGCCAATAAATGTGAGAGCAGCCCATGTGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR CCA 72 bp | TCCTCTTCCTTTCACATGGGCTGCTCTCACATTTATTaGCACATGAACAAGCCTCAGTATCACAGTGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSSFHMGCSHIY*HMNKPQYHSDL Trigger: CAAGTCACTGTGATACTGAGGCTTGTTCATGTGCCAATAAATGTGAGAGCAGCCCATGTGAAAGGAAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTACCCACGAAGCCAGTGTGGTTGTATTAGAATACCGCAGCAATCTTAAACTAAGAACCACAAATCGCTaGATGGTTGCTCCTTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LTHEASVVVLEYRSNLKLRTTNR*MVAPCV Trigger: TACACAAGGAGCAACCATCAAGCGATTTGTGGTTCT...TAGTTTAAGATTGCTGCGGTATTCTAATACAACCACACTGGCTTCGTGGGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR TCA 72 bp | TCAGGTTGTAATGAGCGCAGAAATGAATCCATGGCCTaGAGGGATATAAATTCACCTGTGTGGTTTCCGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SGCNERRNESMA*RDINSPVWFPY Trigger: ATACGGAAACCACACAGGTGAATTTATATCCCTTCAGGCCATGGATTCATTTCTGCGCTCATTACAACCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR TCA 72 bp | AGTAATCAATTAGCAAACCATGTCCAAGGTATGTACTaGGAAACAGGGCTGGGTGTGAAGTGTAAAACATCC | + |
|
Preference number: 3 (lower is better) Translates to: SNQLANHVQGMY*ETGLGVKCKTS Trigger: GGATGTTTTACACTTCACACCCAGCCCTGTTTCTCAGTACATACCTTGGACATGGTTTGCTAATTGATTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR TCA 72 bp | AGGACACATTGCACATGGTTAAGATGGAACATCATTTaGCAACGGCTGTTGTTGTGCATATGGCTGCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RTHCTWLRWNII*QRLLLCIWLLF Trigger: AAAAAGCAGCCATATGCACAACAACAGCCGTTGTCAAATGATGTTCCATCTTAACCATGTGCAATGTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATACTTAATGCAGAGAAGAAAGCTGGCGGTTGGTCAAGGTTTGCAAATAGGTTTTAGATGTACTTGTTaGTGGCACAGACATGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: LYLMQRRKLAVGQGLQIGFRCTC*WHRHDE Trigger: CTCATCATGTCTGTGCCACAAACAAGTACATCTAAA...ACCTATTTGCAAACCTTGACCAACCGCCAGCTTTCTTCTCTGCATTAAGTATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGTGCTCTACTTCAATCTaGCGTCCACTGTACTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VSEHTLFNQEVLDRDCKKCSTSI*RPLYSL Trigger: TAAAGAGTACAGTGGACGCAAGATTGAAGTAGAGCA...CTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAATTAGTATGCATTCAATaGACACACAAGGCAACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: HVSEHTLFNQEVLDRDCKLVCIQ*THKATK Trigger: TTTGGTTGCCTTGTGTGTCAATTGAATGCATACTAA...TTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 |
||
| 3UTR CCA 72 bp | TCCACATTATATATAGTTTTGATCCGAGAAGCTGCATaGGCAGTTATCCACTTAAAAATGTGCTCTACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: STLYIVLIREAA*AVIHLKMCSTS Trigger: TGAAGTAGAGCACATTTTTAAGTGGATAACTGCCCATGCAGCTTCTCGGATCAAAACTATATATAATGTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR GCA 90 bp | TCTTATATGAAGGCCAACGACAAACAGGGCAACAGTGTCGGCCCCCAGCCAACCAGAAACAGACTCAGATaGCTCTTCTTCCTTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SYMKANDKQGNSVGPQPTRNRLR*LFFLKS Trigger: GCTCTTAAGGAAGAAGAGGCATCTGAGTCTGTTTCT...GGTTGGCTGGGGGCCGACACTGTTGCCCTGTTTGTCGTTGGCCTTCATATAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGTCCGGTTCCATATCTTCATCAGTATTATGTGATCCATACGACCTCCTCTACCGGATCCACCAGCTaGGTAGCAAAGATGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSPVPYLHQYYVIHTTSSTGSTS*VAKMPV Trigger: GACTGGCATCTTTGCTACTCAGCTGGTGGATCCGGT...AGAGGAGGTCGTATGGATCACATAATACTGATGAAGATATGGAACCGGACTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGTCCGGTTCCATATCTTCATCAGTATTATGTGATCCATACGACCTCCTCTTTCCATCAAGTCACCTaGCTTCTCCACCAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TSPVPYLHQYYVIHTTSSFHQVT*LLHQLP Trigger: CGGGAGCTGGTGGAGAAGTCAGGTGACTTGATGGAA...AGAGGAGGTCGTATGGATCACATAATACTGATGAAGATATGGAACCGGACTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGCAAACCATGTCCAAGGTATGTACTGAGAAACAGGGCTGGGTGTGAAGTGTGGTCTTCAGCTTCTTaGAGCTCAATGCCACCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISKPCPRYVLRNRAGCEVWSSAS*SSMPPD Trigger: ATCCGGTGGCATTGAGCTTCAAGAAGCTGAAGACCA...CACTTCACACCCAGCCCTGTTTCTCAGTACATACCTTGGACATGGTTTGCTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR GCA 90 bp | TGCATGGGCAGTTATCCACTTAAAAATGTGCTCTACTTCAATCTTGCGTCCACTCTTCTTGAAGCTCAATaGCACCGGATCCACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CMGSYPLKNVLYFNLASTLLEAQ*HRIHQL Trigger: CAGCTGGTGGATCCGGTGGCATTGAGCTTCAAGAAG...AGTGGACGCAAGATTGAAGTAGAGCACATTTTTAAGTGGATAACTGCCCATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR TCA 90 bp | TATTATGTGATCCATACGACCTCCTCTTCCTTTCACATGGGCTGCTCTCACATTTCATTTGCTATGACCTaGACCAGCCAGATGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: YYVIHTTSSSFHMGCSHISFAMT*TSQMPS Trigger: AGATGGCATCTGGCTGGTTCAGGTCATAGCAAATGA...AATGTGAGAGCAGCCCATGTGAAAGGAAGAGGAGGTCGTATGGATCACATAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR CCA 90 bp | TTCATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAGGTGGAAGAGGTAGCTaGTGTACCAGTCCCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FMSQSIHYLTKRCWTEIVGGRGS*CTSPTD Trigger: GTCTGTGGGACTGGTACACCAGCTACCTCTTCCACC...TACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGGCTTCTTGAAGCTCAATaGCACCGGATCCACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQSIHYLTKRCWTEIVKRLLEAQ*HRIHQL Trigger: CAGCTGGTGGATCCGGTGGCATTGAGCTTCAAGAAG...CCTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 |
||
| CDS-3UTR GCA 90 bp | TATTATGTGATCCATACGACCTCCTCTTCCTTTCACATGGGCTGCTCTCACATTAGGACTTCTGTCATTTaGTATGACCTGAACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YYVIHTTSSSFHMGCSHIRTSVI*YDLNQP Trigger: TGGCTGGTTCAGGTCATAGCAAATGACAGAAGTCCT...AATGTGAGAGCAGCCCATGTGAAAGGAAGAGGAGGTCGTATGGATCACATAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR GCA 90 bp | CATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAACACATTCAGTACAGTaGAGCGTACCCGCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HVSEHTLFNQEVLDRDCKTHSVQ*SVPAGQ Trigger: TTGGCCTGCGGGTACGCTGCACTGTACTGAATGTGT...TTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR TCA 90 bp | TTAAAAAGGCAAGCTGTAAGATACTCAAAGCTTATTAAGGACACATTGCACATGACCGGATCCACCAGCTaGGTAGCAAAGATGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKRQAVRYSKLIKDTLHMTGSTS*VAKMPV Trigger: GACTGGCATCTTTGCTACTCAGCTGGTGGATCCGGT...CATGTGCAATGTGTCCTTAATAAGCTTTGAGTATCTTACAGCTTGCCTTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCAACCGGATCCACCAGCTaGGTAGCAAAGATGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSTGSTS*VAKMPV Trigger: GACTGGCATCTTTGCTACTCAGCTGGTGGATCCGGT...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | TCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGGTGGTCTTCAGCTTCTTaGAGCTCAATGCCACCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQSIHYLTKRCWTEIVKRWSSAS*SSMPPD Trigger: ATCCGGTGGCATTGAGCTTCAAGAAGCTGAAGACCA...CCTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCATTCCATCAAGTCACCTaGCTTCTCCACCAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSFHQVT*LLHQLP Trigger: CGGGAGCTGGTGGAGAAGTCAGGTGACTTGATGGAA...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | AACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTGCTTCCATCAAGTCACCTaGCTTCTCCACCAGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NQINSVINISIMCISCHCFHQVT*LLHQLP Trigger: CGGGAGCTGGTGGAGAAGTCAGGTGACTTGATGGAA...GCAGTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR GCA 90 bp | GGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACACACATTCAGTACAGTaGAGCGTACCCGCAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GNQINSVINISIMCISCHTHSVQ*SVPAGQ Trigger: TTGGCCTGCGGGTACGCTGCACTGTACTGAATGTGT...GTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CCA 90 bp | TCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGGTGCAGAGAAGAAAGCTaGCGGTTGGTCAAGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQSIHYLTKRCWTEIVKRCREES*RLVKVC Trigger: GCAAACCTTGACCAACCGCCAGCTTTCTTCTCTGCA...CCTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR CCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCAGGTGGAAGAGGTAGCTaGTGTACCAGTCCCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSGGRGS*CTSPTD Trigger: GTCTGTGGGACTGGTACACCAGCTACCTCTTCCACC...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| 3UTR CAA 72 bp | TATTGGCACATGAACAAGCCTCAGTATCACAGTGACTaGTTCTTCCTGGAGAACTGTGAACAACGCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YWHMNKPQYHSD*FFLENCEQRFV Trigger: AACAAAGCGTTGTTCACAGTTCTCCAGGAAGAACAAGTCACTGTGATACTGAGGCTTGTTCATGTGCCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR TCA 90 bp | CATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAATTCTGTCATTTGCTATaGCCTGAACCAGCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HVSEHTLFNQEVLDRDCKFCHLL*PEPARC Trigger: GCATCTGGCTGGTTCAGGTCATAGCAAATGACAGAA...TTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGGGATCACTGGAACAGTTaGAAGTGCCTGTCCGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: SQSIHYLTKRCWTEIVKRDHWNS*KCLSVF Trigger: GAATACGGACAGGCACTTTCAACTGTTCCAGTGATC...CCTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTTCTTGAAGCTCAATaGCACCGGATCCACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSLLEAQ*HRIHQL Trigger: CAGCTGGTGGATCCGGTGGCATTGAGCTTCAAGAAG...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR GCA 90 bp | GGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACGTAAAACATCCAGTCTaGCCTTACCCACGAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNQINSVINISIMCISCHVKHPV*PYPRSQ Trigger: CTGGCTTCGTGGGTAAGGGCAGACTGGATGTTTTAC...GTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| 3UTR CAA 72 bp | AAGGACACATTGCACATGGTTAAGATGGAACATCATTaGACAACGGCTGTTGTTGTGCATATGGCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KDTLHMVKMEHH*TTAVVVHMAAF Trigger: AAAAGCAGCCATATGCACAACAACAGCCGTTGTCAAATGATGTTCCATCTTAACCATGTGCAATGTGTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR TCA 90 bp | TTCATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTATCTACAGGAAAGTTCTaGAAAGAAGCAATCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FMSQSIHYLTKRCWTEIVSTGKF*KEAIGW Trigger: CCACCCGATTGCTTCTTTTCAGAACTTTCCTGTAGA...TACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGGAGGACTTCTGTCATTTaGTATGACCTGAACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQSIHYLTKRCWTEIVKRRTSVI*YDLNQP Trigger: TGGCTGGTTCAGGTCATAGCAAATGACAGAAGTCCT...CCTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAAAGGCAAGCTGTAAGATACTCAAAGCTTATTAAGGACACATTGCACATGGTAAAACATCCAGTCTaGCCTTACCCACGAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKRQAVRYSKLIKDTLHMVKHPV*PYPRSQ Trigger: CTGGCTTCGTGGGTAAGGGCAGACTGGATGTTTTAC...CATGTGCAATGTGTCCTTAATAAGCTTTGAGTATCTTACAGCTTGCCTTTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CCA 90 bp | TTCATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAGAAAGCTGGCGGTTaGTCAAGGTTTGCAAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: FMSQSIHYLTKRCWTEIVKKAGG*SRFANR Trigger: CCTATTTGCAAACCTTGACCAACCGCCAGCTTTCTT...TACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR CCA 90 bp | TTAAAAAGGCAAGCTGTAAGATACTCAAAGCTTATTAAGGACACATTGCACATGTGCAGAGAAGAAAGCTaGCGGTTGGTCAAGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKRQAVRYSKLIKDTLHMCREES*RLVKVC Trigger: GCAAACCTTGACCAACCGCCAGCTTTCTTCTCTGCA...CATGTGCAATGTGTCCTTAATAAGCTTTGAGTATCTTACAGCTTGCCTTTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | TGTTTTAATTTCATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACATCATTTGCTATGACCTaGACCAGCCAGATGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CFNFMSQSIHYLTKRCWTSFAMT*TSQMPS Trigger: AGATGGCATCTGGCTGGTTCAGGTCATAGCAAATGA...TGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATGAAATTAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 |
||
| CDS-3UTR TCA 90 bp | AACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTGCTCATTTGCTATGACCTaGACCAGCCAGATGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: NQINSVINISIMCISCHCSFAMT*TSQMPS Trigger: AGATGGCATCTGGCTGGTTCAGGTCATAGCAAATGA...GCAGTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | AACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTGCTTCTGTCATTTGCTATaGCCTGAACCAGCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NQINSVINISIMCISCHCFCHLL*PEPARC Trigger: GCATCTGGCTGGTTCAGGTCATAGCAAATGACAGAA...GCAGTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCAGATCACTGGAACAGTTaGAAGTGCCTGTCCGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSDHWNS*KCLSVF Trigger: GAATACGGACAGGCACTTTCAACTGTTCCAGTGATC...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | TTAAAAAGGCAAGCTGTAAGATACTCAAAGCTTATTAAGGACACATTGCACATGGATCACTGGAACAGTTaGAAGTGCCTGTCCGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LKRQAVRYSKLIKDTLHMDHWNS*KCLSVF Trigger: GAATACGGACAGGCACTTTCAACTGTTCCAGTGATC...CATGTGCAATGTGTCCTTAATAAGCTTTGAGTATCTTACAGCTTGCCTTTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | TGTTTTAATTTCATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAAAACAGGGCTGGGTGTaGAGTGTAAAACATCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CFNFMSQSIHYLTKRCWTKQGWV*SVKHPV Trigger: GACTGGATGTTTTACACTTCACACCCAGCCCTGTTT...TGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATGAAATTAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR TCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCAAAACAGGGCTGGGTGTaGAGTGTAAAACATCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSKQGWV*SVKHPV Trigger: GACTGGATGTTTTACACTTCACACCCAGCCCTGTTT...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | GAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGGGAGAAGTCTTGAGAACTCTCTaGCATTTCTTCTTCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: EHTLFNQEVLDRDCKKGEVLRTL*HFFFRL Trigger: CAGTCTGAAGAAGAAATGTCAGAGAGTTCTCAAGAC...TTCTCCCTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGGAGAAACAGACTCAGATaGCTCTTCTTCCTTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQSIHYLTKRCWTEIVKRRNRLR*LFFLKS Trigger: GCTCTTAAGGAAGAAGAGGCATCTGAGTCTGTTTCT...CCTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 |
||
| CDS-3UTR CCA 90 bp | CATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAACCATTTTCTCCCAGTaGATTTTACCCACCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HVSEHTLFNQEVLDRDCKTIFSQ*ILPTKG Trigger: TCCTTTGGTGGGTAAAATCCACTGGGAGAAAATGGT...TTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 |
||
| CDS-3UTR CCA 90 bp | GGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACGTGACTTGTTCTTCCTaGAGAACTGTGAACAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNQINSVINISIMCISCHVTCSS*RTVNNA Trigger: AGCGTTGTTCACAGTTCTCCAGGAAGAACAAGTCAC...GTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CCA 90 bp | TTCATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTATGCTCTCACATTTATTaGCACATGAACAAGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FMSQSIHYLTKRCWTEIVCSHIY*HMNKPQ Trigger: CTGAGGCTTGTTCATGTGCCAATAAATGTGAGAGCA...TACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| 3UTR CAA 72 bp | GCAGTTATCCACTTAAAAATGTGCTCTACTTCAATCTaGCGTCCACTGTACTCTTTAAGCATGACTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVIHLKMCSTSI*RPLYSLSMTFP Trigger: AGGGAAAGTCATGCTTAAAGAGTACAGTGGACGCAAGATTGAAGTAGAGCACATTTTTAAGTGGATAACTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCATCTACAGGAAAGTTCTaGAAAGAAGCAATCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSSTGKF*KEAIGW Trigger: CCACCCGATTGCTTCTTTTCAGAACTTTCCTGTAGA...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | GAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGGGAGAAACATTTATTGGCACATaGACAAGCCTCAGTATCACA | + |
|
Preference number: 4 (lower is better) Translates to: EHTLFNQEVLDRDCKKGETFIGT*TSLSIT Trigger: TGTGATACTGAGGCTTGTTCATGTGCCAATAAATGT...TTCTCCCTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR GCA 90 bp | AACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTGCAGGACTTCTGTCATTTaGTATGACCTGAACCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQINSVINISIMCISCHCRTSVI*YDLNQP Trigger: TGGCTGGTTCAGGTCATAGCAAATGACAGAAGTCCT...GCAGTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR GCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCATCCTTTCACATGGGCTaGTCTCACATTTATTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSSFHMG*SHIYWH Trigger: GTGCCAATAAATGTGAGAGCAGCCCATGTGAAAGGA...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR GCA 90 bp | TTAAAAAGGCAAGCTGTAAGATACTCAAAGCTTATTAAGGACACATTGCACATGTCCTTTCACATGGGCTaGTCTCACATTTATTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKRQAVRYSKLIKDTLHMSFHMG*SHIYWH Trigger: GTGCCAATAAATGTGAGAGCAGCCCATGTGAAAGGA...CATGTGCAATGTGTCCTTAATAAGCTTTGAGTATCTTACAGCTTGCCTTTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR GCA 90 bp | GGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACCAACGGCTGTTGTTGTaGATATGGCTGCTTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNQINSVINISIMCISCHQRLLL*IWLLFL Trigger: AAGAAAAAGCAGCCATATGCACAACAACAGCCGTTG...GTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CCA 90 bp | GGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACACCATTTTCTCCCAGTaGATTTTACCCACCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNQINSVINISIMCISCHTIFSQ*ILPTKG Trigger: TCCTTTGGTGGGTAAAATCCACTGGGAGAAAATGGT...GTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR CCA 90 bp | AACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTGCGTGACTTGTTCTTCCTaGAGAACTGTGAACAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: NQINSVINISIMCISCHCVTCSS*RTVNNA Trigger: AGCGTTGTTCACAGTTCTCCAGGAAGAACAAGTCAC...GCAGTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| 3UTR CAA 72 bp | CATTCTTCCTTCAAATGCTCCACATTATATATAGTTTaGATCCGAGAAGCTGCATGGGCAGTTATCCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: HSSFKCSTLYIV*IREAAWAVIHL Trigger: TAAGTGGATAACTGCCCATGCAGCTTCTCGGATCAAAACTATATATAATGTGGAGCATTTGAAGGAAGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| 3UTR CAA 72 bp | TATGTCCCTAAAGTGCTTATGAGAACCACAAATCGCTaGATGGTTGCTCCTTGTGTAATAAATAAGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: YVPKVLMRTTNR*MVAPCVINKSI Trigger: GATGGACTTATTTATTACACAAGGAGCAACCATCAAGCGATTTGTGGTTCTCATAAGCACTTTAGGGACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAAAGGCAAGCTGTAAGATACTCAAAGCTTATTAAGGACACATTGCACATGGTCTTGAGAACTCTCTaGCATTTCTTCTTCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LKRQAVRYSKLIKDTLHMVLRTL*HFFFRL Trigger: CAGTCTGAAGAAGAAATGTCAGAGAGTTCTCAAGAC...CATGTGCAATGTGTCCTTAATAAGCTTTGAGTATCTTACAGCTTGCCTTTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR GCA 90 bp | CATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAATGTTGTGCATATGGCTaGTTTTTCTTATATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HVSEHTLFNQEVLDRDCKCCAYG*FFLYEG Trigger: GCCTTCATATAAGAAAAAGCAGCCATATGCACAACA...TTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR GCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACAACGGCTGTTGTTGTaGATATGGCTGCTTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSQRLLL*IWLLFL Trigger: AAGAAAAAGCAGCCATATGCACAACAACAGCCGTTG...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCAACCATTTTCTCCCAGTaGATTTTACCCACCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSTIFSQ*ILPTKG Trigger: TCCTTTGGTGGGTAAAATCCACTGGGAGAAAATGGT...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR CCA 90 bp | AACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTGCATCCGAGAAGCTGCATaGGCAGTTATCCACTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NQINSVINISIMCISCHCIREAA*AVIHLK Trigger: TTTTAAGTGGATAACTGCCCATGCAGCTTCTCGGAT...GCAGTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCATGCTCTCACATTTATTaGCACATGAACAAGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSCSHIY*HMNKPQ Trigger: CTGAGGCTTGTTCATGTGCCAATAAATGTGAGAGCA...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCAAATGAATCCATGGCCTaGAGGGATATAAATTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSNESMA*RDINSP Trigger: AGGTGAATTTATATCCCTTCAGGCCATGGATTCATT...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | AACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTGCAATGAATCCATGGCCTaGAGGGATATAAATTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NQINSVINISIMCISCHCNESMA*RDINSP Trigger: AGGTGAATTTATATCCCTTCAGGCCATGGATTCATT...GCAGTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCAACATTTATTGGCACATaGACAAGCCTCAGTATCACA | + |
|
Preference number: 4 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSTFIGT*TSLSIT Trigger: TGTGATACTGAGGCTTGTTCATGTGCCAATAAATGT...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | TTAAAAAGGCAAGCTGTAAGATACTCAAAGCTTATTAAGGACACATTGCACATGTCATTTTCAGTGTCTTaGGAACTCTCTGACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKRQAVRYSKLIKDTLHMSFSVS*ELSDIS Trigger: AGAAATGTCAGAGAGTTCTCAAGACACTGAAAATGA...CATGTGCAATGTGTCCTTAATAAGCTTTGAGTATCTTACAGCTTGCCTTTTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR TCA 90 bp | AACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTGCTCATTTTCAGTGTCTTaGGAACTCTCTGACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NQINSVINISIMCISCHCSFSVS*ELSDIS Trigger: AGAAATGTCAGAGAGTTCTCAAGACACTGAAAATGA...GCAGTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR GCA 90 bp | TTAAAAAGGCAAGCTGTAAGATACTCAAAGCTTATTAAGGACACATTGCACATGTGTTGTGCATATGGCTaGTTTTTCTTATATGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKRQAVRYSKLIKDTLHMCCAYG*FFLYEG Trigger: GCCTTCATATAAGAAAAAGCAGCCATATGCACAACA...CATGTGCAATGTGTCCTTAATAAGCTTTGAGTATCTTACAGCTTGCCTTTTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CCA 90 bp | AACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTGCTTTAATATAATCAGTTaGTATCAGAGGGTGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQINSVINISIMCISCHCFNIIS*YQRVKP Trigger: TGGCTTCACCCTCTGATACCAACTGATTATATTAAA...GCAGTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CCA 90 bp | TTAAAAAGGCAAGCTGTAAGATACTCAAAGCTTATTAAGGACACATTGCACATGTTTAATATAATCAGTTaGTATCAGAGGGTGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKRQAVRYSKLIKDTLHMFNIIS*YQRVKP Trigger: TGGCTTCACCCTCTGATACCAACTGATTATATTAAA...CATGTGCAATGTGTCCTTAATAAGCTTTGAGTATCTTACAGCTTGCCTTTTTAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS GCA 90 bp | CAGCCCTCGACACTCCAGAATGGTCTTCAGCTTCTTGAAGCTCAATaGCACCGGATCCACCAGCTGAGTAGCAAAGATGCCAGTCTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: QPSTLQNGLQLLEAQ*HRIHQLSSKDASLV Trigger: TACGAGACTGGCATCTTTGCTACTCAGCTGGTGGATCCGGTGGCATTGAGCTTCAAGAAGCTGAAGACCATTCTGGAGTGTCGAGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS TCA 90 bp | ATGGTCTTCAGCTTCTTGAAGCTCAATGCCACCGGATCCACCAGCTaGGTAGCAAAGATGCCAGTCTCGTACCACACAATGGCCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: MVFSFLKLNATGSTS*VAKMPVSYHTMASK Trigger: TTTTGAGGCCATTGTGTGGTACGAGACTGGCATCTTTGCTACTCAGCTGGTGGATCCGGTGGCATTGAGCTTCAAGAAGCTGAAGACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR CAA 90 bp | TCAGTATTATGTGATCCATACGACCTCCTCTTCCTTTCACATGGGCTGCTCTCAATGGTCTTCAGCTTCTaGAAGCTCAATGCCACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SVLCDPYDLLFLSHGLLSMVFSF*KLNATG Trigger: TCCGGTGGCATTGAGCTTCAAGAAGCTGAAGACCAT...TGAGAGCAGCCCATGTGAAAGGAAGAGGAGGTCGTATGGATCACATAATACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR CAA 90 bp | TATTATGTGATCCATACGACCTCCTCTTCCTTTCACATGGGCTGCTCTCACATTGCCAGATGCCATCTTTaGTGTCTTCCACAAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: YYVIHTTSSSFHMGCSHIARCHL*CLPQAH Trigger: ATGAGCTTGTGGAAGACACAAAAGATGGCATCTGGC...AATGTGAGAGCAGCCCATGTGAAAGGAAGAGGAGGTCGTATGGATCACATAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR CAA 90 bp | CATATGGCTGCTTTTTCTTATATGAAGGCCAACGACAAACAGGGCAACAGTGTCAAGAGAGACCAATACTaGGCAACTGTGCCAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: HMAAFSYMKANDKQGNSVKRDQY*ATVPEQ Trigger: TTGTTCTGGCACAGTTGCCAAGTATTGGTCTCTCTT...GACACTGTTGCCCTGTTTGTCGTTGGCCTTCATATAAGAAAAAGCAGCCATATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR CAA 90 bp | ACTACTAAAAGTGTCCATGTTGTCACTATCCGAGTCATTTTCAGTGTCTTGAGAGGATCACTGGAACAGTaGAAAGTGCCTGTCCGTATT | + |
|
Preference number: 5 (lower is better) Translates to: TTKSVHVVTIRVIFSVLRGSLEQ*KVPVRI Trigger: AATACGGACAGGCACTTTCAACTGTTCCAGTGATCC...TCTCAAGACACTGAAAATGACTCGGATAGTGACAACATGGACACTTTTAGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR CAA 90 bp | TGTTTTAATTTCATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAATGGTCTTCAGCTTCTaGAAGCTCAATGCCACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: CFNFMSQSIHYLTKRCWTMVFSF*KLNATG Trigger: TCCGGTGGCATTGAGCTTCAAGAAGCTGAAGACCAT...TGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATGAAATTAAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCAATGGTCTTCAGCTTCTaGAAGCTCAATGCCACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSMVFSF*KLNATG Trigger: TCCGGTGGCATTGAGCTTCAAGAAGCTGAAGACCAT...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR CAA 90 bp | TCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGGAGAACCACAAATCGCTaGATGGTTGCTCCTTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SQSIHYLTKRCWTEIVKRRTTNR*MVAPCV Trigger: TACACAAGGAGCAACCATCAAGCGATTTGTGGTTCT...CCTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR CAA 90 bp | GTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGCAGTATCACAGTGACTaGTTCTTCCTGGAGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VSEHTLFNQEVLDRDCKKQYHSD*FFLENC Trigger: ACAGTTCTCCAGGAAGAACAAGTCACTGTGATACTG...CTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR CAA 90 bp | GTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGCTGCTCTCACATTTATaGGCACATGAACAAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSEHTLFNQEVLDRDCKKLLSHL*AHEQAS Trigger: TGAGGCTTGTTCATGTGCCAATAAATGTGAGAGCAG...CTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR CAA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCAGCCAGATGCCATCTTTaGTGTCTTCCACAAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSARCHL*CLPQAH Trigger: ATGAGCTTGTGGAAGACACAAAAGATGGCATCTGGC...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR CAA 90 bp | TTAAAAAGGCAAGCTGTAAGATACTCAAAGCTTATTAAGGACACATTGCACATGGCCAGATGCCATCTTTaGTGTCTTCCACAAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LKRQAVRYSKLIKDTLHMARCHL*CLPQAH Trigger: ATGAGCTTGTGGAAGACACAAAAGATGGCATCTGGC...CATGTGCAATGTGTCCTTAATAAGCTTTGAGTATCTTACAGCTTGCCTTTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR CAA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCAGGATCACTGGAACAGTaGAAAGTGCCTGTCCGTATT | + |
|
Preference number: 5 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSGSLEQ*KVPVRI Trigger: AATACGGACAGGCACTTTCAACTGTTCCAGTGATCC...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS-3UTR CAA 90 bp | TTCATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTATGCTCTACTTCAATCTaGCGTCCACTGTACTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FMSQSIHYLTKRCWTEIVCSTSI*RPLYSL Trigger: TAAAGAGTACAGTGGACGCAAGATTGAAGTAGAGCA...TACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR CAA 90 bp | GGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACAGAACCACAAATCGCTaGATGGTTGCTCCTTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GNQINSVINISIMCISCHRTTNR*MVAPCV Trigger: TACACAAGGAGCAACCATCAAGCGATTTGTGGTTCT...GTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CAA 90 bp | TTCATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTATTTAGATGTACTTGTTaGTGGCACAGACATGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: FMSQSIHYLTKRCWTEIVFRCTC*WHRHDE Trigger: CTCATCATGTCTGTGCCACAAACAAGTACATCTAAA...TACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR CAA 90 bp | GGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTGCTCTACTTCAATCTaGCGTCCACTGTACTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GNQINSVINISIMCISCHCSTSI*RPLYSL Trigger: TAAAGAGTACAGTGGACGCAAGATTGAAGTAGAGCA...GTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CAA 90 bp | TCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGGCTAAAAGTGTCCATGTaGTCACTATCCGAGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SQSIHYLTKRCWTEIVKRLKVSM*SLSESF Trigger: AAATGACTCGGATAGTGACAACATGGACACTTTTAG...CCTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR CAA 90 bp | TTAAAAAGGCAAGCTGTAAGATACTCAAAGCTTATTAAGGACACATTGCACATGCAGTATCACAGTGACTaGTTCTTCCTGGAGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LKRQAVRYSKLIKDTLHMQYHSD*FFLENC Trigger: ACAGTTCTCCAGGAAGAACAAGTCACTGTGATACTG...CATGTGCAATGTGTCCTTAATAAGCTTTGAGTATCTTACAGCTTGCCTTTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CAA 90 bp | AACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTGCCTGCTCTCACATTTATaGGCACATGAACAAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NQINSVINISIMCISCHCLLSHL*AHEQAS Trigger: TGAGGCTTGTTCATGTGCCAATAAATGTGAGAGCAG...GCAGTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CAA 90 bp | TTCATGTCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAATTTCACCACTGAAATaGGTACTAGAAACAGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: FMSQSIHYLTKRCWTEIVISPLK*VLETDS Trigger: TGAGTCTGTTTCTAGTACCAATTTCAGTGGTGAAAT...TACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGACATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 |
||
| CDS-3UTR CAA 90 bp | TCTCAGAGCATACATTATTTAACCAAGAGGTGCTGGACAGAGATTGTAAAAAGGACATTATATATAGTTTaGATCCGAGAAGCTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SQSIHYLTKRCWTEIVKRTLYIV*IREAAW Trigger: CCATGCAGCTTCTCGGATCAAAACTATATATAATGT...CCTTTTTACAATCTCTGTCCAGCACCTCTTGGTTAAATAATGTATGCTCTGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064637.11 |
||
| CDS-3UTR CAA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCATTTAGATGTACTTGTTaGTGGCACAGACATGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSFRCTC*WHRHDE Trigger: CTCATCATGTCTGTGCCACAAACAAGTACATCTAAA...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CAA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTAAAAGTGTCCATGTaGTCACTATCCGAGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSLKVSM*SLSESF Trigger: AAATGACTCGGATAGTGACAACATGGACACTTTTAG...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CAA 90 bp | TATAAATTCACCTGTGTGGTTTCCGTATCTATAAATTCCTTCAGGAGTTCTAAGATTTCACCACTGAAATaGGTACTAGAAACAGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: YKFTCVVSVSINSFRSSKISPLK*VLETDS Trigger: TGAGTCTGTTTCTAGTACCAATTTCAGTGGTGAAAT...CTTAGAACTCCTGAAGGAATTTATAGATACGGAAACCACACAGGTGAATTTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCAACATTATATATAGTTTaGATCCGAGAAGCTGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RQPNKFCHQHQHNVYFLSTLYIV*IREAAW Trigger: CCATGCAGCTTCTCGGATCAAAACTATATATAATGT...TGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTTGCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS-3UTR CAA 90 bp | AACCAAATAAATTCTGTCATCAACATCAGCATAATGTGTATTTCCTGTCACTGCACCAGTCCCACAGACTaGATAACCATTCTAAATTAT | + |
|
Preference number: 5 (lower is better) Translates to: NQINSVINISIMCISCHCTSPTD*ITILNY Trigger: ATAATTTAGAATGGTTATCAAGTCTGTGGGACTGGT...GCAGTGACAGGAAATACACATTATGCTGATGTTGATGACAGAATTTATTTGGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS TCA 72 bp | AGCTTCTTGAAGCTCAATGCCACCGGATCCACCAGCTaGGTAGCAAAGATGCCAGTCTCGTACCACACAATG | + |
|
Preference number: 6 (lower is better) Translates to: SFLKLNATGSTS*VAKMPVSYHTM Trigger: CATTGTGTGGTACGAGACTGGCATCTTTGCTACTCAGCTGGTGGATCCGGTGGCATTGAGCTTCAAGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064637.11 ENSMUST00000114178.8 ENSMUST00000114179.3 |
||
| CDS CAA 72 bp | CCTCTCCTTCTGCAGTACCTGGGATCACTGGAACAGTaGAAAGTGCCTGTCCGTATTCCAAATCTTGACACT | + |
|
Preference number: 6 (lower is better) Translates to: PLLLQYLGSLEQ*KVPVRIPNLDT Trigger: AGTGTCAAGATTTGGAATACGGACAGGCACTTTCAACTGTTCCAGTGATCCCAGGTACTGCAGAAGGAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS TCA 72 bp | CTCTCCTTCTGCAGTACCTGGGATCACTGGAACAGTTaGAAGTGCCTGTCCGTATTCCAAATCTTGACACTT | + |
|
Preference number: 6 (lower is better) Translates to: LSFCSTWDHWNS*KCLSVFQILTL Trigger: AAGTGTCAAGATTTGGAATACGGACAGGCACTTTCAACTGTTCCAGTGATCCCAGGTACTGCAGAAGGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064637.11 ENSMUST00000114179.3 |
||
| CDS CAA 72 bp | GTAGTCGTCTTTAAATTTCTGGGATCACTGGAACAGTaGAAAGTGCCTGTCCGTATTCCAAATCTTGACACT | + |
|
Preference number: 6 (lower is better) Translates to: VVVFKFLGSLEQ*KVPVRIPNLDT Trigger: AGTGTCAAGATTTGGAATACGGACAGGCACTTTCAACTGTTCCAGTGATCCCAGAAATTTAAAGACGACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114178.8 |
||