RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNASE11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059648

Ensembl transcript IDs: ENSMUST00000076106.4

Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAATGGCCTTGGGAATTCTaGGGCTCACATCCATGGAGC +
Preference number: 4 (lower is better)
Translates to: GRRREATMTLNLSFFSPKWPWEF*GSHPWS
Trigger: GCTCCATGGATGTGAGCCTCAGAATTCCCAAGGCCA...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR CCA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAAGCTCCCACTGCTGCTTaGCTTGGGTGTTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: GRRREATMTLNLSFFSPKAPTAA*LGCLFT
Trigger: TGTGAACAAACACCCAAGCCAAGCAGCAGTGGGAGC...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR TCA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAAAAGTCATTGCCCAACTaGCAGGATGCATTCCCGTCT +
Preference number: 4 (lower is better)
Translates to: GRRREATMTLNLSFFSPKKSLPN*QDAFPS
Trigger: AGACGGGAATGCATCCTGTCAGTTGGGCAATGACTT...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR GCA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAAAGCTCATCAGAGAATTaGTGGCCAGCACTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GRRREATMTLNLSFFSPKSSSEN*WPALSG
Trigger: TCCTGACAGTGCTGGCCAGCAATTCTCTGATGAGCT...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR CCA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAACACTGCTGCTTGGCTTaGGTGTTTGTTCACACTTCC +
Preference number: 4 (lower is better)
Translates to: GRRREATMTLNLSFFSPKHCCLA*VFVHTS
Trigger: GGAAGTGTGAACAAACACCCAAGCCAAGCAGCAGTG...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR TCA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAACTTCATTCTGCTTTCTaGAGGCTTTGCAAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GRRREATMTLNLSFFSPKLHSAF*RLCKKQ
Trigger: CTGCTTCTTGCAAAGCCTTCAGAAAGCAGAATGAAG...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR TCA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAATTGCATCTCTTCCTGTaGAAATTGTTCTGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GRRREATMTLNLSFFSPKLHLFL*KLFCGP
Trigger: GGGACCACAGAACAATTTTCACAGGAAGAGATGCAA...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR TCA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAATTTTCTTTAATGAGGTaGTGCTGTGCTCATGGGACC +
Preference number: 4 (lower is better)
Translates to: GRRREATMTLNLSFFSPKFSLMR*CCAHGT
Trigger: GGTCCCATGAGCACAGCATCACCTCATTAAAGAAAA...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR GCA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAATGGTCCCCTTCATTCTaGTTTCTGAAGGCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: GRRREATMTLNLSFFSPKWSPSF*FLKALQ
Trigger: TTGCAAAGCCTTCAGAAAGCAGAATGAAGGGGACCA...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR CCA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAATCATCAGAGAATTGCTaGCCAGCACTGTCAGGATTT +
Preference number: 4 (lower is better)
Translates to: GRRREATMTLNLSFFSPKSSENC*PALSGF
Trigger: AAATCCTGACAGTGCTGGCCAGCAATTCTCTGATGA...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR GCA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAATGTTTTGCAGCAGGTTaGATCTCTTCCTGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: GRRREATMTLNLSFFSPKCFAAG*ISSCEN
Trigger: ATTTTCACAGGAAGAGATGCAACCTGCTGCAAAACA...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CCA 90 bp GCCAGCACTGTCAGGATTTTCTTTAATGAGGTGATGCTGTGCTCATaGGACCTGAGGCACTGGTGGCCTGCAAGGACCTTGCACGTGGTA +
Preference number: 5 (lower is better)
Translates to: ASTVRIFFNEVMLCS*DLRHWWPARTLHVV
Trigger: TACCACGTGCAAGGTCCTTGCAGGCCACCAGTGCCTCAGGTCCCATGAGCACAGCATCACCTCATTAAAGAAAATCCTGACAGTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR CAA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAAGCTTGGCTTGGGTGTTaGTTCACACTTCCCTCGGGT +
Preference number: 5 (lower is better)
Translates to: GRRREATMTLNLSFFSPKAWLGC*FTLPSG
Trigger: ACCCGAGGGAAGTGTGAACAAACACCCAAGCCAAGC...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR CAA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAACAGCTCATCAGAGAATaGCTGGCCAGCACTGTCAGG +
Preference number: 5 (lower is better)
Translates to: GRRREATMTLNLSFFSPKQLIRE*LASTVR
Trigger: CCTGACAGTGCTGGCCAGCAATTCTCTGATGAGCTG...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS GCA 90 bp GTTGCATCTCTTCCTGTGAAAATTGTTCTGTGGTCCCCTTCATTCTaGTTTCTGAAGGCTTTGCAAGAAGCAGTCCAAGGGCGAGCAACA +
Preference number: 5 (lower is better)
Translates to: VASLPVKIVLWSPSF*FLKALQEAVQGRAT
Trigger: TGTTGCTCGCCCTTGGACTGCTTCTTGCAAAGCCTTCAGAAAGCAGAATGAAGGGGACCACAGAACAATTTTCACAGGAAGAGATGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR CAA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAACCACTGCTGCTTGGCTaGGGTGTTTGTTCACACTTC +
Preference number: 5 (lower is better)
Translates to: GRRREATMTLNLSFFSPKPLLLG*GVCSHF
Trigger: GAAGTGTGAACAAACACCCAAGCCAAGCAGCAGTGG...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR CAA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAATGCTTTCTGAAGGCTTaGCAAGAAGCAGTCCAAGGG +
Preference number: 5 (lower is better)
Translates to: GRRREATMTLNLSFFSPKCFLKA*QEAVQG
Trigger: CCCTTGGACTGCTTCTTGCAAAGCCTTCAGAAAGCA...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR CAA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAAGCAGACATCACATGTTaGGATATGCTGAGGCCAGTA +
Preference number: 5 (lower is better)
Translates to: GRRREATMTLNLSFFSPKADITC*DMLRPV
Trigger: TACTGGCCTCAGCATATCCAAACATGTGATGTCTGC...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS-3UTR CAA 90 bp GGCAGAAGGAGAGAAGCAACAATGACCTTGAACTTGTCCTTCTTTAGTCCCAAACTCATAGTATTTCCCTaGGGGATAATAAAAGATAGC +
Preference number: 5 (lower is better)
Translates to: GRRREATMTLNLSFFSPKLIVFP*GIIKDS
Trigger: GCTATCTTTTATTATCCCCAAGGGAAATACTATGAG...TTTGGGACTAAAGAAGGACAAGTTCAAGGTCATTGTTGCTTCTCTCCTTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CAA 90 bp ATGCTGTGCTCATGGGACCTGAGGCACTGGTGGCCTGCAAGGACCTaGCACGTGGTACGCTCCAGTCCTAGGCTCCCACTGCTGCTTGGC +
Preference number: 6 (lower is better)
Translates to: MLCSWDLRHWWPART*HVVRSSPRLPLLLG
Trigger: GCCAAGCAGCAGTGGGAGCCTAGGACTGGAGCGTACCACGTGCAAGGTCCTTGCAGGCCACCAGTGCCTCAGGTCCCATGAGCACAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CCA 72 bp GAGGTGATGCTGTGCTCATGGGACCTGAGGCACTGGTaGCCTGCAAGGACCTTGCACGTGGTACGCTCCAGT +
Preference number: 6 (lower is better)
Translates to: EVMLCSWDLRHW*PARTLHVVRSS
Trigger: ACTGGAGCGTACCACGTGCAAGGTCCTTGCAGGCCACCAGTGCCTCAGGTCCCATGAGCACAGCATCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS GCA 72 bp TGCACGTGGTACGCTCCAGTCCTAGGCTCCCACTGCTaGTTGGCTTGGGTGTTTGTTCACACTTCCCTCGGG +
Preference number: 6 (lower is better)
Translates to: CTWYAPVLGSHC*LAWVFVHTSLG
Trigger: CCCGAGGGAAGTGTGAACAAACACCCAAGCCAAGCAGCAGTGGGAGCCTAGGACTGGAGCGTACCACGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CCA 72 bp TACGCTCCAGTCCTAGGCTCCCACTGCTGCTTGGCTTaGGTGTTTGTTCACACTTCCCTCGGGTGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: YAPVLGSHCCLA*VFVHTSLGWPW
Trigger: CCAAGGCCACCCGAGGGAAGTGTGAACAAACACCCAAGCCAAGCAGCAGTGGGAGCCTAGGACTGGAGCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CCA 72 bp AATGAGGTGATGCTGTGCTCATGGGACCTGAGGCACTaGTGGCCTGCAAGGACCTTGCACGTGGTACGCTCC +
Preference number: 6 (lower is better)
Translates to: NEVMLCSWDLRH*WPARTLHVVRS
Trigger: GGAGCGTACCACGTGCAAGGTCCTTGCAGGCCACCAGTGCCTCAGGTCCCATGAGCACAGCATCACCTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CAA 72 bp ACGTGGTACGCTCCAGTCCTAGGCTCCCACTGCTGCTaGGCTTGGGTGTTTGTTCACACTTCCCTCGGGTGG +
Preference number: 6 (lower is better)
Translates to: TWYAPVLGSHCC*AWVFVHTSLGW
Trigger: CCACCCGAGGGAAGTGTGAACAAACACCCAAGCCAAGCAGCAGTGGGAGCCTAGGACTGGAGCGTACCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CAA 90 bp TTGCACGTGGTACGCTCCAGTCCTAGGCTCCCACTGCTGCTTGGCTaGGGTGTTTGTTCACACTTCCCTCGGGTGGCCTTGGGAATTCTG +
Preference number: 6 (lower is better)
Translates to: LHVVRSSPRLPLLLG*GVCSHFPRVALGIL
Trigger: CAGAATTCCCAAGGCCACCCGAGGGAAGTGTGAACAAACACCCAAGCCAAGCAGCAGTGGGAGCCTAGGACTGGAGCGTACCACGTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS GCA 72 bp CCTTGCACGTGGTACGCTCCAGTCCTAGGCTCCCACTaGTGCTTGGCTTGGGTGTTTGTTCACACTTCCCTC +
Preference number: 6 (lower is better)
Translates to: PCTWYAPVLGSH*CLAWVFVHTSL
Trigger: GAGGGAAGTGTGAACAAACACCCAAGCCAAGCAGCAGTGGGAGCCTAGGACTGGAGCGTACCACGTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS GCA 72 bp AGCACTGTCAGGATTTTCTTTAATGAGGTGATGCTGTaGTCATGGGACCTGAGGCACTGGTGGCCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: STVRIFFNEVML*SWDLRHWWPAR
Trigger: CCTTGCAGGCCACCAGTGCCTCAGGTCCCATGAGCACAGCATCACCTCATTAAAGAAAATCCTGACAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CCA 72 bp GTCAGGATTTTCTTTAATGAGGTGATGCTGTGCTCATaGGACCTGAGGCACTGGTGGCCTGCAAGGACCTTG +
Preference number: 6 (lower is better)
Translates to: VRIFFNEVMLCS*DLRHWWPARTL
Trigger: CAAGGTCCTTGCAGGCCACCAGTGCCTCAGGTCCCATGAGCACAGCATCACCTCATTAAAGAAAATCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CAA 90 bp CTGCTGCTTGGCTTGGGTGTTTGTTCACACTTCCCTCGGGTGGCCTaGGGAATTCTGAGGCTCACATCCATGGAGCCATGTATAAAGTCA +
Preference number: 6 (lower is better)
Translates to: LLLGLGVCSHFPRVA*GILRLTSMEPCIKS
Trigger: TGACTTTATACATGGCTCCATGGATGTGAGCCTCAGAATTCCCAAGGCCACCCGAGGGAAGTGTGAACAAACACCCAAGCCAAGCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CAA 72 bp GTTCTGTGGTCCCCTTCATTCTGCTTTCTGAAGGCTTaGCAAGAAGCAGTCCAAGGGCGAGCAACAGCAGAA +
Preference number: 6 (lower is better)
Translates to: VLWSPSFCFLKA*QEAVQGRATAE
Trigger: TTCTGCTGTTGCTCGCCCTTGGACTGCTTCTTGCAAAGCCTTCAGAAAGCAGAATGAAGGGGACCACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CAA 90 bp GTGAAAATTGTTCTGTGGTCCCCTTCATTCTGCTTTCTGAAGGCTTaGCAAGAAGCAGTCCAAGGGCGAGCAACAGCAGAAAGACTGCCA +
Preference number: 6 (lower is better)
Translates to: VKIVLWSPSFCFLKA*QEAVQGRATAERLP
Trigger: TGGCAGTCTTTCTGCTGTTGCTCGCCCTTGGACTGCTTCTTGCAAAGCCTTCAGAAAGCAGAATGAAGGGGACCACAGAACAATTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CAA 72 bp CTTCTGGGTGTTAGGGGTGTGGCAGACATCACATGTTaGGATATGCTGAGGCCAGTATTTTTGTCTGACAGG +
Preference number: 6 (lower is better)
Translates to: LLGVRGVADITC*DMLRPVFLSDR
Trigger: CCTGTCAGACAAAAATACTGGCCTCAGCATATCCAAACATGTGATGTCTGCCACACCCCTAACACCCAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS GCA 72 bp CTTCCTGTGAAAATTGTTCTGTGGTCCCCTTCATTCTaGTTTCTGAAGGCTTTGCAAGAAGCAGTCCAAGGG +
Preference number: 6 (lower is better)
Translates to: LPVKIVLWSPSF*FLKALQEAVQG
Trigger: CCCTTGGACTGCTTCTTGCAAAGCCTTCAGAAAGCAGAATGAAGGGGACCACAGAACAATTTTCACAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CCA 72 bp CAGCAGGTTGCATCTCTTCCTGTGAAAATTGTTCTGTaGTCCCCTTCATTCTGCTTTCTGAAGGCTTTGCAA +
Preference number: 6 (lower is better)
Translates to: QQVASLPVKIVL*SPSFCFLKALQ
Trigger: TTGCAAAGCCTTCAGAAAGCAGAATGAAGGGGACCACAGAACAATTTTCACAGGAAGAGATGCAACCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CAA 72 bp GACATCACATGTTTGGATATGCTGAGGCCAGTATTTTaGTCTGACAGGGTTGAGTTTGCTGATTCCTCTAGA +
Preference number: 6 (lower is better)
Translates to: DITCLDMLRPVF*SDRVEFADSSR
Trigger: TCTAGAGGAATCAGCAAACTCAACCCTGTCAGACAAAAATACTGGCCTCAGCATATCCAAACATGTGATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CAA 72 bp TTTACACAGTTCCTGCCATCTCTCATAGTATTTCCCTaGGGGATAATAAAAGATAGCCTTCTGGGTGTTAGG +
Preference number: 6 (lower is better)
Translates to: FTQFLPSLIVFP*GIIKDSLLGVR
Trigger: CCTAACACCCAGAAGGCTATCTTTTATTATCCCCAAGGGAAATACTATGAGAGATGGCAGGAACTGTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4
CDS CAA 72 bp AATTTACAGCCACTAACTAACCAGCTCATCAGAGAATaGCTGGCCAGCACTGTCAGGATTTTCTTTAATGAG +
Preference number: 6 (lower is better)
Translates to: NLQPLTNQLIRE*LASTVRIFFNE
Trigger: CTCATTAAAGAAAATCCTGACAGTGCTGGCCAGCAATTCTCTGATGAGCTGGTTAGTTAGTGGCTGTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076106.4