Pregenerated sensors for RND2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001313Ensembl transcript IDs: ENSMUST00000001347.7
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GTGAGGAGTGACAGCCTTCTACCCTCTAGCTCCTCCAACCAGAATTaGTCCTCTGCCTGCCCTGACCTTCCAGCCAGGGCCAGGAGGTCA | + |
Preference number: 1 (lower is better) Translates to: VRSDSLLPSSSSNQN*SSACPDLPARARRS Trigger: TGACCTCCTGGCCCTGGCTGGAAGGTCAGGGCAGGCAGAGGAGCAATTCTGGTTGGAGGAGCTAGAGGGTAGAAGGCTGTCACTCCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR GCA 90 bp | AGCCTTCTACCCTCTAGCTCCTCCAACCAGAATTGCTCCTCTGCCTaGCCTGACCTTCCAGCCAGGGCCAGGAGGTCAAAAAGTCCAGGA | + |
Preference number: 1 (lower is better) Translates to: SLLPSSSSNQNCSSA*PDLPARARRSKSPG Trigger: TCCTGGACTTTTTGACCTCCTGGCCCTGGCTGGAAGGTCAGGGCAGGCAGAGGAGCAATTCTGGTTGGAGGAGCTAGAGGGTAGAAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR GCA 90 bp | AGGAGACTCAACCAAAGTCATTGCTTGGTTTCCCAAACCCCCACCTaGCCTATCCAAGTTCATGTACCAGATGCCTACCCTGTCAGCTCT | + |
Preference number: 1 (lower is better) Translates to: RRLNQSHCLVSQTPT*PIQVHVPDAYPVSS Trigger: AGAGCTGACAGGGTAGGCATCTGGTACATGAACTTGGATAGGGCAGGTGGGGGTTTGGGAAACCAAGCAATGACTTTGGTTGAGTCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR CCA 90 bp | AGAACAGATGTGGACTTGAGGGGAGAGACAGAGAAGGTCATCAAATaGACACTTTCCTTAGGGAAGGCAGATGGGATATGGGGACCAGGG | + |
Preference number: 1 (lower is better) Translates to: RTDVDLRGETEKVIK*TLSLGKADGIWGPG Trigger: CCCTGGTCCCCATATCCCATCTGCCTTCCCTAAGGAAAGTGTCCATTTGATGACCTTCTCTGTCTCTCCCCTCAAGTCCACATCTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR GCA 90 bp | GACACTTTCCTTAGGGAAGGCAGATGGGATATGGGGACCAGGGTATaGAAGGAAGTTACACTTTACATAGGAGACTCAACCAAAGTCATT | + |
Preference number: 1 (lower is better) Translates to: DTFLREGRWDMGTRV*KEVTLYIGDSTKVI Trigger: AATGACTTTGGTTGAGTCTCCTATGTAAAGTGTAACTTCCTTGCATACCCTGGTCCCCATATCCCATCTGCCTTCCCTAAGGAAAGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR CCA 90 bp | GACAGAGAAGGTCATCAAATGGACACTTTCCTTAGGGAAGGCAGATaGGATATGGGGACCAGGGTATGCAAGGAAGTTACACTTTACATA | + |
Preference number: 1 (lower is better) Translates to: DREGHQMDTFLREGR*DMGTRVCKEVTLYI Trigger: TATGTAAAGTGTAACTTCCTTGCATACCCTGGTCCCCATATCCCATCTGCCTTCCCTAAGGAAAGTGTCCATTTGATGACCTTCTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR CCA 90 bp | TTTATTTGCGGGCTGATGGAGAAAGGGCAAGCTAGAACTGGTTGGTaGGTTGATGGGAGGAAAGAGCTTCTTGCTTTAAAATTTAGTGCG | + |
Preference number: 1 (lower is better) Translates to: FICGLMEKGQARTGW*VDGRKELLALKFSA Trigger: CGCACTAAATTTTAAAGCAAGAAGCTCTTTCCTCCCATCAACCCACCAACCAGTTCTAGCTTGCCCTTTCTCCATCAGCCCGCAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR CCA 90 bp | GGCTTTATTTGCGGGCTGATGGAGAAAGGGCAAGCTAGAACTGGTTaGTGGGTTGATGGGAGGAAAGAGCTTCTTGCTTTAAAATTTAGT | + |
Preference number: 1 (lower is better) Translates to: GFICGLMEKGQARTG*WVDGRKELLALKFS Trigger: ACTAAATTTTAAAGCAAGAAGCTCTTTCCTCCCATCAACCCACCAACCAGTTCTAGCTTGCCCTTTCTCCATCAGCCCGCAAATAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR GCA 90 bp | ATGCAAGGAAGTTACACTTTACATAGGAGACTCAACCAAAGTCATTaGTTGGTTTCCCAAACCCCCACCTGCCCTATCCAAGTTCATGTA | + |
Preference number: 1 (lower is better) Translates to: MQGSYTLHRRLNQSH*LVSQTPTCPIQVHV Trigger: TACATGAACTTGGATAGGGCAGGTGGGGGTTTGGGAAACCAAGCAATGACTTTGGTTGAGTCTCCTATGTAAAGTGTAACTTCCTTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR GCA 90 bp | GTTGATGGGAGGAAAGAGCTTCTTGCTTTAAAATTTAGTGCGCATTaGCTGAAGGTTAGCATGTACAGAACAGATGTGGACTTGAGGGGA | + |
Preference number: 1 (lower is better) Translates to: VDGRKELLALKFSAH*LKVSMYRTDVDLRG Trigger: TCCCCTCAAGTCCACATCTGTTCTGTACATGCTAACCTTCAGGCAATGCGCACTAAATTTTAAAGCAAGAAGCTCTTTCCTCCCATCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR-3UTR GCA 90 bp | CCTGCCCTATCCAAGTTCATGTACCAGATGCCTACCCTGTCAGCTCTCTCAGCTAATTGCTCCTCTGCCTaGCCTGACCTTCCAGCCAGG | + |
Preference number: 2 (lower is better) Translates to: PALSKFMYQMPTLSALSANCSSA*PDLPAR Trigger: CCTGGCTGGAAGGTCAGGGCAGGCAGAGGAGCAATT...AGCTGAGAGAGCTGACAGGGTAGGCATCTGGTACATGAACTTGGATAGGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR-3UTR GCA 90 bp | AAAGAGCTTCTTGCTTTAAAATTTAGTGCGCATTGCCTGAAGGTTAGCATGTACTCCCAAACCCCCACCTaGCCTATCCAAGTTCATGTA | + |
Preference number: 2 (lower is better) Translates to: KELLALKFSAHCLKVSMYSQTPT*PIQVHV Trigger: TACATGAACTTGGATAGGGCAGGTGGGGGTTTGGGA...GTACATGCTAACCTTCAGGCAATGCGCACTAAATTTTAAAGCAAGAAGCTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR CCA 72 bp | TGCGGGCTGATGGAGAAAGGGCAAGCTAGAACTGGTTaGTGGGTTGATGGGAGGAAAGAGCTTCTTGCTTTA | + |
Preference number: 3 (lower is better) Translates to: CGLMEKGQARTG*WVDGRKELLAL Trigger: TAAAGCAAGAAGCTCTTTCCTCCCATCAACCCACCAACCAGTTCTAGCTTGCCCTTTCTCCATCAGCCCGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR GCA 72 bp | CTTAGGGAAGGCAGATGGGATATGGGGACCAGGGTATaGAAGGAAGTTACACTTTACATAGGAGACTCAACC | + |
Preference number: 3 (lower is better) Translates to: LREGRWDMGTRV*KEVTLYIGDST Trigger: GGTTGAGTCTCCTATGTAAAGTGTAACTTCCTTGCATACCCTGGTCCCCATATCCCATCTGCCTTCCCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR CCA 72 bp | AAATGGACACTTTCCTTAGGGAAGGCAGATGGGATATaGGGACCAGGGTATGCAAGGAAGTTACACTTTACA | + |
Preference number: 3 (lower is better) Translates to: KWTLSLGKADGI*GPGYARKLHFT Trigger: TGTAAAGTGTAACTTCCTTGCATACCCTGGTCCCCATATCCCATCTGCCTTCCCTAAGGAAAGTGTCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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3UTR GCA 72 bp | AGGAAAGAGCTTCTTGCTTTAAAATTTAGTGCGCATTaGCTGAAGGTTAGCATGTACAGAACAGATGTGGAC | + |
Preference number: 3 (lower is better) Translates to: RKELLALKFSAH*LKVSMYRTDVD Trigger: GTCCACATCTGTTCTGTACATGCTAACCTTCAGGCAATGCGCACTAAATTTTAAAGCAAGAAGCTCTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR TCA 90 bp | CAGGAGGTCAAAAAGTCCAGGAGCACCCACGGGAACAACCGTGTCTCTCACCCAGGCCGTCCCGACAGTTaGGTGGATCGCTGCAGTCCC | + |
Preference number: 4 (lower is better) Translates to: QEVKKSRSTHGNNRVSHPGRPDS*VDRCSP Trigger: GGGACTGCAGCGATCCACTCAACTGTCGGGACGGCC...TGGGTGAGAGACACGGTTGTTCCCGTGGGTGCTCCTGGACTTTTTGACCTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CCA 90 bp | GCCTGCCCTGACCTTCCAGCCAGGGCCAGGAGGTCAAAAAGTCCAGGAGCACCCATAGCTCCCTCAGTGTaGCCAGGTCAGTCCGCATGT | + |
Preference number: 4 (lower is better) Translates to: ACPDLPARARRSKSPGAPIAPSV*PGQSAC Trigger: ACATGCGGACTGACCTGGCCACACTGAGGGAGCTAT...GGGTGCTCCTGGACTTTTTGACCTCCTGGCCCTGGCTGGAAGGTCAGGGCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR GCA 90 bp | AAAGTCCAGGAGCACCCACGGGAACAACCGTGTCTCTCACCCAGCCCTCTCCCCGCCAGCACAGTACCCTaGTCATGTGTGACAGGGATG | + |
Preference number: 4 (lower is better) Translates to: KVQEHPREQPCLSPSPLPASTVP*SCVTGM Trigger: CATCCCTGTCACACATGAGCAGGGTACTGTGCTGGC...GGGGAGAGGGCTGGGTGAGAGACACGGTTGTTCCCGTGGGTGCTCCTGGACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CCA 90 bp | CCTTCCAGCCAGGGCCAGGAGGTCAAAAAGTCCAGGAGCACCCACGGGAACAACGCCACTGTGGCCACATaGAAGACATCCCGGACACTG | + |
Preference number: 4 (lower is better) Translates to: PSSQGQEVKKSRSTHGNNATVAT*KTSRTL Trigger: CAGTGTCCGGGATGTCTTCCATGTGGCCACAGTGGC...GTTGTTCCCGTGGGTGCTCCTGGACTTTTTGACCTCCTGGCCCTGGCTGGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR GCA 90 bp | GCCTGCCCTGACCTTCCAGCCAGGGCCAGGAGGTCAAAAAGTCCAGGAGCACCCTTGGCTCGATCCTTATaGATCTCGCCCTCATTTCCC | + |
Preference number: 4 (lower is better) Translates to: ACPDLPARARRSKSPGAPLARSL*ISPSFP Trigger: GGGAAATGAGGGCGAGATGCATAAGGATCGAGCCAA...GGGTGCTCCTGGACTTTTTGACCTCCTGGCCCTGGCTGGAAGGTCAGGGCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CCA 90 bp | TCCCAAACCCCCACCTGCCCTATCCAAGTTCATGTACCAGATGCCTACCCTGTCCGGGGTAGGCGTCCTTaGCGAACACCTGCAGCAACG | + |
Preference number: 4 (lower is better) Translates to: SQTPTCPIQVHVPDAYPVRGRRP*RTPAAT Trigger: CGTTGCTGCAGGTGTTCGCCAAGGACGCCTACCCCG...GACAGGGTAGGCATCTGGTACATGAACTTGGATAGGGCAGGTGGGGGTTTGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR GCA 90 bp | TCCCAAACCCCCACCTGCCCTATCCAAGTTCATGTACCAGATGCCTACCCTGTCTCCTTGGCGAACACCTaGAGCAACGCTGTCTTGCCG | + |
Preference number: 4 (lower is better) Translates to: SQTPTCPIQVHVPDAYPVSLANT*SNAVLP Trigger: CGGCAAGACAGCGTTGCTGCAGGTGTTCGCCAAGGA...GACAGGGTAGGCATCTGGTACATGAACTTGGATAGGGCAGGTGGGGGTTTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CCA 90 bp | CAGGAGGTCAAAAAGTCCAGGAGCACCCACGGGAACAACCGTGTCTCTCACCCAAGTTCTCAAACACCGTaGGGACATAACTCCCGGGGT | + |
Preference number: 4 (lower is better) Translates to: QEVKKSRSTHGNNRVSHPSSQTP*GHNSRG Trigger: ACCCCGGGAGTTATGTCCCCACGGTGTTTGAGAACT...TGGGTGAGAGACACGGTTGTTCCCGTGGGTGCTCCTGGACTTTTTGACCTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CCA 90 bp | GCCAGGGCCAGGAGGTCAAAAAGTCCAGGAGCACCCACGGGAACAACCGTGTCTACTGTCCAGTGTTTCTaGCCGGCTAATGTCAAAGCA | + |
Preference number: 4 (lower is better) Translates to: ARARRSKSPGAPTGTTVSTVQCF*PANVKA Trigger: TGCTTTGACATTAGCCGGCCAGAAACACTGGACAGT...AGACACGGTTGTTCCCGTGGGTGCTCCTGGACTTTTTGACCTCCTGGCCCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CCA 90 bp | AAGGGTGTAGAGAATGGGGTGAGGAGTGACAGCCTTCTACCCTCTAGCTCCTCCCGAGAGAAGCCACTGTaGCCACATGGAAGACATCCC | + |
Preference number: 4 (lower is better) Translates to: KGVENGVRSDSLLPSSSSREKPL*PHGRHP Trigger: GGGATGTCTTCCATGTGGCCACAGTGGCTTCTCTCG...GGAGGAGCTAGAGGGTAGAAGGCTGTCACTCCTCACCCCATTCTCTACACCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR TCA 90 bp | TTTCCCAAACCCCCACCTGCCCTATCCAAGTTCATGTACCAGATGCCTACCCTGAAGTATCCCACATGTTaGGCTCAATGCGGCGCTTGT | + |
Preference number: 4 (lower is better) Translates to: FPKPPPALSKFMYQMPTLKYPTC*AQCGAC Trigger: ACAAGCGCCGCATTGAGCTCAACATGTGGGATACTT...CAGGGTAGGCATCTGGTACATGAACTTGGATAGGGCAGGTGGGGGTTTGGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CCA 90 bp | CTGCCCTATCCAAGTTCATGTACCAGATGCCTACCCTGTCAGCTCTCTCAGCTAGCACCACCTTGGCATTaGGGCAAAACTCCTGAGTCT | + |
Preference number: 4 (lower is better) Translates to: LPYPSSCTRCLPCQLSQLAPPWH*GKTPES Trigger: AGACTCAGGAGTTTTGCCCCAATGCCAAGGTGGTGC...TAGCTGAGAGAGCTGACAGGGTAGGCATCTGGTACATGAACTTGGATAGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR GCA 90 bp | CATGTACAGAACAGATGTGGACTTGAGGGGAGAGACAGAGAAGGTCATCAAATGGACACAGCTCCCACTTaGTTGGCCAGCACAGTACCC | + |
Preference number: 4 (lower is better) Translates to: HVQNRCGLEGRDREGHQMDTAPT*LASTVP Trigger: GGGTACTGTGCTGGCCAAGCAAGTGGGAGCTGTGTC...CATTTGATGACCTTCTCTGTCTCTCCCCTCAAGTCCACATCTGTTCTGTACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR TCA 90 bp | CATGTACAGAACAGATGTGGACTTGAGGGGAGAGACAGAGAAGGTCATCAAATGTTGGGGCAAAACTCCTaGGTCTCTCCTTGCCACTTC | + |
Preference number: 4 (lower is better) Translates to: HVQNRCGLEGRDREGHQMLGQNS*VSPCHF Trigger: GAAGTGGCAAGGAGAGACTCAGGAGTTTTGCCCCAA...CATTTGATGACCTTCTCTGTCTCTCCCCTCAAGTCCACATCTGTTCTGTACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CCA 90 bp | CTGCCCTATCCAAGTTCATGTACCAGATGCCTACCCTGTCAGCTCTCTCAGCTATGTCGATCTCGAAGCTaGCAGTGTAGTTCTCAAACA | + |
Preference number: 4 (lower is better) Translates to: LPYPSSCTRCLPCQLSQLCRSRS*QCSSQT Trigger: TGTTTGAGAACTACACTGCCAGCTTCGAGATCGACA...TAGCTGAGAGAGCTGACAGGGTAGGCATCTGGTACATGAACTTGGATAGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CCA 90 bp | TGGGATATGGGGACCAGGGTATGCAAGGAAGTTACACTTTACATAGGAGACTCACAACCAGCACCACCTTaGCATTGGGGCAAAACTCCT | + |
Preference number: 4 (lower is better) Translates to: WDMGTRVCKEVTLYIGDSQPAPP*HWGKTP Trigger: AGGAGTTTTGCCCCAATGCCAAGGTGGTGCTGGTTG...TGAGTCTCCTATGTAAAGTGTAACTTCCTTGCATACCCTGGTCCCCATATCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR GCA 90 bp | GCTTTAAAATTTAGTGCGCATTGCCTGAAGGTTAGCATGTACAGAACAGATGTGTCAGTACGACGTAGCTaGCTATGGCCACGGCCGAGA | + |
Preference number: 4 (lower is better) Translates to: ALKFSAHCLKVSMYRTDVSVRRS*LWPRPR Trigger: TCTCGGCCGTGGCCATAGGCAGCTACGTCGTACTGA...CACATCTGTTCTGTACATGCTAACCTTCAGGCAATGCGCACTAAATTTTAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CCA 90 bp | ACCAGGGTATGCAAGGAAGTTACACTTTACATAGGAGACTCAACCAAAGTCATTCAGCTCCCACTTGCTTaGCCAGCACAGTACCCTGCT | + |
Preference number: 4 (lower is better) Translates to: TRVCKEVTLYIGDSTKVIQLPLA*PAQYPA Trigger: AGCAGGGTACTGTGCTGGCCAAGCAAGTGGGAGCTG...AATGACTTTGGTTGAGTCTCCTATGTAAAGTGTAACTTCCTTGCATACCCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR TCA 90 bp | GCTTTAAAATTTAGTGCGCATTGCCTGAAGGTTAGCATGTACAGAACAGATGTGCTCCTTGCCACTTCTTaGGGACACTGTCCAGTGTTT | + |
Preference number: 4 (lower is better) Translates to: ALKFSAHCLKVSMYRTDVLLATS*GHCPVF Trigger: AAACACTGGACAGTGTCCTCAAGAAGTGGCAAGGAG...CACATCTGTTCTGTACATGCTAACCTTCAGGCAATGCGCACTAAATTTTAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 90 bp | GCATCTCGCCCTCATTTCCCCGGTCTGGCCGTCCCGACAGTTGAGTaGATCGCTGCAGTCCCCGGCGAGAGTCAGTACGACGTAGCTGCC | + |
Preference number: 5 (lower is better) Translates to: ASRPHFPGLAVPTVE*IAAVPGESQYDVAA Trigger: GGCAGCTACGTCGTACTGACTCTCGCCGGGGACTGCAGCGATCCACTCAACTGTCGGGACGGCCAGACCGGGGAAATGAGGGCGAGATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 90 bp | GATCGCTGCAGTCCCCGGCGAGAGTCAGTACGACGTAGCTGCCTATaGCCACGGCCGAGAGAAGCCACTGTGGCCACATGGAAGACATCC | + |
Preference number: 5 (lower is better) Translates to: DRCSPRRESVRRSCL*PRPREATVATWKTS Trigger: GGATGTCTTCCATGTGGCCACAGTGGCTTCTCTCGGCCGTGGCCATAGGCAGCTACGTCGTACTGACTCTCGCCGGGGACTGCAGCGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 90 bp | GCTCTTGGCTCGATCCTTATGCATCTCGCCCTCATTTCCCCGGTCTaGCCGTCCCGACAGTTGAGTGGATCGCTGCAGTCCCCGGCGAGA | + |
Preference number: 5 (lower is better) Translates to: ALGSILMHLALISPV*PSRQLSGSLQSPAR Trigger: TCTCGCCGGGGACTGCAGCGATCCACTCAACTGTCGGGACGGCCAGACCGGGGAAATGAGGGCGAGATGCATAAGGATCGAGCCAAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CAA 90 bp | AAGTCCAGGAGCACCCACGGGAACAACCGTGTCTCTCACCCAGCCCTCTCCCCTGGACACAGCTCCCACTaGCTTGGCCAGCACAGTACC | + |
Preference number: 5 (lower is better) Translates to: KSRSTHGNNRVSHPALSPGHSSH*LGQHST Trigger: GGTACTGTGCTGGCCAAGCAAGTGGGAGCTGTGTCC...AGGGGAGAGGGCTGGGTGAGAGACACGGTTGTTCCCGTGGGTGCTCCTGGACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS TCA 90 bp | TTATGCATCTCGCCCTCATTTCCCCGGTCTGGCCGTCCCGACAGTTaGGTGGATCGCTGCAGTCCCCGGCGAGAGTCAGTACGACGTAGC | + |
Preference number: 5 (lower is better) Translates to: LCISPSFPRSGRPDS*VDRCSPRRESVRRS Trigger: GCTACGTCGTACTGACTCTCGCCGGGGACTGCAGCGATCCACTCAACTGTCGGGACGGCCAGACCGGGGAAATGAGGGCGAGATGCATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 90 bp | CAGTACGACGTAGCTGCCTATGGCCACGGCCGAGAGAAGCCACTGTaGCCACATGGAAGACATCCCGGACACTGCGCTCAGAAGATCGGG | + |
Preference number: 5 (lower is better) Translates to: QYDVAAYGHGREKPL*PHGRHPGHCAQKIG Trigger: CCCGATCTTCTGAGCGCAGTGTCCGGGATGTCTTCCATGTGGCCACAGTGGCTTCTCTCGGCCGTGGCCATAGGCAGCTACGTCGTACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CAA 90 bp | AAGTCCAGGAGCACCCACGGGAACAACCGTGTCTCTCACCCAGCCCTCTCCCCTCCAACCAGCACCACCTaGGCATTGGGGCAAAACTCC | + |
Preference number: 5 (lower is better) Translates to: KSRSTHGNNRVSHPALSPPTSTT*ALGQNS Trigger: GGAGTTTTGCCCCAATGCCAAGGTGGTGCTGGTTGG...AGGGGAGAGGGCTGGGTGAGAGACACGGTTGTTCCCGTGGGTGCTCCTGGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 90 bp | CGTAGCTGCCTATGGCCACGGCCGAGAGAAGCCACTGTGGCCACATaGAAGACATCCCGGACACTGCGCTCAGAAGATCGGGAGGAACAT | + |
Preference number: 5 (lower is better) Translates to: RSCLWPRPREATVAT*KTSRTLRSEDREEH Trigger: ATGTTCCTCCCGATCTTCTGAGCGCAGTGTCCGGGATGTCTTCCATGTGGCCACAGTGGCTTCTCTCGGCCGTGGCCATAGGCAGCTACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS GCA 90 bp | GGCCGAGAGAAGCCACTGTGGCCACATGGAAGACATCCCGGACACTaGGCTCAGAAGATCGGGAGGAACATTCAACGTAGGACACAGCTC | + |
Preference number: 5 (lower is better) Translates to: GREKPLWPHGRHPGH*AQKIGRNIQRRTQL Trigger: GAGCTGTGTCCTACGTTGAATGTTCCTCCCGATCTTCTGAGCGCAGTGTCCGGGATGTCTTCCATGTGGCCACAGTGGCTTCTCTCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CAA 90 bp | AAGGGTGTAGAGAATGGGGTGAGGAGTGACAGCCTTCTACCCTCTAGCTCCTCCCTCCTGAGTCTCTCCTaGCCACTTCTTGAGGACACT | + |
Preference number: 5 (lower is better) Translates to: KGVENGVRSDSLLPSSSSLLSLS*PLLEDT Trigger: AGTGTCCTCAAGAAGTGGCAAGGAGAGACTCAGGAG...GGAGGAGCTAGAGGGTAGAAGGCTGTCACTCCTCACCCCATTCTCTACACCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CAA 90 bp | AGAAAGGGCAAGCTAGAACTGGTTGGTGGGTTGATGGGAGGAAAGAGCTTCTTGGAAGTATCCCACATGTaGAGCTCAATGCGGCGCTTG | + |
Preference number: 5 (lower is better) Translates to: RKGKLELVGGLMGGKSFLEVSHM*SSMRRL Trigger: CAAGCGCCGCATTGAGCTCAACATGTGGGATACTTC...CAAGAAGCTCTTTCCTCCCATCAACCCACCAACCAGTTCTAGCTTGCCCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CAA 90 bp | TGGGATATGGGGACCAGGGTATGCAAGGAAGTTACACTTTACATAGGAGACTCAGGGATGAGTCTCTGCTaGGATAGCTCCCTCAGTGTG | + |
Preference number: 5 (lower is better) Translates to: WDMGTRVCKEVTLYIGDSGMSLC*DSSLSV Trigger: CACACTGAGGGAGCTATCCAAGCAGAGACTCATCCC...TGAGTCTCCTATGTAAAGTGTAACTTCCTTGCATACCCTGGTCCCCATATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CAA 90 bp | GTATGCAAGGAAGTTACACTTTACATAGGAGACTCAACCAAAGTCATTGCTTGGTGGCCGTCCCGACAGTaGAGTGGATCGCTGCAGTCC | + |
Preference number: 5 (lower is better) Translates to: VCKEVTLYIGDSTKVIAWWPSRQ*SGSLQS Trigger: GGACTGCAGCGATCCACTCAACTGTCGGGACGGCCA...CCAAGCAATGACTTTGGTTGAGTCTCCTATGTAAAGTGTAACTTCCTTGCATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CAA 90 bp | AGAAAGGGCAAGCTAGAACTGGTTGGTGGGTTGATGGGAGGAAAGAGCTTCTTGATGAGGTTACAGCTCTaGGCTCGATCCTTATGCATC | + |
Preference number: 5 (lower is better) Translates to: RKGKLELVGGLMGGKSFLMRLQL*ARSLCI Trigger: GATGCATAAGGATCGAGCCAAGAGCTGTAACCTCAT...CAAGAAGCTCTTTCCTCCCATCAACCCACCAACCAGTTCTAGCTTGCCCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS-3UTR CAA 90 bp | AGGGTATGCAAGGAAGTTACACTTTACATAGGAGACTCAACCAAAGTCATTGCTAGCTCAATGCGGCGCTaGTCGATCTCGAAGCTGGCA | + |
Preference number: 5 (lower is better) Translates to: RVCKEVTLYIGDSTKVIASSMRR*SISKLA Trigger: TGCCAGCTTCGAGATCGACAAGCGCCGCATTGAGCT...AGCAATGACTTTGGTTGAGTCTCCTATGTAAAGTGTAACTTCCTTGCATACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS GCA 72 bp | CGCTGCAGTCCCCGGCGAGAGTCAGTACGACGTAGCTaGCTATGGCCACGGCCGAGAGAAGCCACTGTGGCC | + |
Preference number: 6 (lower is better) Translates to: RCSPRRESVRRS*LWPRPREATVA Trigger: GGCCACAGTGGCTTCTCTCGGCCGTGGCCATAGGCAGCTACGTCGTACTGACTCTCGCCGGGGACTGCAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CAA 72 bp | CTCGCCCTCATTTCCCCGGTCTGGCCGTCCCGACAGTaGAGTGGATCGCTGCAGTCCCCGGCGAGAGTCAGT | + |
Preference number: 6 (lower is better) Translates to: LALISPVWPSRQ*SGSLQSPARVS Trigger: ACTGACTCTCGCCGGGGACTGCAGCGATCCACTCAACTGTCGGGACGGCCAGACCGGGGAAATGAGGGCGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS TCA 72 bp | TCGCCCTCATTTCCCCGGTCTGGCCGTCCCGACAGTTaGGTGGATCGCTGCAGTCCCCGGCGAGAGTCAGTA | + |
Preference number: 6 (lower is better) Translates to: SPSFPRSGRPDS*VDRCSPRRESV Trigger: TACTGACTCTCGCCGGGGACTGCAGCGATCCACTCAACTGTCGGGACGGCCAGACCGGGGAAATGAGGGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 72 bp | AGTCCCCGGCGAGAGTCAGTACGACGTAGCTGCCTATaGCCACGGCCGAGAGAAGCCACTGTGGCCACATGG | + |
Preference number: 6 (lower is better) Translates to: SPRRESVRRSCL*PRPREATVATW Trigger: CCATGTGGCCACAGTGGCTTCTCTCGGCCGTGGCCATAGGCAGCTACGTCGTACTGACTCTCGCCGGGGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 72 bp | CCTCATTTCCCCGGTCTGGCCGTCCCGACAGTTGAGTaGATCGCTGCAGTCCCCGGCGAGAGTCAGTACGAC | + |
Preference number: 6 (lower is better) Translates to: PHFPGLAVPTVE*IAAVPGESQYD Trigger: GTCGTACTGACTCTCGCCGGGGACTGCAGCGATCCACTCAACTGTCGGGACGGCCAGACCGGGGAAATGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 72 bp | ACACCGTGGGGACATAACTCCCGGGGTAGGCGTCCTTaGCGAACACCTGCAGCAACGCTGTCTTGCCGCACT | + |
Preference number: 6 (lower is better) Translates to: TPWGHNSRGRRP*RTPAATLSCRT Trigger: AGTGCGGCAAGACAGCGTTGCTGCAGGTGTTCGCCAAGGACGCCTACCCCGGGAGTTATGTCCCCACGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 72 bp | GTAGCTGCCTATGGCCACGGCCGAGAGAAGCCACTGTaGCCACATGGAAGACATCCCGGACACTGCGCTCAG | + |
Preference number: 6 (lower is better) Translates to: VAAYGHGREKPL*PHGRHPGHCAQ Trigger: CTGAGCGCAGTGTCCGGGATGTCTTCCATGTGGCCACAGTGGCTTCTCTCGGCCGTGGCCATAGGCAGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 72 bp | TCGATCCTTATGCATCTCGCCCTCATTTCCCCGGTCTaGCCGTCCCGACAGTTGAGTGGATCGCTGCAGTCC | + |
Preference number: 6 (lower is better) Translates to: SILMHLALISPV*PSRQLSGSLQS Trigger: GGACTGCAGCGATCCACTCAACTGTCGGGACGGCCAGACCGGGGAAATGAGGGCGAGATGCATAAGGATCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 72 bp | TCCGCATGTCCAGCTTACAGCCAACCAGCACCACCTTaGCATTGGGGCAAAACTCCTGAGTCTCTCCTTGCC | + |
Preference number: 6 (lower is better) Translates to: SACPAYSQPAPP*HWGKTPESLLA Trigger: GGCAAGGAGAGACTCAGGAGTTTTGCCCCAATGCCAAGGTGGTGCTGGTTGGCTGTAAGCTGGACATGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS TCA 72 bp | CCAACCAGCACCACCTTGGCATTGGGGCAAAACTCCTaGGTCTCTCCTTGCCACTTCTTGAGGACACTGTCC | + |
Preference number: 6 (lower is better) Translates to: PTSTTLALGQNS*VSPCHFLRTLS Trigger: GGACAGTGTCCTCAAGAAGTGGCAAGGAGAGACTCAGGAGTTTTGCCCCAATGCCAAGGTGGTGCTGGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS GCA 72 bp | AAGCCACTGTGGCCACATGGAAGACATCCCGGACACTaGGCTCAGAAGATCGGGAGGAACATTCAACGTAGG | + |
Preference number: 6 (lower is better) Translates to: KPLWPHGRHPGH*AQKIGRNIQRR Trigger: CCTACGTTGAATGTTCCTCCCGATCTTCTGAGCGCAGTGTCCGGGATGTCTTCCATGTGGCCACAGTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CAA 72 bp | TCGGGAGGAACATTCAACGTAGGACACAGCTCCCACTaGCTTGGCCAGCACAGTACCCTGCTCATGTGTGAC | + |
Preference number: 6 (lower is better) Translates to: SGGTFNVGHSSH*LGQHSTLLMCD Trigger: GTCACACATGAGCAGGGTACTGTGCTGGCCAAGCAAGTGGGAGCTGTGTCCTACGTTGAATGTTCCTCCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CAA 90 bp | CTCAGAAGATCGGGAGGAACATTCAACGTAGGACACAGCTCCCACTaGCTTGGCCAGCACAGTACCCTGCTCATGTGTGACAGGGATGAG | + |
Preference number: 6 (lower is better) Translates to: LRRSGGTFNVGHSSH*LGQHSTLLMCDRDE Trigger: CTCATCCCTGTCACACATGAGCAGGGTACTGTGCTGGCCAAGCAAGTGGGAGCTGTGTCCTACGTTGAATGTTCCTCCCGATCTTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 72 bp | TGTCCAGCTTACAGCCAACCAGCACCACCTTGGCATTaGGGCAAAACTCCTGAGTCTCTCCTTGCCACTTCT | + |
Preference number: 6 (lower is better) Translates to: CPAYSQPAPPWH*GKTPESLLATS Trigger: AGAAGTGGCAAGGAGAGACTCAGGAGTTTTGCCCCAATGCCAAGGTGGTGCTGGTTGGCTGTAAGCTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS TCA 72 bp | TGTCATAGTAAGAGGAACCTGAAGTATCCCACATGTTaGGCTCAATGCGGCGCTTGTCGATCTCGAAGCTGG | + |
Preference number: 6 (lower is better) Translates to: CHSKRNLKYPTC*AQCGACRSRSW Trigger: CCAGCTTCGAGATCGACAAGCGCCGCATTGAGCTCAACATGTGGGATACTTCAGGTTCCTCTTACTATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |
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CDS CCA 72 bp | TCCTTGCCACTTCTTGAGGACACTGTCCAGTGTTTCTaGCCGGCTAATGTCAAAGCAGATAAGCACAGCATC | + |
Preference number: 6 (lower is better) Translates to: SLPLLEDTVQCF*PANVKADKHSI Trigger: GATGCTGTGCTTATCTGCTTTGACATTAGCCGGCCAGAAACACTGGACAGTGTCCTCAAGAAGTGGCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001347.7 |