Pregenerated sensors for RNASEL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066800Ensembl transcript IDs: ENSMUST00000086209.10, ENSMUST00000182538.3, ENSMUST00000182722.8, ENSMUST00000183241.8
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCATTTCAGATCCAGCAGCAAGAAAGCACACCCACATCGTTCTTCTaGGGGTGTTCAATGCACTCCACAGCCCTGAGTCCAGGGCCGGCC | + |
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Preference number: 1 (lower is better) Translates to: SFQIQQQESTPTSFF*GCSMHSTALSPGPA Trigger: GGCCGGCCCTGGACTCAGGGCTGTGGAGTGCATTGAACACCCCCAGAAGAACGATGTGGGTGTGCTTTCTTGCTGCTGGATCTGAAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR CCA 90 bp | CTCTGTGTAGCCTTGGCTGTCCTGAACTCACTCTGTAGACCAGGCTaGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: LCVALAVLNSLCRPG*PRTQKSTCLCLPSA Trigger: AGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCAGGACAGCCAAGGCTACACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR GCA 90 bp | GGAAGTGGGGGAAATGAGGGCTCTCAAGTGGACACCAAAAGGAGCTaGTTCATTTCAGATCCAGCAGCAAGAAAGCACACCCACATCGTT | + |
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Preference number: 1 (lower is better) Translates to: GSGGNEGSQVDTKRS*FISDPAARKHTHIV Trigger: AACGATGTGGGTGTGCTTTCTTGCTGCTGGATCTGAAATGAAGCAGCTCCTTTTGGTGTCCACTTGAGAGCCCTCATTTCCCCCACTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR GCA 90 bp | CTTTTGGCATATGTAAGCCTATTCTGGAATTTCATACAGAAGAGATaGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LLAYVSLFWNFIQKR*SVCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACACACACAGAGCATCTCTTCTGTATGAAATTCCAGAATAGGCTTACATATGCCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR TCA 90 bp | GCTTTTGTGATCATGCAAATGTGTAGAACATACTGTATCAGAAACTaGCACACTGACTGTCTAACTCATTGCTCACAAGTAACCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: AFVIMQMCRTYCIRN*HTDCLTHCSQVTRL Trigger: CAGCCTGGTTACTTGTGAGCAATGAGTTAGACAGTCAGTGTGTCAGTTTCTGATACAGTATGTTCTACACATTTGCATGATCACAAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR TCA 90 bp | TCTCTTGCAACCTTTATATGGGTTCCAGAGATTGAATTCATGTTGTaGGGCTTATCTGACAATACACACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: SLATFIWVPEIEFML*GLSDNTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTATTGTCAGATAAGCCTCACAACATGAATTCAATCTCTGGAACCCATATAAAGGTTGCAAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR-3UTR TCA 90 bp | GAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGAACTCACTCTGTAGACCATGCACTCCACAGCCCTaGGTCCAGGGCCGGCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: ETGFLCVALAVLNSLCRPCTPQP*VQGRPR Trigger: TCTTGGCCGGCCCTGGACTCAGGGCTGTGGAGTGCA...TGGTCTACAGAGTGAGTTCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR-3UTR TCA 90 bp | TTCAATGCACTCCACAGCCCTGAGTCCAGGGCCGGCCAAGAAGTGTTCCAATCCATTAACTTGAAGTCATaGGACACCGGTACAGATGCC | + |
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Preference number: 2 (lower is better) Translates to: FNALHSPESRAGQEVFQSINLKS*DTGTDA Trigger: GGCATCTGTACCGGTGTCTCATGACTTCAAGTTAAT...GGATTGGAACACTTCTTGGCCGGCCCTGGACTCAGGGCTGTGGAGTGCATTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR-3UTR CCA 90 bp | CGTGCATCCCCGGAATGTTTGCTGGCACCGCTGGTTCCTCCTTGCTCAAGGCCAATACTGAAGCTTTTCTaGAGCCCTTTTGGCATATGT | + |
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Preference number: 2 (lower is better) Translates to: RASPECLLAPLVPPCSRPILKLF*SPFGIC Trigger: ACATATGCCAAAAGGGCTCCAGAAAAGCTTCAGTAT...TGGCCTTGAGCAAGGAGGAACCAGCGGTGCCAGCAAACATTCCGGGGATGCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCCGGCCAAGAAGTGTTCCAATCCTTTCAGACAGTCTTTCTCCACCTCAGAGACACCGGTACAGATaGCTCCAGAAAGAATGGAAT | + |
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Preference number: 2 (lower is better) Translates to: QGRPRSVPILSDSLSPPQRHRYR*LQKEWN Trigger: ATTCCATTCTTTCTGGAGGCATCTGTACCGGTGTCT...CTGAGGTGGAGAAAGACTGTCTGAAAGGATTGGAACACTTCTTGGCCGGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR-3UTR CCA 90 bp | GAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGAACTCACTCTGTAGACCAAGGGGCACACAATTGTaGAGTTGGTTTTCTCTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ETGFLCVALAVLNSLCRPRGTQL*SWFSLA Trigger: TGCAAGAGAAAACCAACTCCACAATTGTGTGCCCCT...TGGTCTACAGAGTGAGTTCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR-3UTR CCA 90 bp | GAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGAACTCACTCTGTAGACCAAAGAACTCTGCTGATTaGAAAAATGGTCCCATGAGC | + |
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Preference number: 2 (lower is better) Translates to: ETGFLCVALAVLNSLCRPKNSAD*KNGPMS Trigger: GCTCATGGGACCATTTTTCCAATCAGCAGAGTTCTT...TGGTCTACAGAGTGAGTTCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR-3UTR TCA 90 bp | TCAGACAGTCTTTCTCCACCTCAGCACCAACTGATATGTCATCTGCCTAGTGTGAGCATACTGCTTTTGTaGTCATGCAAATGTGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: SDSLSPPQHQLICHLPSVSILLL*SCKCVE Trigger: TTCTACACATTTGCATGATCACAAAAGCAGTATGCT...CACACTAGGCAGATGACATATCAGTTGGTGCTGAGGTGGAGAAAGACTGTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR CAA 90 bp | TGTGGAGTTGGTTTTCTCTTGCAACCTTTATATGGGTTCCAGAGATaGAATTCATGTTGTGAGGCTTATCTGACAATACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: CGVGFLLQPLYGFQR*NSCCEAYLTIHTHT Trigger: TGTGTGTGTGTGTATTGTCAGATAAGCCTCACAACATGAATTCAATCTCTGGAACCCATATAAAGGTTGCAAGAGAAAACCAACTCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR-3UTR CCA 90 bp | CCTATTCTGGAATTTCATACAGAAGAGATGCTCTGTGTGTGTGTGTGTGTGTGTACACAATTGTGGAGTTaGTTTTCTCTTGCAACCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PILEFHTEEMLCVCVCVCTQLWS*FSLATF Trigger: AAAGGTTGCAAGAGAAAACCAACTCCACAATTGTGT...ACACACACACACACACACACAGAGCATCTCTTCTGTATGAAATTCCAGAATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR GCA 72 bp | ATTGTGGGTAGCTGCTTCGTGCATCCCCGGAATGTTTaGTGGCACCGCTGGTTCCTCCTTGCTCAAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: IVGSCFVHPRNV*WHRWFLLAQGQ Trigger: CTGGCCTTGAGCAAGGAGGAACCAGCGGTGCCAGCAAACATTCCGGGGATGCACGAAGCAGCTACCCACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR GCA 72 bp | CATCTGCCTAGTGTGGCATTGTGGGTAGCTGCTTCGTaGATCCCCGGAATGTTTGCTGGCACCGCTGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: HLPSVALWVAAS*IPGMFAGTAGS Trigger: GGAACCAGCGGTGCCAGCAAACATTCCGGGGATGCACGAAGCAGCTACCCACAATGCCACACTAGGCAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR CCA 72 bp | GCCTTGGCTGTCCTGAACTCACTCTGTAGACCAGGCTaGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: ALAVLNSLCRPG*PRTQKSTCLCL Trigger: GAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCAGGACAGCCAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR-3UTR CAA 90 bp | GAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGAACTCACTCTGTAGACCACTGCCTAGTGTGGCATaGTGGGTAGCTGCTTCGTGC | + |
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Preference number: 3 (lower is better) Translates to: ETGFLCVALAVLNSLCRPLPSVA*WVAASC Trigger: GCACGAAGCAGCTACCCACAATGCCACACTAGGCAG...TGGTCTACAGAGTGAGTTCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR CCA 72 bp | ATCCAGCAGCAAGAAAGCACACCCACATCGTTCTTCTaGGGGTGTTCAATGCACTCCACAGCCCTGAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: IQQQESTPTSFF*GCSMHSTALSP Trigger: TGGACTCAGGGCTGTGGAGTGCATTGAACACCCCCAGAAGAACGATGTGGGTGTGCTTTCTTGCTGCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR CCA 72 bp | GAGAGCACCCCAAATAGATCATTGCACCACGGAGCATaGGAAGTGGGGGAAATGAGGGCTCTCAAGTGGACA | + |
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Preference number: 3 (lower is better) Translates to: ESTPNRSLHHGA*EVGEMRALKWT Trigger: TGTCCACTTGAGAGCCCTCATTTCCCCCACTTCCCATGCTCCGTGGTGCAATGATCTATTTGGGGTGCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR-3UTR CAA 90 bp | CGTGCATCCCCGGAATGTTTGCTGGCACCGCTGGTTCCTCCTTGCTCAAGGCCATTTTCTGGAGCCCTTTaGGCATATGTAAGCCTATTC | + |
|
Preference number: 3 (lower is better) Translates to: RASPECLLAPLVPPCSRPFSGAL*AYVSLF Trigger: GAATAGGCTTACATATGCCAAAAGGGCTCCAGAAAA...TGGCCTTGAGCAAGGAGGAACCAGCGGTGCCAGCAAACATTCCGGGGATGCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR-3UTR CAA 90 bp | AGTCTTTCTCCACCTCAGCACCAACTGATATGTCATCTGCCTAGTGTGGCATTGACCGCTGGTTCCTCCTaGCTCAAGGCCAGTAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: SLSPPQHQLICHLPSVALTAGSS*LKASSA Trigger: GGCACTACTGGCCTTGAGCAAGGAGGAACCAGCGGT...CAATGCCACACTAGGCAGATGACATATCAGTTGGTGCTGAGGTGGAGAAAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR TCA 72 bp | ACAAAAGGACAAAGTGGAATGAAGCAGGCACTGAGGTaGCAGTGTGTCAGGGAGCTAGAGAGAGCACCCCAA | + |
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Preference number: 3 (lower is better) Translates to: TKGQSGMKQALR*QCVRELERAPQ Trigger: TTGGGGTGCTCTCTCTAGCTCCCTGACACACTGTCACCTCAGTGCCTGCTTCATTCCACTTTGTCCTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR CCA 72 bp | GCTTTGATTGGAGGGCTGGAGTACAAAAGGACAAAGTaGAATGAAGCAGGCACTGAGGTGACAGTGTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: ALIGGLEYKRTK*NEAGTEVTVCQ Trigger: CTGACACACTGTCACCTCAGTGCCTGCTTCATTCCACTTTGTCCTTTTGTACTCCAGCCCTCCAATCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR-3UTR CAA 90 bp | AGTCTTTCTCCACCTCAGCACCAACTGATATGTCATCTGCCTAGTGTGGCATTGCACACAATTGTGGAGTaGGTTTTCTCTTGCAACCTT | + |
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Preference number: 3 (lower is better) Translates to: SLSPPQHQLICHLPSVALHTIVE*VFSCNL Trigger: AAGGTTGCAAGAGAAAACCAACTCCACAATTGTGTG...CAATGCCACACTAGGCAGATGACATATCAGTTGGTGCTGAGGTGGAGAAAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR TCA 72 bp | TTCCAAAAGCTCCACCTTAGCCACCGTGGTGATAGGTaGAAAGAACATCAGATGTCACACCAAAAAGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: FQKLHLSHRGDR*KEHQMSHQKVC Trigger: ACAGACTTTTTGGTGTGACATCTGATGTTCTTTTCACCTATCACCACGGTGGCTAAGGTGGAGCTTTTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR CCA 72 bp | GGCTTATACAGTGCCCAGCAAATACTGAAGCTTTTCTaGAGCCCTTTTGGCATATGTAAGCCTATTCTGGAA | + |
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Preference number: 3 (lower is better) Translates to: GLYSAQQILKLF*SPFGICKPILE Trigger: TTCCAGAATAGGCTTACATATGCCAAAAGGGCTCCAGAAAAGCTTCAGTATTTGCTGGGCACTGTATAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR GCA 72 bp | TATGTAAGCCTATTCTGGAATTTCATACAGAAGAGATaGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: YVSLFWNFIQKR*SVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACAGAGCATCTCTTCTGTATGAAATTCCAGAATAGGCTTACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR TCA 72 bp | TATCATCATCATCATCCACATACAAAAAGGGTCCATTaGTTATTCAGTGAAAATGTGTCAAGCATCACCACA | + |
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Preference number: 3 (lower is better) Translates to: YHHHHPHTKRVH*LFSENVSSITT Trigger: TGTGGTGATGCTTGACACATTTTCACTGAATAATCAATGGACCCTTTTTGTATGTGGATGATGATGATGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| CDS-3UTR CCA 90 bp | CGTGCATCCCCGGAATGTTTGCTGGCACCGCTGGTTCCTCCTTGCTCAAGGCCAGCGTGGTGGAGGCTGTaGGAAGTGTTTTCTGTATTC | + |
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Preference number: 4 (lower is better) Translates to: RASPECLLAPLVPPCSRPAWWRL*EVFSVF Trigger: GAATACAGAAAACACTTCCCACAGCCTCCACCACGC...TGGCCTTGAGCAAGGAGGAACCAGCGGTGCCAGCAAACATTCCGGGGATGCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| CDS-3UTR TCA 90 bp | GGGGCACACAATTGTGGAGTTGGTTTTCTCTTGCAACCTTTATATGGGTTCCAGCTGCCTCTGGAACGCTaGGGCGTGGTGGAGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GAHNCGVGFLLQPLYGFQLPLER*GVVEAV Trigger: CACAGCCTCCACCACGCCTCAGCGTTCCAGAGGCAG...CTGGAACCCATATAAAGGTTGCAAGAGAAAACCAACTCCACAATTGTGTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| CDS-3UTR CCA 90 bp | GCATCCCCGGAATGTTTGCTGGCACCGCTGGTTCCTCCTTGCTCAAGGCCAGTAACTGGTCAAAGCTTCTaGGAGGCTCAAGTGTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: ASPECLLAPLVPPCSRPVTGQSF*EAQVSD Trigger: ATCAGACACTTGAGCCTCCCAGAAGCTTTGACCAGT...TACTGGCCTTGAGCAAGGAGGAACCAGCGGTGCCAGCAAACATTCCGGGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| 3UTR CAA 72 bp | TGTCAGGGAGCTAGAGAGAGCACCCCAAATAGATCATaGCACCACGGAGCATGGGAAGTGGGGGAAATGAGG | + |
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Preference number: 4 (lower is better) Translates to: CQGARESTPNRS*HHGAWEVGEMR Trigger: CCTCATTTCCCCCACTTCCCATGCTCCGTGGTGCAATGATCTATTTGGGGTGCTCTCTCTAGCTCCCTGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| CDS-3UTR CCA 90 bp | AGTGCCCAGCAAATACTGAAGCTTTTCTGGAGCCCTTTTGGCATATGTAAGCCTGCTCTGTATGCCCCCTaGTCCCACTGCCTCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SAQQILKLFWSPFGICKPALYAP*SHCLWN Trigger: GTTCCAGAGGCAGTGGGACCAGGGGGCATACAGAGC...AGGCTTACATATGCCAAAAGGGCTCCAGAAAAGCTTCAGTATTTGCTGGGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| CDS-3UTR TCA 90 bp | CTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACCTGCCTCTGGAACGCTaGGGCGTGGTGGAGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LTHCSQVTRLLKRPEMYNLPLER*GVVEAV Trigger: CACAGCCTCCACCACGCCTCAGCGTTCCAGAGGCAG...GTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
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| 3UTR CAA 72 bp | CAGCACCAACTGATATGTCATCTGCCTAGTGTGGCATaGTGGGTAGCTGCTTCGTGCATCCCCGGAATGTTT | + |
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Preference number: 4 (lower is better) Translates to: QHQLICHLPSVA*WVAASCIPGMF Trigger: AAACATTCCGGGGATGCACGAAGCAGCTACCCACAATGCCACACTAGGCAGATGACATATCAGTTGGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| CDS-3UTR GCA 90 bp | GTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGGCTTGCACTGCGTTGTaGAAAGGTGTCCAGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VTRLLKRPEMYNFPRTLLACTAL*KGVQPQ Trigger: CTGGGGCTGGACACCTTTGCACAACGCAGTGCAAGC...CAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR TCA 90 bp | GTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGCCTCCAAGTCTCTCCTaGCCATCTGTGACTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VTRLLKRPEMYNFPRTLLPPSLS*PSVTLP Trigger: TGGGAGAGTCACAGATGGTCAGGAGAGACTTGGAGG...CAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
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| CDS-3UTR CCA 90 bp | GTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGAACGCTGAGGCGTGGTaGAGGCTGTGGGAAGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: VTRLLKRPEMYNFPRTLLNAEAW*RLWEVF Trigger: AAACACTTCCCACAGCCTCCACCACGCCTCAGCGTT...CAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
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| CDS-3UTR CCA 90 bp | ACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCTGGAACGCTGAGGCGTaGTGGAGGCTGTGGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: THCSQVTRLLKRPEMYNFWNAEA*WRLWEV Trigger: CACTTCCCACAGCCTCCACCACGCCTCAGCGTTCCA...GAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
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| CDS-3UTR CCA 90 bp | TGTCTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACGCTCTGTATGCCCCCTaGTCCCACTGCCTCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: CLTHCSQVTRLLKRPEMYALYAP*SHCLWN Trigger: GTTCCAGAGGCAGTGGGACCAGGGGGCATACAGAGC...GTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
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| CDS-3UTR CCA 90 bp | CTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAATGGAACGCTGAGGCGTaGTGGAGGCTGTGGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LLKRPEMYNFPRTLLIGKWNAEA*WRLWEV Trigger: CACTTCCCACAGCCTCCACCACGCCTCAGCGTTCCA...TTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
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| CDS-3UTR GCA 90 bp | ACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGTGCTTCCTCTCCACTaGTGCGATGAGGGGTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: TRLLKRPEMYNFPRTLLIVLPLH*CDEGCF Trigger: AAAACACCCCTCATCGCAGCAGTGGAGAGGAAGCAC...AATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR GCA 90 bp | CTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAATGCACCAAGCCTGTGTaGTTCCTCTCCACTGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: LLKRPEMYNFPRTLLIGKCTKPV*FLSTAA Trigger: CGCAGCAGTGGAGAGGAAGCACACAGGCTTGGTGCA...TTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR TCA 90 bp | CTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAAATGTCGACAACGGTCCTCTaGCTTCCCGCTGATGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LKRPEMYNFPRTLLIGKMSTTVL*LPADGV Trigger: AACCCCATCAGCGGGAAGTCAGAGGACCGTTGTCGA...CATTTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR TCA 90 bp | GTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGGGAGAAAACAGGCAATaGATGAGGTCCTTAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTRLLKRPEMYNFPRTLLGENRQ*MRSLVS Trigger: GGAGACTAAGGACCTCATTCATTGCCTGTTTTCTCC...CAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
||
| CDS-3UTR TCA 90 bp | GGGGCACACAATTGTGGAGTTGGTTTTCTCTTGCAACCTTTATATGGGTTCCAGCTACCAGGCAGTTCTTaGCATTTTCTCCAGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GAHNCGVGFLLQPLYGFQLPGSS*HFLQEK Trigger: TTTCTCCTGGAGAAAATGTCAAGAACTGCCTGGTAG...CTGGAACCCATATAAAGGTTGCAAGAGAAAACCAACTCCACAATTGTGTGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACTCTCGTCACACTCATTaGCGTCTGCACCACAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLTHCSQVTRLLKRPEMYSRHTH*RLHHKR Trigger: TCTCTTGTGGTGCAGACGTCAATGAGTGTGACGAGA...GTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| CDS-3UTR TCA 90 bp | CTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAATCTCCACTGCTGCGATaGGGGGTGTTTTCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKRPEMYNFPRTLLIGKSPLLR*GVFSLF Trigger: AAAGAGGGAAAACACCCCTCATCGCAGCAGTGGAGA...TTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAAATGCCTCCAAGTCTCTCCTaGCCATCTGTGACTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKRPEMYNFPRTLLIGKMPPSLS*PSVTLP Trigger: TGGGAGAGTCACAGATGGTCAGGAGAGACTTGGAGG...CATTTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAAATGCGACTCAGGAGCATCTaGACCAAGCCTGTGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKRPEMYNFPRTLLIGKMRLRSI*TKPVCF Trigger: GAAGCACACAGGCTTGGTGCAGATGCTCCTGAGTCG...CATTTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| CDS-3UTR CCA 90 bp | CTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACGGTCGAGTCATACTGTaGAGGCTTTTCAAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTHCSQVTRLLKRPEMYNGRVIL*RLFKAV Trigger: GACAGCCTTGAAAAGCCTCCACAGTATGACTCGACC...GTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| CDS-3UTR CCA 90 bp | TGTCTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACGCGTGGTGGAGGCTGTaGGAAGTGTTTTCTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: CLTHCSQVTRLLKRPEMYAWWRL*EVFSVF Trigger: GAATACAGAAAACACTTCCCACAGCCTCCACCACGC...GTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
||
| CDS-3UTR TCA 90 bp | GTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGACAACATCTCCCTTCTaGACAGCTTTGATCAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTRLLKRPEMYNFPRTLLTTSPF*TALINE Trigger: TTCGTTGATCAAAGCTGTTCAGAAGGGAGATGTTGT...CAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAAATGATCCATCGGATGCTCTaGTCAAAATCTGCCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LKRPEMYNFPRTLLIGKMIHRML*SKSASR Trigger: CCGGCTGGCAGATTTTGATCAGAGCATCCGATGGAT...CATTTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| CDS-3UTR TCA 90 bp | AGTGCCCAGCAAATACTGAAGCTTTTCTGGAGCCCTTTTGGCATATGTAAGCCTAGCACTTCATCATTCTaGGTCTTTAGTGTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAQQILKLFWSPFGICKPSTSSF*VFSVSK Trigger: CTTTGAGACACTAAAGACTCAGAATGATGAAGTGCT...AGGCTTACATATGCCAAAAGGGCTCCAGAAAAGCTTCAGTATTTGCTGGGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
||
| CDS-3UTR GCA 90 bp | TGTCTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACTGGCATCTATGTTTATaGCTTCCCGACTCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLTHCSQVTRLLKRPEMYWHLCL*LPDSGA Trigger: TGCTCCTGAGTCGGGAAGGCATAAACATAGATGCCA...GTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| CDS-3UTR CCA 90 bp | GTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGAGTCATGATTCCTCCTaGCTATCCAAACAAGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: VTRLLKRPEMYNFPRTLLSHDSS*LSKQDR Trigger: ACGATCTTGTTTGGATAGCCAGGAGGAATCATGACT...CAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR CCA 90 bp | CTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACACTGGTCAAAGCTTCTaGGAGGCTCAAGTGTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTHCSQVTRLLKRPEMYNTGQSF*EAQVSD Trigger: ATCAGACACTTGAGCCTCCCAGAAGCTTTGACCAGT...GTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
||
| CDS-3UTR TCA 90 bp | CTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAAACAATTGCTGGACCCTaGCAACATCTCCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLKRPEMYNFPRTLLIGKTIAGP*QHLPSE Trigger: TTCAGAAGGGAGATGTTGTCAGGGTCCAGCAATTGT...TTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR TCA 90 bp | CTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACCTGCCTTCATGTCATTaGGGAGAATTCTCAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LTHCSQVTRLLKRPEMYNLPSCH*GEFSGL Trigger: AAGTCCTGAGAATTCTCCTCAATGACATGAAGGCAG...GTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAAATGTGTGGTTGCAGGTCCTaGTGGGAATATCCATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKRPEMYNFPRTLLIGKMCGCRS*WEYPCK Trigger: CTTGCATGGATATTCCCATCAGGACCTGCAACCACA...CATTTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| CDS-3UTR TCA 90 bp | ACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCCTACCAGGCAGTTCTTaGCATTTTCTCCAGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: THCSQVTRLLKRPEMYNFLPGSS*HFLQEK Trigger: TTTCTCCTGGAGAAAATGTCAAGAACTGCCTGGTAG...GAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
||
| CDS-3UTR GCA 90 bp | GTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGCCTTTTTCTAACAATTaGTGGACCCTGACAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: VTRLLKRPEMYNFPRTLLPFSNN*WTLTTS Trigger: AGATGTTGTCAGGGTCCAGCAATTGTTAGAAAAAGG...CAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR GCA 90 bp | TGTCTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACACACTCATTGACGTCTaGACCACAAGAGAGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLTHCSQVTRLLKRPEMYTLIDV*TTREEN Trigger: ATTCTCCTCTCTTGTGGTGCAGACGTCAATGAGTGT...GTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| CDS-3UTR CCA 90 bp | CTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTGTCTTCACAGGCATTaGCATCAGCCCCTTTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LTHCSQVTRLLKRPEMYNCLHRH*HQPLFL Trigger: TAGAAAAAGGGGCTGATGCCAATGCCTGTGAAGACA...GTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| CDS-3UTR CCA 90 bp | ACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCAGTTTCACATCTCCCTaGATCCCAGCAATGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: THCSQVTRLLKRPEMYNFSFTSP*IPAMMK Trigger: CTTCATCATTGCTGGGATCCAGGGAGATGTGAAACT...GAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR TCA 90 bp | TTATATGGGTTCCAGAGATTGAATTCATGTTGTGAGGCTTATCTGACAATACACGGAGAAAACAGGCAATaGATGAGGTCCTTAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYGFQRLNSCCEAYLTIHGENRQ*MRSLVS Trigger: GGAGACTAAGGACCTCATTCATTGCCTGTTTTCTCC...GTGTATTGTCAGATAAGCCTCACAACATGAATTCAATCTCTGGAACCCATATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| CDS-3UTR GCA 90 bp | CTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAAATGGCTCTGATCAAAATCTaGCAGCCGGACAGCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKRPEMYNFPRTLLIGKMALIKI*QPDSFL Trigger: AAGAAAGCTGTCCGGCTGGCAGATTTTGATCAGAGC...CATTTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR CCA 90 bp | ACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCTTTTCTAACAATTGCTaGACCCTGACAACATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: THCSQVTRLLKRPEMYNFFSNNC*TLTTSP Trigger: GGGAGATGTTGTCAGGGTCCAGCAATTGTTAGAAAA...GAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR CCA 90 bp | CTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAATGCCCTCGTTATCCCTaGCATCTATGTTTATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKRPEMYNFPRTLLIGKCPRYP*HLCLCL Trigger: AAGGCATAAACATAGATGCCAGGGATAACGAGGGCA...TTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR TCA 90 bp | TGTCTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACCCTTCTGAACAGCTTTaGTCAACGAAGAATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLTHCSQVTRLLKRPEMYPSEQL*STKNHL Trigger: AAGATGATTCTTCGTTGATCAAAGCTGTTCAGAAGG...GTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR TCA 90 bp | ACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCAGCACTTCATCATTCTaGGTCTTTAGTGTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: THCSQVTRLLKRPEMYNFSTSSF*VFSVSK Trigger: CTTTGAGACACTAAAGACTCAGAATGATGAAGTGCT...GAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
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| CDS-3UTR CCA 90 bp | GTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGTTTTCAAGAAGCAACTaGACAATTTCCTTCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTRLLKRPEMYNFPRTLLFSRSN*TISFSC Trigger: ACAACTGAAGGAAATTGTCCAGTTGCTTCTTGAAAA...CAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| 3UTR CAA 72 bp | GGTTTTCTCTTGCAACCTTTATATGGGTTCCAGAGATaGAATTCATGTTGTGAGGCTTATCTGACAATACAC | + |
|
Preference number: 4 (lower is better) Translates to: GFLLQPLYGFQR*NSCCEAYLTIH Trigger: GTGTATTGTCAGATAAGCCTCACAACATGAATTCAATCTCTGGAACCCATATAAAGGTTGCAAGAGAAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| CDS TCA 90 bp | GGGTCGAGTCATACTGTGGAGGCTTTTCAAGGCTGTCCCCCAACGTaGACTGTGAGGCGACCAGTCTCCAGCAGGAGGGTCGGTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSHTVEAFQGCPPT*TVRRPVSSRRVGVR Trigger: CCTGACACCGACCCTCCTGCTGGAGACTGGTCGCCTCACAGTTCACGTTGGGGGACAGCCTTGAAAAGCCTCCACAGTATGACTCGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS TCA 90 bp | GTCATACTGTGGAGGCTTTTCAAGGCTGTCCCCCAACGTGAACTGTaGGGCGACCAGTCTCCAGCAGGAGGGTCGGTGTCAGGATTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VILWRLFKAVPQREL*GDQSPAGGSVSGLA Trigger: AGCTAATCCTGACACCGACCCTCCTGCTGGAGACTGGTCGCCTCACAGTTCACGTTGGGGGACAGCCTTGAAAAGCCTCCACAGTATGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 90 bp | AGGTGGCCCTTCTCAGCAGCGCTCATGAGAGCTGTGGCGCCTCCTTaGTTCAATCGCCTTTTGTCCTTCGTTGTCTGTCGTCGCAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: RWPFSAALMRAVAPP*FNRLLSFVVCRRKF Trigger: GAATTTGCGACGACAGACAACGAAGGACAAAAGGCGATTGAAGCAAGGAGGCGCCACAGCTCTCATGAGCGCTGCTGAGAAGGGCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 90 bp | CCGACTCAGGAGCATCTGCACCAAGCCTGTGTGCTTCCTCTCCACTaGTGCGATGAGGGGTGTTTTCCCTCTTTCTCCTCTCACGTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: PTQEHLHQACVLPLH*CDEGCFPSFSSHVN Trigger: GTTAACGTGAGAGGAGAAAGAGGGAAAACACCCCTCATCGCAGCAGTGGAGAGGAAGCACACAGGCTTGGTGCAGATGCTCCTGAGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CCA 90 bp | ACTTCTGCCTTCATGTCATTGAGGAGAATTCTCAGGACTTCCAGGTaGCCCTTCTCAGCAGCGCTCATGAGAGCTGTGGCGCCTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSAFMSLRRILRTSR*PFSAALMRAVAPPC Trigger: GCAAGGAGGCGCCACAGCTCTCATGAGCGCTGCTGAGAAGGGCCACCTGGAAGTCCTGAGAATTCTCCTCAATGACATGAAGGCAGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS TCA 90 bp | GAGAACCAGCCGTCCAAGATCCTCCAAGTCTCTCCTGACCATCTGTaGCTCTCCCATCCATCGGATGCTCTGATCAAAATCTGCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ENQPSKILQVSPDHL*LSHPSDALIKICQP Trigger: CGGCTGGCAGATTTTGATCAGAGCATCCGATGGATGGGAGAGTCACAGATGGTCAGGAGAGACTTGGAGGATCTTGGACGGCTGGTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 90 bp | TTATCCCTGGCATCTATGTTTATGCCTTCCCGACTCAGGAGCATCTaGACCAAGCCTGTGTGCTTCCTCTCCACTGCTGCGATGAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSLASMFMPSRLRSI*TKPVCFLSTAAMRG Trigger: ACCCCTCATCGCAGCAGTGGAGAGGAAGCACACAGGCTTGGTGCAGATGCTCCTGAGTCGGGAAGGCATAAACATAGATGCCAGGGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
||
| CDS CCA 90 bp | GTGGTCACCGCAGTCCCGCAGACAAGAGACTTCCTTACATCCACGTaGGCTATTCTCACGGAAGACCTTCACAGCCACTTCTCGATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VVTAVPQTRDFLTST*AILTEDLHSHFSIV Trigger: GACAATCGAGAAGTGGCTGTGAAGGTCTTCCGTGAGAATAGCCCACGTGGATGTAAGGAAGTCTCTTGTCTGCGGGACTGCGGTGACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
||
| CDS GCA 90 bp | ATGACTAAGCAGGAGGTTCACAATGTCTACCCTGCCAGCTTGCACTaGGTTGTGCAAAGGTGTCCAGCCCCAGGTGTCTTCACAGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: MTKQEVHNVYPASLH*VVQRCPAPGVFTGI Trigger: AATGCCTGTGAAGACACCTGGGGCTGGACACCTTTGCACAACGCAGTGCAAGCTGGCAGGGTAGACATTGTGAACCTCCTGCTTAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
||
| CDS GCA 90 bp | ACGGATCAGGGCATTTCTGCCCATGTTGTCCCGAGCATCGACTTCTaGCTTCATGTCATTGAGGAGAATTCTCAGGACTTCCAGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TDQGISAHVVPSIDF*LHVIEENSQDFQVA Trigger: GGCCACCTGGAAGTCCTGAGAATTCTCCTCAATGACATGAAGGCAGAAGTCGATGCTCGGGACAACATGGGCAGAAATGCCCTGATCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
||
| CDS GCA 90 bp | TTAGCAGAGCTGTCTTGCCCTCGTTATCCCTGGCATCTATGTTTATaGCTTCCCGACTCAGGAGCATCTGCACCAAGCCTGTGTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAELSCPRYPWHLCL*LPDSGASAPSLCAS Trigger: GGAAGCACACAGGCTTGGTGCAGATGCTCCTGAGTCGGGAAGGCATAAACATAGATGCCAGGGATAACGAGGGCAAGACAGCTCTGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
||
| CDS CCA 90 bp | TCTGCACCACAAGAGAGGAGAATCTCGAGCAGTTTCACATCTCCCTaGATCCCAGCAATGATGAAGGGGGTGGCCCCATTCTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAPQERRISSSFTSP*IPAMMKGVAPFFFL Trigger: GAGGAAGAAGAATGGGGCCACCCCCTTCATCATTGCTGGGATCCAGGGAGATGTGAAACTGCTCGAGATTCTCCTCTCTTGTGGTGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
||
| CDS GCA 90 bp | TTCCATGAAAGCCGTGAATCCGTTCTCGTCACACTCATTGACGTCTaGACCACAAGAGAGGAGAATCTCGAGCAGTTTCACATCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHESRESVLVTLIDV*TTREENLEQFHISL Trigger: CAGGGAGATGTGAAACTGCTCGAGATTCTCCTCTCTTGTGGTGCAGACGTCAATGAGTGTGACGAGAACGGATTCACGGCTTTCATGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
||
| CDS-3UTR CAA 90 bp | ACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCCCAGCTTGCACTGCGTaGTGCAAAGGTGTCCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: THCSQVTRLLKRPEMYNFPACTA*CKGVQP Trigger: GGGCTGGACACCTTTGCACAACGCAGTGCAAGCTGG...GAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
||
| CDS-3UTR CAA 90 bp | TTCAATGCACTCCACAGCCCTGAGTCCAGGGCCGGCCAAGAAGTGTTCCAATCCTTACATTTCCGTACTTaGATGTCAGATTCATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FNALHSPESRAGQEVFQSLHFRT*MSDSFP Trigger: GGGAAATGAATCTGACATCAAAGTACGGAAATGTAA...GGATTGGAACACTTCTTGGCCGGCCCTGGACTCAGGGCTGTGGAGTGCATTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182538.3 |
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| CDS TCA 90 bp | AAGTCTCTCCTGACCATCTGTGACTCTCCCATCCATCGGATGCTCTaGTCAAAATCTGCCAGCCGGACAGCTTTCTTGGAATCTATTAAG | + |
|
Preference number: 5 (lower is better) Translates to: KSLLTICDSPIHRML*SKSASRTAFLESIK Trigger: CTTAATAGATTCCAAGAAAGCTGTCCGGCTGGCAGATTTTGATCAGAGCATCCGATGGATGGGAGAGTCACAGATGGTCAGGAGAGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS TCA 90 bp | GCCCCTTTTTCTAACAATTGCTGGACCCTGACAACATCTCCCTTCTaGACAGCTTTGATCAACGAAGAATCATCTTCGACAACGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: APFSNNCWTLTTSPF*TALINEESSSTTVL Trigger: GAGGACCGTTGTCGAAGATGATTCTTCGTTGATCAAAGCTGTTCAGAAGGGAGATGTTGTCAGGGTCCAGCAATTGTTAGAAAAAGGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS TCA 90 bp | ATCTTAGATGTCCACTGGTCAAAGCTTCTGGGAGGCTCAAGTGTCTaGTGCTGCAGTAGTCTGAGAAGATCACTTTTACATTTCCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: ILDVHWSKLLGGSSV*CCSSLRRSLLHFRT Trigger: AGTACGGAAATGTAAAAGTGATCTTCTCAGACTACTGCAGCATCAGACACTTGAGCCTCCCAGAAGCTTTGACCAGTGGACATCTAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS-3UTR CAA 90 bp | ACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTTCTTCTCGTCACACTCATaGACGTCTGCACCACAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: THCSQVTRLLKRPEMYNFFSSHS*TSAPQE Trigger: CTCTTGTGGTGCAGACGTCAATGAGTGTGACGAGAA...GAAGTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS TCA 90 bp | TTAGTCTCCTCATCTGGAGACATTGTAAGCAGCACTTCATCATTCTaGGTCTTTAGTGTCTCAAAGGGGATCTCACCTTTCATTACCACG | + |
|
Preference number: 5 (lower is better) Translates to: LVSSSGDIVSSTSSF*VFSVSKGISPFITT Trigger: CGTGGTAATGAAAGGTGAGATCCCCTTTGAGACACTAAAGACTCAGAATGATGAAGTGCTGCTTACAATGTCTCCAGATGAGGAGACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS-3UTR CAA 90 bp | CTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACAACTCTGCCTTCATGTCATaGAGGAGAATTCTCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LTHCSQVTRLLKRPEMYNSAFMS*RRILRT Trigger: AGTCCTGAGAATTCTCCTCAATGACATGAAGGCAGA...GTTGTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR CAA 90 bp | TGTCTAACTCATTGCTCACAAGTAACCAGGCTGCTTAAAAGACCAGAAATGTACTCTACCAGGCAGTTCTaGACATTTTCTCCAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CLTHCSQVTRLLKRPEMYSTRQF*TFSPGE Trigger: TTCTCCTGGAGAAAATGTCAAGAACTGCCTGGTAGA...GTACATTTCTGGTCTTTTAAGCAGCCTGGTTACTTGTGAGCAATGAGTTAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
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| CDS CCA 90 bp | CAAACAAGATCGTCACACTTATCAGCTCCCTTTTCAAGAAGCAACTaGACAATTTCCTTCAGTTGTTTATCAACAGCAATTAGCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QTRSSHLSAPFSRSN*TISFSCLSTAISRA Trigger: AGCTCTGCTAATTGCTGTTGATAAACAACTGAAGGAAATTGTCCAGTTGCTTCTTGAAAAGGGAGCTGATAAGTGTGACGATCTTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS-3UTR CAA 90 bp | CTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAAAGCCGGACAGCTTTCTaGGAATCTATTAAGATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLKRPEMYNFPRTLLIGKSRTAF*ESIKMF Trigger: AAACATCTTAATAGATTCCAAGAAAGCTGTCCGGCT...TTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086209.10 |
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| CDS-3UTR CAA 90 bp | CTGCTTAAAAGACCAGAAATGTACAACTTCCCAAGAACTCTGCTGATTGGAAAATTACATTTCCGTACTTaGATGTCAGATTCATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLKRPEMYNFPRTLLIGKLHFRT*MSDSFP Trigger: GGGAAATGAATCTGACATCAAAGTACGGAAATGTAA...TTTTCCAATCAGCAGAGTTCTTGGGAAGTTGTACATTTCTGGTCTTTTAAGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
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| CDS TCA 72 bp | TGGAGGCTTTTCAAGGCTGTCCCCCAACGTGAACTGTaGGGCGACCAGTCTCCAGCAGGAGGGTCGGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: WRLFKAVPQREL*GDQSPAGGSVS Trigger: TGACACCGACCCTCCTGCTGGAGACTGGTCGCCTCACAGTTCACGTTGGGGGACAGCCTTGAAAAGCCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS TCA 72 bp | CATACTGTGGAGGCTTTTCAAGGCTGTCCCCCAACGTaGACTGTGAGGCGACCAGTCTCCAGCAGGAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HTVEAFQGCPPT*TVRRPVSSRRV Trigger: GACCCTCCTGCTGGAGACTGGTCGCCTCACAGTTCACGTTGGGGGACAGCCTTGAAAAGCCTCCACAGTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 72 bp | CCTTCCCGACTCAGGAGCATCTGCACCAAGCCTGTGTaGTTCCTCTCCACTGCTGCGATGAGGGGTGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSRLRSICTKPV*FLSTAAMRGVF Trigger: GAAAACACCCCTCATCGCAGCAGTGGAGAGGAAGCACACAGGCTTGGTGCAGATGCTCCTGAGTCGGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 72 bp | CAGGAGGTTCACAATGTCTACCCTGCCAGCTTGCACTaGGTTGTGCAAAGGTGTCCAGCCCCAGGTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QEVHNVYPASLH*VVQRCPAPGVF Trigger: GAAGACACCTGGGGCTGGACACCTTTGCACAACGCAGTGCAAGCTGGCAGGGTAGACATTGTGAACCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 72 bp | CTAAGCAGGAGGTTCACAATGTCTACCCTGCCAGCTTaGACTGCGTTGTGCAAAGGTGTCCAGCCCCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSRRFTMSTLPA*TALCKGVQPQV Trigger: CACCTGGGGCTGGACACCTTTGCACAACGCAGTGCAAGCTGGCAGGGTAGACATTGTGAACCTCCTGCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CCA 72 bp | CCCTGGTCCCACTGCCTCTGGAACGCTGAGGCGTGGTaGAGGCTGTGGGAAGTGTTTTCTGTATTCTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PWSHCLWNAEAW*RLWEVFSVFCF Trigger: GAAACAGAATACAGAAAACACTTCCCACAGCCTCCACCACGCCTCAGCGTTCCAGAGGCAGTGGGACCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 |
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| CDS CAA 90 bp | CTAAGCAGGAGGTTCACAATGTCTACCCTGCCAGCTTGCACTGCGTaGTGCAAAGGTGTCCAGCCCCAGGTGTCTTCACAGGCATTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSRRFTMSTLPACTA*CKGVQPQVSSQALA Trigger: TGCCAATGCCTGTGAAGACACCTGGGGCTGGACACCTTTGCACAACGCAGTGCAAGCTGGCAGGGTAGACATTGTGAACCTCCTGCTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CAA 90 bp | CAGGTGGCCCTTCTCAGCAGCGCTCATGAGAGCTGTGGCGCCTCCTaGCTTCAATCGCCTTTTGTCCTTCGTTGTCTGTCGTCGCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: QVALLSSAHESCGAS*LQSPFVLRCLSSQI Trigger: AATTTGCGACGACAGACAACGAAGGACAAAAGGCGATTGAAGCAAGGAGGCGCCACAGCTCTCATGAGCGCTGCTGAGAAGGGCCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 72 bp | GAGCATCTGCACCAAGCCTGTGTGCTTCCTCTCCACTaGTGCGATGAGGGGTGTTTTCCCTCTTTCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EHLHQACVLPLH*CDEGCFPSFSS Trigger: AGAGGAGAAAGAGGGAAAACACCCCTCATCGCAGCAGTGGAGAGGAAGCACACAGGCTTGGTGCAGATGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 72 bp | GCATCTATGTTTATGCCTTCCCGACTCAGGAGCATCTaGACCAAGCCTGTGTGCTTCCTCTCCACTGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: ASMFMPSRLRSI*TKPVCFLSTAA Trigger: CGCAGCAGTGGAGAGGAAGCACACAGGCTTGGTGCAGATGCTCCTGAGTCGGGAAGGCATAAACATAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CAA 72 bp | AGGTTCACAATGTCTACCCTGCCAGCTTGCACTGCGTaGTGCAAAGGTGTCCAGCCCCAGGTGTCTTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: RFTMSTLPACTA*CKGVQPQVSSQ Trigger: CTGTGAAGACACCTGGGGCTGGACACCTTTGCACAACGCAGTGCAAGCTGGCAGGGTAGACATTGTGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CAA 72 bp | ACTAAGCAGGAGGTTCACAATGTCTACCCTGCCAGCTaGCACTGCGTTGTGCAAAGGTGTCCAGCCCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TKQEVHNVYPAS*HCVVQRCPAPG Trigger: ACCTGGGGCTGGACACCTTTGCACAACGCAGTGCAAGCTGGCAGGGTAGACATTGTGAACCTCCTGCTTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CAA 72 bp | CTTCTCAGCAGCGCTCATGAGAGCTGTGGCGCCTCCTaGCTTCAATCGCCTTTTGTCCTTCGTTGTCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLSSAHESCGAS*LQSPFVLRCLS Trigger: CGACAGACAACGAAGGACAAAAGGCGATTGAAGCAAGGAGGCGCCACAGCTCTCATGAGCGCTGCTGAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CAA 90 bp | AGCACCATGACTAAGCAGGAGGTTCACAATGTCTACCCTGCCAGCTaGCACTGCGTTGTGCAAAGGTGTCCAGCCCCAGGTGTCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: STMTKQEVHNVYPAS*HCVVQRCPAPGVFT Trigger: TGTGAAGACACCTGGGGCTGGACACCTTTGCACAACGCAGTGCAAGCTGGCAGGGTAGACATTGTGAACCTCCTGCTTAGTCATGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS TCA 72 bp | AGAGAACCAGCCGTCCAAGATCCTCCAAGTCTCTCCTaGCCATCTGTGACTCTCCCATCCATCGGATGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: REPAVQDPPSLS*PSVTLPSIGCS Trigger: AGAGCATCCGATGGATGGGAGAGTCACAGATGGTCAGGAGAGACTTGGAGGATCTTGGACGGCTGGTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 72 bp | TTCTCAGCAGCGCTCATGAGAGCTGTGGCGCCTCCTTaGTTCAATCGCCTTTTGTCCTTCGTTGTCTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: FSAALMRAVAPP*FNRLLSFVVCR Trigger: ACGACAGACAACGAAGGACAAAAGGCGATTGAAGCAAGGAGGCGCCACAGCTCTCATGAGCGCTGCTGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 72 bp | CTGTCTTGCCCTCGTTATCCCTGGCATCTATGTTTATaGCTTCCCGACTCAGGAGCATCTGCACCAAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSCPRYPWHLCL*LPDSGASAPSL Trigger: CAGGCTTGGTGCAGATGCTCCTGAGTCGGGAAGGCATAAACATAGATGCCAGGGATAACGAGGGCAAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CCA 72 bp | GCAGTCCCGCAGACAAGAGACTTCCTTACATCCACGTaGGCTATTCTCACGGAAGACCTTCACAGCCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: AVPQTRDFLTST*AILTEDLHSHF Trigger: GAAGTGGCTGTGAAGGTCTTCCGTGAGAATAGCCCACGTGGATGTAAGGAAGTCTCTTGTCTGCGGGACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CAA 90 bp | TTTCTGCCCATGTTGTCCCGAGCATCGACTTCTGCCTTCATGTCATaGAGGAGAATTCTCAGGACTTCCAGGTGGCCCTTCTCAGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: FLPMLSRASTSAFMS*RRILRTSRWPFSAA Trigger: CGCTGCTGAGAAGGGCCACCTGGAAGTCCTGAGAATTCTCCTCAATGACATGAAGGCAGAAGTCGATGCTCGGGACAACATGGGCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CCA 72 bp | CAAACTTATCTTCCCCGTTCTCCACAGGTTCCTCTCTaGGCAACCTCAGGAACTCTTCCAGTGTCCACTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QTYLPRSPQVPL*ATSGTLPVSTH Trigger: GTGAGTGGACACTGGAAGAGTTCCTGAGGTTGCCCAGAGAGGAACCTGTGGAGAACGGGGAAGATAAGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS TCA 72 bp | CTGACCATCTGTGACTCTCCCATCCATCGGATGCTCTaGTCAAAATCTGCCAGCCGGACAGCTTTCTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LTICDSPIHRML*SKSASRTAFLE Trigger: TTCCAAGAAAGCTGTCCGGCTGGCAGATTTTGATCAGAGCATCCGATGGATGGGAGAGTCACAGATGGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 72 bp | AGCCGTGAATCCGTTCTCGTCACACTCATTGACGTCTaGACCACAAGAGAGGAGAATCTCGAGCAGTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SRESVLVTLIDV*TTREENLEQFH Trigger: GTGAAACTGCTCGAGATTCTCCTCTCTTGTGGTGCAGACGTCAATGAGTGTGACGAGAACGGATTCACGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CAA 72 bp | TTCAGCAGAGTACGGATCAGGGCATTTCTGCCCATGTaGTCCCGAGCATCGACTTCTGCCTTCATGTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: FSRVRIRAFLPM*SRASTSAFMSL Trigger: CAATGACATGAAGGCAGAAGTCGATGCTCGGGACAACATGGGCAGAAATGCCCTGATCCGTACTCTGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CAA 90 bp | TCAGCAGCTTCCATGAAAGCCGTGAATCCGTTCTCGTCACACTCATaGACGTCTGCACCACAAGAGAGGAGAATCTCGAGCAGTTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: SAASMKAVNPFSSHS*TSAPQERRISSSFT Trigger: TGTGAAACTGCTCGAGATTCTCCTCTCTTGTGGTGCAGACGTCAATGAGTGTGACGAGAACGGATTCACGGCTTTCATGGAAGCTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CAA 90 bp | CAATCCCAGTTCAGCAGAGTACGGATCAGGGCATTTCTGCCCATGTaGTCCCGAGCATCGACTTCTGCCTTCATGTCATTGAGGAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: QSQFSRVRIRAFLPM*SRASTSAFMSLRRI Trigger: AATTCTCCTCAATGACATGAAGGCAGAAGTCGATGCTCGGGACAACATGGGCAGAAATGCCCTGATCCGTACTCTGCTGAACTGGGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 72 bp | GGCATTTCTGCCCATGTTGTCCCGAGCATCGACTTCTaGCTTCATGTCATTGAGGAGAATTCTCAGGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: GISAHVVPSIDF*LHVIEENSQDF Trigger: GAAGTCCTGAGAATTCTCCTCAATGACATGAAGGCAGAAGTCGATGCTCGGGACAACATGGGCAGAAATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CCA 72 bp | ATCTTGAGTTTGCCAATCATGGGTCGAGTCATACTGTaGAGGCTTTTCAAGGCTGTCCCCCAACGTGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: ILSLPIMGRVIL*RLFKAVPQREL Trigger: CAGTTCACGTTGGGGGACAGCCTTGAAAAGCCTCCACAGTATGACTCGACCCATGATTGGCAAACTCAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CAA 72 bp | ATGAGAGCTGTGGCGCCTCCTTGCTTCAATCGCCTTTaGTCCTTCGTTGTCTGTCGTCGCAAATTCACATTG | + |
|
Preference number: 6 (lower is better) Translates to: MRAVAPPCFNRL*SFVVCRRKFTL Trigger: CAATGTGAATTTGCGACGACAGACAACGAAGGACAAAAGGCGATTGAAGCAAGGAGGCGCCACAGCTCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS TCA 72 bp | GTCCACTGGTCAAAGCTTCTGGGAGGCTCAAGTGTCTaGTGCTGCAGTAGTCTGAGAAGATCACTTTTACAT | + |
|
Preference number: 6 (lower is better) Translates to: VHWSKLLGGSSV*CCSSLRRSLLH Trigger: ATGTAAAAGTGATCTTCTCAGACTACTGCAGCATCAGACACTTGAGCCTCCCAGAAGCTTTGACCAGTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS TCA 72 bp | CCTCTTTCTCCTCTCACGTTAACATCAGCCCCGTGCTaGATCAGGATTGAAGTAATCTCCTCCACATTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PLSPLTLTSAPC*IRIEVISSTFS Trigger: TGAAAATGTGGAGGAGATTACTTCAATCCTGATTCAGCACGGGGCTGATGTTAACGTGAGAGGAGAAAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS TCA 72 bp | TCTCACGTTAACATCAGCCCCGTGCTGAATCAGGATTaGAGTAATCTCCTCCACATTTTCACAATCCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SHVNISPVLNQD*SNLLHIFTIPV Trigger: AACTGGGATTGTGAAAATGTGGAGGAGATTACTTCAATCCTGATTCAGCACGGGGCTGATGTTAACGTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS TCA 72 bp | TCATCTGGAGACATTGTAAGCAGCACTTCATCATTCTaGGTCTTTAGTGTCTCAAAGGGGATCTCACCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSGDIVSSTSSF*VFSVSKGISPF Trigger: GAAAGGTGAGATCCCCTTTGAGACACTAAAGACTCAGAATGATGAAGTGCTGCTTACAATGTCTCCAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS GCA 72 bp | TCAGTTGTTTATCAACAGCAATTAGCAGAGCTGTCTTaGCCTCGTTATCCCTGGCATCTATGTTTATGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SVVYQQQLAELS*PRYPWHLCLCL Trigger: AAGGCATAAACATAGATGCCAGGGATAACGAGGGCAAGACAGCTCTGCTAATTGCTGTTGATAAACAACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CCA 72 bp | TCGTCACACTTATCAGCTCCCTTTTCAAGAAGCAACTaGACAATTTCCTTCAGTTGTTTATCAACAGCAATT | + |
|
Preference number: 6 (lower is better) Translates to: SSHLSAPFSRSN*TISFSCLSTAI Trigger: AATTGCTGTTGATAAACAACTGAAGGAAATTGTCCAGTTGCTTCTTGAAAAGGGAGCTGATAAGTGTGACGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086209.10 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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| CDS CAA 72 bp | AGTAGTCTGAGAAGATCACTTTTACATTTCCGTACTTaGATGTCAGATTCATTTCCCACATTCCGGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: SSLRRSLLHFRT*MSDSFPTFRSV Trigger: AACACTCCGGAATGTGGGAAATGAATCTGACATCAAAGTACGGAAATGTAAAAGTGATCTTCTCAGACTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086209.10 ENSMUST00000182538.3 ENSMUST00000182722.8 ENSMUST00000183241.8 |
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