Pregenerated sensors for RNF10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041740Ensembl transcript IDs: ENSMUST00000040555.15, ENSMUST00000112096.9, ENSMUST00000112097.8, ENSMUST00000139853.2
Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGAAGGGGAATCAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTaGAGCAGAGCAGTGCTGTCCCACTGGATGAAGGAACTTAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: KKGNQQAQPLPRRKT*SRAVLSHWMKELKG Trigger: GCCCTTAAGTTCCTTCATCCAGTGGGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTGATTCCCCTTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| 3UTR TCA 90 bp | TTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCACTGGATaGAGGAACTTAAGGGCTACAAATGAATATGCTTGTCGGGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: FPGEKPAAEQCCPTG*RNLRATNEYACREG Trigger: GCCTTCCCGACAAGCATATTCATTTGTAGCCCTTAAGTTCCTTCATCCAGTGGGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGAAAGGGCCAAACCTCTCTTGGTAAGAAGGGGAATCAACAGGCACAGCCTCCCCAGGAGAAAAACCTaGAGCAGAGCAGTGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: CERAKPLLVRRGINRHSLPRRKT*SRAVLS Trigger: GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGG...GAGGCTGTGCCTGTTGATTCCCCTTCTTACCAAGAGAGGTTTGGCCCTTTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTGCCAACAGACAGGCATaGAAACACCCTTTCGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTANRQA*KHPFGG Trigger: GCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGC...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| 3UTR-3UTR TCA 90 bp | AACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCCTTAAGGGCTACAAATaGATATGCTTGTCGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: NRHSLFPGEKPAAEQCCPLKGYK*ICLSGR Trigger: CCTTCCCGACAAGCATATTCATTTGTAGCCCTTAAG...GGGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| 3UTR-3UTR TCA 90 bp | TGTAGAGTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCTGCTGTCCCACTGGATaGAGGAACTTAAGGGCTACA | + |
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Preference number: 2 (lower is better) Translates to: CRVTPVAGANRQACKHPFCCPTG*RNLRAT Trigger: TGTAGCCCTTAAGTTCCTTCATCCAGTGGGACAGCA...GAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCACTCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| 3UTR-3UTR CCA 90 bp | CAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCGTCAATACTTTATTCTaGTGTAAAGAGGGGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: QQAQPLPRRKTCSRAVLSVNTLF*CKEGKL Trigger: CAGCTTCCCCTCTTTACACCAGAATAAAGTATTGAC...GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGTTGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGCAGTGCTGTCCCACTaGATGAAGGAACTTAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: KQVGLSFQLLHGGSQSNVAVLSH*MKELKG Trigger: GCCCTTAAGTTCCTTCATCCAGTGGGACAGCACTGC...TACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTCCAGTTGCAAAGAAAAAGGGGCTGTaGAAGGGCCAAACCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LPAPTRRLTIKCRVTPVAKKKGL*KGQTSL Trigger: AAGAGAGGTTTGGCCCTTTCACAGCCCCTTTTTCTT...TGCAACTGGAGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| 3UTR CCA 72 bp | GTCCCGGGTAGCTCTCTCTGCCTCCTGCCTGTCAGATaGTTTACAACTGACTCTGTCGCCTTTAAACAACGG | + |
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Preference number: 3 (lower is better) Translates to: VPGSSLCLLPVR*FTTDSVAFKQR Trigger: CCGTTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAGAGAGCTACCCGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| 3UTR GCA 72 bp | AATCAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTaGAGCAGAGCAGTGCTGTCCCACTGGATGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NQQAQPLPRRKT*SRAVLSHWMKE Trigger: TTCCTTCATCCAGTGGGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| 3UTR-3UTR CAA 90 bp | TGTAGAGTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCAGGGCCAAACCTCTCTaGGTAAGAAGGGGAATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: CRVTPVAGANRQACKHPFRAKPL*VRRGIN Trigger: GTTGATTCCCCTTCTTACCAAGAGAGGTTTGGCCCT...GAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCACTCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTTTAAGAAAAAGGGAAGGCGGCTCAAGTaGAGTGTCAATACTTTATTC | + |
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Preference number: 3 (lower is better) Translates to: QGPTDRHANTLSEAFKKKGRRLK*SVNTLF Trigger: GAATAAAGTATTGACACTCAACTTGAGCCGCCTTCC...CTTTTTCTTAAAGGCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | CAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTTTAAGGAGCGGGGCGGCTGTTaGCCTTTGCTGCTGCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: QLQGPTDRHANTLSEAFKERGGC*PLLLPE Trigger: CTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTC...CTTAAAGGCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR TCA 90 bp | GTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCAAGGCAGCGCACGTTaGCAGGGTGCAGGAACATGT | + |
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Preference number: 4 (lower is better) Translates to: VTPVAGANRQACKHPFGGQGSAR*QGAGTC Trigger: ACATGTTCCTGCACCCTGTCAACGTGCGCTGCCTTG...GCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGCGGCTGTTGCCCTTTaGTGCTGCCCGAGGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSAAVAL*CCPRRR Trigger: CCGCCTCCTCGGGCAGCAGCAAAGGGCAACAGCCGC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGAGCGGGGCGGCTGTTaGCCTTTGCTGCTGCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSERGGC*PLLLPE Trigger: CTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | AACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCGGCAGGGCTAAACTCTaGCCGCTGAGCCTCTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: NRHSLFPGEKPAAEQCCPGRAKL*PLSLCY Trigger: GTAGCAGAGGCTCAGCGGGCAGAGTTTAGCCCTGCC...GGGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | GTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCTCCAGAACTACCCGGTaGAGCACCTGCTCCTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: VTPVAGANRQACKHPFGGSRTTR*STCSFE Trigger: CTCGAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGA...GCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CCA 90 bp | GTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCAGGCGGAGGAGCTGTTaGAGCCGCTGTTCTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VTPVAGANRQACKHPFGGRRRSC*SRCSCP Trigger: TGGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCT...GCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CCA 90 bp | AACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCAAGGACTGCCCTGACTaGCAGTGGGTGACAGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: NRHSLFPGEKPAAEQCCPKDCPD*QWVTEG Trigger: CCCCTCTGTCACCCACTGCCAGTCAGGGCAGTCCTT...GGGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGTTGCCCTTTGCTGCTaGCCGAGGAGGCGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSVALCC*PRRRRS Trigger: GCTCCTCCGCCTCCTCGGGCAGCAGCAAAGGGCAAC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGCTGTTGCCCTTTGCTaGTGCCCGAGGAGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSAVALC*CPRRRR Trigger: CCTCCGCCTCCTCGGGCAGCAGCAAAGGGCAACAGC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTACCCGGTGCAGCACCTaGTCCTTCGAGGCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSTRCST*SFEASS Trigger: GCTGCTGGCCTCGAAGGAGCAGGTGCTGCACCGGGT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR GCA 90 bp | AACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCTTCTCCTCTGCCAGCTaGTGCTCCAGCGCTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: NRHSLFPGEKPAAEQCCPFSSAS*CSSAPF Trigger: GAAAGGAGCGCTGGAGCAGCAGCTGGCAGAGGAGAA...GGGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | GTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCGCACGTTGACAGGGTaGAGGAACATGTGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VTPVAGANRQACKHPFGGRTLTG*RNMCCP Trigger: TGGACAGCACATGTTCCTGCACCCTGTCAACGTGCG...GCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CCA 90 bp | CAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCGCACACCCTGCTTCCTaGGTTGGAAAGCAGACTCCG | + |
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Preference number: 4 (lower is better) Translates to: QQAQPLPRRKTCSRAVLSAHPAS*VGKQTP Trigger: CGGAGTCTGCTTTCCAACCCAGGAAGCAGGGTGTGC...GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR TCA 90 bp | CAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCTCTACCACGGTTGCTaGGATCTTCTCTGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QQAQPLPRRKTCSRAVLSLYHGC*DLLWAL Trigger: CAGAGCCCAGAGAAGATCTCAGCAACCGTGGTAGAG...GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | CAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCGGACCTCGGGATACCTaGCCTGTCTCTTGTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QQAQPLPRRKTCSRAVLSGPRDT*PVSCSP Trigger: AGGAGAACAAGAGACAGGGCAGGTATCCCGAGGTCC...GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCCCCATGGCCCTCAGTaGTGGTGGGACCCAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSPHGPQ*WWDPKQ Trigger: CTGCTTTGGGTCCCACCAGCACTGAGGGCCATGGGG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CCA 90 bp | CAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCTTAGGGCCAGAGAACTaGGCAGGGCTAAACTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QQAQPLPRRKTCSRAVLSLGPEN*AGLNSA Trigger: GGCAGAGTTTAGCCCTGCCCAGTTCTCTGGCCCTAA...GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CCA 90 bp | CAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCTCACCCACTTGGATTTaGGCAGGGCCACCAACACTC | + |
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Preference number: 4 (lower is better) Translates to: QQAQPLPRRKTCSRAVLSSPTWI*AGPPTL Trigger: GAGTGTTGGTGGCCCTGCCCAAATCCAAGTGGGTGA...GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CCA 90 bp | TGTAGAGTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAAAGCAGACTCCGTaGCCAGGGGAGCCATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CRVTPVAGANRQACKHPFGKQTP*PGEPSA Trigger: TGCTGATGGCTCCCCTGGCCACGGAGTCTGCTTTCC...GAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCACTCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CCA 90 bp | CAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCGTGATGGGCTCCTCCTaGCTCATCTCAGGACCAACA | + |
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Preference number: 4 (lower is better) Translates to: QQAQPLPRRKTCSRAVLSVMGSS*LISGPT Trigger: TGTTGGTCCTGAGATGAGCCAGGAGGAGCCCATCAC...GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTAGGGATAGGGCCCCATaGCCCTCAGTGCTGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSRDRAP*PSVLVG Trigger: TCCCACCAGCACTGAGGGCCATGGGGCCCTATCCCT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CCA 90 bp | TGTGAAAGGGCCAAACCTCTCTTGGTAAGAAGGGGAATCAACAGGCACAGCCTCAGGGATAGGGCCCCATaGCCCTCAGTGCTGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: CERAKPLLVRRGINRHSLRDRAP*PSVLVG Trigger: TCCCACCAGCACTGAGGGCCATGGGGCCCTATCCCT...GAGGCTGTGCCTGTTGATTCCCCTTCTTACCAAGAGAGGTTTGGCCCTTTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR TCA 90 bp | GTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCGAAAGAGCTCCTTGTTaGAAGGCTTGTGTCCCCACT | + |
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Preference number: 4 (lower is better) Translates to: VTPVAGANRQACKHPFGGERAPC*KACVPT Trigger: AGTGGGGACACAAGCCTTTCAACAAGGAGCTCTTTC...GCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR TCA 90 bp | TGTAGAGTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGCCTCCAGCCACTCCTaGCAGAGCTTCTTCCCGAAT | + |
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Preference number: 4 (lower is better) Translates to: CRVTPVAGANRQACKHPFASSHS*QSFFPN Trigger: ATTCGGGAAGAAGCTCTGTCAGGAGTGGCTGGAGGC...GAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCACTCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAAGTTGCCCTTTGCTGCTaGCCGAGGAGGCGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQVALCC*PRRRRS Trigger: GCTCCTCCGCCTCCTCGGGCAGCAGCAAAGGGCAAC...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAAGCTGTTGCCCTTTGCTaGTGCCCGAGGAGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQAVALC*CPRRRR Trigger: CCTCCGCCTCCTCGGGCAGCAGCAAAGGGCAACAGC...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGCAGGGCTAAACTCTaGCCGCTGAGCCTCTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSGRAKL*PLSLCY Trigger: GTAGCAGAGGCTCAGCGGGCAGAGTTTAGCCCTGCC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR GCA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAAACCCGGTGCAGCACCTaGTCCTTCGAGGCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQTRCST*SFEASS Trigger: GCTGCTGGCCTCGAAGGAGCAGGTGCTGCACCGGGT...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTCCTCTGCCAGCTGCTaGTCCAGCGCTCCTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSSSASC*SSAPFS Trigger: GGAGAAAGGAGCGCTGGAGCAGCAGCTGGCAGAGGA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR GCA 90 bp | CAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTTTAAGGAGACCACAGGAGGCTaGAGAGCCAGTTCACAGATG | + |
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Preference number: 4 (lower is better) Translates to: QLQGPTDRHANTLSEAFKETTGG*RASSQM Trigger: CATCTGTGAACTGGCTCTGCAGCCTCCTGTGGTCTC...CTTAAAGGCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCGCAGAAGGAAGGACTaGCCTGACTGGCAGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSRRRKD*PDWQWV Trigger: CACCCACTGCCAGTCAGGGCAGTCCTTCCTTCTGCG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTCGCAGAAGGAAGGACTaGCCTGACTGGCAGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTRRRKD*PDWQWV Trigger: CACCCACTGCCAGTCAGGGCAGTCCTTCCTTCTGCG...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | CAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCCACCCGTCTGCTTTTaGTTTGCCAACCCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QQAQPLPRRKTCSRAVLSPPVCF*FANPQH Trigger: ATGCTGAGGGTTGGCAAAGCAAAAGCAGACGGGTGG...GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGAAAGCAGACTCCGTaGCCAGGGGAGCCATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSGKQTP*PGEPSA Trigger: TGCTGATGGCTCCCCTGGCCACGGAGTCTGCTTTCC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTGCCCTGACTGGCAGTaGGTGACAGAGGGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSCPDWQ*VTEGSA Trigger: TGCTGACCCCTCTGTCACCCACTGCCAGTCAGGGCA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTTGCCCTGACTGGCAGTaGGTGACAGAGGGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTCPDWQ*VTEGSA Trigger: TGCTGACCCCTCTGTCACCCACTGCCAGTCAGGGCA...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTAAGGACTGCCCTGACTaGCAGTGGGTGACAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSKDCPD*QWVTEG Trigger: CCCCTCTGTCACCCACTGCCAGTCAGGGCAGTCCTT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGCCTCCAGCCACTCCTaGCAGAGCTTCTTCCCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSASSHS*QSFFPN Trigger: ATTCGGGAAGAAGCTCTGTCAGGAGTGGCTGGAGGC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCAAGGCAGCGCACGTTaGCAGGGTGCAGGAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSQGSAR*QGAGTC Trigger: ACATGTTCCTGCACCCTGTCAACGTGCGCTGCCTTG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGACGACCGAGGTGCTaGACAGCAGCTTCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSGRPRC*TAASAS Trigger: AGAAGCAGAAGCTGCTGTTCAGCACCTCGGTCGTCC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTGGACGACCGAGGTGCTaGACAGCAGCTTCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTGRPRC*TAASAS Trigger: AGAAGCAGAAGCTGCTGTTCAGCACCTCGGTCGTCC...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | CAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCAGGAGGGTTCACGCTTaGGATTGTAACGCTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QQAQPLPRRKTCSRAVLSRRVHA*DCNAWI Trigger: GATCCAAGCGTTACAATCGCAAGCGTGAACCCTCCT...GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTCCAGAACTACCCGGTaGAGCACCTGCTCCTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSSRTTR*STCSFE Trigger: CTCGAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTTCTCCTCTGCCAGCTaGTGCTCCAGCGCTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSFSSAS*CSSAPF Trigger: GAAAGGAGCGCTGGAGCAGCAGCTGGCAGAGGAGAA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGGTGCAGGAACATGTaGTGTCCATCTTCCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSGCRNM*CPSSAW Trigger: CCAGGCGGAAGATGGACAGCACATGTTCCTGCACCC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTATCTTCTCTGGGCTCTaGTCCAGGCTGCCGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSIFSGL*SRLPYS Trigger: GGAGTACGGCAGCCTGGAGCAGAGCCCAGAGAAGAT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCCTCCATCTCAATTCTaGGCTCTCGGCGACGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSPPSQF*ALGDAP Trigger: AGGAGCGTCGCCGAGAGCGCAGAATTGAGATGGAGG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTAGGCGGAGGAGCTGTTaGAGCCGCTGTTCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSRRRSC*SRCSCP Trigger: TGGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTACACCCTTCCTGGGTTaGAAAGCAGACTCCGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSTPFLG*KADSVA Trigger: GGCCACGGAGTCTGCTTTCCAACCCAGGAAGGGTGT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCCAGCACACCCTTCCTaGGTTGGAAAGCAGACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSPAHPS*VGKQTP Trigger: CGGAGTCTGCTTTCCAACCCAGGAAGGGTGTGCTGG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000139853.2 |
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| CDS-3UTR CCA 90 bp | TGTAGAGTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGTCCTCACAGGCTTCTaGCTCAGACACTGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CRVTPVAGANRQACKHPFVLTGF*LRHCFL Trigger: GAGGAAGCAGTGTCTGAGCCAGAAGCCTGTGAGGAC...GAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCACTCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTTCTCGAGGGGAATGTaGACCTCGGGATACCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSFSRGM*TSGYLP Trigger: GGGCAGGTATCCCGAGGTCCACATTCCCCTCGAGAA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGCCCTCAGTGCTGGTaGGACCCAAAGCAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSGPQCW*DPKQNQ Trigger: CTGATTCTGCTTTGGGTCCCACCAGCACTGAGGGCC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCCCTCAGCATCTGCATaGGAGCCTGGACTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSPSASA*EPGLLL Trigger: GAGCAGAAGTCCAGGCTCCCATGCAGATGCTGAGGG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139853.2 |
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| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCTAAACTCTGCCCGCTaGGCCTCTGCTACCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSLNSAR*ASATSS Trigger: AGATGAGGTAGCAGAGGCTCAGCGGGCAGAGTTTAG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR TCA 90 bp | CAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTTTAAGAAAAAGCTAAACTCTGCCCGCTaGGCCTCTGCTACCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QGPTDRHANTLSEAFKKKLNSAR*ASATSS Trigger: AGATGAGGTAGCAGAGGCTCAGCGGGCAGAGTTTAG...CTTTTTCTTAAAGGCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCTCTACCACGGTTGCTaGGATCTTCTCTGGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSLYHGC*DLLWAL Trigger: CAGAGCCCAGAGAAGATCTCAGCAACCGTGGTAGAG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCGCACGTTGACAGGGTaGAGGAACATGTGCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSRTLTG*RNMCCP Trigger: TGGACAGCACATGTTCCTGCACCCTGTCAACGTGCG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGAGACCACAGGAGGCTaGAGAGCCAGTTCACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSETTGG*RASSQM Trigger: CATCTGTGAACTGGCTCTGCAGCCTCCTGTGGTCTC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGACCTCGGGATACCTaGCCTGTCTCTTGTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSGPRDT*PVSCSP Trigger: AGGAGAACAAGAGACAGGGCAGGTATCCCGAGGTCC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGGAGCCTGGACTTCTaGTCAGAGGAGACAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSGSLDF*SEETGI Trigger: TATCCCTGTCTCCTCTGAGCAGAAGTCCAGGCTCCC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTTTAAGAAAAAGGGGAGCCTGGACTTCTaGTCAGAGGAGACAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: QGPTDRHANTLSEAFKKKGSLDF*SEETGI Trigger: TATCCCTGTCTCCTCTGAGCAGAAGTCCAGGCTCCC...CTTTTTCTTAAAGGCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | GTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTGAACAGCAGCTTCTaGTTCTGTCTCTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTPVAGANRQACKHPFGGLNSSF*FCLFLF Trigger: GAAAAGGAAGAGACAGAAGCAGAAGCTGCTGTTCAG...GCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCCAACCCTCAGCATCTaGATGGGAGCCTGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSPTLSI*MGAWTS Trigger: AGAAGTCCAGGCTCCCATGCAGATGCTGAGGGTTGG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTTAGGGCCAGAGAACTaGGCAGGGCTAAACTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSLGPEN*AGLNSA Trigger: GGCAGAGTTTAGCCCTGCCCAGTTCTCTGGCCCTAA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | AACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCCCACAAATTGGCAGTTaGCCTGTAGAAAGAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRHSLFPGEKPAAEQCCPPQIGS*PVERAP Trigger: AGGAGCTCTTTCTACAGGCCAACTGCCAATTTGTGG...GGGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | CAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCAAGATGGCACTTCATaGCTACAGATGCGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QQAQPLPRRKTCSRAVLSQDGTS*LQMRTC Trigger: ACAAGTGCGCATCTGTAGCCATGAAGTGCCATCTTG...GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTCACCCACTTGGATTTaGGCAGGGCCACCAACACTC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSSPTWI*AGPPTL Trigger: GAGTGTTGGTGGCCCTGCCCAAATCCAAGTGGGTGA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | TGTAGAGTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCCTACATTCACCCACTTaGATTTGGGCAGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CRVTPVAGANRQACKHPFLHSPT*IWAGPP Trigger: TGGTGGCCCTGCCCAAATCCAAGTGGGTGAATGTAG...GAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCACTCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCGAATCTTGACCTCCTaGATAGCAGCCTCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTPVAGANRQACKHPFGGRILTS*IAASMK Trigger: TTTCATTGAGGCTGCTATCCAGGAGGTCAAGATTCG...GCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGTCCTCACAGGCTTCTaGCTCAGACACTGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSVLTGF*LRHCFL Trigger: GAGGAAGCAGTGTCTGAGCCAGAAGCCTGTGAGGAC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGTGATGGGCTCCTCCTaGCTCATCTCAGGACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSVMGSS*LISGPT Trigger: TGTTGGTCCTGAGATGAGCCAGGAGGAGCCCATCAC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTCCAGTTGCAGGCCCTCAGTGCTGGTaGGACCCAAAGCAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPAPTRRLTIKCRVTPVAGPQCW*DPKQNQ Trigger: CTGATTCTGCTTTGGGTCCCACCAGCACTGAGGGCC...TGCAACTGGAGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCATGGCCCTCAGTGCTaGTGGGACCCAAAGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSHGPQC*WDPKQN Trigger: ATTCTGCTTTGGGTCCCACCAGCACTGAGGGCCATG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTCATGGCCCTCAGTGCTaGTGGGACCCAAAGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTHGPQC*WDPKQN Trigger: ATTCTGCTTTGGGTCCCACCAGCACTGAGGGCCATG...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGTCTGCATGGGAGCCTaGACTTCTGCTCAGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSVCMGA*TSAQRR Trigger: TCTCCTCTGAGCAGAAGTCCAGGCTCCCATGCAGAC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAGTTGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTACCCTGCTTCCTGGGTTaGAAAGCAGACTCCGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQVGLSFQLLHGGSQSNVPCFLG*KADSVA Trigger: GGCCACGGAGTCTGCTTTCCAACCCAGGAAGCAGGG...TACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| 3UTR CAA 72 bp | ACTCTGTCGCCTTTAAACAACGGGCACTTAAACAAGTaGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLSPLNNGHLNK*GSASSSYTEAH Trigger: GTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTTAAGTGCCCGTTGTTTAAAGGCGACAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCTGCCACCGCCCCTTTaGGGAGGCATCTTGTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSLPPPL*GGILLK Trigger: TTTTAACAAGATGCCTCCTCAAAGGGGCGGTGGCAG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCCACAAAGTCCCAGTTaGCTAAGGTGTCAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSPQSPS*LRCQGQ Trigger: CTGACCCTGACACCTTAGTCAACTGGGACTTTGTGG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTCCACAAAGTCCCAGTTaGCTAAGGTGTCAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTPQSPS*LRCQGQ Trigger: CTGACCCTGACACCTTAGTCAACTGGGACTTTGTGG...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGCTTGGAATACTGGCTaGGCTGCTCATCTCCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSAWNTG*AAHLLG Trigger: ACCTAGGAGATGAGCAGCTCAGCCAGTATTCCAAGC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR TCA 90 bp | CAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTTTAAGGACAGGTATAGGAATTaGAGGCCGGAAACTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QLQGPTDRHANTLSEAFKDRYRN*RPETAV Trigger: TACAGCAGTTTCCGGCCTTCAATTCCTATACCTGTC...CTTAAAGGCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGCCTTCAAAGTGACCTaGCTGGCCACGTGGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSAFKVT*LATWFK Trigger: TTTGAACCACGTGGCCAGGCAGGTCACTTTGAAGGC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAAGGGTGCAGGAACATGTaGTGTCCATCTTCCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQGCRNM*CPSSAW Trigger: CCAGGCGGAAGATGGACAGCACATGTTCCTGCACCC...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAAATCTTCTCTGGGCTCTaGTCCAGGCTGCCGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQIFSGL*SRLPYS Trigger: GGAGTACGGCAGCCTGGAGCAGAGCCCAGAGAAGAT...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAACCTCCATCTCAATTCTaGGCTCTCGGCGACGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQPPSQF*ALGDAP Trigger: AGGAGCGTCGCCGAGAGCGCAGAATTGAGATGGAGG...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTTGAAGGCCGGAAACTaGTGTAGGTTCTCGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSLKAGN*CRFSRG Trigger: TCCCCTCGAGAACCTACAGCAGTTTCCGGCCTTCAA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTTTGAAGGCCGGAAACTaGTGTAGGTTCTCGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTLKAGN*CRFSRG Trigger: TCCCCTCGAGAACCTACAGCAGTTTCCGGCCTTCAA...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGTCAGCAGAAAGTCTaGATGGGAGCCTGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSGQQKV*MGAWTS Trigger: AGAAGTCCAGGCTCCCATGCAGACTTTCTGCTGACC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTGGTCAGCAGAAAGTCTaGATGGGAGCCTGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTGQQKV*MGAWTS Trigger: AGAAGTCCAGGCTCCCATGCAGACTTTCTGCTGACC...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCGTCTGCTTTTGCTTTaGCAACCCTCAGCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSRLLLL*QPSASG Trigger: CCCAGATGCTGAGGGTTGGCAAAGCAAAAGCAGACG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCCACCCGTCTGCTTTTaGTTTGCCAACCCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSPPVCF*FANPQH Trigger: ATGCTGAGGGTTGGCAAAGCAAAAGCAGACGGGTGG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTTTGGGCCACCCGTCTaGTTTTGCTTTGCCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSFGPPV*FCFANP Trigger: AGGGTTGGCAAAGCAAAAGCAGACGGGTGGCCCAAA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTTTTGGGCCACCCGTCTaGTTTTGCTTTGCCAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTFGPPV*FCFANP Trigger: AGGGTTGGCAAAGCAAAAGCAGACGGGTGGCCCAAA...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | AACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCGCATATTGGGCAAGATaGCACTTCATGGCTACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NRHSLFPGEKPAAEQCCPAYWAR*HFMATD Trigger: ATCTGTAGCCATGAAGTGCCATCTTGCCCAATATGC...GGGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | AACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCTGGATAGAGGCATATTaGGCAAGATGGCACTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: NRHSLFPGEKPAAEQCCPWIEAY*ARWHFM Trigger: CATGAAGTGCCATCTTGCCCAATATGCCTCTATCCA...GGGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCTTGGCCGCAGTAGGTaGATAGAGGCATATTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSLGRSR*IEAYWA Trigger: TGCCCAATATGCCTCTATCCACCTACTGCGGCCAAG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTTTAAGCAGAGCTGTAGCAGATaGGACATTTGCTCCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLQGPTDRHANTLSEAFKQSCSR*DICSRF Trigger: AAACCTGGAGCAAATGTCCCATCTGCTACAGCTCTG...CTTAAAGGCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCTACATTCACCCACTTaGATTTGGGCAGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSLHSPT*IWAGPP Trigger: TGGTGGCCCTGCCCAAATCCAAGTGGGTGAATGTAG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAATTCTCGAGGGGAATGTaGACCTCGGGATACCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQFSRGM*TSGYLP Trigger: GGGCAGGTATCCCGAGGTCCACATTCCCCTCGAGAA...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCCAACCCTCAGCATCTaGGCAAAGGAAAGGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSPTLSI*AKERKG Trigger: TCCCTTCCTTTCCTTTGCCCAGATGCTGAGGGTTGG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTATCTGCATGGGAGCCTaGACTTCTGCTCAGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSICMGA*TSAQRR Trigger: TCTCCTCTGAGCAGAAGTCCAGGCTCCCATGCAGAT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139853.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGAAAGAGCTCCTTGTTaGAAGGCTTGTGTCCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSERAPC*KACVPT Trigger: AGTGGGGACACAAGCCTTTCAACAAGGAGCTCTTTC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTAGGAGGGTTCACGCTTaGGATTGTAACGCTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSRRVHA*DCNAWI Trigger: GATCCAAGCGTTACAATCGCAAGCGTGAACCCTCCT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGAGTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCATAGTGCAGGATGCATaGCCAGCAGAAAATGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CRVTPVAGANRQACKHPFIVQDA*PAENVS Trigger: GGACACATTTTCTGCTGGGCATGCATCCTGCACTAT...GAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCACTCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | GTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCAGAGAACAAACTTGTaGAGCTTCATCATCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTPVAGANRQACKHPFGGQRTNL*SFIIKS Trigger: GCTTTTGATGATGAAGCTGCACAAGTTTGTTCTCTG...GCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTCCAGTTGCACGTCTGCTTTTGCTTTaGCAACCCTCAGCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPAPTRRLTIKCRVTPVARLLLL*QPSASG Trigger: CCCAGATGCTGAGGGTTGGCAAAGCAAAAGCAGACG...TGCAACTGGAGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTCCAGTTGCATACTCCAGCACACCCTaGTTCCTGGGTTGGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPAPTRRLTIKCRVTPVAYSSTP*FLGWKA Trigger: TGCTTTCCAACCCAGGAAGCAGGGTGTGCTGGAGTA...TGCAACTGGAGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCGTCTGCTTTTGCTTTaGCAACCCTCAGCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSRLLLL*QPSASA Trigger: TGCAGATGCTGAGGGTTGGCAAAGCAAAAGCAGACG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTGCTTTTCTGTGAATTaGAGCGACGGGACTGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSCFSVN*SDGTGC Trigger: GCAACCAGTCCCGTCGCTCCAATTCACAGAAAAGCA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTAGTTTTGCTTTTCTGTaGATTGGAGCGACGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSSFAFL*IGATGL Trigger: CAGTCCCGTCGCTCCAATTCACAGAAAAGCAAAACT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTAGTTTTGCTTTTCTGTaGATTGGAGCGACGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTSFAFL*IGATGL Trigger: CAGTCCCGTCGCTCCAATTCACAGAAAAGCAAAACT...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAAGCTTGGAATACTGGCTaGGCTGCTCATCTCCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQAWNTG*AAHLLG Trigger: ACCTAGGAGATGAGCAGCTCAGCCAGTATTCCAAGC...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGACAGGTATAGGAATTaGAGGCCGGAAACTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSDRYRN*RPETAV Trigger: TACAGCAGTTTCCGGCCTTCAATTCCTATACCTGTC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGTCAGCAAAGTGAGCTaGGTAGTCTTGGTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSVSKVS*VVLVFR Trigger: TCTGAAGACCAAGACTACGCAGCTCACTTTGCTGAC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAAAGGGCCAAACCTCTCTTGGTAAGAAGGGGAATCAACAGGCACAGCCTCGTCAGCAAAGTGAGCTaGGTAGTCTTGGTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CERAKPLLVRRGINRHSLVSKVS*VVLVFR Trigger: TCTGAAGACCAAGACTACGCAGCTCACTTTGCTGAC...GAGGCTGTGCCTGTTGATTCCCCTTCTTACCAAGAGAGGTTTGGCCCTTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTATAGTGCAGGATGCATaGCCAGCAGAAAATGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSIVQDA*PAENVS Trigger: GGACACATTTTCTGCTGGGCATGCATCCTGCACTAT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTTCTGGCTCAGACACTaGTTCCTCCTCTTCTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSFWLRH*FLLFYQ Trigger: TTGGTAGAAGAGGAGGAAGCAGTGTCTGAGCCAGAA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCCACAAATTGGCAGTTaGCCTGTAGAAAGAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSPQIGS*PVERAP Trigger: AGGAGCTCTTTCTACAGGCCAACTGCCAATTTGTGG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCAAGATGGCACTTCATaGCTACAGATGCGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSQDGTS*LQMRTC Trigger: ACAAGTGCGCATCTGTAGCCATGAAGTGCCATCTTG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAGTTGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTACTTGGCCGCAGTAGGTaGATAGAGGCATATTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQVGLSFQLLHGGSQSNVLGRSR*IEAYWA Trigger: TGCCCAATATGCCTCTATCCACCTACTGCGGCCAAG...TACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCAGAGCTGTAGCAGATaGGACATTTGCTCCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSQSCSR*DICSRF Trigger: AAACCTGGAGCAAATGTCCCATCTGCTACAGCTCTG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGAACTCACAGGTGAGTaGCAAGTGAGAGAGATACCT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSELTGE*QVREIP Trigger: AGGTATCTCTCTCACTTGCCACTCACCTGTGAGTTC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAACCAACCCTCAGCATCTaGGCAAAGGAAAGGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQPTLSI*AKERKG Trigger: TCCCTTCCTTTCCTTTGCCCAGATGCTGAGGGTTGG...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGAGTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCATTGTCATCTTTCTTTaGAGCAGTTTTGGGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: CRVTPVAGANRQACKHPFIVIFL*SSFGPP Trigger: GGGTGGCCCAAAACTGCTCCAAAGAAAGATGACAAT...GAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCACTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTAGGAATTTTGGAAACTaGGCACAGGAACACGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSRNFGN*AQEHGQ Trigger: CTGACCGTGTTCCTGTGCCCAGTTTCCAAAATTCCT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
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| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGTTTTCTCACTGAGTaGAAGATAGTGCAGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSGFLTE*KIVQDA Trigger: TGCATCCTGCACTATCTTTCACTCAGTGAGAAAACC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR TCA 90 bp | TGTGAAAGGGCCAAACCTCTCTTGGTAAGAAGGGGAATCAACAGGCACAGCCTCGGTTTTCTCACTGAGTaGAAGATAGTGCAGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CERAKPLLVRRGINRHSLGFLTE*KIVQDA Trigger: TGCATCCTGCACTATCTTTCACTCAGTGAGAAAACC...GAGGCTGTGCCTGTTGATTCCCCTTCTTACCAAGAGAGGTTTGGCCCTTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTCCAGGTTTTCTCACTaGGTGAAAGATAGTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSSRFSH*VKDSAG Trigger: TCCTGCACTATCTTTCACTCAGTGAGAAAACCTGGA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR TCA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTTCCAGGTTTTCTCACTaGGTGAAAGATAGTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTSRFSH*VKDSAG Trigger: TCCTGCACTATCTTTCACTCAGTGAGAAAACCTGGA...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTGGCAACAACACTCTTaGGATCCTTCTTATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSWQQHS*DPSYAQ Trigger: CTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR GCA 90 bp | TGTAGAGTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGAATACTGGCTGAGCTaGTCATCTCCTAGGTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: CRVTPVAGANRQACKHPFEYWLS*SSPRLI Trigger: TATTAACCTAGGAGATGAGCAGCTCAGCCAGTATTC...GAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCACTCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCTGAACAGCAGCTTCTaGTTCTGTCTCTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSLNSSF*FCLFLF Trigger: GAAAAGGAAGAGACAGAAGCAGAAGCTGCTGTTCAG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
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| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGCATATTGGGCAAGATaGCACTTCATGGCTACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSAYWAR*HFMATD Trigger: ATCTGTAGCCATGAAGTGCCATCTTGCCCAATATGC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTGGATAGAGGCATATTaGGCAAGATGGCACTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSWIEAY*ARWHFM Trigger: CATGAAGTGCCATCTTGCCCAATATGCCTCTATCCA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCGAATCTTGACCTCCTaGATAGCAGCCTCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSRILTS*IAASMK Trigger: TTTCATTGAGGCTGCTATCCAGGAGGTCAAGATTCG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CCA 90 bp | CTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTCCAGTTGCAGAACTCACAGGTGAGTaGCAAGTGAGAGAGATACCT | + |
|
Preference number: 4 (lower is better) Translates to: LPAPTRRLTIKCRVTPVAELTGE*QVREIP Trigger: AGGTATCTCTCTCACTTGCCACTCACCTGTGAGTTC...TGCAACTGGAGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTATTGTCATCTTTCTTTaGAGCAGTTTTGGGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSIVIFL*SSFGPP Trigger: GGGTGGCCCAAAACTGCTCCAAAGAAAGATGACAAT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
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| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTACGCTTGGATCCATTTaGGTTCTTTCCATCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSTLGSI*VLSITL Trigger: AAGAGTGATGGAAAGAACTCAAATGGATCCAAGCGT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGAATACTGGCTGAGCTaGTCATCTCCTAGGTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSEYWLS*SSPRLI Trigger: TATTAACCTAGGAGATGAGCAGCTCAGCCAGTATTC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR GCA 90 bp | AAACAAGTTGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTATTCTGGCTCAGACACTaGTTCCTCCTCTTCTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KQVGLSFQLLHGGSQSNVFWLRH*FLLFYQ Trigger: TTGGTAGAAGAGGAGGAAGCAGTGTCTGAGCCAGAA...TACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCCTAGGTTAATAGGATaGTCTACATTCACCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSPRLIG*STFTHL Trigger: CAAGTGGGTGAATGTAGACCATCCTATTAACCTAGG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGAACATCCTCAGACATaGAATACCCAGCAATCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSEHPQT*NTQQSL Trigger: TAGAGATTGCTGGGTATTCCATGTCTGAGGATGTTC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CCA 90 bp | AAACAAGTTGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAAGGAATTTTGGAAACTaGGCACAGGAACACGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQVGLSFQLLHGGSQSNVRNFGN*AQEHGQ Trigger: CTGACCGTGTTCCTGTGCCCAGTTTCCAAAATTCCT...TACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCACGTGGTTCAAAGGTaGAATTTAACAAGTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSHVVQR*NLTSGS Trigger: TGAACCACTTGTTAAATTTCACCTTTGAACCACGTG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAGTTGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTATGGCAACAACACTCTTaGGATCCTTCTTATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KQVGLSFQLLHGGSQSNVWQQHS*DPSYAQ Trigger: CTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCA...TACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCAGAGAACAAACTTGTaGAGCTTCATCATCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSQRTNL*SFIIKS Trigger: GCTTTTGATGATGAAGCTGCACAAGTTTGTTCTCTG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTTGGAGCGACGGGACTaGTTGCTAAAATTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: AKQKHREETRWRRRLGNSLERRD*LLKFSF Trigger: AAATGAAAATTTTAGCAACCAGTCCCGTCGCTCCAA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAGTTGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAACGCTTGGATCCATTTaGGTTCTTTCCATCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQVGLSFQLLHGGSQSNVTLGSI*VLSITL Trigger: AAGAGTGATGGAAAGAACTCAAATGGATCCAAGCGT...TACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAGTTGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTATTGGAGCGACGGGACTaGTTGCTAAAATTTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KQVGLSFQLLHGGSQSNVLERRD*LLKFSF Trigger: AAATGAAAATTTTAGCAACCAGTCCCGTCGCTCCAA...TACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS CCA 90 bp | GCGGCTGTTGCCCTTTGCTGCTGCCCGAGGAGGCGGAGGAGCTGTTaGAGCCGCTGTTCTTGTCCATGTCGGAGGCGGTGGCGGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AAVALCCCPRRRRSC*SRCSCPCRRRWRRR Trigger: GCGCCGCCGCCACCGCCTCCGACATGGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCTCCTCGGGCAGCAGCAAAGGGCAACAGCCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | GTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCGGAGCGGGGCGGCTGTaGCCCTTTGCTGCTGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: VTPVAGANRQACKHPFGGGAGRL*PFAAAR Trigger: TCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCC...GCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS TCA 90 bp | GGCTCTGCTCCAGGCTGCCGTACTCCCGCACAAGGCAGCGCACGTTaGCAGGGTGCAGGAACATGTGCTGTCCATCTTCCGCCTGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSAPGCRTPAQGSAR*QGAGTCAVHLPPGR Trigger: TCTACCAGGCGGAAGATGGACAGCACATGTTCCTGCACCCTGTCAACGTGCGCTGCCTTGTGCGGGAGTACGGCAGCCTGGAGCAGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS GCA 90 bp | TGCTCCAGCGCTCCTTTCTCCTCCAGAACTACCCGGTGCAGCACCTaGTCCTTCGAGGCCAGCAGCAGCTTGGAATACTGGCTGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSSAPFSSRTTRCST*SFEASSSLEYWLSC Trigger: GCAGCTCAGCCAGTATTCCAAGCTGCTGCTGGCCTCGAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGAGGAGAAAGGAGCGCTGGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGCGGCTGTTGCCCTTaGCTGCTGCCCGAGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSGGCCP*LLPEEA Trigger: CGCCTCCTCGGGCAGCAGCAAAGGGCAACAGCCGCC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGAGCGGGGCGGCTGTaGCCCTTTGCTGCTGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSGAGRL*PFAAAR Trigger: TCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS GCA 90 bp | CTCAGGACCAACAGTCCCCTCTCCCAGACTGTCATCGGCTACCTCTaGGTCCTCACAGGCTTCTGGCTCAGACACTGCTTCCTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRTNSPLSQTVIGYL*VLTGFWLRHCFLLF Trigger: GAAGAGGAGGAAGCAGTGTCTGAGCCAGAAGCCTGTGAGGACGCAGAGGTAGCCGATGACAGTCTGGGAGAGGGGACTGTTGGTCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS GCA 90 bp | TACCCAGCAATCTCTACCACGGTTGCTGAGATCTTCTCTGGGCTCTaGTCCAGGCTGCCGTACTCCCGCACAAGGCAGCGCACGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: YPAISTTVAEIFSGL*SRLPYSRTRQRTLT Trigger: TGTCAACGTGCGCTGCCTTGTGCGGGAGTACGGCAGCCTGGAGCAGAGCCCAGAGAAGATCTCAGCAACCGTGGTAGAGATTGCTGGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | GTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCGAAGAGCTAAAGGGTTaGCTGCTGCCACCGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VTPVAGANRQACKHPFGGEELKG*LLPPPL Trigger: AAGGGGCGGTGGCAGCAGCAAACCCTTTAGCTCTTC...GCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | GTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCTCTACATTCACCCACTaGGATTTGGGCAGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VTPVAGANRQACKHPFGGSTFTH*DLGRAT Trigger: GGTGGCCCTGCCCAAATCCAAGTGGGTGAATGTAGA...GCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS GCA 90 bp | GACTTCTGCTCAGAGGAGACAGGGATAGGGCCCCATGGCCCTCAGTaGTGGTGGGACCCAAAGCAGAATCAGAGGGACAGGTATAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: DFCSEETGIGPHGPQ*WWDPKQNQRDRYRN Trigger: ATTCCTATACCTGTCCCTCTGATTCTGCTTTGGGTCCCACCAGCACTGAGGGCCATGGGGCCCTATCCCTGTCTCCTCTGAGCAGAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGAGGCGGAGGAGCTGTaGGAGCCGCTGTTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSEAEEL*EPLFLS Trigger: GGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCTC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | CAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCTTCACCCACTTGGATTaGGGCAGGGCCACCAACACT | + |
|
Preference number: 5 (lower is better) Translates to: QQAQPLPRRKTCSRAVLSFTHLD*GRATNT Trigger: AGTGTTGGTGGCCCTGCCCAAATCCAAGTGGGTGAA...GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | AACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCCTCGCGAGCCTTCTTTaGGCGCTGACGCTTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NRHSLFPGEKPAAEQCCPLASLL*ALTLPF Trigger: AAAAGGAAGCGTCAGCGCCAAAAGAAGGCTCGCGAG...GGGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS CCA 90 bp | CTGGTAGAAGTAGTAACACGGAGAGCTGCTGAGCTGGGTGAAGCCTaGCTTAGTGATGGGCTCCTCCTGGCTCATCTCAGGACCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVEVVTRRAAELGEA*LSDGLLLAHLRTNS Trigger: ACTGTTGGTCCTGAGATGAGCCAGGAGGAGCCCATCACTAAGCCAGGCTTCACCCAGCTCAGCAGCTCTCCGTGTTACTACTTCTACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTTGGAGCCGCTGTTCTaGTCCATGTCGGAGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSLEPLF*SMSEAV Trigger: CACCGCCTCCGACATGGACAAGAACAGCGGCTCCAA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGCTTGTGTCCCCACTaGTTTCTCTTCCCCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSGLCPH*FLFPQP Trigger: CGGCTGGGGGAAGAGAAACAAGTGGGGACACAAGCC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGAGGCCAGCAGCAGCTaGGAATACTGGCTGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSEASSS*EYWLSC Trigger: GCAGCTCAGCCAGTATTCCAAGCTGCTGCTGGCCTC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTGAGGCCAGCAGCAGCTaGGAATACTGGCTGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTEASSS*EYWLSC Trigger: GCAGCTCAGCCAGTATTCCAAGCTGCTGCTGGCCTC...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCACACCCTTCCTGGGTaGGAAAGCAGACTCCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSHTLPG*ESRLRG Trigger: GCCACGGAGTCTGCTTTCCAACCCAGGAAGGGTGTG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | AACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCCCAATCTCTACCACGGTaGCTGAGATCTTCTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NRHSLFPGEKPAAEQCCPQSLPR*LRSSLG Trigger: GCCCAGAGAAGATCTCAGCAACCGTGGTAGAGATTG...GGGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTACCCTGCTTCCTGGGTaGGAAAGCAGACTCCGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSTLLPG*ESRLRG Trigger: GCCACGGAGTCTGCTTTCCAACCCAGGAAGCAGGGT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS GCA 90 bp | GATTTGGGCAGGGCCACCAACACTCCCTTCTCTCTCTTCATCAGCTaGATGGTAATGGTGTCCCCCACAGCATACTGTCGAGACTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DLGRATNTPFSLFIS*MVMVSPTAYCRDSV Trigger: CACAGAGTCTCGACAGTATGCTGTGGGGGACACCATTACCATGCAGCTGATGAAGAGAGAGAAGGGAGTGTTGGTGGCCCTGCCCAAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | AAACAAGTTGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGGCGGAGGAGCTGTaGGAGCCGCTGTTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KQVGLSFQLLHGGSQSNVEAEEL*EPLFLS Trigger: GGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCTC...TACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGAAGAGCTAAAGGGTTaGCTGCTGCCACCGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSEELKG*LLPPPL Trigger: AAGGGGCGGTGGCAGCAGCAAACCCTTTAGCTCTTC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | CTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTCCAGTTGCAGGCTTGTGTCCCCACTaGTTTCTCTTCCCCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LPAPTRRLTIKCRVTPVAGLCPH*FLFPQP Trigger: CGGCTGGGGGAAGAGAAACAAGTGGGGACACAAGCC...TGCAACTGGAGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTACAAGGCAGCGCACGTaGACAGGGTGCAGGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSTRQRT*TGCRNM Trigger: CATGTTCCTGCACCCTGTCAACGTGCGCTGCCTTGT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGCCACCCGTCTGCTTTaGCTTTGCCAACCCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSATRLL*LCQPSA Trigger: TGCTGAGGGTTGGCAAAGCAAAAGCAGACGGGTGGC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS TCA 90 bp | TGCTGGTGGGACCCAAAGCAGAATCAGAGGGACAGGTATAGGAATTaGAGGCCGGAAACTGCTGTAGGTTCTCGAGGGGAATGTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: CWWDPKQNQRDRYRN*RPETAVGSRGECGP Trigger: AGGTCCACATTCCCCTCGAGAACCTACAGCAGTTTCCGGCCTTCAATTCCTATACCTGTCCCTCTGATTCTGCTTTGGGTCCCACCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CCA 90 bp | TCCACAGCGCGTTATCTTGGCCGCAGTAGGTGGATAGAGGCATATTaGGCAAGATGGCACTTCATGGCTACAGATGCGCACTTGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: STARYLGRSRWIEAY*ARWHFMATDAHLFH Trigger: GTGGAACAAGTGCGCATCTGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCGGCCAAGATAACGCGCTGTGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CCA 90 bp | AGGAGGCTGCAGAGCCAGTTCACAGATGCTGAACTCACAGGTGAGTaGCAAGTGAGAGAGATACCTATGACGCTGCCGAACATCCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRLQSQFTDAELTGE*QVREIPMTLPNILR Trigger: TCTGAGGATGTTCGGCAGCGTCATAGGTATCTCTCTCACTTGCCACTCACCTGTGAGTTCAGCATCTGTGAACTGGCTCTGCAGCCTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAATTGGAGCCGCTGTTCTaGTCCATGTCGGAGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQLEPLF*SMSEAV Trigger: CACCGCCTCCGACATGGACAAGAACAGCGGCTCCAA...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CAA 90 bp | CAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTTTAAGTTGCTTTTCTGTGAATaGGAGCGACGGGACTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QLQGPTDRHANTLSEAFKLLFCE*ERRDWL Trigger: CAACCAGTCCCGTCGCTCCAATTCACAGAAAAGCAA...CTTAAAGGCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGCTGCCACCGCCCCTTaGAGGAGGCATCTTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSAATAP*RRHLVK Trigger: TTTAACAAGATGCCTCCTCAAAGGGGCGGTGGCAGC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | CAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTTTAAGAAAAAGGCTGCCACCGCCCCTTaGAGGAGGCATCTTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: QGPTDRHANTLSEAFKKKAATAP*RRHLVK Trigger: TTTAACAAGATGCCTCCTCAAAGGGGCGGTGGCAGC...CTTTTTCTTAAAGGCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTTTAAGGTGAGCTGCGTAGTCTaGGTCTTCAGACACCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: QLQGPTDRHANTLSEAFKVSCVV*VFRHHK Trigger: TTTGTGGTGTCTGAAGACCAAGACTACGCAGCTCAC...CTTAAAGGCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTTTAAGTCCACAAAGTCCCAGTaGACTAAGGTGTCAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLQGPTDRHANTLSEAFKSTKSQ*TKVSGS Trigger: TGACCCTGACACCTTAGTCAACTGGGACTTTGTGGA...CTTAAAGGCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | CAACAGGCACAGCCTCTTCCCAGGAGAAAAACCTGCAGCAGAGCAGTGCTGTCCGTGGATAGAGGCATATaGGGCAAGATGGCACTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QQAQPLPRRKTCSRAVLSVDRGI*GKMALH Trigger: ATGAAGTGCCATCTTGCCCAATATGCCTCTATCCAC...GGACAGCACTGCTCTGCTGCAGGTTTTTCTCCTGGGAAGAGGCTGTGCCTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTTCACCCACTTGGATTaGGGCAGGGCCACCAACACT | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSFTHLD*GRATNT Trigger: AGTGTTGGTGGCCCTGCCCAAATCCAAGTGGGTGAA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTCTACATTCACCCACTaGGATTTGGGCAGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSSTFTH*DLGRAT Trigger: GGTGGCCCTGCCCAAATCCAAGTGGGTGAATGTAGA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCTCGCGAGCCTTCTTTaGGCGCTGACGCTTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSLASLL*ALTLPF Trigger: AAAAGGAAGCGTCAGCGCCAAAAGAAGGCTCGCGAG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCCGTCTGCTTTTGCTTaGCCAACCCTCAGCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSPSAFA*PTLSIW Trigger: CCAGATGCTGAGGGTTGGCAAAGCAAAAGCAGACGG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCCGTCTGCTTTTGCTTaGCCAACCCTCAGCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSPSAFA*PTLSIC Trigger: GCAGATGCTGAGGGTTGGCAAAGCAAAAGCAGACGG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTTCTTTCCATCACTCTaGGGTTTAGACTCGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSFFPSL*GLDSPA Trigger: GGCCGGCGAGTCTAAACCCAAGAGTGATGGAAAGAA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | TGTAGAGTGACTCCAGTTGCAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGCTACAGATGCGCACTaGTTCCACAAAGTCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CRVTPVAGANRQACKHPFATDAH*FHKVPV Trigger: AACTGGGACTTTGTGGAACAAGTGCGCATCTGTAGC...GAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTGCAACTGGAGTCACTCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAAACAAGGCAGCGCACGTaGACAGGGTGCAGGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQTRQRT*TGCRNM Trigger: CATGTTCCTGCACCCTGTCAACGTGCGCTGCCTTGT...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTCAATCTCTACCACGGTaGCTGAGATCTTCTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSQSLPR*LRSSLG Trigger: GCCCAGAGAAGATCTCAGCAACCGTGGTAGAGATTG...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAAGCCACCCGTCTGCTTTaGCTTTGCCAACCCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQATRLL*LCQPSA Trigger: TGCTGAGGGTTGGCAAAGCAAAAGCAGACGGGTGGC...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS TCA 90 bp | GCACTTCATGGCTACAGATGCGCACTTGTTCCACAAAGTCCCAGTTaGCTAAGGTGTCAGGGTCAGCAAAGTGAGCTGCGTAGTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ALHGYRCALVPQSPS*LRCQGQQSELRSLG Trigger: ACCAAGACTACGCAGCTCACTTTGCTGACCCTGACACCTTAGTCAACTGGGACTTTGTGGAACAAGTGCGCATCTGTAGCCATGAAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CCA 90 bp | CGTTATCTTGGCCGCAGTAGGTGGATAGAGGCATATTGGGCAAGATaGCACTTCATGGCTACAGATGCGCACTTGTTCCACAAAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RYLGRSRWIEAYWAR*HFMATDAHLFHKVP Trigger: TGGGACTTTGTGGAACAAGTGCGCATCTGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCGGCCAAGATAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CCA 90 bp | CCAGCAGAAAATGTGTCCACAGCGCGTTATCTTGGCCGCAGTAGGTaGATAGAGGCATATTGGGCAAGATGGCACTTCATGGCTACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PAENVSTARYLGRSR*IEAYWARWHFMATD Trigger: ATCTGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCGGCCAAGATAACGCGCTGTGGACACATTTTCTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | CTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTCCAGTTGCATTCTTTCCATCACTCTaGGGTTTAGACTCGCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPAPTRRLTIKCRVTPVAFFPSL*GLDSPA Trigger: GGCCGGCGAGTCTAAACCCAAGAGTGATGGAAAGAA...TGCAACTGGAGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTTGCTTTTCTGTGAATaGGAGCGACGGGACTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSLLFCE*ERRDWL Trigger: CAACCAGTCCCGTCGCTCCAATTCACAGAAAAGCAA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTAGAAAGAGCTCCTTGTaGAAAGGCTTGTGTCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSRKSSL*KGLCPH Trigger: GTGGGGACACAAGCCTTTCAACAAGGAGCTCTTTCT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGTGAGCTGCGTAGTCTaGGTCTTCAGACACCACAAA | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSVSCVV*VFRHHK Trigger: TTTGTGGTGTCTGAAGACCAAGACTACGCAGCTCAC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTCCACAAAGTCCCAGTaGACTAAGGTGTCAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSSTKSQ*TKVSGS Trigger: TGACCCTGACACCTTAGTCAACTGGGACTTTGTGGA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGCTACAGATGCGCACTaGTTCCACAAAGTCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSATDAH*FHKVPV Trigger: AACTGGGACTTTGTGGAACAAGTGCGCATCTGTAGC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGCCTCCTGCCTGTCAGATGGTTTACAACTGACTCTGTCGCCTTTAAACAACCGTCTGCTTTTGCTTaGCCAACCCTCAGCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCLLPVRWFTTDSVAFKQPSAFA*PTLSIW Trigger: CCAGATGCTGAGGGTTGGCAAAGCAAAAGCAGACGG...TTGTTTAAAGGCGACAGAGTCAGTTGTAAACCATCTGACAGGCAGGAGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
||
| CDS CCA 90 bp | AGCTTGGAATACTGGCTGAGCTGCTCATCTCCTAGGTTAATAGGATaGTCTACATTCACCCACTTGGATTTGGGCAGGGCCACCAACACT | + |
|
Preference number: 5 (lower is better) Translates to: SLEYWLSCSSPRLIG*STFTHLDLGRATNT Trigger: AGTGTTGGTGGCCCTGCCCAAATCCAAGTGGGTGAATGTAGACCATCCTATTAACCTAGGAGATGAGCAGCTCAGCCAGTATTCCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTAACAAGTGGTTCAGGTaGATCTTCTTAGGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSNKWFR*IFLGPE Trigger: CTCTGGCCCTAAGAAGATCAACCTGAACCACTTGTT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTCCTTGTTGAAAGGCTaGTGTCCCCACTTGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSSLLKG*CPHLFL Trigger: GAGAAACAAGTGGGGACACAAGCCTTTCAACAAGGA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTTCCTTGTTGAAAGGCTaGTGTCCCCACTTGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTSLLKG*CPHLFL Trigger: GAGAAACAAGTGGGGACACAAGCCTTTCAACAAGGA...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGTGGATAGAGGCATATaGGGCAAGATGGCACTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSVDRGI*GKMALH Trigger: ATGAAGTGCCATCTTGCCCAATATGCCTCTATCCAC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGCTGCTTCGATAGCTaGGCTGAAGGAATTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSGCFDS*AEGILE Trigger: TTCCAAAATTCCTTCAGCCAAGCTATCGAAGCAGCC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
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| CDS-3UTR CAA 90 bp | AAACAAGTTGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAAGAAAGAGCTCCTTGTaGAAAGGCTTGTGTCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KQVGLSFQLLHGGSQSNVRKSSL*KGLCPH Trigger: GTGGGGACACAAGCCTTTCAACAAGGAGCTCTTTCT...TACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGTGGCAACAACACTCTaGAGATCCTTCTTATGCACA | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSVATTL*RSFLCT Trigger: TGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCAC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTTATTGTCATCTTTCTTaGGAGCAGTTTTGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSYCHLS*EQFWAT Trigger: GGTGGCCCAAAACTGCTCCAAAGAAAGATGACAATA...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
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| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGGAGGAACCAAGCTATaGTCATCTTTCTTTGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSGGTKL*SSFFGA Trigger: TGCTCCAAAGAAAGATGACAATAGCTTGGTTCCTCC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
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| CDS-3UTR CAA 90 bp | TGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTGGAGGAACCAAGCTATaGTCATCTTTCTTTGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WAQLPAPTRRLTIKCRVTGGTKL*SSFFGA Trigger: TGCTCCAAAGAAAGATGACAATAGCTTGGTTCCTCC...AGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTAACGCTTGGATCCATTaGAGTTCTTTCCATCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSNAWIH*SSFHHS Trigger: AGAGTGATGGAAAGAACTCAAATGGATCCAAGCGTT...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | AAACAAGTTGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAAACAAGTGGTTCAGGTaGATCTTCTTAGGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KQVGLSFQLLHGGSQSNVNKWFR*IFLGPE Trigger: CTCTGGCCCTAAGAAGATCAACCTGAACCACTTGTT...TACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CAA 90 bp | GCAAAACAAAAGCACAGAGAGGAAACCCGATGGAGAAGGCGCCTGGGCAATAGTGTCCAGAGAACAAACTaGTGCAGCTTCATCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AKQKHREETRWRRRLGNSVQRTN*CSFIIK Trigger: TTTGATGATGAAGCTGCACAAGTTTGTTCTCTGGAC...ACTATTGCCCAGGCGCCTTCTCCATCGGGTTTCCTCTCTGTGCTTTTGTTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS-3UTR CAA 90 bp | CAGGGGCCAACAGACAGGCATGCAAACACCCTTTCGGAGGCCTTTAAGAAAAAGGTCCAGAGAACAAACTaGTGCAGCTTCATCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QGPTDRHANTLSEAFKKKVQRTN*CSFIIK Trigger: TTTGATGATGAAGCTGCACAAGTTTGTTCTCTGGAC...CTTTTTCTTAAAGGCCTCCGAAAGGGTGTTTGCATGCCTGTCTGTTGGCCCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CAA 90 bp | AAACAAGTTGGGCTCAGCTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGGCTGCTTCGATAGCTaGGCTGAAGGAATTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KQVGLSFQLLHGGSQSNVGCFDS*AEGILE Trigger: TTCCAAAATTCCTTCAGCCAAGCTATCGAAGCAGCC...TACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAGCTGAGCCCAACTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS-3UTR CAA 90 bp | CTTCCAGCTCCTACACGGAGGCTCACAATCAAATGTAGAGTGACTCCAGTTGCAAACGCTTGGATCCATTaGAGTTCTTTCCATCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPAPTRRLTIKCRVTPVANAWIH*SSFHHS Trigger: AGAGTGATGGAAAGAACTCAAATGGATCCAAGCGTT...TGCAACTGGAGTCACTCTACATTTGATTGTGAGCCTCCGTGTAGGAGCTGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112097.8 |
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| CDS GCA 72 bp | CCGAGGCGGAGCGGGGCGGCTGTTGCCCTTTGCTGCTaGCCGAGGAGGCGGAGGAGCTGTTGGAGCCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PRRSGAAVALCC*PRRRRSCWSRC Trigger: ACAGCGGCTCCAACAGCTCCTCCGCCTCCTCGGGCAGCAGCAAAGGGCAACAGCCGCCCCGCTCCGCCTCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
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| CDS CAA 90 bp | GGCGGCTGTTGCCCTTTGCTGCTGCCCGAGGAGGCGGAGGAGCTGTaGGAGCCGCTGTTCTTGTCCATGTCGGAGGCGGTGGCGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GGCCPLLLPEEAEEL*EPLFLSMSEAVAAA Trigger: CGCCGCCGCCACCGCCTCCGACATGGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCTCCTCGGGCAGCAGCAAAGGGCAACAGCCGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
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| CDS TCA 72 bp | CCAGGCTGCCGTACTCCCGCACAAGGCAGCGCACGTTaGCAGGGTGCAGGAACATGTGCTGTCCATCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PGCRTPAQGSAR*QGAGTCAVHLP Trigger: CGGAAGATGGACAGCACATGTTCCTGCACCCTGTCAACGTGCGCTGCCTTGTGCGGGAGTACGGCAGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS GCA 72 bp | TGCTCCAGCGCTCCTTTCTCCTCCAGAACTACCCGGTaGAGCACCTGCTCCTTCGAGGCCAGCAGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CSSAPFSSRTTR*STCSFEASSSL Trigger: CAAGCTGCTGCTGGCCTCGAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGAGGAGAAAGGAGCGCTGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS GCA 72 bp | ATCTCTACCACGGTTGCTGAGATCTTCTCTGGGCTCTaGTCCAGGCTGCCGTACTCCCGCACAAGGCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ISTTVAEIFSGL*SRLPYSRTRQR Trigger: GCGCTGCCTTGTGCGGGAGTACGGCAGCCTGGAGCAGAGCCCAGAGAAGATCTCAGCAACCGTGGTAGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS GCA 72 bp | CCCACTTGTTTCTCTTCCCCCAGCCGCCATGCCCACTaGCTTCAAAGTGACCTGCCTGGCCACGTGGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PTCFSSPSRHAH*LQSDLPGHVVQ Trigger: TTGAACCACGTGGCCAGGCAGGTCACTTTGAAGGCAGTGGGCATGGCGGCTGGGGGAAGAGAAACAAGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS GCA 72 bp | GCTCCTTTCTCCTCCAGAACTACCCGGTGCAGCACCTaGTCCTTCGAGGCCAGCAGCAGCTTGGAATACTGG | + |
|
Preference number: 6 (lower is better) Translates to: APFSSRTTRCST*SFEASSSLEYW Trigger: CCAGTATTCCAAGCTGCTGCTGGCCTCGAAGGAGCAGGTGCTGCACCGGGTAGTTCTGGAGGAGAAAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS GCA 72 bp | AGTCGTCTTCCAGACTCCCAACGCAGAAGGAAGGACTaGCCTGACTGGCAGTGGGTGACAGAGGGGTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRLPDSQRRRKD*PDWQWVTEGSA Trigger: TGCTGACCCCTCTGTCACCCACTGCCAGTCAGGGCAGTCCTTCCTTCTGCGTTGGGAGTCTGGAAGACGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 |
||
| CDS TCA 72 bp | AACACCAGTGACCTCCCCTCCGCCTCCAGCCACTCCTaGCAGAGCTTCTTCCCGAATCTTGACCTCCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: NTSDLPSASSHS*QSFFPNLDLLD Trigger: ATCCAGGAGGTCAAGATTCGGGAAGAAGCTCTGTCAGGAGTGGCTGGAGGCGGAGGGGAGGTCACTGGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS GCA 72 bp | CTTCTTAGGGCCAGAGAACTGGGCAGGGCTAAACTCTaGCCGCTGAGCCTCTGCTACCTCATCTCGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLRARELGRAKL*PLSLCYLISSS Trigger: GGAAGACGAGATGAGGTAGCAGAGGCTCAGCGGGCAGAGTTTAGCCCTGCCCAGTTCTCTGGCCCTAAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS GCA 72 bp | AACAGTCCCCTCTCCCAGACTGTCATCGGCTACCTCTaGGTCCTCACAGGCTTCTGGCTCAGACACTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NSPLSQTVIGYL*VLTGFWLRHCF Trigger: GAAGCAGTGTCTGAGCCAGAAGCCTGTGAGGACGCAGAGGTAGCCGATGACAGTCTGGGAGAGGGGACTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS CAA 72 bp | CGGTGCAGCACCTGCTCCTTCGAGGCCAGCAGCAGCTaGGAATACTGGCTGAGCTGCTCATCTCCTAGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: RCSTCSFEASSS*EYWLSCSSPRL Trigger: TAACCTAGGAGATGAGCAGCTCAGCCAGTATTCCAAGCTGCTGCTGGCCTCGAAGGAGCAGGTGCTGCACCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS CAA 90 bp | TCCCCTCCGCCTCCAGCCACTCCTGACAGAGCTTCTTCCCGAATCTaGACCTCCTGGATAGCAGCCTCAATGAAACAGGACTCAGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SPPPPATPDRASSRI*TSWIAASMKQDSGV Trigger: CACTCCTGAGTCCTGTTTCATTGAGGCTGCTATCCAGGAGGTCAAGATTCGGGAAGAAGCTCTGTCAGGAGTGGCTGGAGGCGGAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
||
| CDS CCA 72 bp | CATCAAAAGCAGACAGATACTCCAGCACACCCTTCCTaGGTTGGAAAGCAGACTCCGTGGCCAGGGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: HQKQTDTPAHPS*VGKQTPWPGEP Trigger: TGGCTCCCCTGGCCACGGAGTCTGCTTTCCAACCCAGGAAGGGTGTGCTGGAGTATCTGTCTGCTTTTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000139853.2 |
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| CDS CCA 72 bp | AAGGCCGGAAACTGCTGTAGGTTCTCGAGGGGAATGTaGACCTCGGGATACCTGCCCTGTCTCTTGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KAGNCCRFSRGM*TSGYLPCLLFS Trigger: GGAGAACAAGAGACAGGGCAGGTATCCCGAGGTCCACATTCCCCTCGAGAACCTACAGCAGTTTCCGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CAA 90 bp | AGAACTACCCGGTGCAGCACCTGCTCCTTCGAGGCCAGCAGCAGCTaGGAATACTGGCTGAGCTGCTCATCTCCTAGGTTAATAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: RTTRCSTCSFEASSS*EYWLSCSSPRLIGW Trigger: CCATCCTATTAACCTAGGAGATGAGCAGCTCAGCCAGTATTCCAAGCTGCTGCTGGCCTCGAAGGAGCAGGTGCTGCACCGGGTAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CAA 72 bp | AGAAAGAGCTCCTTGTTGAAAGGCTTGTGTCCCCACTaGTTTCTCTTCCCCCAGCCGCCATGCCCACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: RKSSLLKGLCPH*FLFPQPPCPLP Trigger: AGGCAGTGGGCATGGCGGCTGGGGGAAGAGAAACAAGTGGGGACACAAGCCTTTCAACAAGGAGCTCTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CAA 72 bp | CCTCAGACATGGAATACCCAGCAATCTCTACCACGGTaGCTGAGATCTTCTCTGGGCTCTGCTCCAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PQTWNTQQSLPR*LRSSLGSAPGC Trigger: GCAGCCTGGAGCAGAGCCCAGAGAAGATCTCAGCAACCGTGGTAGAGATTGCTGGGTATTCCATGTCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS GCA 72 bp | AGGGCCACCAACACTCCCTTCTCTCTCTTCATCAGCTaGATGGTAATGGTGTCCCCCACAGCATACTGTCGA | + |
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Preference number: 6 (lower is better) Translates to: RATNTPFSLFIS*MVMVSPTAYCR Trigger: TCGACAGTATGCTGTGGGGGACACCATTACCATGCAGCTGATGAAGAGAGAGAAGGGAGTGTTGGTGGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CCA 72 bp | GGCCGCAGTAGGTGGATAGAGGCATATTGGGCAAGATaGCACTTCATGGCTACAGATGCGCACTTGTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GRSRWIEAYWAR*HFMATDAHLFH Trigger: GTGGAACAAGTGCGCATCTGTAGCCATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CCA 72 bp | ACCTGCTCCTTCGAGGCCAGCAGCAGCTTGGAATACTaGCTGAGCTGCTCATCTCCTAGGTTAATAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: TCSFEASSSLEY*LSCSSPRLIGW Trigger: CCATCCTATTAACCTAGGAGATGAGCAGCTCAGCCAGTATTCCAAGCTGCTGCTGGCCTCGAAGGAGCAGGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CAA 72 bp | CCTCCAGCCACTCCTGACAGAGCTTCTTCCCGAATCTaGACCTCCTGGATAGCAGCCTCAATGAAACAGGAC | + |
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Preference number: 6 (lower is better) Translates to: PPATPDRASSRI*TSWIAASMKQD Trigger: GTCCTGTTTCATTGAGGCTGCTATCCAGGAGGTCAAGATTCGGGAAGAAGCTCTGTCAGGAGTGGCTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CAA 90 bp | ACAAATTGGCAGTTGGCCTGTAGAAAGAGCTCCTTGTTGAAAGGCTaGTGTCCCCACTTGTTTCTCTTCCCCCAGCCGCCATGCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: TNWQLACRKSSLLKG*CPHLFLFPQPPCPL Trigger: CAGTGGGCATGGCGGCTGGGGGAAGAGAAACAAGTGGGGACACAAGCCTTTCAACAAGGAGCTCTTTCTACAGGCCAACTGCCAATTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS TCA 72 bp | GGCTACAGATGCGCACTTGTTCCACAAAGTCCCAGTTaGCTAAGGTGTCAGGGTCAGCAAAGTGAGCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: GYRCALVPQSPS*LRCQGQQSELR Trigger: ACGCAGCTCACTTTGCTGACCCTGACACCTTAGTCAACTGGGACTTTGTGGAACAAGTGCGCATCTGTAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CCA 72 bp | CAGAGCCAGTTCACAGATGCTGAACTCACAGGTGAGTaGCAAGTGAGAGAGATACCTATGACGCTGCCGAAC | + |
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Preference number: 6 (lower is better) Translates to: QSQFTDAELTGE*QVREIPMTLPN Trigger: GTTCGGCAGCGTCATAGGTATCTCTCTCACTTGCCACTCACCTGTGAGTTCAGCATCTGTGAACTGGCTCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CAA 90 bp | GCCTGGCCACGTGGTTCAAAGGTGAAATTTAACAAGTGGTTCAGGTaGATCTTCTTAGGGCCAGAGAACTGGGCAGGGCTAAACTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: AWPRGSKVKFNKWFR*IFLGPENWAGLNSA Trigger: GGCAGAGTTTAGCCCTGCCCAGTTCTCTGGCCCTAAGAAGATCAACCTGAACCACTTGTTAAATTTCACCTTTGAACCACGTGGCCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS TCA 72 bp | GACCCAAAGCAGAATCAGAGGGACAGGTATAGGAATTaGAGGCCGGAAACTGCTGTAGGTTCTCGAGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: DPKQNQRDRYRN*RPETAVGSRGE Trigger: TTCCCCTCGAGAACCTACAGCAGTTTCCGGCCTTCAATTCCTATACCTGTCCCTCTGATTCTGCTTTGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CCA 72 bp | AATGTGTCCACAGCGCGTTATCTTGGCCGCAGTAGGTaGATAGAGGCATATTGGGCAAGATGGCACTTCATG | + |
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Preference number: 6 (lower is better) Translates to: NVSTARYLGRSR*IEAYWARWHFM Trigger: CATGAAGTGCCATCTTGCCCAATATGCCTCTATCCACCTACTGCGGCCAAGATAACGCGCTGTGGACACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CCA 72 bp | TACTGGCTGAGCTGCTCATCTCCTAGGTTAATAGGATaGTCTACATTCACCCACTTGGATTTGGGCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: YWLSCSSPRLIG*STFTHLDLGRA Trigger: GGCCCTGCCCAAATCCAAGTGGGTGAATGTAGACCATCCTATTAACCTAGGAGATGAGCAGCTCAGCCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CAA 90 bp | TCATCTCCTAGGTTAATAGGATGGTCTACATTCACCCACTTGGATTaGGGCAGGGCCACCAACACTCCCTTCTCTCTCTTCATCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSPRLIGWSTFTHLD*GRATNTPFSLFISC Trigger: GCAGCTGATGAAGAGAGAGAAGGGAGTGTTGGTGGCCCTGCCCAAATCCAAGTGGGTGAATGTAGACCATCCTATTAACCTAGGAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CAA 90 bp | AGCTGCTCATCTCCTAGGTTAATAGGATGGTCTACATTCACCCACTaGGATTTGGGCAGGGCCACCAACACTCCCTTCTCTCTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: SCSSPRLIGWSTFTH*DLGRATNTPFSLFI Trigger: GATGAAGAGAGAGAAGGGAGTGTTGGTGGCCCTGCCCAAATCCAAGTGGGTGAATGTAGACCATCCTATTAACCTAGGAGATGAGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CCA 72 bp | AGAGATACCTATGACGCTGCCGAACATCCTCAGACATaGAATACCCAGCAATCTCTACCACGGTTGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: RDTYDAAEHPQT*NTQQSLPRLLR Trigger: TCTCAGCAACCGTGGTAGAGATTGCTGGGTATTCCATGTCTGAGGATGTTCGGCAGCGTCATAGGTATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CAA 72 bp | AGGTTAATAGGATGGTCTACATTCACCCACTTGGATTaGGGCAGGGCCACCAACACTCCCTTCTCTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: RLIGWSTFTHLD*GRATNTPFSLF Trigger: GAAGAGAGAGAAGGGAGTGTTGGTGGCCCTGCCCAAATCCAAGTGGGTGAATGTAGACCATCCTATTAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CAA 72 bp | TCTCCTAGGTTAATAGGATGGTCTACATTCACCCACTaGGATTTGGGCAGGGCCACCAACACTCCCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SPRLIGWSTFTH*DLGRATNTPFS Trigger: AGAGAAGGGAGTGTTGGTGGCCCTGCCCAAATCCAAGTGGGTGAATGTAGACCATCCTATTAACCTAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS TCA 72 bp | GGGTTCACGCTTGCGATTGTAACGCTTGGATCCATTTaGGTTCTTTCCATCACTCTTGGGTTTAGACTCGCC | + |
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Preference number: 6 (lower is better) Translates to: GFTLAIVTLGSI*VLSITLGFRLA Trigger: GGCGAGTCTAAACCCAAGAGTGATGGAAAGAACTCAAATGGATCCAAGCGTTACAATCGCAAGCGTGAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CCA 72 bp | TGGGGTAGGAGGGTTCACGCTTGCGATTGTAACGCTTaGATCCATTTGAGTTCTTTCCATCACTCTTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: WGRRVHACDCNA*IHLSSFHHSWV Trigger: AACCCAAGAGTGATGGAAAGAACTCAAATGGATCCAAGCGTTACAATCGCAAGCGTGAACCCTCCTACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CCA 72 bp | GCCTGGCCACGTGGTTCAAAGGTGAAATTTAACAAGTaGTTCAGGTTGATCTTCTTAGGGCCAGAGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: AWPRGSKVKFNK*FRLIFLGPENW Trigger: CCAGTTCTCTGGCCCTAAGAAGATCAACCTGAACCACTTGTTAAATTTCACCTTTGAACCACGTGGCCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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| CDS CAA 72 bp | CGTGGTTCAAAGGTGAAATTTAACAAGTGGTTCAGGTaGATCTTCTTAGGGCCAGAGAACTGGGCAGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: RGSKVKFNKWFR*IFLGPENWAGL Trigger: TAGCCCTGCCCAGTTCTCTGGCCCTAAGAAGATCAACCTGAACCACTTGTTAAATTTCACCTTTGAACCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040555.15 ENSMUST00000112096.9 ENSMUST00000112097.8 ENSMUST00000139853.2 |
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