Pregenerated sensors for RNASE12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068407Ensembl transcript IDs: ENSMUST00000089798.3, ENSMUST00000227764.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGATGGAGGCCTCTCGTGGATaGAGACATGCACCTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VNQSGSGTDKKSSHSVLMEASRG*RHAPFC Trigger: GCAGAAAGGTGCATGTCTTCATCCACGAGAGGCCTC...CATCAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CCA 90 bp | CAGGTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGACCTTTCTGCATCTGTaGTCGGGTTCCCTGATGACC | + |
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Preference number: 4 (lower is better) Translates to: QVNQSGSGTDKKSSHSVLTFLHL*SGSLMT Trigger: GGTCATCAGGGAACCCGACCACAGATGCAGAAAGGT...CAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR GCA 90 bp | AACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGATGGCATCGTGGATGAAGACATaGACCTTTCTGCATCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: NQSGSGTDKKSSHSVLMASWMKT*TFLHLW Trigger: CCACAGATGCAGAAAGGTGCATGTCTTCATCCACGA...TGCCATCAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CCA 90 bp | AACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGATGGCAGGCACGACATCTTCTTaGAGGAAGTGCAAACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: NQSGSGTDKKSSHSVLMAGTTSS*RKCKLC Trigger: ACAGAGTTTGCACTTCCTCCAAGAAGATGTCGTGCC...TGCCATCAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CCA 90 bp | CAGGTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGGGCACGACATCTTCTTaGAGGAAGTGCAAACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: QVNQSGSGTDKKSSHSVLGTTSS*RKCKLC Trigger: ACAGAGTTTGCACTTCCTCCAAGAAGATGTCGTGCC...CAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR GCA 90 bp | CAGGTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGGGAGAATCATGTAGTTaGAGTACCTCAGAGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: QVNQSGSGTDKKSSHSVLGESCS*STSEEQ Trigger: CTGTTCCTCTGAGGTACTGCAACTACATGATTCTCC...CAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CCA 90 bp | AACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGATGGCATATTCCACATATCCCTaGAGATCAACTGGCCCTAAG | + |
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Preference number: 4 (lower is better) Translates to: NQSGSGTDKKSSHSVLMAYSTYP*RSTGPK Trigger: CTTAGGGCCAGTTGATCTCCAGGGATATGTGGAATA...TGCCATCAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CCA 90 bp | CAGGTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGTATTCCACATATCCCTaGAGATCAACTGGCCCTAAG | + |
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Preference number: 4 (lower is better) Translates to: QVNQSGSGTDKKSSHSVLYSTYP*RSTGPK Trigger: CTTAGGGCCAGTTGATCTCCAGGGATATGTGGAATA...CAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR TCA 90 bp | CAGGTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGGACAAACTGTCATCCTaGATTTTGTCTCACTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: QVNQSGSGTDKKSSHSVLDKLSS*ILSHSG Trigger: TCCAGAGTGAGACAAAATTCAGGATGACAGTTTGTC...CAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR TCA 90 bp | GTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGATGGACAAACTGTCATCCTaGATTTTGTCTCACTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VNQSGSGTDKKSSHSVLMDKLSS*ILSHSG Trigger: TCCAGAGTGAGACAAAATTCAGGATGACAGTTTGTC...CATCAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CCA 90 bp | CAGGTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGCATGCAATTGTTCTATaGACGTCAGCACAACATCTT | + |
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Preference number: 4 (lower is better) Translates to: QVNQSGSGTDKKSSHSVLHAIVL*TSAQHL Trigger: AAGATGTTGTGCTGACGTCCATAGAACAATTGCATG...CAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CCA 90 bp | AACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGATGGCACATGCAATTGTTCTATaGACGTCAGCACAACATCTT | + |
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Preference number: 4 (lower is better) Translates to: NQSGSGTDKKSSHSVLMAHAIVL*TSAQHL Trigger: AAGATGTTGTGCTGACGTCCATAGAACAATTGCATG...TGCCATCAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CCA 90 bp | CAGGTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGTTTATGGGAGAAATTTaGTACCTGCAGGCAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: QVNQSGSGTDKKSSHSVLFMGEI*YLQAGY Trigger: ATATCCTGCCTGCAGGTACCAAATTTCTCCCATAAA...CAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CCA 90 bp | AACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGATGGCATTTATGGGAGAAATTTaGTACCTGCAGGCAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: NQSGSGTDKKSSHSVLMAFMGEI*YLQAGY Trigger: ATATCCTGCCTGCAGGTACCAAATTTCTCCCATAAA...TGCCATCAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CCA 90 bp | GTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGATGGAACAAACCCCTTTATaGGAGAAATTTGGTACCTGC | + |
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Preference number: 4 (lower is better) Translates to: VNQSGSGTDKKSSHSVLMEQTPL*EKFGTC Trigger: GCAGGTACCAAATTTCTCCCATAAAGGGGTTTGTTC...CATCAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CCA 90 bp | CAGGTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGAATTTTGTCTCACTCTaGAAGCAGAAAAGGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: QVNQSGSGTDKKSSHSVLNFVSL*KQKRSE Trigger: TTCTGACCTTTTCTGCTTCCAGAGTGAGACAAAATT...CAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CCA 90 bp | GTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGATGAATTTTGTCTCACTCTaGAAGCAGAAAAGGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VNQSGSGTDKKSSHSVLMNFVSL*KQKRSE Trigger: TTCTGACCTTTTCTGCTTCCAGAGTGAGACAAAATT...CATCAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CAA 90 bp | CAGGTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGGGGCACGACATCTTCTaGGAGGAAGTGCAAACTCTG | + |
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Preference number: 5 (lower is better) Translates to: QVNQSGSGTDKKSSHSVLGHDIF*EEVQTL Trigger: CAGAGTTTGCACTTCCTCCAAGAAGATGTCGTGCCC...CAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CAA 90 bp | GTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGATGGGGCACGACATCTTCTaGGAGGAAGTGCAAACTCTG | + |
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Preference number: 5 (lower is better) Translates to: VNQSGSGTDKKSSHSVLMGHDIF*EEVQTL Trigger: CAGAGTTTGCACTTCCTCCAAGAAGATGTCGTGCCC...CATCAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS TCA 90 bp | GGGCACGACATCTTCTTGGAGGAAGTGCAAACTCTGTTGATCTTCTaGGGCCTCTCGTGGATGAAGACATGCACCTTTCTGCATCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: GHDIFLEEVQTLLIF*GLSWMKTCTFLHLW Trigger: CCACAGATGCAGAAAGGTGCATGTCTTCATCCACGAGAGGCCTCAGAAGATCAACAGAGTTTGCACTTCCTCCAAGAAGATGTCGTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CAA 90 bp | CAGGTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGAAAGGTCAGAATCATTaGGGCACGACATCTTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: QVNQSGSGTDKKSSHSVLKGQNH*GTTSSW Trigger: CCAAGAAGATGTCGTGCCCAAATGATTCTGACCTTT...CAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CAA 90 bp | CAGGTTAACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGCTTTATGGGAGAAATTaGGTACCTGCAGGCAGGATA | + |
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Preference number: 5 (lower is better) Translates to: QVNQSGSGTDKKSSHSVLLYGRN*VPAGRI Trigger: TATCCTGCCTGCAGGTACCAAATTTCTCCCATAAAG...CAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTTAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS-3UTR CAA 90 bp | AACCAGAGCGGCTCGGGGACAGATAAGAAGTCCTCACACTCAGTGCTGATGGCACTTTATGGGAGAAATTaGGTACCTGCAGGCAGGATA | + |
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Preference number: 5 (lower is better) Translates to: NQSGSGTDKKSSHSVLMALYGRN*VPAGRI Trigger: TATCCTGCCTGCAGGTACCAAATTTCTCCCATAAAG...TGCCATCAGCACTGAGTGTGAGGACTTCTTATCTGTCCCCGAGCCGCTCTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS TCA 90 bp | AGTCCACATGCAATTGTTCTATGGACGTCAGCACAACATCTTCAGTaGGCTCATTCTCCCAGAACAGAAGCAGCAAGAAAACAACCACCA | + |
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Preference number: 5 (lower is better) Translates to: SPHAIVLWTSAQHLQ*AHSPRTEAARKQPP Trigger: TGGTGGTTGTTTTCTTGCTGCTTCTGTTCTGGGAGAATGAGCTCACTGAAGATGTTGTGCTGACGTCCATAGAACAATTGCATGTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS TCA 90 bp | GAAATTTGGTACCTGCAGGCAGGATATGTGGTGCCATCAATGAGCTaGCAAACTGTCATCCTGAATTTTGTCTCACTCTGGAAGCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: EIWYLQAGYVVPSMS*QTVILNFVSLWKQK Trigger: TTTCTGCTTCCAGAGTGAGACAAAATTCAGGATGACAGTTTGTCAGCTCATTGATGGCACCACATATCCTGCCTGCAGGTACCAAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS CAA 90 bp | GCAGTACCTCAGAGGAACAGCATTCTGAGGATAGTCCACATGCAATaGTTCTATGGACGTCAGCACAACATCTTCAGTGAGCTCATTCTC | + |
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Preference number: 6 (lower is better) Translates to: AVPQRNSILRIVHMQ*FYGRQHNIFSELIL Trigger: GAGAATGAGCTCACTGAAGATGTTGTGCTGACGTCCATAGAACAATTGCATGTGGACTATCCTCAGAATGCTGTTCCTCTGAGGTACTGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS TCA 72 bp | ATCTTCTTGGAGGAAGTGCAAACTCTGTTGATCTTCTaGGGCCTCTCGTGGATGAAGACATGCACCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: IFLEEVQTLLIF*GLSWMKTCTFL Trigger: CAGAAAGGTGCATGTCTTCATCCACGAGAGGCCTCAGAAGATCAACAGAGTTTGCACTTCCTCCAAGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS TCA 72 bp | TACCTGCAGGCAGGATATGTGGTGCCATCAATGAGCTaGCAAACTGTCATCCTGAATTTTGTCTCACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: YLQAGYVVPSMS*QTVILNFVSLW Trigger: CCAGAGTGAGACAAAATTCAGGATGACAGTTTGTCAGCTCATTGATGGCACCACATATCCTGCCTGCAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS CAA 72 bp | CAGAGGAACAGCATTCTGAGGATAGTCCACATGCAATaGTTCTATGGACGTCAGCACAACATCTTCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: QRNSILRIVHMQ*FYGRQHNIFSE Trigger: CTCACTGAAGATGTTGTGCTGACGTCCATAGAACAATTGCATGTGGACTATCCTCAGAATGCTGTTCCTCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS CAA 72 bp | TTGTCTCACTCTGGAAGCAGAAAAGGTCAGAATCATTaGGGCACGACATCTTCTTGGAGGAAGTGCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: LSHSGSRKGQNH*GTTSSWRKCKL Trigger: GAGTTTGCACTTCCTCCAAGAAGATGTCGTGCCCAAATGATTCTGACCTTTTCTGCTTCCAGAGTGAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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| CDS TCA 72 bp | GCAATTGTTCTATGGACGTCAGCACAACATCTTCAGTaGGCTCATTCTCCCAGAACAGAAGCAGCAAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: AIVLWTSAQHLQ*AHSPRTEAARK Trigger: TTTTCTTGCTGCTTCTGTTCTGGGAGAATGAGCTCACTGAAGATGTTGTGCTGACGTCCATAGAACAATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089798.3 ENSMUST00000227764.2 |
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