Pregenerated sensors for RNASEH2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052926Ensembl transcript IDs: ENSMUST00000065049.15, ENSMUST00000109736.9, ENSMUST00000109738.10, ENSMUST00000128972.9, ENSMUST00000140561.8, ENSMUST00000147812.8
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAGGAGGTGATTTTTCCCGGTCTTTCAGGATCCTCCTCAGCTTCTaGGTCCTCCCTGTGGGAGAGAGGGATGACTGGCCACTTCCCATC | + |
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Preference number: 1 (lower is better) Translates to: VGGDFSRSFRILLSF*VLPVGERDDWPLPI Trigger: GATGGGAAGTGGCCAGTCATCCCTCTCTCCCACAGGGAGGACTCAGAAGCTGAGGAGGATCCTGAAAGACCGGGAAAAATCACCTCCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
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| 3UTR TCA 90 bp | AACAGAGCAGGCCGTAATTTCTCTAAGTCCAGCTCCAGAGAAATCTaGAGCCTACGACCTCCAAGGGCCCTTGCATTTACACGTGCATAC | + |
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Preference number: 1 (lower is better) Translates to: NRAGRNFSKSSSREI*SLRPPRALAFTRAY Trigger: GTATGCACGTGTAAATGCAAGGGCCCTTGGAGGTCGTAGGCTTCAGATTTCTCTGGAGCTGGACTTAGAGAAATTACGGCCTGCTCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR CCA 90 bp | AAAAATAAAAAGGCTATGATAGTGCATGTCTTTAACCTCAGCACTTaGGAGGCAGAGGCAGGTGAGTGCCACAATGTGCCCAAGACCAAC | + |
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Preference number: 1 (lower is better) Translates to: KNKKAMIVHVFNLST*EAEAGECHNVPKTN Trigger: GTTGGTCTTGGGCACATTGTGGCACTCACCTGCCTCTGCCTCCCAAGTGCTGAGGTTAAAGACATGCACTATCATAGCCTTTTTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR TCA 90 bp | TCACAACCATCTATAATGGGATCTGATGCCCTCTTCTGCCGTGTCTaGAGACAGCTACAGTGTACTTACATACATAAATCATTCTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: SQPSIMGSDALFCRV*RQLQCTYIHKSFFK Trigger: TTTAAAGAATGATTTATGTATGTAAGTACACTGTAGCTGTCTTCAGACACGGCAGAAGAGGGCATCAGATCCCATTATAGATGGTTGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTGGCTCCTAGAGGCTGCTaGCTGCCTCCAGGCCTCGCT | + |
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Preference number: 2 (lower is better) Translates to: PGLEGQVVHTWAPRGCWLAPRGC*LPPGLA Trigger: AGCGAGGCCTGGAGGCAGCCAGCAGCCTCTAGGAGC...CAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| 3UTR-3UTR TCA 90 bp | GGGGGCCTGAGGGCGGCAGGTCTGCGGGCCCTGGCTGAAGTAGGAGGTGATTTTTGTGGGAGAGAGGGATaGCTGGCCACTTCCCATCGG | + |
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Preference number: 2 (lower is better) Translates to: GGLRAAGLRALAEVGGDFCGREG*LATSHR Trigger: CCGATGGGAAGTGGCCAGTCATCCCTCTCTCCCACA...AAAATCACCTCCTACTTCAGCCAGGGCCCGCAGACCTGCCGCCCTCAGGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGGCCTGAGGGCGGCAGGTCTGCGGGCCCTGGCTGAAGTAGGAGGTGATTTTTCTGAGTCCTCCCTGTaGGAGAGAGGGATGACTGGC | + |
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Preference number: 2 (lower is better) Translates to: GGLRAAGLRALAEVGGDFSESSL*ERGMTG Trigger: GCCAGTCATCCCTCTCTCCCACAGGGAGGACTCAGA...AAAATCACCTCCTACTTCAGCCAGGGCCCGCAGACCTGCCGCCCTCAGGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
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| 3UTR-3UTR TCA 90 bp | AGGACTGGAAAGATGGCTCCCTGGTTGACAGCAACAATGACTGTTCTTGCAGAGGGAGGCAGAGGCAGGTaGGTGCCACAATGTGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: RTGKMAPWLTATMTVLAEGGRGR*VPQCAQ Trigger: TTGGGCACATTGTGGCACTCACCTGCCTCTGCCTCC...CTCTGCAAGAACAGTCATTGTTGCTGTCAACCAGGGAGCCATCTTTCCAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCTCAAAAACACCTCCAACTCCAGTTGCAGGGGATCTGGTGCCCTCTTCTTGCCCAAGACCAACCTaGTCTACACAGTTCCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: GGSKTPPTPVAGDLVPSSCPRPT*STQFQH Trigger: ATGCTGGAACTGTGTAGACCAGGTTGGTCTTGGGCA...AGAAGAGGGCACCAGATCCCCTGCAACTGGAGTTGGAGGTGTTTTTGAGCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR TCA 90 bp | TCTGCAGCTGTGTCTCAGGCCTGTCTGGTCTACGTAGCAAGTTCCAGGACAGTCATCTATAATGGGATCTaGTGCCCTCTTCTGCCGTGT | + |
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Preference number: 2 (lower is better) Translates to: SAAVSQACLVYVASSRTVIYNGI*CPLLPC Trigger: ACACGGCAGAAGAGGGCATCAGATCCCATTATAGAT...GACTGTCCTGGAACTTGCTACGTAGACCAGACAGGCCTGAGACACAGCTGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR CAA 90 bp | AAGGAAGAGGAGAGGAGGCAGAGGACTGGAAAGATGGCTCCCTGGTaGACAGCAACAATGACTGTTCTTGCAGAGGACCTGATTCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: KEEERRQRTGKMAPW*TATMTVLAEDLILK Trigger: CTTGAGAATCAGGTCCTCTGCAAGAACAGTCATTGTTGCTGTCAACCAGGGAGCCATCTTTCCAGTCCTCTGCCTCCTCTCCTCTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR CCA 90 bp | GTCTGCAGCTGTGTCTCAGGCCTGTCTGGTCTACGTAGCAAGTTCCAGGACAGTAACAGCTTTTATTCCTaGGTTAGAAGGGCAGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: VCSCVSGLSGLRSKFQDSNSFYS*VRRAGG Trigger: ACCACCTGCCCTTCTAACCCAGGAATAAAAGCTGTT...ACTGTCCTGGAACTTGCTACGTAGACCAGACAGGCCTGAGACACAGCTGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR GCA 90 bp | GTCTGCAGCTGTGTCTCAGGCCTGTCTGGTCTACGTAGCAAGTTCCAGGACAGTCACCAAAGAAAAATATaGGGGATGGAGAAAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: VCSCVSGLSGLRSKFQDSHQRKI*GMEKAS Trigger: ACTGGCTTTCTCCATCCCGCATATTTTTCTTTGGTG...ACTGTCCTGGAACTTGCTACGTAGACCAGACAGGCCTGAGACACAGCTGCAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR CCA 90 bp | ATCTACCTACCTGTCCTCCAAATGCTGGGATTAAAGGTATGCAATACCACAACAGAGGAGGCAGAGGACTaGAAAGATGGCTCCCTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: IYLPVLQMLGLKVCNTTTEEAED*KDGSLV Trigger: AACCAGGGAGCCATCTTTCCAGTCCTCTGCCTCCTC...TGTTGTGGTATTGCATACCTTTAATCCCAGCATTTGGAGGACAGGTAGGTAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR GCA 90 bp | ATCTACCTACCTGTCCTCCAAATGCTGGGATTAAAGGTATGCAATACCACAACAGTGAGTGCCACAATGTaGCCAAGACCAACCTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: IYLPVLQMLGLKVCNTTTVSATM*PRPTWS Trigger: AGACCAGGTTGGTCTTGGGCACATTGTGGCACTCAC...TGTTGTGGTATTGCATACCTTTAATCCCAGCATTTGGAGGACAGGTAGGTAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR CAA 90 bp | GATCTGGTGCCCTCTTCTGGCTTCTTTGAGAACTGCATGGATGTGTaGCACAAATATACATACAACTCCTTTAATTCCAAGTCTGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DLVPSSGFFENCMDV*HKYTYNSFNSKSAA Trigger: AGCTGCAGACTTGGAATTAAAGGAGTTGTATGTATATTTGTGCAACACATCCATGCAGTTCTCAAAGAAGCCAGAAGAGGGCACCAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR GCA 90 bp | TTGAGAACTGCATGGATGTGTTGCACAAATATACATACAACTCCTTTAATTCCAGTGAGTGCCACAATGTaGCCAAGACCAACCTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LRTAWMCCTNIHTTPLIPVSATM*PRPTWS Trigger: AGACCAGGTTGGTCTTGGGCACATTGTGGCACTCAC...TGGAATTAAAGGAGTTGTATGTATATTTGTGCAACACATCCATGCAGTTCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR CCA 90 bp | AGAACTGCATGGATGTGTTGCACAAATATACATACAACTCCTTTAATTCCAAGTTTTAACCTCAGCACTTaGGAGGCAGAGGCAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: RTAWMCCTNIHTTPLIPSFNLST*EAEAGE Trigger: CTCACCTGCCTCTGCCTCCCAAGTGCTGAGGTTAAA...ACTTGGAATTAAAGGAGTTGTATGTATATTTGTGCAACACATCCATGCAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR CCA 90 bp | ATCTACCTACCTGTCCTCCAAATGCTGGGATTAAAGGTATGCAATACCACAACAGATGGAGAAAGCCAGTaGTCAAAAGCACATAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: IYLPVLQMLGLKVCNTTTDGESQ*SKAHSS Trigger: TGAACTATGTGCTTTTGACCACTGGCTTTCTCCATC...TGTTGTGGTATTGCATACCTTTAATCCCAGCATTTGGAGGACAGGTAGGTAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR GCA 90 bp | ATCTACCTACCTGTCCTCCAAATGCTGGGATTAAAGGTATGCAATACCACAACAACTGCATGGATGTGTTaGACAAATATACATACAACT | + |
|
Preference number: 2 (lower is better) Translates to: IYLPVLQMLGLKVCNTTTTAWMC*TNIHTT Trigger: AGTTGTATGTATATTTGTGCAACACATCCATGCAGT...TGTTGTGGTATTGCATACCTTTAATCCCAGCATTTGGAGGACAGGTAGGTAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR GCA 72 bp | AGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTaGCTCCAGGCCTCGCTCCTGGAAGTATCTGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: RWCTRGLLEAAG*LQASLLEVSVG Trigger: CCCCACAGATACTTCCAGGAGCGAGGCCTGGAGGCAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| 3UTR CCA 72 bp | GGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTaGCTGCCTCCAGGCCTCGCTCCTGGAAGTATCTGT | + |
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Preference number: 3 (lower is better) Translates to: GQVVHTWAPRGC*LPPGLAPGSIC Trigger: ACAGATACTTCCAGGAGCGAGGCCTGGAGGCAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| 3UTR TCA 72 bp | GATTTTTCCCGGTCTTTCAGGATCCTCCTCAGCTTCTaGGTCCTCCCTGTGGGAGAGAGGGATGACTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: DFSRSFRILLSF*VLPVGERDDWP Trigger: TGGCCAGTCATCCCTCTCTCCCACAGGGAGGACTCAGAAGCTGAGGAGGATCCTGAAAGACCGGGAAAAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
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| 3UTR CCA 72 bp | GAGGAGAGGAGGCAGAGGACTGGAAAGATGGCTCCCTaGTTGACAGCAACAATGACTGTTCTTGCAGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: EERRQRTGKMAP*LTATMTVLAED Trigger: GTCCTCTGCAAGAACAGTCATTGTTGCTGTCAACCAGGGAGCCATCTTTCCAGTCCTCTGCCTCCTCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR GCA 72 bp | CAAAAACACCTCCAACTCCAGTTGCAGGGGATCTGGTaGCCTCTTCTGGCTTCTTTGAGAACTGCATGGATG | + |
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Preference number: 3 (lower is better) Translates to: QKHLQLQLQGIW*PLLASLRTAWM Trigger: CATCCATGCAGTTCTCAAAGAAGCCAGAAGAGGGCACCAGATCCCCTGCAACTGGAGTTGGAGGTGTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR TCA 72 bp | GGCCGTAATTTCTCTAAGTCCAGCTCCAGAGAAATCTaGAGCCTACGACCTCCAAGGGCCCTTGCATTTACA | + |
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Preference number: 3 (lower is better) Translates to: GRNFSKSSSREI*SLRPPRALAFT Trigger: TGTAAATGCAAGGGCCCTTGGAGGTCGTAGGCTTCAGATTTCTCTGGAGCTGGACTTAGAGAAATTACGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR CAA 90 bp | AGGACTGGAAAGATGGCTCCCTGGTTGACAGCAACAATGACTGTTCTTGCAGAGAAATGCCTATTTTGTTaGATGAATCAGCTGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: RTGKMAPWLTATMTVLAEKCLFC*MNQLLA Trigger: GGCCAGCAGCTGATTCATCAAACAAAATAGGCATTT...CTCTGCAAGAACAGTCATTGTTGCTGTCAACCAGGGAGCCATCTTTCCAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR CAA 90 bp | ATCTACCTACCTGTCCTCCAAATGCTGGGATTAAAGGTATGCAATACCACAACAGACCTCCAAGGGCCCTaGCATTTACACGTGCATACT | + |
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Preference number: 3 (lower is better) Translates to: IYLPVLQMLGLKVCNTTTDLQGP*HLHVHT Trigger: AGTATGCACGTGTAAATGCAAGGGCCCTTGGAGGTC...TGTTGTGGTATTGCATACCTTTAATCCCAGCATTTGGAGGACAGGTAGGTAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR GCA 72 bp | TACCTACCTGTCCTCCAAATGCTGGGATTAAAGGTATaGAATACCACAACAGCGCATGCACGCAAACACACA | + |
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Preference number: 3 (lower is better) Translates to: YLPVLQMLGLKV*NTTTAHARKHT Trigger: TGTGTGTTTGCGTGCATGCGCTGTTGTGGTATTGCATACCTTTAATCCCAGCATTTGGAGGACAGGTAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR CCA 72 bp | GCACCAAAGAAAAATATGCGGGATGGAGAAAGCCAGTaGTCAAAAGCACATAGTTCAGATCAGCACCAACAG | + |
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Preference number: 3 (lower is better) Translates to: APKKNMRDGESQ*SKAHSSDQHQQ Trigger: CTGTTGGTGCTGATCTGAACTATGTGCTTTTGACCACTGGCTTTCTCCATCCCGCATATTTTTCTTTGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR CAA 90 bp | TCTTCTGCCGTGTCTGAAGACAGCTACAGTGTACTTACATACATAAATCATTCTCACTCGGTCCACTTCTaGAACAGCTTTTATTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: SSAVSEDSYSVLTYINHSHSVHF*NSFYSW Trigger: CCAGGAATAAAAGCTGTTCAAGAAGTGGACCGAGTG...AGAATGATTTATGTATGTAAGTACACTGTAGCTGTCTTCAGACACGGCAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| 3UTR-3UTR CAA 90 bp | TCTTCTGCCGTGTCTGAAGACAGCTACAGTGTACTTACATACATAAATCATTCTAAATGCCTATTTTGTTaGATGAATCAGCTGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: SSAVSEDSYSVLTYINHSKCLFC*MNQLLA Trigger: GGCCAGCAGCTGATTCATCAAACAAAATAGGCATTT...AGAATGATTTATGTATGTAAGTACACTGTAGCTGTCTTCAGACACGGCAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
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| CDS-3UTR GCA 90 bp | CCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTGCAGGGCCTCCAGATCTaGCAAGCGAGACAGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: PGLEGQVVHTWAPRGCWLQGLQI*QARQGA Trigger: TGCCCCCTGTCTCGCTTGGCAGATCTGGAGGCCCTG...CAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| CDS-3UTR TCA 90 bp | GGGGGCCTGAGGGCGGCAGGTCTGCGGGCCCTGGCTGAAGTAGGAGGTGATTTTGAACGCACGGCTCCTTaGGACACACAGCAGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: GGLRAAGLRALAEVGGDFERTAP*DTQQVQ Trigger: CTGTACCTGCTGTGTGTCTCAAGGAGCCGTGCGTTC...AAAATCACCTCCTACTTCAGCCAGGGCCCGCAGACCTGCCGCCCTCAGGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| CDS-3UTR CCA 90 bp | GGGGGCCTGAGGGCGGCAGGTCTGCGGGCCCTGGCTGAAGTAGGAGGTGATTTTTGTCTCGGGCCACCTTaGCAAAGATGCTGGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: GGLRAAGLRALAEVGGDFCLGPP*QRCWQH Trigger: GTGCTGCCAGCATCTTTGCCAAGGTGGCCCGAGACA...AAAATCACCTCCTACTTCAGCCAGGGCCCGCAGACCTGCCGCCCTCAGGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| CDS-3UTR TCA 90 bp | GGGGGCCTGAGGGCGGCAGGTCTGCGGGCCCTGGCTGAAGTAGGAGGTGATTTTGGGCTGTGCTCCAACTaGACCGTACAAACTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: GGLRAAGLRALAEVGGDFGLCSN*TVQTGE Trigger: TTCCCCAGTTTGTACGGTTCAGTTGGAGCACAGCCC...AAAATCACCTCCTACTTCAGCCAGGGCCCGCAGACCTGCCGCCCTCAGGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| CDS-3UTR CCA 90 bp | CCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTGAGATGGCGTAGACCATaGGACCAAGCACAGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PGLEGQVVHTWAPRGCWLRWRRP*DQAQGL Trigger: GAGGCCCTGTGCTTGGTCCCATGGTCTACGCCATCT...CAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| CDS-3UTR CCA 90 bp | GGGGGCCTGAGGGCGGCAGGTCTGCGGGCCCTGGCTGAAGTAGGAGGTGATTTTGGGGGCAGTAACAGATaGCGTAGACCATGGGACCAA | + |
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Preference number: 4 (lower is better) Translates to: GGLRAAGLRALAEVGGDFGGSNR*RRPWDQ Trigger: TTGGTCCCATGGTCTACGCCATCTGTTACTGCCCCC...AAAATCACCTCCTACTTCAGCCAGGGCCCGCAGACCTGCCGCCCTCAGGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| CDS-3UTR CCA 90 bp | GGGGGCCTGAGGGCGGCAGGTCTGCGGGCCCTGGCTGAAGTAGGAGGTGATTTTTTCTCCAGGATGGCCTaGGCTGTGCTCCAACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GGLRAAGLRALAEVGGDFFSRMA*AVLQLN Trigger: GTTCAGTTGGAGCACAGCCCAGGCCATCCTGGAGAA...AAAATCACCTCCTACTTCAGCCAGGGCCCGCAGACCTGCCGCCCTCAGGCCCCC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| CDS-3UTR TCA 90 bp | CCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTGAGTCAGCTTTGGCCTTaGCTGTCACCTCTATCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PGLEGQVVHTWAPRGCWLSQLWP*LSPLSR Trigger: CCGGGATAGAGGTGACAGTCAAGGCCAAAGCTGACT...CAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| CDS-3UTR CCA 90 bp | CCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTGTTCTCCAGGATGGCCTaGGCTGTGCTCCAACTGAAC | + |
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Preference number: 4 (lower is better) Translates to: PGLEGQVVHTWAPRGCWLFSRMA*AVLQLN Trigger: GTTCAGTTGGAGCACAGCCCAGGCCATCCTGGAGAA...CAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| CDS-3UTR CCA 90 bp | GGGGGCCTGAGGGCGGCAGGTCTGCGGGCCCTGGCTGAAGTAGGAGGTGATTTTCTGAACCGTACAAACTaGGGAAAGCCAAACACAGGG | + |
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Preference number: 4 (lower is better) Translates to: GGLRAAGLRALAEVGGDFLNRTN*GKPNTG Trigger: CCCTGTGTTTGGCTTTCCCCAGTTTGTACGGTTCAG...AAAATCACCTCCTACTTCAGCCAGGGCCCGCAGACCTGCCGCCCTCAGGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| CDS-3UTR TCA 90 bp | TCAGCTTCTGAGTCCTCCCTGTGGGAGAGAGGGATGACTGGCCACTTCCCATCGGAACGCACGGCTCCTTaGGACACACAGCAGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: SASESSLWERGMTGHFPSERTAP*DTQQVQ Trigger: CTGTACCTGCTGTGTGTCTCAAGGAGCCGTGCGTTC...CGATGGGAAGTGGCCAGTCATCCCTCTCTCCCACAGGGAGGACTCAGAAGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
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| CDS-3UTR TCA 90 bp | ATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGAGTCAGCTTTGGCCTTaGCTGTCACCTCTATCCCGG | + |
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Preference number: 4 (lower is better) Translates to: IPGLEGQVVHTWAPRGCWSQLWP*LSPLSR Trigger: CCGGGATAGAGGTGACAGTCAAGGCCAAAGCTGACT...CCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
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| CDS-3UTR TCA 90 bp | TCCTCCTCAGCTTCTGAGTCCTCCCTGTGGGAGAGAGGGATGACTGGCCACTTCAGATGCTGGCAGCACTaGCCACAGGGAACAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSASESSLWERGMTGHFRCWQH*PQGTGS Trigger: ACTCCCTGTTCCCTGTGGTCAGTGCTGCCAGCATCT...GAAGTGGCCAGTCATCCCTCTCTCCCACAGGGAGGACTCAGAAGCTGAGGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
||
| CDS-3UTR TCA 90 bp | GGATCCTCCTCAGCTTCTGAGTCCTCCCTGTGGGAGAGAGGGATGACTGGCCACGGGCTGTGCTCCAACTaGACCGTACAAACTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSSSASESSLWERGMTGHGLCSN*TVQTGE Trigger: TTCCCCAGTTTGTACGGTTCAGTTGGAGCACAGCCC...GTGGCCAGTCATCCCTCTCTCCCACAGGGAGGACTCAGAAGCTGAGGAGGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
||
| CDS-3UTR GCA 90 bp | GTCTGCAGCTGTGTCTCAGGCCTGTCTGGTCTACGTAGCAAGTTCCAGGACAGTCAGGGCCTCCAGATCTaGCAAGCGAGACAGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCSCVSGLSGLRSKFQDSQGLQI*QARQGA Trigger: TGCCCCCTGTCTCGCTTGGCAGATCTGGAGGCCCTG...ACTGTCCTGGAACTTGCTACGTAGACCAGACAGGCCTGAGACACAGCTGCAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTGTCCTCAGCCAGGCTTTaGTCTTGGGATCATTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGLEGQVVHTWAPRGCWLSSARL*SWDHWD Trigger: ATCCCAATGATCCCAAGACCAAAGCCTGGCTGAGGA...CAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR GCA 90 bp | TTGAACAGCTTTTATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCCAGGGCCTCCAGATCTaGCAAGCGAGACAGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNSFYSWVRRAGGAHVGSQGLQI*QARQGA Trigger: TGCCCCCTGTCTCGCTTGGCAGATCTGGAGGCCCTG...GGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAATAAAAGCTGTTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGCCTGAGGGCGGCAGGTCTGCGGGCCCTGGCTGAAGTAGGAGGTGATTTTTGTTGTAATCGAGCCTaGTATGTCTCTGGCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGLRAAGLRALAEVGGDFCCNRA*YVSGIP Trigger: AGGAATGCCAGAGACATACCAGGCTCGATTACAACA...AAAATCACCTCCTACTTCAGCCAGGGCCCGCAGACCTGCCGCCCTCAGGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGCCTGAGGGCGGCAGGTCTGCGGGCCCTGGCTGAAGTAGGAGGTGATTTTTGGTCTTGGGATCATTaGGATAGCCTGAGCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGLRAAGLRALAEVGGDFWSWDH*DSLSHN Trigger: ATTATGGCTCAGGCTATCCCAATGATCCCAAGACCA...AAAATCACCTCCTACTTCAGCCAGGGCCCGCAGACCTGCCGCCCTCAGGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCACTTCCCATCGGGCTGAGTGAACGCATGGCCTCCCTTCCCCTGGTCTGTCTGAACCGTACAAACTaGGGAAAGCCAAACACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WPLPIGLSERMASLPLVCLNRTN*GKPNTG Trigger: CCCTGTGTTTGGCTTTCCCCAGTTTGTACGGTTCAG...ACAGACCAGGGGAAGGGAGGCCATGCGTTCACTCAGCCCGATGGGAAGTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGGAGGCAGAGGCAGGTGAGTGCCACAATGTGCCCAAGACCAACCTGGTCTTTCTCCAGGATGGCCTaGGCTGTGCTCCAACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGRQRQVSATMCPRPTWSFSRMA*AVLQLN Trigger: GTTCAGTTGGAGCACAGCCCAGGCCATCCTGGAGAA...AGACCAGGTTGGTCTTGGGCACATTGTGGCACTCACCTGCCTCTGCCTCCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR TCA 90 bp | CCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTGCCACAAATACCTGAGTaGCATTCACATTCTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLEGQVVHTWAPRGCWLPQIPE*HSHSGP Trigger: TGGACCAGAATGTGAATGTCACTCAGGTATTTGTGG...CAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTGGTGTCCACAAATACCTaGGTGACATTCACATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLEGQVVHTWAPRGCWLVSTNT*VTFTFW Trigger: CCAGAATGTGAATGTCACTCAGGTATTTGTGGACAC...CAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR TCA 90 bp | TCTGCAGCTGTGTCTCAGGCCTGTCTGGTCTACGTAGCAAGTTCCAGGACAGTCAGATGCTGGCAGCACTaGCCACAGGGAACAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAAVSQACLVYVASSRTVRCWQH*PQGTGS Trigger: ACTCCCTGTTCCCTGTGGTCAGTGCTGCCAGCATCT...GACTGTCCTGGAACTTGCTACGTAGACCAGACAGGCCTGAGACACAGCTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGCTGTGTCTCAGGCCTGTCTGGTCTACGTAGCAAGTTCCAGGACAGTCAGATGGCGTAGACCATaGGACCAAGCACAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SAAVSQACLVYVASSRTVRWRRP*DQAQGL Trigger: GAGGCCCTGTGCTTGGTCCCATGGTCTACGCCATCT...GACTGTCCTGGAACTTGCTACGTAGACCAGACAGGCCTGAGACACAGCTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | ATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGGGTAGAGATCAGGTTTaGAGACAGGACGTCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPGLEGQVVHTWAPRGCWGRDQV*RQDVQS Trigger: GCTTTGGACGTCCTGTCTCCAAACCTGATCTCTACC...CCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR CCA 90 bp | GTCTGCAGCTGTGTCTCAGGCCTGTCTGGTCTACGTAGCAAGTTCCAGGACAGTTGTCTCGGGCCACCTTaGCAAAGATGCTGGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCSCVSGLSGLRSKFQDSCLGPP*QRCWQH Trigger: GTGCTGCCAGCATCTTTGCCAAGGTGGCCCGAGACA...ACTGTCCTGGAACTTGCTACGTAGACCAGACAGGCCTGAGACACAGCTGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | ATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGTCCTCAGCCAGGCTTTaGTCTTGGGATCATTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPGLEGQVVHTWAPRGCWSSARL*SWDHWD Trigger: ATCCCAATGATCCCAAGACCAAAGCCTGGCTGAGGA...CCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR TCA 90 bp | TTGAACAGCTTTTATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCAGATGCTGGCAGCACTaGCCACAGGGAACAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNSFYSWVRRAGGAHVGSRCWQH*PQGTGS Trigger: ACTCCCTGTTCCCTGTGGTCAGTGCTGCCAGCATCT...GGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAATAAAAGCTGTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR TCA 90 bp | GGTGGCTCAAAAACACCTCCAACTCCAGTTGCAGGGGATCTGGTGCCCTCTTCTGGGCTGTGCTCCAACTaGACCGTACAAACTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGSKTPPTPVAGDLVPSSGLCSN*TVQTGE Trigger: TTCCCCAGTTTGTACGGTTCAGTTGGAGCACAGCCC...AGAAGAGGGCACCAGATCCCCTGCAACTGGAGTTGGAGGTGTTTTTGAGCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR GCA 90 bp | AGGACTGGAAAGATGGCTCCCTGGTTGACAGCAACAATGACTGTTCTTGCAGAGCAGGGCCTCCAGATCTaGCAAGCGAGACAGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTGKMAPWLTATMTVLAEQGLQI*QARQGA Trigger: TGCCCCCTGTCTCGCTTGGCAGATCTGGAGGCCCTG...CTCTGCAAGAACAGTCATTGTTGCTGTCAACCAGGGAGCCATCTTTCCAGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTCAAAAACACCTCCAACTCCAGTTGCAGGGGATCTGGTGCCCTCTTCTGGGGGCAGTAACAGATaGCGTAGACCATGGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGSKTPPTPVAGDLVPSSGGSNR*RRPWDQ Trigger: TTGGTCCCATGGTCTACGCCATCTGTTACTGCCCCC...AGAAGAGGGCACCAGATCCCCTGCAACTGGAGTTGGAGGTGTTTTTGAGCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | TTGAACAGCTTTTATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTGTCTCGGGCCACCTTaGCAAAGATGCTGGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNSFYSWVRRAGGAHVGSCLGPP*QRCWQH Trigger: GTGCTGCCAGCATCTTTGCCAAGGTGGCCCGAGACA...GGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAATAAAAGCTGTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR TCA 90 bp | GGATCCTCCTCAGCTTCTGAGTCCTCCCTGTGGGAGAGAGGGATGACTGGCCACGTGTCCACAAATACCTaGGTGACATTCACATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSSASESSLWERGMTGHVSTNT*VTFTFW Trigger: CCAGAATGTGAATGTCACTCAGGTATTTGTGGACAC...GTGGCCAGTCATCCCTCTCTCCCACAGGGAGGACTCAGAAGCTGAGGAGGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
||
| CDS-3UTR GCA 90 bp | ACAAAGCACTCGGTCCACTTCTTGAACAGCTTTTATTCCTGGGTTAGAAGGGCACTAGAGGCTGCTGGCTaGCTCCAGGCCTCGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKHSVHFLNSFYSWVRRALEAAG*LQASLL Trigger: CAGGAGCGAGGCCTGGAGGCAGCCAGCAGCCTCTAG...TGCCCTTCTAACCCAGGAATAAAAGCTGTTCAAGAAGTGGACCGAGTGCTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | ATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGTGTTGTAATCGAGCCTaGTATGTCTCTGGCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IPGLEGQVVHTWAPRGCWCCNRA*YVSGIP Trigger: AGGAATGCCAGAGACATACCAGGCTCGATTACAACA...CCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| 3UTR CAA 72 bp | GAGAGGAGGCAGAGGACTGGAAAGATGGCTCCCTGGTaGACAGCAACAATGACTGTTCTTGCAGAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERRQRTGKMAPW*TATMTVLAEDL Trigger: CAGGTCCTCTGCAAGAACAGTCATTGTTGCTGTCAACCAGGGAGCCATCTTTCCAGTCCTCTGCCTCCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | CTTGGGAGGCAGAGGCAGGTGAGTGCCACAATGTGCCCAAGACCAACCTGGTCTTGGTCTTGGGATCATTaGGATAGCCTGAGCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGRQRQVSATMCPRPTWSWSWDH*DSLSHN Trigger: ATTATGGCTCAGGCTATCCCAATGATCCCAAGACCA...AGACCAGGTTGGTCTTGGGCACATTGTGGCACTCACCTGCCTCTGCCTCCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTCAAAAACACCTCCAACTCCAGTTGCAGGGGATCTGGTGCCCTCTTCTTCCTCAGCCAGGCTTTaGTCTTGGGATCATTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGSKTPPTPVAGDLVPSSSSARL*SWDHWD Trigger: ATCCCAATGATCCCAAGACCAAAGCCTGGCTGAGGA...AGAAGAGGGCACCAGATCCCCTGCAACTGGAGTTGGAGGTGTTTTTGAGCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR TCA 90 bp | CACTCGGTCCACTTCTTGAACAGCTTTTATTCCTGGGTTAGAAGGGCAGGTGGTAGTCAGCTTTGGCCTTaGCTGTCACCTCTATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HSVHFLNSFYSWVRRAGGSQLWP*LSPLSR Trigger: CCGGGATAGAGGTGACAGTCAAGGCCAAAGCTGACT...ACCACCTGCCCTTCTAACCCAGGAATAAAAGCTGTTCAAGAAGTGGACCGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR GCA 90 bp | ATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGAAATTTTCCACAAACTaGCAGTTCTTCACAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPGLEGQVVHTWAPRGCWKFSTN*QFFTAL Trigger: CAAGGCTGTGAAGAACTGGCAGTTTGTGGAAAATTT...CCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR CCA 90 bp | TTGAACAGCTTTTATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCGGTAGAGATCAGGTTTaGAGACAGGACGTCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNSFYSWVRRAGGAHVGSGRDQV*RQDVQS Trigger: GCTTTGGACGTCCTGTCTCCAAACCTGATCTCTACC...GGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAATAAAAGCTGTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR TCA 90 bp | GGTGGCTCAAAAACACCTCCAACTCCAGTTGCAGGGGATCTGGTGCCCTCTTCTGTGTCCACAAATACCTaGGTGACATTCACATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSKTPPTPVAGDLVPSSVSTNT*VTFTFW Trigger: CCAGAATGTGAATGTCACTCAGGTATTTGTGGACAC...AGAAGAGGGCACCAGATCCCCTGCAACTGGAGTTGGAGGTGTTTTTGAGCCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| 3UTR CAA 72 bp | GTGCCCAAGACCAACCTGGTCTACACAGTTCCAGCATaGAGCTATCCAGTGATACCACATGGTGGCTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VPKTNLVYTVPA*SYPVIPHGGSQ Trigger: TTGTGAGCCACCATGTGGTATCACTGGATAGCTCAATGCTGGAACTGTGTAGACCAGGTTGGTCTTGGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | CACTCGGTCCACTTCTTGAACAGCTTTTATTCCTGGGTTAGAAGGGCAGGTGGTGGTAGAGATCAGGTTTaGAGACAGGACGTCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSVHFLNSFYSWVRRAGGGRDQV*RQDVQS Trigger: GCTTTGGACGTCCTGTCTCCAAACCTGATCTCTACC...ACCACCTGCCCTTCTAACCCAGGAATAAAAGCTGTTCAAGAAGTGGACCGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | TTGAACAGCTTTTATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTGGTCTTGGGATCATTaGGATAGCCTGAGCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNSFYSWVRRAGGAHVGSWSWDH*DSLSHN Trigger: ATTATGGCTCAGGCTATCCCAATGATCCCAAGACCA...GGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAATAAAAGCTGTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR TCA 90 bp | AACGTCACCAATCTAGAAATGCCTATTTTGTTTGATGAATCAGCTGCTGGCCACAGATGCTGGCAGCACTaGCCACAGGGAACAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NVTNLEMPILFDESAAGHRCWQH*PQGTGS Trigger: ACTCCCTGTTCCCTGTGGTCAGTGCTGCCAGCATCT...GTGGCCAGCAGCTGATTCATCAAACAAAATAGGCATTTCTAGATTGGTGACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | AACGTCACCAATCTAGAAATGCCTATTTTGTTTGATGAATCAGCTGCTGGCCACAGATGGCGTAGACCATaGGACCAAGCACAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NVTNLEMPILFDESAAGHRWRRP*DQAQGL Trigger: GAGGCCCTGTGCTTGGTCCCATGGTCTACGCCATCT...GTGGCCAGCAGCTGATTCATCAAACAAAATAGGCATTTCTAGATTGGTGACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR TCA 90 bp | ATCTACCTACCTGTCCTCCAAATGCTGGGATTAAAGGTATGCAATACCACAACAGGGCTGTGCTCCAACTaGACCGTACAAACTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IYLPVLQMLGLKVCNTTTGLCSN*TVQTGE Trigger: TTCCCCAGTTTGTACGGTTCAGTTGGAGCACAGCCC...TGTTGTGGTATTGCATACCTTTAATCCCAGCATTTGGAGGACAGGTAGGTAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR GCA 90 bp | AGAACTGCATGGATGTGTTGCACAAATATACATACAACTCCTTTAATTCCAAGTCTAGAGGCTGCTGGCTaGCTCCAGGCCTCGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTAWMCCTNIHTTPLIPSLEAAG*LQASLL Trigger: CAGGAGCGAGGCCTGGAGGCAGCCAGCAGCCTCTAG...ACTTGGAATTAAAGGAGTTGTATGTATATTTGTGCAACACATCCATGCAGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | CACTCGGTCCACTTCTTGAACAGCTTTTATTCCTGGGTTAGAAGGGCAGGTGGTTGTTGTAATCGAGCCTaGTATGTCTCTGGCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSVHFLNSFYSWVRRAGGCCNRA*YVSGIP Trigger: AGGAATGCCAGAGACATACCAGGCTCGATTACAACA...ACCACCTGCCCTTCTAACCCAGGAATAAAAGCTGTTCAAGAAGTGGACCGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | AACGTCACCAATCTAGAAATGCCTATTTTGTTTGATGAATCAGCTGCTGGCCACTTCTCCAGGATGGCCTaGGCTGTGCTCCAACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NVTNLEMPILFDESAAGHFSRMA*AVLQLN Trigger: GTTCAGTTGGAGCACAGCCCAGGCCATCCTGGAGAA...GTGGCCAGCAGCTGATTCATCAAACAAAATAGGCATTTCTAGATTGGTGACGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGCCGTGTCTGAAGACAGCTACAGTGTACTTACATACATAAATCATTCTTGTCTCGGGCCACCTTaGCAAAGATGCTGGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSAVSEDSYSVLTYINHSCLGPP*QRCWQH Trigger: GTGCTGCCAGCATCTTTGCCAAGGTGGCCCGAGACA...AGAATGATTTATGTATGTAAGTACACTGTAGCTGTCTTCAGACACGGCAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | ATCTACCTACCTGTCCTCCAAATGCTGGGATTAAAGGTATGCAATACCACAACAGGTAGAGATCAGGTTTaGAGACAGGACGTCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IYLPVLQMLGLKVCNTTTGRDQV*RQDVQS Trigger: GCTTTGGACGTCCTGTCTCCAAACCTGATCTCTACC...TGTTGTGGTATTGCATACCTTTAATCCCAGCATTTGGAGGACAGGTAGGTAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR TCA 90 bp | AGAACTGCATGGATGTGTTGCACAAATATACATACAACTCCTTTAATTCCAAGTGAACGCACGGCTCCTTaGGACACACAGCAGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RTAWMCCTNIHTTPLIPSERTAP*DTQQVQ Trigger: CTGTACCTGCTGTGTGTCTCAAGGAGCCGTGCGTTC...ACTTGGAATTAAAGGAGTTGTATGTATATTTGTGCAACACATCCATGCAGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR TCA 90 bp | TTGAGAACTGCATGGATGTGTTGCACAAATATACATACAACTCCTTTAATTCCAGAACGCACGGCTCCTTaGGACACACAGCAGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LRTAWMCCTNIHTTPLIPERTAP*DTQQVQ Trigger: CTGTACCTGCTGTGTGTCTCAAGGAGCCGTGCGTTC...TGGAATTAAAGGAGTTGTATGTATATTTGTGCAACACATCCATGCAGTTCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGCCGTGTCTGAAGACAGCTACAGTGTACTTACATACATAAATCATTCTCTGAGTCCTCCCAAATaGCATCTTCTGCCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSAVSEDSYSVLTYINHSLSPPK*HLLPPS Trigger: AGAAGGAGGCAGAAGATGTCATTTGGGAGGACTCAG...AGAATGATTTATGTATGTAAGTACACTGTAGCTGTCTTCAGACACGGCAGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR TCA 90 bp | AGAACTGCATGGATGTGTTGCACAAATATACATACAACTCCTTTAATTCCAAGTCTGAGTCCTCCCAAATaGCATCTTCTGCCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTAWMCCTNIHTTPLIPSLSPPK*HLLPPS Trigger: AGAAGGAGGCAGAAGATGTCATTTGGGAGGACTCAG...ACTTGGAATTAAAGGAGTTGTATGTATATTTGTGCAACACATCCATGCAGTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR TCA 90 bp | AGAACTGCATGGATGTGTTGCACAAATATACATACAACTCCTTTAATTCCAAGTATCCTCCTCAGCTTCTaGGTCCTCCCAAATGACATC | + |
|
Preference number: 4 (lower is better) Translates to: RTAWMCCTNIHTTPLIPSILLSF*VLPNDI Trigger: GATGTCATTTGGGAGGACTCAGAAGCTGAGGAGGAT...ACTTGGAATTAAAGGAGTTGTATGTATATTTGTGCAACACATCCATGCAGTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CCA 90 bp | TTGAGAACTGCATGGATGTGTTGCACAAATATACATACAACTCCTTTAATTCCACTGAACCGTACAAACTaGGGAAAGCCAAACACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRTAWMCCTNIHTTPLIPLNRTN*GKPNTG Trigger: CCCTGTGTTTGGCTTTCCCCAGTTTGTACGGTTCAG...TGGAATTAAAGGAGTTGTATGTATATTTGTGCAACACATCCATGCAGTTCTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR TCA 90 bp | TTGAGAACTGCATGGATGTGTTGCACAAATATACATACAACTCCTTTAATTCCAGTGTCCACAAATACCTaGGTGACATTCACATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRTAWMCCTNIHTTPLIPVSTNT*VTFTFW Trigger: CCAGAATGTGAATGTCACTCAGGTATTTGTGGACAC...TGGAATTAAAGGAGTTGTATGTATATTTGTGCAACACATCCATGCAGTTCTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTGCGACAACGACCCGTATaGTCCCTCTCCAGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGLEGQVVHTWAPRGCWLRQRPV*SLSSSL Trigger: CAGCGAGCTGGAGAGGGACAATACGGGTCGTTGTCG...CAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS CCA 90 bp | GATCTGCCAAGCGAGACAGGGGGCAGTAACAGATGGCGTAGACCATaGGACCAAGCACAGGGCCTCGGCCCGCTTCATCCACGCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DLPSETGGSNRWRRP*DQAQGLGPLHPRPE Trigger: TTCTGGGCGTGGATGAAGCGGGCCGAGGCCCTGTGCTTGGTCCCATGGTCTACGCCATCTGTTACTGCCCCCTGTCTCGCTTGGCAGATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
||
| CDS CCA 90 bp | TCAGGGCCTCCAGATCTGCCAAGCGAGACAGGGGGCAGTAACAGATaGCGTAGACCATGGGACCAAGCACAGGGCCTCGGCCCGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SGPPDLPSETGGSNR*RRPWDQAQGLGPLH Trigger: ATGAAGCGGGCCGAGGCCCTGTGCTTGGTCCCATGGTCTACGCCATCTGTTACTGCCCCCTGTCTCGCTTGGCAGATCTGGAGGCCCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTGAGTCCTCCCTGTGGGAGAGAGGGATGACTGGCCACTTCCCATCGGGCCGACAACGACCCGTATaGTCCCTCTCCAGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASESSLWERGMTGHFPSGRQRPV*SLSSSL Trigger: CAGCGAGCTGGAGAGGGACAATACGGGTCGTTGTCG...GCCCGATGGGAAGTGGCCAGTCATCCCTCTCTCCCACAGGGAGGACTCAGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTGTTGTCTCGGGCCACCTaGGCAAAGATGCTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGLEGQVVHTWAPRGCWLLSRAT*AKMLAA Trigger: TGCTGCCAGCATCTTTGCCAAGGTGGCCCGAGACAA...CAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTGAGAACGCACGGCTCCTaGAGACACACAGCAGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: PGLEGQVVHTWAPRGCWLRTHGS*RHTAGT Trigger: TGTACCTGCTGTGTGTCTCAAGGAGCCGTGCGTTCT...CAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGCTGGAGTCAGCTTTGGCCTaGACTGTCACCTCTATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PGLEGQVVHTWAPRGCWLESALA*TVTSIP Trigger: CGGGATAGAGGTGACAGTCAAGGCCAAAGCTGACTC...CAGCCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR CAA 90 bp | CTTGGGAGGCAGAGGCAGGTGAGTGCCACAATGTGCCCAAGACCAACCTGGTCTCGACAACGACCCGTATaGTCCCTCTCCAGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGRQRQVSATMCPRPTWSRQRPV*SLSSSL Trigger: CAGCGAGCTGGAGAGGGACAATACGGGTCGTTGTCG...AGACCAGGTTGGTCTTGGGCACATTGTGGCACTCACCTGCCTCTGCCTCCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CAA 90 bp | TGGCCACTTCCCATCGGGCTGAGTGAACGCATGGCCTCCCTTCCCCTGGTCTGTGAGTCAGCTTTGGCCTaGACTGTCACCTCTATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: WPLPIGLSERMASLPLVCESALA*TVTSIP Trigger: CGGGATAGAGGTGACAGTCAAGGCCAAAGCTGACTC...ACAGACCAGGGGAAGGGAGGCCATGCGTTCACTCAGCCCGATGGGAAGTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCAGCTTCTGAGTCCTCCCTGTGGGAGAGAGGGATGACTGGCCACTTCTTGTCTCGGGCCACCTaGGCAAAGATGCTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSASESSLWERGMTGHFLSRAT*AKMLAA Trigger: TGCTGCCAGCATCTTTGCCAAGGTGGCCCGAGACAA...GAAGTGGCCAGTCATCCCTCTCTCCCACAGGGAGGACTCAGAAGCTGAGGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
||
| CDS-3UTR CAA 90 bp | ATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTAGAGGCTGCTGGTCGTGTGACAGGGAGTaGAGGTTGTACTTGACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: IPGLEGQVVHTWAPRGCWSCDRE*RLYLTR Trigger: GCGAGTCAAGTACAACCTCAACTCCCTGTCACACGA...CCAGCAGCCTCTAGGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS GCA 90 bp | CTCTGTCAAGGTCTTAGAGTCTGCCACTTTCAGGGCCTCCAGATCTaGCAAGCGAGACAGGGGGCAGTAACAGATGGCGTAGACCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCQGLRVCHFQGLQI*QARQGAVTDGVDHG Trigger: CCCATGGTCTACGCCATCTGTTACTGCCCCCTGTCTCGCTTGGCAGATCTGGAGGCCCTGAAAGTGGCAGACTCTAAGACCTTGACAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCTTCTGAGTCCTCCCTGTGGGAGAGAGGGATGACTGGCCACTTCCCATCGTCGTGTGACAGGGAGTaGAGGTTGTACTTGACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SASESSLWERGMTGHFPSSCDRE*RLYLTR Trigger: GCGAGTCAAGTACAACCTCAACTCCCTGTCACACGA...CGATGGGAAGTGGCCAGTCATCCCTCTCTCCCACAGGGAGGACTCAGAAGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
||
| CDS-3UTR CAA 90 bp | CTTGGGAGGCAGAGGCAGGTGAGTGCCACAATGTGCCCAAGACCAACCTGGTCTAACAGGGAGTCAGCTTaGGCCTTGACTGTCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGRQRQVSATMCPRPTWSNRESA*ALTVTS Trigger: AGAGGTGACAGTCAAGGCCAAAGCTGACTCCCTGTT...AGACCAGGTTGGTCTTGGGCACATTGTGGCACTCACCTGCCTCTGCCTCCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CAA 90 bp | GTCTGCAGCTGTGTCTCAGGCCTGTCTGGTCTACGTAGCAAGTTCCAGGACAGTTTGTCTCGGGCCACCTaGGCAAAGATGCTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VCSCVSGLSGLRSKFQDSLSRAT*AKMLAA Trigger: TGCTGCCAGCATCTTTGCCAAGGTGGCCCGAGACAA...ACTGTCCTGGAACTTGCTACGTAGACCAGACAGGCCTGAGACACAGCTGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS CCA 90 bp | TTCTCCAGGATGGCCTGGGCTGTGCTCCAACTGAACCGTACAAACTaGGGAAAGCCAAACACAGGGTCCACATGTTTCCTCAGCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSRMAWAVLQLNRTN*GKPNTGSTCFLSQA Trigger: AGCCTGGCTGAGGAAACATGTGGACCCTGTGTTTGGCTTTCCCCAGTTTGTACGGTTCAGTTGGAGCACAGCCCAGGCCATCCTGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGCTGTGTCTCAGGCCTGTCTGGTCTACGTAGCAAGTTCCAGGACAGTCGAGTCAGCTTTGGCCTaGACTGTCACCTCTATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SAAVSQACLVYVASSRTVESALA*TVTSIP Trigger: CGGGATAGAGGTGACAGTCAAGGCCAAAGCTGACTC...GACTGTCCTGGAACTTGCTACGTAGACCAGACAGGCCTGAGACACAGCTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS CCA 90 bp | GAGTCCTCCCAAATGACATCTTCTGCCTCCTTCTCCAGGATGGCCTaGGCTGTGCTCCAACTGAACCGTACAAACTGGGGAAAGCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ESSQMTSSASFSRMA*AVLQLNRTNWGKPN Trigger: GTTTGGCTTTCCCCAGTTTGTACGGTTCAGTTGGAGCACAGCCCAGGCCATCCTGGAGAAGGAGGCAGAAGATGTCATTTGGGAGGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000147812.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGCTGTGTCTCAGGCCTGTCTGGTCTACGTAGCAAGTTCCAGGACAGTCTCGTGTGACAGGGAGTaGAGGTTGTACTTGACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SAAVSQACLVYVASSRTVSCDRE*RLYLTR Trigger: GCGAGTCAAGTACAACCTCAACTCCCTGTCACACGA...GACTGTCCTGGAACTTGCTACGTAGACCAGACAGGCCTGAGACACAGCTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CAA 90 bp | GGTGGCTCAAAAACACCTCCAACTCCAGTTGCAGGGGATCTGGTGCCCTCTTCTAACAGGGAGTCAGCTTaGGCCTTGACTGTCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGSKTPPTPVAGDLVPSSNRESA*ALTVTS Trigger: AGAGGTGACAGTCAAGGCCAAAGCTGACTCCCTGTT...AGAAGAGGGCACCAGATCCCCTGCAACTGGAGTTGGAGGTGTTTTTGAGCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CAA 90 bp | GGTGGCTCAAAAACACCTCCAACTCCAGTTGCAGGGGATCTGGTGCCCTCTTCTTTCCTCAGCCAGGCTTaGGTCTTGGGATCATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGSKTPPTPVAGDLVPSSFLSQA*VLGSLG Trigger: TCCCAATGATCCCAAGACCAAAGCCTGGCTGAGGAA...AGAAGAGGGCACCAGATCCCCTGCAACTGGAGTTGGAGGTGTTTTTGAGCCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS CCA 90 bp | GAGGTTGTACTTGACTCGCCCAAGCATGCTGGTAGAGATCAGGTTTaGAGACAGGACGTCCAAAGCCCAACCCACAAAGTCTCCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EVVLDSPKHAGRDQV*RQDVQSPTHKVSIL Trigger: GAGGATGGAGACTTTGTGGGTTGGGCTTTGGACGTCCTGTCTCCAAACCTGATCTCTACCAGCATGCTTGGGCGAGTCAAGTACAACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
||
| CDS-3UTR CAA 90 bp | TTGAACAGCTTTTATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCAACAGGGAGTCAGCTTaGGCCTTGACTGTCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LNSFYSWVRRAGGAHVGSNRESA*ALTVTS Trigger: AGAGGTGACAGTCAAGGCCAAAGCTGACTCCCTGTT...GGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAATAAAAGCTGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS-3UTR CAA 90 bp | TTGAACAGCTTTTATTCCTGGGTTAGAAGGGCAGGTGGTGCACACGTGGGCTCCTTCCTCAGCCAGGCTTaGGTCTTGGGATCATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LNSFYSWVRRAGGAHVGSFLSQA*VLGSLG Trigger: TCCCAATGATCCCAAGACCAAAGCCTGGCTGAGGAA...GGAGCCCACGTGTGCACCACCTGCCCTTCTAACCCAGGAATAAAAGCTGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065049.15 ENSMUST00000128972.9 |
||
| CDS GCA 90 bp | AGGGAGTCAGCTTTGGCCTTGACTGTCACCTCTATCCCGGGAAAGTaGTGTTGTAATCGAGCCTGGTATGTCTCTGGCATTCCTACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RESALALTVTSIPGK*CCNRAWYVSGIPTV Trigger: CACTGTAGGAATGCCAGAGACATACCAGGCTCGATTACAACAGCACTTTCCCGGGATAGAGGTGACAGTCAAGGCCAAAGCTGACTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
||
| CDS CCA 90 bp | GACACAAACCAAATGACATCTTCTGCCTCCTTCTCCAGGATGGCCTaGGCTGTGCTCCAACTGAACCGTACAAACTGGGGAAAGCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: DTNQMTSSASFSRMA*AVLQLNRTNWGKPN Trigger: GTTTGGCTTTCCCCAGTTTGTACGGTTCAGTTGGAGCACAGCCCAGGCCATCCTGGAGAAGGAGGCAGAAGATGTCATTTGGTTTGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128972.9 |
||
| CDS TCA 90 bp | CCTGGTATGTCTCTGGCATTCCTACAGTGTCCACAAATACCTGAGTaGCATTCACATTCTGGTCCAGTGCGTACTGTATCAGCCCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGMSLAFLQCPQIPE*HSHSGPVRTVSAPQ Trigger: CTGCGGGGCTGATACAGTACGCACTGGACCAGAATGTGAATGTCACTCAGGTATTTGTGGACACTGTAGGAATGCCAGAGACATACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
||
| CDS TCA 90 bp | CGAGCCTGGTATGTCTCTGGCATTCCTACAGTGTCCACAAATACCTaGGTGACATTCACATTCTGGTCCAGTGCGTACTGTATCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RAWYVSGIPTVSTNT*VTFTFWSSAYCISP Trigger: GGGGCTGATACAGTACGCACTGGACCAGAATGTGAATGTCACTCAGGTATTTGTGGACACTGTAGGAATGCCAGAGACATACCAGGCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCACTCGGTCCACTTCTTGAACAGCTTTTATTCCTGGGTTAGAAGGGCATTGTCTCGGGCCACCTaGGCAAAGATGCTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TKHSVHFLNSFYSWVRRALSRAT*AKMLAA Trigger: TGCTGCCAGCATCTTTGCCAAGGTGGCCCGAGACAA...TGCCCTTCTAACCCAGGAATAAAAGCTGTTCAAGAAGTGGACCGAGTGCTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CAA 90 bp | TCTTCTGCCGTGTCTGAAGACAGCTACAGTGTACTTACATACATAAATCATTCTCGACAACGACCCGTATaGTCCCTCTCCAGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSAVSEDSYSVLTYINHSRQRPV*SLSSSL Trigger: CAGCGAGCTGGAGAGGGACAATACGGGTCGTTGTCG...AGAATGATTTATGTATGTAAGTACACTGTAGCTGTCTTCAGACACGGCAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CAA 90 bp | AACGTCACCAATCTAGAAATGCCTATTTTGTTTGATGAATCAGCTGCTGGCCACGAGTCAGCTTTGGCCTaGACTGTCACCTCTATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: NVTNLEMPILFDESAAGHESALA*TVTSIP Trigger: CGGGATAGAGGTGACAGTCAAGGCCAAAGCTGACTC...GTGGCCAGCAGCTGATTCATCAAACAAAATAGGCATTTCTAGATTGGTGACGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CAA 90 bp | AACGTCACCAATCTAGAAATGCCTATTTTGTTTGATGAATCAGCTGCTGGCCACTTCCTCAGCCAGGCTTaGGTCTTGGGATCATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: NVTNLEMPILFDESAAGHFLSQA*VLGSLG Trigger: TCCCAATGATCCCAAGACCAAAGCCTGGCTGAGGAA...GTGGCCAGCAGCTGATTCATCAAACAAAATAGGCATTTCTAGATTGGTGACGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS-3UTR CAA 90 bp | TCTTCTGCCGTGTCTGAAGACAGCTACAGTGTACTTACATACATAAATCATTCTTCGTGTGACAGGGAGTaGAGGTTGTACTTGACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSAVSEDSYSVLTYINHSSCDRE*RLYLTR Trigger: GCGAGTCAAGTACAACCTCAACTCCCTGTCACACGA...AGAATGATTTATGTATGTAAGTACACTGTAGCTGTCTTCAGACACGGCAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 |
||
| CDS CCA 72 bp | AGCGAGACAGGGGGCAGTAACAGATGGCGTAGACCATaGGACCAAGCACAGGGCCTCGGCCCGCTTCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: SETGGSNRWRRP*DQAQGLGPLHP Trigger: TGGATGAAGCGGGCCGAGGCCCTGTGCTTGGTCCCATGGTCTACGCCATCTGTTACTGCCCCCTGTCTCGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
||
| CDS CCA 72 bp | CCAGATCTGCCAAGCGAGACAGGGGGCAGTAACAGATaGCGTAGACCATGGGACCAAGCACAGGGCCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PDLPSETGGSNR*RRPWDQAQGLG Trigger: GCCGAGGCCCTGTGCTTGGTCCCATGGTCTACGCCATCTGTTACTGCCCCCTGTCTCGCTTGGCAGATCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
||
| CDS TCA 72 bp | GGCCCGCTTCATCCACGCCCAGAACGCACGGCTCCTTaGGACACACAGCAGGTACAGGAGAACTCAGACGAC | + |
|
Preference number: 6 (lower is better) Translates to: GPLHPRPERTAP*DTQQVQENSDD Trigger: GTCGTCTGAGTTCTCCTGTACCTGCTGTGTGTCTCAAGGAGCCGTGCGTTCTGGGCGTGGATGAAGCGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000140561.8 ENSMUST00000147812.8 |
||
| CDS CAA 72 bp | CTGGCAGCACTGACCACAGGGAACAGGGAGTCAGCTTaGGCCTTGACTGTCACCTCTATCCCGGGAAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LAALTTGNRESA*ALTVTSIPGKC Trigger: GCACTTTCCCGGGATAGAGGTGACAGTCAAGGCCAAAGCTGACTCCCTGTTCCCTGTGGTCAGTGCTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS GCA 72 bp | GGTCTTAGAGTCTGCCACTTTCAGGGCCTCCAGATCTaGCAAGCGAGACAGGGGGCAGTAACAGATGGCGTA | + |
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Preference number: 6 (lower is better) Translates to: GLRVCHFQGLQI*QARQGAVTDGV Trigger: TACGCCATCTGTTACTGCCCCCTGTCTCGCTTGGCAGATCTGGAGGCCCTGAAAGTGGCAGACTCTAAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS CAA 72 bp | AACTGCCAGTTCTTCACAGCCTTGTCTCGGGCCACCTaGGCAAAGATGCTGGCAGCACTGACCACAGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: NCQFFTALSRAT*AKMLAALTTGN Trigger: GTTCCCTGTGGTCAGTGCTGCCAGCATCTTTGCCAAGGTGGCCCGAGACAAGGCTGTGAAGAACTGGCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS CAA 90 bp | ATGCTGGCAGCACTGACCACAGGGAACAGGGAGTCAGCTTTGGCCTaGACTGTCACCTCTATCCCGGGAAAGTGCTGTTGTAATCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: MLAALTTGNRESALA*TVTSIPGKCCCNRA Trigger: GGCTCGATTACAACAGCACTTTCCCGGGATAGAGGTGACAGTCAAGGCCAAAGCTGACTCCCTGTTCCCTGTGGTCAGTGCTGCCAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS CAA 72 bp | AGCCCCGCAGCTGTATCGTGTGACAGGGAGTTGAGGTaGTACTTGACTCGCCCAAGCATGCTGGTAGAGATC | + |
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Preference number: 6 (lower is better) Translates to: SPAAVSCDRELR*YLTRPSMLVEI Trigger: GATCTCTACCAGCATGCTTGGGCGAGTCAAGTACAACCTCAACTCCCTGTCACACGATACAGCTGCGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS CAA 90 bp | TTTTCCACAAACTGCCAGTTCTTCACAGCCTTGTCTCGGGCCACCTaGGCAAAGATGCTGGCAGCACTGACCACAGGGAACAGGGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: FSTNCQFFTALSRAT*AKMLAALTTGNRES Trigger: TGACTCCCTGTTCCCTGTGGTCAGTGCTGCCAGCATCTTTGCCAAGGTGGCCCGAGACAAGGCTGTGAAGAACTGGCAGTTTGTGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS CCA 72 bp | CTTGACTCGCCCAAGCATGCTGGTAGAGATCAGGTTTaGAGACAGGACGTCCAAAGCCCAACCCACAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: LDSPKHAGRDQV*RQDVQSPTHKV Trigger: GACTTTGTGGGTTGGGCTTTGGACGTCCTGTCTCCAAACCTGATCTCTACCAGCATGCTTGGGCGAGTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS CCA 72 bp | ATGGCCTGGGCTGTGCTCCAACTGAACCGTACAAACTaGGGAAAGCCAAACACAGGGTCCACATGTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: MAWAVLQLNRTN*GKPNTGSTCFL Trigger: GAGGAAACATGTGGACCCTGTGTTTGGCTTTCCCCAGTTTGTACGGTTCAGTTGGAGCACAGCCCAGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS CAA 72 bp | TGTATCAGCCCCGCAGCTGTATCGTGTGACAGGGAGTaGAGGTTGTACTTGACTCGCCCAAGCATGCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: CISPAAVSCDRE*RLYLTRPSMLV Trigger: TACCAGCATGCTTGGGCGAGTCAAGTACAACCTCAACTCCCTGTCACACGATACAGCTGCGGGGCTGATACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS CAA 90 bp | GCAAAGATGCTGGCAGCACTGACCACAGGGAACAGGGAGTCAGCTTaGGCCTTGACTGTCACCTCTATCCCGGGAAAGTGCTGTTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: AKMLAALTTGNRESA*ALTVTSIPGKCCCN Trigger: ATTACAACAGCACTTTCCCGGGATAGAGGTGACAGTCAAGGCCAAAGCTGACTCCCTGTTCCCTGTGGTCAGTGCTGCCAGCATCTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS GCA 72 bp | GCTTTGGCCTTGACTGTCACCTCTATCCCGGGAAAGTaGTGTTGTAATCGAGCCTGGTATGTCTCTGGCATT | + |
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Preference number: 6 (lower is better) Translates to: ALALTVTSIPGK*CCNRAWYVSGI Trigger: AATGCCAGAGACATACCAGGCTCGATTACAACAGCACTTTCCCGGGATAGAGGTGACAGTCAAGGCCAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS TCA 72 bp | GATTTTTCCCGGTCTTTCAGGATCCTCCTCAGCTTCTaGGTCCTCCCAAATGACATCTTCTGCCTCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: DFSRSFRILLSF*VLPNDIFCLLL Trigger: GAGAAGGAGGCAGAAGATGTCATTTGGGAGGACTCAGAAGCTGAGGAGGATCCTGAAAGACCGGGAAAAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000147812.8 |
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| CDS CAA 72 bp | TGTAAATTTTCCACAAACTGCCAGTTCTTCACAGCCTaGTCTCGGGCCACCTTGGCAAAGATGCTGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CKFSTNCQFFTA*SRATLAKMLAA Trigger: TGCTGCCAGCATCTTTGCCAAGGTGGCCCGAGACAAGGCTGTGAAGAACTGGCAGTTTGTGGAAAATTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS CCA 72 bp | ACCTCTATCCCGGGAAAGTGCTGTTGTAATCGAGCCTaGTATGTCTCTGGCATTCCTACAGTGTCCACAAAT | + |
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Preference number: 6 (lower is better) Translates to: TSIPGKCCCNRA*YVSGIPTVSTN Trigger: ATTTGTGGACACTGTAGGAATGCCAGAGACATACCAGGCTCGATTACAACAGCACTTTCCCGGGATAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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| CDS TCA 72 bp | TCTCTGGCATTCCTACAGTGTCCACAAATACCTGAGTaGCATTCACATTCTGGTCCAGTGCGTACTGTATCA | + |
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Preference number: 6 (lower is better) Translates to: SLAFLQCPQIPE*HSHSGPVRTVS Trigger: TGATACAGTACGCACTGGACCAGAATGTGAATGTCACTCAGGTATTTGTGGACACTGTAGGAATGCCAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065049.15 ENSMUST00000109736.9 ENSMUST00000109738.10 ENSMUST00000128972.9 ENSMUST00000147812.8 |
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