RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNASE2A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047222

Ensembl transcript IDs: ENSMUST00000061936.8

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp GCTGACATGCAGTGCAAACAGAGGACTCGGTTCTTCCCAACTATGATCTTGGCATACATGGGACTGTCCTaGGGAGTTCTGGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: ADMQCKQRTRFFPTMILAYMGLS*GVLGSQ
Trigger: CTGTGACCCCAGAACTCCTCAGGACAGTCCCATGTA...TGCCAAGATCATAGTTGGGAAGAACCGAGTCCTCTGTTTGCACTGCATGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS-3UTR TCA 90 bp GCTGACATGCAGTGCAAACAGAGGACTCGGTTCTTCCCAACTATGATCTTGGCAAATATCCCATCCAAGTaGACTGGAACCACTGGATAC +
Preference number: 4 (lower is better)
Translates to: ADMQCKQRTRFFPTMILANIPSK*TGTTGY
Trigger: GTATCCAGTGGTTCCAGTTCACTTGGATGGGATATT...TGCCAAGATCATAGTTGGGAAGAACCGAGTCCTCTGTTTGCACTGCATGTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS-3UTR TCA 90 bp CATGCAGTGCAAACAGAGGACTCGGTTCTTCCCAACTATGATCTTGGCAGTAGCTGTGTAGTACTTCATTaGTCTTGTTGTTCGGTATCT +
Preference number: 4 (lower is better)
Translates to: HAVQTEDSVLPNYDLGSSCVVLH*SCCSVS
Trigger: AGATACCGAACAACAAGATCAATGAAGTACTACACA...GCTACTGCCAAGATCATAGTTGGGAAGAACCGAGTCCTCTGTTTGCACTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS-3UTR GCA 90 bp ACTTTTTGTTCAGCTAAATTAAAGGGAGTCAGCAACAGGTTTCATGAGGACAGATTGTTGTTCGGTATCTaGAGTTGGAATAATGACTGG +
Preference number: 4 (lower is better)
Translates to: TFCSAKLKGVSNRFHEDRLLFGI*SWNNDW
Trigger: CCAGTCATTATTCCAACTGCAGATACCGAACAACAA...TCTGTCCTCATGAAACCTGTTGCTGACTCCCTTTAATTTAGCTGAACAAAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS-3UTR CAA 90 bp ACTTTTTGTTCAGCTAAATTAAAGGGAGTCAGCAACAGGTTTCATGAGGACAGACTGTGTAGTACTTCATaGATCTTGTTGTTCGGTATC +
Preference number: 5 (lower is better)
Translates to: TFCSAKLKGVSNRFHEDRLCSTS*ILLFGI
Trigger: GATACCGAACAACAAGATCAATGAAGTACTACACAG...TCTGTCCTCATGAAACCTGTTGCTGACTCCCTTTAATTTAGCTGAACAAAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS TCA 90 bp ACTGGCCGGAGTTGTGAGTATACAGATAGTTACTTGTACCCGATTTaGACTATCATGACAATTTCTACTTATCCCATTTTTGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: TGRSCEYTDSYLYPI*TIMTISTYPIFADL
Trigger: AAGATCTGCAAAAATGGGATAAGTAGAAATTGTCATGATAGTTCAAATCGGGTACAAGTAACTATCTGTATACTCACAACTCCGGCCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS CCA 90 bp ACTATCATGACAATTTCTACTTATCCCATTTTTGCAGATCTTACGTaGATTATGACACACACGGACAACATTAGCAAAAGTTGTATGAAG +
Preference number: 5 (lower is better)
Translates to: TIMTISTYPIFADLT*IMTHTDNISKSCMK
Trigger: CTTCATACAACTTTTGCTAATGTTGTCCGTGTGTGTCATAATCCACGTAAGATCTGCAAAAATGGGATAAGTAGAAATTGTCATGATAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS CCA 72 bp TGCTGGATGTCAAACCACCGGGAGGGGGTCAATGGCTaGCATGAGGCAAGCATTAGGACATGTCCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: CWMSNHREGVNG*HEASIRTCPSS
Trigger: GCTGCTGGGACATGTCCTAATGCTTGCCTCATGCCAGCCATTGACCCCCTCCCGGTGGTTTGACATCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS CCA 72 bp GAACCACTGGATACATGGGACTGTCCTGAGGAGTTCTaGGGTCACAGGCAACTGTGTAGTACTTCATTGATC +
Preference number: 6 (lower is better)
Translates to: EPLDTWDCPEEF*GHRQLCSTSLI
Trigger: GATCAATGAAGTACTACACAGTTGCCTGTGACCCCAGAACTCCTCAGGACAGTCCCATGTATCCAGTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS CAA 90 bp GAGGAGTTCTGGGGTCACAGGCAACTGTGTAGTACTTCATTGATCTaGTTGTTCGGTATCTGCAGTTGGAATAATGACTGGCCGGAGTTG +
Preference number: 6 (lower is better)
Translates to: EEFWGHRQLCSTSLI*LFGICSWNNDWPEL
Trigger: CAACTCCGGCCAGTCATTATTCCAACTGCAGATACCGAACAACAAGATCAATGAAGTACTACACAGTTGCCTGTGACCCCAGAACTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS CAA 72 bp GGTCACAGGCAACTGTGTAGTACTTCATTGATCTTGTaGTTCGGTATCTGCAGTTGGAATAATGACTGGCCG +
Preference number: 6 (lower is better)
Translates to: GHRQLCSTSLIL*FGICSWNNDWP
Trigger: CGGCCAGTCATTATTCCAACTGCAGATACCGAACAACAAGATCAATGAAGTACTACACAGTTGCCTGTGACC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS CAA 72 bp TGGGGTCACAGGCAACTGTGTAGTACTTCATTGATCTaGTTGTTCGGTATCTGCAGTTGGAATAATGACTGG +
Preference number: 6 (lower is better)
Translates to: WGHRQLCSTSLI*LFGICSWNNDW
Trigger: CCAGTCATTATTCCAACTGCAGATACCGAACAACAAGATCAATGAAGTACTACACAGTTGCCTGTGACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS CAA 72 bp GAGTTCTGGGGTCACAGGCAACTGTGTAGTACTTCATaGATCTTGTTGTTCGGTATCTGCAGTTGGAATAAT +
Preference number: 6 (lower is better)
Translates to: EFWGHRQLCSTS*ILLFGICSWNN
Trigger: ATTATTCCAACTGCAGATACCGAACAACAAGATCAATGAAGTACTACACAGTTGCCTGTGACCCCAGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS GCA 72 bp TTGAACTATCATGACAATTTCTACTTATCCCATTTTTaGAGATCTTACGTGGATTATGACACACACGGACAA +
Preference number: 6 (lower is better)
Translates to: LNYHDNFYLSHF*RSYVDYDTHGQ
Trigger: TTGTCCGTGTGTGTCATAATCCACGTAAGATCTGCAAAAATGGGATAAGTAGAAATTGTCATGATAGTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8
CDS CCA 72 bp ACAATTTCTACTTATCCCATTTTTGCAGATCTTACGTaGATTATGACACACACGGACAACATTAGCAAAAGT +
Preference number: 6 (lower is better)
Translates to: TISTYPIFADLT*IMTHTDNISKS
Trigger: ACTTTTGCTAATGTTGTCCGTGTGTGTCATAATCCACGTAAGATCTGCAAAAATGGGATAAGTAGAAATTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061936.8