Pregenerated sensors for RNASE6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021880Ensembl transcript IDs: ENSMUST00000095923.4, ENSMUST00000226194.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCCCCCAGCCTTGAGCAGCCGGCTCAGACCTGTTCTGCCACTGTaGGCAAGACCACCTAGAGTGGAGCCTTCTGACCTAGATAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: SPPALSSRLRPVLPL*ARPPRVEPSDLDRS Trigger: AGACCTATCTAGGTCAGAAGGCTCCACTCTAGGTGGTCTTGCTCACAGTGGCAGAACAGGTCTGAGCCGGCTGCTCAAGGCTGGGGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR TCA 90 bp | CTGTCTCTACTCAGACAACTGCTCCTCTGTAGTCTCCCCCAGCCTTaGGCAGCCGGCTCAGACCTGTTCTGCCACTGTGAGCAAGACCAC | + |
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Preference number: 1 (lower is better) Translates to: LSLLRQLLLCSLPQP*AAGSDLFCHCEQDH Trigger: GTGGTCTTGCTCACAGTGGCAGAACAGGTCTGAGCCGGCTGCTCAAGGCTGGGGGAGACTACAGAGGAGCAGTTGTCTGAGTAGAGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 90 bp | TCCTGGGCCTGGAAACAGGATCCTGGTTCAACCCTTCCAGCAAGATaGAGAAGCTGTCTCTACTCAGACAACTGCTCCTCTGTAGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: SWAWKQDPGSTLPAR*RSCLYSDNCSSVVS Trigger: GGAGACTACAGAGGAGCAGTTGTCTGAGTAGAGACAGCTTCTCCATCTTGCTGGAAGGGTTGAACCAGGATCCTGTTTCCAGGCCCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR TCA 90 bp | TGTTCTGCCACCTCTGCGGGTTTTCTCCAAGACACAGCCACTGGCTaGGAGGCTGAACCTGAACCTGAGACATTCCTAAGTAAGCAACAG | + |
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Preference number: 1 (lower is better) Translates to: CSATSAGFLQDTATG*EAEPEPETFLSKQQ Trigger: CTGTTGCTTACTTAGGAATGTCTCAGGTTCAGGTTCAGCCTCTCAGCCAGTGGCTGTGTCTTGGAGAAAACCCGCAGAGGTGGCAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 90 bp | GCCAGGGAGTTTTCACCAATCATGTTAGGAGTAGGTTCCTGGGCCTaGAAACAGGATCCTGGTTCAACCCTTCCAGCAAGATGGAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: AREFSPIMLGVGSWA*KQDPGSTLPARWRS Trigger: GCTTCTCCATCTTGCTGGAAGGGTTGAACCAGGATCCTGTTTCCAGGCCCAGGAACCTACTCCTAACATGATTGGTGAAAACTCCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 90 bp | GAATCTAAGTTTCTTTTGCTTGTTCCCAACATGCCTATCTCCACGTaGCTTGTGTGTAGCCAGTATGTGCCTGGTGCCTGCTGGTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: ESKFLLLVPNMPIST*LVCSQYVPGACWWL Trigger: CAGCCACCAGCAGGCACCAGGCACATACTGGCTACACACAAGCCACGTGGAGATAGGCATGTTGGGAACAAGCAAAAGAAACTTAGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 90 bp | ACCAATCATGTTAGGAGTAGGTTCCTGGGCCTGGAAACAGGATCCTaGTTCAACCCTTCCAGCAAGATGGAGAAGCTGTCTCTACTCAGA | + |
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Preference number: 1 (lower is better) Translates to: TNHVRSRFLGLETGS*FNPSSKMEKLSLLR Trigger: TCTGAGTAGAGACAGCTTCTCCATCTTGCTGGAAGGGTTGAACCAGGATCCTGTTTCCAGGCCCAGGAACCTACTCCTAACATGATTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR GCA 90 bp | GGCCACAGAACAGACTTGGGAACTGAACTTCAGGGTGGGCTGTATTaGACTCTCCAATCATATTTTGGTAAAAGGGATGTGAGCCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: GHRTDLGTELQGGLY*TLQSYFGKRDVSQG Trigger: TCCCTGGCTCACATCCCTTTTACCAAAATATGATTGGAGAGTGCAATACAGCCCACCCTGAAGTTCAGTTCCCAAGTCTGTTCTGTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 90 bp | CAGCTGTGGGCGGCTACACTCCTTTCCAAGTTGTCCCTGAGATGTTaGGATTCAGACAACTGTTTCCTTATAGTAAGACCTACTCGTCTA | + |
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Preference number: 1 (lower is better) Translates to: QLWAATLLSKLSLRC*DSDNCFLIVRPTRL Trigger: TAGACGAGTAGGTCTTACTATAAGGAAACAGTTGTCTGAATCCCAACATCTCAGGGACAACTTGGAAAGGAGTGTAGCCGCCCACAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 90 bp | CTTTGGGCCTTGATCATTATCTTTGTCTTGGTCTCGTTATTTCTCTaGATATTTTCTCCCATGCAGCCCCAGCCTCCCTTTCGGGAACCT | + |
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Preference number: 1 (lower is better) Translates to: LWALIIIFVLVSLFL*IFSPMQPQPPFREP Trigger: AGGTTCCCGAAAGGGAGGCTGGGGCTGCATGGGAGAAAATATCCAGAGAAATAACGAGACCAAGACAAAGATAATGATCAAGGCCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAACTGAACTTCAGGGTGGGCTGTATTGCACTCTCCAATCATATTTTGGTAGTGCCTGGTGCCTGCTaGTGGCTGCTTGCCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: WELNFRVGCIALSNHILVVPGAC*WLLAWW Trigger: CCACCAGGCAAGCAGCCACCAGCAGGCACCAGGCAC...TACCAAAATATGATTGGAGAGTGCAATACAGCCCACCCTGAAGTTCAGTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CAA 90 bp | CTAAGTTTCTTTTGCTTGTTCCCAACATGCCTATCTCCACGTGGCTaGTGTGTAGCCAGTATGTGCCTGGTGCCTGCTGGTGGCTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LSFFCLFPTCLSPRG*CVASMCLVPAGGCL Trigger: CAAGCAGCCACCAGCAGGCACCAGGCACATACTGGCTACACACAAGCCACGTGGAGATAGGCATGTTGGGAACAAGCAAAAGAAACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR-3UTR TCA 90 bp | GGATCCTGGTTCAACCCTTCCAGCAAGATGGAGAAGCTGTCTCTACTCAGACAACCTGCTTTGGGAACATaGACCTCACACAGTAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GSWFNPSSKMEKLSLLRQPALGT*TSHSRR Trigger: CCTCCTACTGTGTGAGGTTCATGTTCCCAAAGCAGG...TTGTCTGAGTAGAGACAGCTTCTCCATCTTGCTGGAAGGGTTGAACCAGGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR-3UTR GCA 90 bp | AAACAGGATCCTGGTTCAACCCTTCCAGCAAGATGGAGAAGCTGTCTCTACTCAACCCTCCCCCTTTCCTaGTTTGGGAACATGAACCTC | + |
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Preference number: 2 (lower is better) Translates to: KQDPGSTLPARWRSCLYSTLPLS*FGNMNL Trigger: GAGGTTCATGTTCCCAAAGCAGGAAAGGGGGAGGGT...TGAGTAGAGACAGCTTCTCCATCTTGCTGGAAGGGTTGAACCAGGATCCTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR-3UTR CCA 90 bp | GCGGCTACACTCCTTTCCAAGTTGTCCCTGAGATGTTGGGATTCAGACAACTGTCCCCCTTTCCTGCTTTaGGAACATGAACCTCACACA | + |
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Preference number: 2 (lower is better) Translates to: AATLLSKLSLRCWDSDNCPPFLL*EHEPHT Trigger: TGTGTGAGGTTCATGTTCCCAAAGCAGGAAAGGGGG...ACAGTTGTCTGAATCCCAACATCTCAGGGACAACTTGGAAAGGAGTGTAGCCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTTAAGTAAACTTTGGGCCTTGATCATTATCTTTGTCTTGGTCTCGTTATTTCCTCCTGGCCCCCAGTaGCCCTCCCCCTTTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LLSKLWALIIIFVLVSLFPPGPQ*PSPFPA Trigger: AGCAGGAAAGGGGGAGGGTCACTGGGGGCCAGGAGG...AAATAACGAGACCAAGACAAAGATAATGATCAAGGCCCAAAGTTTACTTAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGAACTGAACTTCAGGGTGGGCTGTATTGCACTCTCCAATCATATTTTGGTAGGCTCAGACCTGTTCTaGCACTGTGAGCAAGACCAC | + |
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Preference number: 2 (lower is better) Translates to: WELNFRVGCIALSNHILVGSDLF*HCEQDH Trigger: GTGGTCTTGCTCACAGTGGCAGAACAGGTCTGAGCC...TACCAAAATATGATTGGAGAGTGCAATACAGCCCACCCTGAAGTTCAGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR-3UTR CCA 90 bp | GGATCCTGGTTCAACCCTTCCAGCAAGATGGAGAAGCTGTCTCTACTCAGACAAGTCTCGTTATTTCTCTaGATATTTTCTCCCATGCAG | + |
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Preference number: 2 (lower is better) Translates to: GSWFNPSSKMEKLSLLRQVSLFL*IFSPMQ Trigger: CTGCATGGGAGAAAATATCCAGAGAAATAACGAGAC...TTGTCTGAGTAGAGACAGCTTCTCCATCTTGCTGGAAGGGTTGAACCAGGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CAA 90 bp | CTCAGACTCTTAAGTAAACTTTGGGCCTTGATCATTATCTTTGTCTaGGTCTCGTTATTTCTCTGGATATTTTCTCCCATGCAGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LRLLSKLWALIIIFV*VSLFLWIFSPMQPQ Trigger: CTGGGGCTGCATGGGAGAAAATATCCAGAGAAATAACGAGACCAAGACAAAGATAATGATCAAGGCCCAAAGTTTACTTAAGAGTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTTAAGTAAACTTTGGGCCTTGATCATTATCTTTGTCTTGGTCTCGTTATTTGGCTTTAGGCTGGAGTaGAAGATGATTGTGAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LLSKLWALIIIFVLVSLFGFRLE*KMIVSP Trigger: AGGACTCACAATCATCTTTCACTCCAGCCTAAAGCC...AAATAACGAGACCAAGACAAAGATAATGATCAAGGCCCAAAGTTTACTTAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 72 bp | TTCTCCCATGCAGCCCCAGCCTCCCTTTCGGGAACCTaGTTCGTACAGCTGTGGGCGGCTACACTCCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: FSHAAPASLSGT*FVQLWAATLLS Trigger: GGAAAGGAGTGTAGCCGCCCACAGCTGTACGAACCAGGTTCCCGAAAGGGAGGCTGGGGCTGCATGGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR-3UTR CAA 90 bp | GATATTTTCTCCCATGCAGCCCCAGCCTCCCTTTCGGGAACCTGGTTCGTACAGCCTGCTGGTGGCTGCTaGCCTGGTGGCTTTAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: DIFSHAAPASLSGTWFVQPAGGC*PGGFRL Trigger: CAGCCTAAAGCCACCAGGCAAGCAGCCACCAGCAGG...CTGTACGAACCAGGTTCCCGAAAGGGAGGCTGGGGCTGCATGGGAGAAAATATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 72 bp | CCAGCCTCCCTTTCGGGAACCTGGTTCGTACAGCTGTaGGCGGCTACACTCCTTTCCAAGTTGTCCCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: PASLSGTWFVQL*AATLLSKLSLR Trigger: TCTCAGGGACAACTTGGAAAGGAGTGTAGCCGCCCACAGCTGTACGAACCAGGTTCCCGAAAGGGAGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR TCA 72 bp | GCTGGTGGCTGCTTGCCTGGTGGCTTTAGGCTGGAGTaGAAGATGATTGTGAGTCCTCAAAATCTCTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: AGGCLPGGFRLE*KMIVSPQNLSS Trigger: GCTGGAGAGATTTTGAGGACTCACAATCATCTTTCACTCCAGCCTAAAGCCACCAGGCAAGCAGCCACCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR TCA 72 bp | ACCTCTGCGGGTTTTCTCCAAGACACAGCCACTGGCTaGGAGGCTGAACCTGAACCTGAGACATTCCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: TSAGFLQDTATG*EAEPEPETFLS Trigger: ACTTAGGAATGTCTCAGGTTCAGGTTCAGCCTCTCAGCCAGTGGCTGTGTCTTGGAGAAAACCCGCAGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 72 bp | GTTAGGAGTAGGTTCCTGGGCCTGGAAACAGGATCCTaGTTCAACCCTTCCAGCAAGATGGAGAAGCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: VRSRFLGLETGS*FNPSSKMEKLS Trigger: AGACAGCTTCTCCATCTTGCTGGAAGGGTTGAACCAGGATCCTGTTTCCAGGCCCAGGAACCTACTCCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 72 bp | TTTCTTTTGCTTGTTCCCAACATGCCTATCTCCACGTaGCTTGTGTGTAGCCAGTATGTGCCTGGTGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: FLLLVPNMPIST*LVCSQYVPGAC Trigger: GCAGGCACCAGGCACATACTGGCTACACACAAGCCACGTGGAGATAGGCATGTTGGGAACAAGCAAAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 72 bp | AGGGAGTTTTCACCAATCATGTTAGGAGTAGGTTCCTaGGCCTGGAAACAGGATCCTGGTTCAACCCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: REFSPIMLGVGS*AWKQDPGSTLP Trigger: TGGAAGGGTTGAACCAGGATCCTGTTTCCAGGCCCAGGAACCTACTCCTAACATGATTGGTGAAAACTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 72 bp | TTTTCACCAATCATGTTAGGAGTAGGTTCCTGGGCCTaGAAACAGGATCCTGGTTCAACCCTTCCAGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: FSPIMLGVGSWA*KQDPGSTLPAR Trigger: TCTTGCTGGAAGGGTTGAACCAGGATCCTGTTTCCAGGCCCAGGAACCTACTCCTAACATGATTGGTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR-3UTR CAA 90 bp | AAACAGGATCCTGGTTCAACCCTTCCAGCAAGATGGAGAAGCTGTCTCTACTCAGAATCTAAGTTTCTTTaGCTTGTTCCCAACATGCCT | + |
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Preference number: 3 (lower is better) Translates to: KQDPGSTLPARWRSCLYSESKFL*LVPNMP Trigger: AGGCATGTTGGGAACAAGCAAAAGAAACTTAGATTC...TGAGTAGAGACAGCTTCTCCATCTTGCTGGAAGGGTTGAACCAGGATCCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR GCA 72 bp | ACAGACTTGGGAACTGAACTTCAGGGTGGGCTGTATTaGACTCTCCAATCATATTTTGGTAAAAGGGATGTG | + |
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Preference number: 3 (lower is better) Translates to: TDLGTELQGGLY*TLQSYFGKRDV Trigger: CACATCCCTTTTACCAAAATATGATTGGAGAGTGCAATACAGCCCACCCTGAAGTTCAGTTCCCAAGTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 72 bp | TTGATCATTATCTTTGTCTTGGTCTCGTTATTTCTCTaGATATTTTCTCCCATGCAGCCCCAGCCTCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: LIIIFVLVSLFL*IFSPMQPQPPF Trigger: AAAGGGAGGCTGGGGCTGCATGGGAGAAAATATCCAGAGAAATAACGAGACCAAGACAAAGATAATGATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR TCA 72 bp | GCAAATGACAAAATTTTATTGCAATCAAGCTGCTACTaGTTGATTAGGGCCACAGAACAGACTTGGGAACTG | + |
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Preference number: 3 (lower is better) Translates to: ANDKILLQSSCY*LIRATEQTWEL Trigger: CAGTTCCCAAGTCTGTTCTGTGGCCCTAATCAATCAGTAGCAGCTTGATTGCAATAAAATTTTGTCATTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CCA 72 bp | TTCCCCCTTTATAAGCTCAGACTCTTAAGTAAACTTTaGGCCTTGATCATTATCTTTGTCTTGGTCTCGTTA | + |
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Preference number: 3 (lower is better) Translates to: FPLYKLRLLSKL*ALIIIFVLVSL Trigger: TAACGAGACCAAGACAAAGATAATGATCAAGGCCCAAAGTTTACTTAAGAGTCTGAGCTTATAAAGGGGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR-3UTR CAA 90 bp | TTGATCATTATCTTTGTCTTGGTCTCGTTATTTCTCTGGATATTTTCTCCCATGCTAAGTTTCTTTTGCTaGTTCCCAACATGCCTATCT | + |
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Preference number: 3 (lower is better) Translates to: LIIIFVLVSLFLWIFSPMLSFFC*FPTCLS Trigger: AGATAGGCATGTTGGGAACAAGCAAAAGAAACTTAG...CATGGGAGAAAATATCCAGAGAAATAACGAGACCAAGACAAAGATAATGATCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| CDS-3UTR TCA 90 bp | GGTCTCGTTATTTCTCTGGATATTTTCTCCCATGCAGCCCCAGCCTCCCTTTCGGGCTCCTCCAGTGTGTaGGCAGTCAGTCATCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: GLVISLDIFSHAAPASLSGSSSV*AVSHLD Trigger: GTCAAGATGACTGACTGCTCACACACTGGAGGAGCC...CGAAAGGGAGGCTGGGGCTGCATGGGAGAAAATATCCAGAGAAATAACGAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| 3UTR CAA 72 bp | TTTTGCTTGTTCCCAACATGCCTATCTCCACGTGGCTaGTGTGTAGCCAGTATGTGCCTGGTGCCTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: FCLFPTCLSPRG*CVASMCLVPAG Trigger: ACCAGCAGGCACCAGGCACATACTGGCTACACACAAGCCACGTGGAGATAGGCATGTTGGGAACAAGCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| CDS-3UTR TCA 90 bp | ATAGAACCCAGGGACCTCTGTGCACTAAGCAAGTGCTCATTGACGGAGCTCCATAGCAGTCAGTCATCTTaGCAGGTTCTGCGCTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: IEPRDLCALSKCSLTELHSSQSS*QVLRSR Trigger: ACGAGAGCGCAGAACCTGTCAAGATGACTGACTGCT...ATGGAGCTCCGTCAATGAGCACTTGCTTAGTGCACAGAGGTCCCTGGGTTCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| 3UTR CAA 72 bp | GAACCCAGGGACCTCTGTGCACTAAGCAAGTGCTCATaGACGGAGCTCCATCATAACCCATGCACTCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: EPRDLCALSKCS*TELHHNPCTLF Trigger: AAAAAGAGTGCATGGGTTATGATGGAGCTCCGTCAATGAGCACTTGCTTAGTGCACAGAGGTCCCTGGGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| 3UTR CAA 72 bp | TTCGTACAGCTGTGGGCGGCTACACTCCTTTCCAAGTaGTCCCTGAGATGTTGGGATTCAGACAACTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: FVQLWAATLLSK*SLRCWDSDNCF Trigger: GAAACAGTTGTCTGAATCCCAACATCTCAGGGACAACTTGGAAAGGAGTGTAGCCGCCCACAGCTGTACGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| CDS-3UTR GCA 90 bp | GGATCCTGGTTCAACCCTTCCAGCAAGATGGAGAAGCTGTCTCTACTCAGACAAAATTTCAAACCAGTGTaGCCTGGAGAGACCCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: GSWFNPSSKMEKLSLLRQNFKPV*PGETLR Trigger: CCTAAGGGTCTCTCCAGGGCACACTGGTTTGAAATT...TTGTCTGAGTAGAGACAGCTTCTCCATCTTGCTGGAAGGGTTGAACCAGGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| CDS-3UTR TCA 90 bp | TTAATTCTTCCAACACCTTCCCTTTTCTGTGGGAACAGAAGGCAAAGTGGAATAGGCTCCTCCAGTGTGTaGGCAGTCAGTCATCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: LILPTPSLFCGNRRQSGIGSSSV*AVSHLD Trigger: GTCAAGATGACTGACTGCTCACACACTGGAGGAGCC...TATTCCACTTTGCCTTCTGTTCCCACAGAAAAGGGAAGGTGTTGGAAGAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR GCA 90 bp | AGGCATCTTAATTCTTCCAACACCTTCCCTTTTCTGTGGGAACAGAAGGCAAAGCATCTTGACAGGTTCTaGGCTCTCGTGGCAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RHLNSSNTFPFLWEQKAKHLDRF*ALVAVL Trigger: AAGAACTGCCACGAGAGCGCAGAACCTGTCAAGATG...CTTTGCCTTCTGTTCCCACAGAAAAGGGAAGGTGTTGGAAGAATTAAGATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR TCA 90 bp | AGGCATCTTAATTCTTCCAACACCTTCCCTTTTCTGTGGGAACAGAAGGCAAAGCTTGTCTGTACGTGCTaGATTTCAAACCAGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RHLNSSNTFPFLWEQKAKLVCTC*ISNQCA Trigger: GGCACACTGGTTTGAAATTCAGCACGTACAGACAAG...CTTTGCCTTCTGTTCCCACAGAAAAGGGAAGGTGTTGGAAGAATTAAGATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR CCA 90 bp | AGGCATCTTAATTCTTCCAACACCTTCCCTTTTCTGTGGGAACAGAAGGCAAAGAGGGTCTTCCTTCTTTaGGTGTTCACAGGCCACAAT | + |
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Preference number: 4 (lower is better) Translates to: RHLNSSNTFPFLWEQKAKRVFLL*VFTGHN Trigger: ATTGTGGCCTGTGAACACCCAAAGAAGGAAGACCCT...CTTTGCCTTCTGTTCCCACAGAAAAGGGAAGGTGTTGGAAGAATTAAGATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR CCA 90 bp | TGGGAACTGAACTTCAGGGTGGGCTGTATTGCACTCTCCAATCATATTTTGGTAAGGGTCTTCCTTCTTTaGGTGTTCACAGGCCACAAT | + |
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Preference number: 4 (lower is better) Translates to: WELNFRVGCIALSNHILVRVFLL*VFTGHN Trigger: ATTGTGGCCTGTGAACACCCAAAGAAGGAAGACCCT...TACCAAAATATGATTGGAGAGTGCAATACAGCCCACCCTGAAGTTCAGTTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| CDS-3UTR GCA 90 bp | GGTCTCGTTATTTCTCTGGATATTTTCTCCCATGCAGCCCCAGCCTCCCTTTCGTTCTGGAAAGATTCATaGAGAAAGGTGTTTATCTGT | + |
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Preference number: 4 (lower is better) Translates to: GLVISLDIFSHAAPASLSFWKDS*RKVFIC Trigger: ACAGATAAACACCTTTCTGCATGAATCTTTCCAGAA...CGAAAGGGAGGCTGGGGCTGCATGGGAGAAAATATCCAGAGAAATAACGAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| CDS-3UTR TCA 90 bp | TTAATTCTTCCAACACCTTCCCTTTTCTGTGGGAACAGAAGGCAAAGTGGAATAGAGAGACCCTTAGGCTaGGAGCAAAGTAGATACATC | + |
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Preference number: 4 (lower is better) Translates to: LILPTPSLFCGNRRQSGIERPLG*EQSRYI Trigger: GATGTATCTACTTTGCTCTCAGCCTAAGGGTCTCTC...TATTCCACTTTGCCTTCTGTTCCCACAGAAAAGGGAAGGTGTTGGAAGAATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR TCA 90 bp | GGGAACAGAAGGCAAAGTGGAATAAACTGTAAGAGAACCTGTATCAAACAGAAGCTTGTCTGTACGTGCTaGATTTCAAACCAGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: GNRRQSGINCKRTCIKQKLVCTC*ISNQCA Trigger: GGCACACTGGTTTGAAATTCAGCACGTACAGACAAG...CTTCTGTTTGATACAGGTTCTCTTACAGTTTATTCCACTTTGCCTTCTGTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR GCA 90 bp | TTAATTCTTCCAACACCTTCCCTTTTCTGTGGGAACAGAAGGCAAAGTGGAATAAATTTCAAACCAGTGTaGCCTGGAGAGACCCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: LILPTPSLFCGNRRQSGINFKPV*PGETLR Trigger: CCTAAGGGTCTCTCCAGGGCACACTGGTTTGAAATT...TATTCCACTTTGCCTTCTGTTCCCACAGAAAAGGGAAGGTGTTGGAAGAATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR CCA 90 bp | CCAACACCTTCCCTTTTCTGTGGGAACAGAAGGCAAAGTGGAATAAACTGTAAGGTAGCAGCCACATTCTaGAAAGATTCATGCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: PTPSLFCGNRRQSGINCKVAATF*KDSCRK Trigger: CTTTCTGCATGAATCTTTCCAGAATGTGGCTGCTAC...CTTACAGTTTATTCCACTTTGCCTTCTGTTCCCACAGAAAAGGGAAGGTGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR CCA 90 bp | GGCATCTTAATTCTTCCAACACCTTCCCTTTTCTGTGGGAACAGAAGGCAAAGTGTAGCAGCCACATTCTaGAAAGATTCATGCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: GILILPTPSLFCGNRRQSVAATF*KDSCRK Trigger: CTTTCTGCATGAATCTTTCCAGAATGTGGCTGCTAC...ACTTTGCCTTCTGTTCCCACAGAAAAGGGAAGGTGTTGGAAGAATTAAGATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR TCA 90 bp | CAAAGTGGAATAAACTGTAAGAGAACCTGTATCAAACAGAAGAAAAGGCCTAGCGAGAGACCCTTAGGCTaGGAGCAAAGTAGATACATC | + |
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Preference number: 4 (lower is better) Translates to: QSGINCKRTCIKQKKRPSERPLG*EQSRYI Trigger: GATGTATCTACTTTGCTCTCAGCCTAAGGGTCTCTC...GCTAGGCCTTTTCTTCTGTTTGATACAGGTTCTCTTACAGTTTATTCCACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR GCA 90 bp | GGGAACAGAAGGCAAAGTGGAATAAACTGTAAGAGAACCTGTATCAAACAGAAGTTCTGGAAAGATTCATaGAGAAAGGTGTTTATCTGT | + |
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Preference number: 4 (lower is better) Translates to: GNRRQSGINCKRTCIKQKFWKDS*RKVFIC Trigger: ACAGATAAACACCTTTCTGCATGAATCTTTCCAGAA...CTTCTGTTTGATACAGGTTCTCTTACAGTTTATTCCACTTTGCCTTCTGTTCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR CAA 90 bp | ATAGAACCCAGGGACCTCTGTGCACTAAGCAAGTGCTCATTGACGGAGCTCCATGAGGGTCTTCCTTCTTaGGGTGTTCACAGGCCACAA | + |
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Preference number: 5 (lower is better) Translates to: IEPRDLCALSKCSLTELHEGLPS*GVHRPQ Trigger: TTGTGGCCTGTGAACACCCAAAGAAGGAAGACCCTC...ATGGAGCTCCGTCAATGAGCACTTGCTTAGTGCACAGAGGTCCCTGGGTTCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS TCA 90 bp | CTTATCACTACTATAGCGGCAGTTAGGATAGGCTCCTCCAGTGTGTaGGCAGTCAGTCATCTTGACAGGTTCTGCGCTCTCGTGGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LITTIAAVRIGSSSV*AVSHLDRFCALVAV Trigger: AACTGCCACGAGAGCGCAGAACCTGTCAAGATGACTGACTGCTCACACACTGGAGGAGCCTATCCTAACTGCCGCTATAGTAGTGATAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS GCA 90 bp | GCGCTCTCGTGGCAGTTCTTCCGACCGTTCTTGCAGGTGATATTGTaGAAACTGCAGGTAGCAGCCACATTCTGGAAAGATTCATGCAGA | + |
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Preference number: 5 (lower is better) Translates to: ALSWQFFRPFLQVIL*KLQVAATFWKDSCR Trigger: TCTGCATGAATCTTTCCAGAATGTGGCTGCTACCTGCAGTTTGCACAATATCACCTGCAAGAACGGTCGGAAGAACTGCCACGAGAGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR CAA 90 bp | TCTCCACGTGGCTTGTGTGTAGCCAGTATGTGCCTGGTGCCTGCTGGTGGCTGCTATCTGTTTACAGTGTaGGGTATAATTGTTGACACC | + |
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Preference number: 5 (lower is better) Translates to: SPRGLCVASMCLVPAGGCYLFTV*GIIVDT Trigger: GGTGTCAACAATTATACCCAACACTGTAAACAGATA...GCAGCCACCAGCAGGCACCAGGCACATACTGGCTACACACAAGCCACGTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226194.2 |
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| CDS-3UTR CAA 90 bp | GGTAGTATGATGATAGAACCCAGGGACCTCTGTGCACTAAGCAAGTGCTCATTGGAGCAGTCAGTCATCTaGACAGGTTCTGCGCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: GSMMIEPRDLCALSKCSLEQSVI*TGSALS Trigger: CGAGAGCGCAGAACCTGTCAAGATGACTGACTGCTC...CAATGAGCACTTGCTTAGTGCACAGAGGTCCCTGGGTTCTATCATCATACTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR CAA 90 bp | AGGCATCTTAATTCTTCCAACACCTTCCCTTTTCTGTGGGAACAGAAGGCAAAGGAGGGTCTTCCTTCTTaGGGTGTTCACAGGCCACAA | + |
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Preference number: 5 (lower is better) Translates to: RHLNSSNTFPFLWEQKAKEGLPS*GVHRPQ Trigger: TTGTGGCCTGTGAACACCCAAAGAAGGAAGACCCTC...CTTTGCCTTCTGTTCCCACAGAAAAGGGAAGGTGTTGGAAGAATTAAGATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS TCA 90 bp | CATGCAGAAAGGTGTTTATCTGTTTACAGTGTTGGGTATAATTGTTaGCACCGCGCATGGCTGTGTTGCATGGTTGACGACTTGTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: HAERCLSVYSVGYNC*HRAWLCCMVDDLSV Trigger: TACAGACAAGTCGTCAACCATGCAACACAGCCATGCGCGGTGTCAACAATTATACCCAACACTGTAAACAGATAAACACCTTTCTGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR CAA 90 bp | CCAACACCTTCCCTTTTCTGTGGGAACAGAAGGCAAAGTGGAATAAACTGTAAGTATCTGTTTACAGTGTaGGGTATAATTGTTGACACC | + |
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Preference number: 5 (lower is better) Translates to: PTPSLFCGNRRQSGINCKYLFTV*GIIVDT Trigger: GGTGTCAACAATTATACCCAACACTGTAAACAGATA...CTTACAGTTTATTCCACTTTGCCTTCTGTTCCCACAGAAAAGGGAAGGTGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR CAA 90 bp | TTAATTCTTCCAACACCTTCCCTTTTCTGTGGGAACAGAAGGCAAAGTGGAATAGCCACAATGAAGAACTaGTATTGCTTATCACTACTA | + |
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Preference number: 5 (lower is better) Translates to: LILPTPSLFCGNRRQSGIATMKN*YCLSLL Trigger: TAGTAGTGATAAGCAATACAAGTTCTTCATTGTGGC...TATTCCACTTTGCCTTCTGTTCCCACAGAAAAGGGAAGGTGTTGGAAGAATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS-3UTR CAA 90 bp | CAAAGTGGAATAAACTGTAAGAGAACCTGTATCAAACAGAAGAAAAGGCCTAGCGCCACAATGAAGAACTaGTATTGCTTATCACTACTA | + |
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Preference number: 5 (lower is better) Translates to: QSGINCKRTCIKQKKRPSATMKN*YCLSLL Trigger: TAGTAGTGATAAGCAATACAAGTTCTTCATTGTGGC...GCTAGGCCTTTTCTTCTGTTTGATACAGGTTCTCTTACAGTTTATTCCACTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS TCA 72 bp | GATAGGCTCCTCCAGTGTGTGAGCAGTCAGTCATCTTaGCAGGTTCTGCGCTCTCGTGGCAGTTCTTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: DRLLQCVSSQSS*QVLRSRGSSSD Trigger: GTCGGAAGAACTGCCACGAGAGCGCAGAACCTGTCAAGATGACTGACTGCTCACACACTGGAGGAGCCTATC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS TCA 72 bp | ACTATAGCGGCAGTTAGGATAGGCTCCTCCAGTGTGTaGGCAGTCAGTCATCTTGACAGGTTCTGCGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: TIAAVRIGSSSV*AVSHLDRFCAL Trigger: GAGAGCGCAGAACCTGTCAAGATGACTGACTGCTCACACACTGGAGGAGCCTATCCTAACTGCCGCTATAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS CAA 90 bp | ATCTTGACAGGTTCTGCGCTCTCGTGGCAGTTCTTCCGACCGTTCTaGCAGGTGATATTGTGCAAACTGCAGGTAGCAGCCACATTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ILTGSALSWQFFRPF*QVILCKLQVAATFW Trigger: CCAGAATGTGGCTGCTACCTGCAGTTTGCACAATATCACCTGCAAGAACGGTCGGAAGAACTGCCACGAGAGCGCAGAACCTGTCAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS CAA 90 bp | TCTGCGCTCTCGTGGCAGTTCTTCCGACCGTTCTTGCAGGTGATATaGTGCAAACTGCAGGTAGCAGCCACATTCTGGAAAGATTCATGC | + |
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Preference number: 6 (lower is better) Translates to: SALSWQFFRPFLQVI*CKLQVAATFWKDSC Trigger: GCATGAATCTTTCCAGAATGTGGCTGCTACCTGCAGTTTGCACAATATCACCTGCAAGAACGGTCGGAAGAACTGCCACGAGAGCGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS CAA 72 bp | TCGTGGCAGTTCTTCCGACCGTTCTTGCAGGTGATATaGTGCAAACTGCAGGTAGCAGCCACATTCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SWQFFRPFLQVI*CKLQVAATFWK Trigger: TTTCCAGAATGTGGCTGCTACCTGCAGTTTGCACAATATCACCTGCAAGAACGGTCGGAAGAACTGCCACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS GCA 72 bp | TGGCAGTTCTTCCGACCGTTCTTGCAGGTGATATTGTaGAAACTGCAGGTAGCAGCCACATTCTGGAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: WQFFRPFLQVIL*KLQVAATFWKD Trigger: ATCTTTCCAGAATGTGGCTGCTACCTGCAGTTTGCACAATATCACCTGCAAGAACGGTCGGAAGAACTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS CAA 90 bp | GTCTTCCTTCTTTGGGTGTTCACAGGCCACAATGAAGAACTTGTATaGCTTATCACTACTATAGCGGCAGTTAGGATAGGCTCCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: VFLLWVFTGHNEELV*LITTIAAVRIGSSS Trigger: ACTGGAGGAGCCTATCCTAACTGCCGCTATAGTAGTGATAAGCAATACAAGTTCTTCATTGTGGCCTGTGAACACCCAAAGAAGGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS TCA 72 bp | AGGTGTTTATCTGTTTACAGTGTTGGGTATAATTGTTaGCACCGCGCATGGCTGTGTTGCATGGTTGACGAC | + |
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Preference number: 6 (lower is better) Translates to: RCLSVYSVGYNC*HRAWLCCMVDD Trigger: GTCGTCAACCATGCAACACAGCCATGCGCGGTGTCAACAATTATACCCAACACTGTAAACAGATAAACACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS TCA 72 bp | GAGGGTCTTCCTTCTTTGGGTGTTCACAGGCCACAATaGAGAACTTGTATTGCTTATCACTACTATAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: EGLPSLGVHRPQ*RTCIAYHYYSG Trigger: GCCGCTATAGTAGTGATAAGCAATACAAGTTCTTCATTGTGGCCTGTGAACACCCAAAGAAGGAAGACCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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| CDS CAA 72 bp | CTTTGGGTGTTCACAGGCCACAATGAAGAACTTGTATaGCTTATCACTACTATAGCGGCAGTTAGGATAGGC | + |
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Preference number: 6 (lower is better) Translates to: LWVFTGHNEELV*LITTIAAVRIG Trigger: GCCTATCCTAACTGCCGCTATAGTAGTGATAAGCAATACAAGTTCTTCATTGTGGCCTGTGAACACCCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095923.4 ENSMUST00000226194.2 |
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