RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNASE2B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059606

Ensembl transcript IDs: ENSMUST00000075648.4

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp ACTACTATGATCTCGGCAGTAGCAGATGAGGGAAGGTACAAAGTGCTGGCACTGGGTGGGACGGTCCTTTaGAGTTCTGGGGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: TTMISAVADEGRYKVLALGGTVL*SSGVTG
Trigger: GCCTGTAACCCCAGAACTCCAAAGGACCGTCCCACC...CAGTGCCAGCACTTTGTACCTTCCCTCATCTGCTACTGCCGAGATCATAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS-3UTR CCA 90 bp CGCAGACAGAGGAATTCGTTCTTCACTACTATGATCTCGGCAGTAGCAGATGAGTGGATGTCAAACTTCTaGGAAGGGGTTGGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: RRQRNSFFTTMISAVADEWMSNF*EGVGRW
Trigger: CCAGCGACCAACCCCTTCCCAGAAGTTTGACATCCA...CTCATCTGCTACTGCCGAGATCATAGTAGTGAAGAACGAATTCCTCTGTCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS-3UTR TCA 90 bp CAGAGGAATTCGTTCTTCACTACTATGATCTCGGCAGTAGCAGATGAGGGAAGGGTCTTGGGTGGATTGTaGCACACACGGACAACATCA +
Preference number: 4 (lower is better)
Translates to: QRNSFFTTMISAVADEGRVLGGL*HTRTTS
Trigger: TGATGTTGTCCGTGTGTGTCACAATCCACCCAAGAC...CCTTCCCTCATCTGCTACTGCCGAGATCATAGTAGTGAAGAACGAATTCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS-3UTR CCA 90 bp GCAGCGCAGACAGAGGAATTCGTTCTTCACTACTATGATCTCGGCAGTAGCAGAGCAGGAGACAAAGTCTaGATTCAAGCAGCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: AAQTEEFVLHYYDLGSSRAGDKV*IQAASD
Trigger: GTCTGAAGCTGCTTGAATCCAGACTTTGTCTCCTGC...TCTGCTACTGCCGAGATCATAGTAGTGAAGAACGAATTCCTCTGTCTGCGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS-3UTR CCA 90 bp TTCACTACTATGATCTCGGCAGTAGCAGATGAGGGAAGGTACAAAGTGCTGGCAGGTCCTTTGGAGTTCTaGGGTTACAGGCAACTGTGT +
Preference number: 4 (lower is better)
Translates to: FTTMISAVADEGRYKVLAGPLEF*GYRQLC
Trigger: ACACAGTTGCCTGTAACCCCAGAACTCCAAAGGACC...TGCCAGCACTTTGTACCTTCCCTCATCTGCTACTGCCGAGATCATAGTAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS-3UTR GCA 90 bp TTCTTCACTACTATGATCTCGGCAGTAGCAGATGAGGGAAGGTACAAAGTGCTGGTTAACGACCCGCATTaGATCATCACATTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: FFTTMISAVADEGRYKVLVNDPH*IITFGR
Trigger: TCTCCCAAATGTGATGATGCAATGCGGGTCGTTAAC...CAGCACTTTGTACCTTCCCTCATCTGCTACTGCCGAGATCATAGTAGTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS-3UTR GCA 90 bp CAGAGGAATTCGTTCTTCACTACTATGATCTCGGCAGTAGCAGATGAGGGAAGGTGTGTAGGACTTCTTTaGTCCTGTTGTTTTGTATCT +
Preference number: 4 (lower is better)
Translates to: QRNSFFTTMISAVADEGRCVGLL*SCCFVS
Trigger: AGATACAAAACAACAGGAGCAAAGAAGTCCTACACA...CCTTCCCTCATCTGCTACTGCCGAGATCATAGTAGTGAAGAACGAATTCCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS-3UTR CAA 90 bp CAGCGCAGACAGAGGAATTCGTTCTTCACTACTATGATCTCGGCAGTAGCAGATACTTCTTTGCTCCTGTaGTTTTGTATCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: QRRQRNSFFTTMISAVADTSLLL*FCICSG
Trigger: CCCACTGCAGATACAAAACAACAGGAGCAAAGAAGT...ATCTGCTACTGCCGAGATCATAGTAGTGAAGAACGAATTCCTCTGTCTGCGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS-3UTR CAA 90 bp CGCAGACAGAGGAATTCGTTCTTCACTACTATGATCTCGGCAGTAGCAGATGAGCATTTTCCTGTATACTaGTTAACGACCCGCATTGCA +
Preference number: 5 (lower is better)
Translates to: RRQRNSFFTTMISAVADEHFPVY*LTTRIA
Trigger: TGCAATGCGGGTCGTTAACAAGTATACAGGAAAATG...CTCATCTGCTACTGCCGAGATCATAGTAGTGAAGAACGAATTCCTCTGTCTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS-3UTR CAA 90 bp AATTCGTTCTTCACTACTATGATCTCGGCAGTAGCAGATGAGGGAAGGTACAAACTGTGTAGGACTTCTTaGCTCCTGTTGTTTTGTATC +
Preference number: 5 (lower is better)
Translates to: NSFFTTMISAVADEGRYKLCRTS*LLLFCI
Trigger: GATACAAAACAACAGGAGCAAAGAAGTCCTACACAG...TTTGTACCTTCCCTCATCTGCTACTGCCGAGATCATAGTAGTGAAGAACGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS CCA 72 bp TGCTGGATGTCAAACTTCTGGGAAGGGGTTGGTCGCTaGCATGAGACAAGCGTTAGGACAAGTCCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: CWMSNFWEGVGR*HETSVRTSPSS
Trigger: GCTGCTGGGACTTGTCCTAACGCTTGTCTCATGCCAGCGACCAACCCCTTCCCAGAAGTTTGACATCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS CCA 72 bp GTGAACCGGAACTACTGGATAGGTGGGACGGTCCTTTaGAGTTCTGGGGTTACAGGCAACTGTGTAGGACTT +
Preference number: 6 (lower is better)
Translates to: VNRNYWIGGTVL*SSGVTGNCVGL
Trigger: AAGTCCTACACAGTTGCCTGTAACCCCAGAACTCCAAAGGACCGTCCCACCTATCCAGTAGTTCCGGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS CAA 72 bp AGTGAACCGGAACTACTGGATAGGTGGGACGGTCCTTaGGAGTTCTGGGGTTACAGGCAACTGTGTAGGACT +
Preference number: 6 (lower is better)
Translates to: SEPELLDRWDGP*EFWGYRQLCRT
Trigger: AGTCCTACACAGTTGCCTGTAACCCCAGAACTCCAAAGGACCGTCCCACCTATCCAGTAGTTCCGGTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS CCA 72 bp GAACTACTGGATAGGTGGGACGGTCCTTTGGAGTTCTaGGGTTACAGGCAACTGTGTAGGACTTCTTTGCTC +
Preference number: 6 (lower is better)
Translates to: ELLDRWDGPLEF*GYRQLCRTSLL
Trigger: GAGCAAAGAAGTCCTACACAGTTGCCTGTAACCCCAGAACTCCAAAGGACCGTCCCACCTATCCAGTAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS CAA 72 bp TATAGATATGCTGGATGTCAAACTTCTGGGAAGGGGTaGGTCGCTGGCATGAGACAAGCGTTAGGACAAGTC +
Preference number: 6 (lower is better)
Translates to: YRYAGCQTSGKG*VAGMRQALGQV
Trigger: GACTTGTCCTAACGCTTGTCTCATGCCAGCGACCAACCCCTTCCCAGAAGTTTGACATCCAGCATATCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS CCA 72 bp CATGACAATTTGGACTTGTCCCGTCTTTGCAAGTCTTaGGTGGATTGTGACACACACGGACAACATCAGCAA +
Preference number: 6 (lower is better)
Translates to: HDNLDLSRLCKS*VDCDTHGQHQQ
Trigger: TTGCTGATGTTGTCCGTGTGTGTCACAATCCACCCAAGACTTGCAAAGACGGGACAAGTCCAAATTGTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS CCA 72 bp ACAATTTGGACTTGTCCCGTCTTTGCAAGTCTTGGGTaGATTGTGACACACACGGACAACATCAGCAAAAGT +
Preference number: 6 (lower is better)
Translates to: TIWTCPVFASLG*IVTHTDNISKS
Trigger: ACTTTTGCTGATGTTGTCCGTGTGTGTCACAATCCACCCAAGACTTGCAAAGACGGGACAAGTCCAAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS CAA 72 bp GGTTACAGGCAACTGTGTAGGACTTCTTTGCTCCTGTaGTTTTGTATCTGCAGTGGGTATAATTCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: GYRQLCRTSLLL*FCICSGYNSLP
Trigger: GGGCAAGGAATTATACCCACTGCAGATACAAAACAACAGGAGCAAAGAAGTCCTACACAGTTGCCTGTAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS GCA 72 bp AGTTCTGGGGTTACAGGCAACTGTGTAGGACTTCTTTaGTCCTGTTGTTTTGTATCTGCAGTGGGTATAATT +
Preference number: 6 (lower is better)
Translates to: SSGVTGNCVGLL*SCCFVSAVGII
Trigger: AATTATACCCACTGCAGATACAAAACAACAGGAGCAAAGAAGTCCTACACAGTTGCCTGTAACCCCAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4
CDS CAA 72 bp AGAAAAGTATTCAAGTCCTTACATTTTCCTGTATACTaGTTAACGACCCGCATTGCATCATCACATTTGGGA +
Preference number: 6 (lower is better)
Translates to: RKVFKSLHFPVY*LTTRIASSHLG
Trigger: TCCCAAATGTGATGATGCAATGCGGGTCGTTAACAAGTATACAGGAAAATGTAAGGACTTGAATACTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075648.4