Pregenerated sensors for RNASE10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021872Ensembl transcript IDs: ENSMUST00000022424.8, ENSMUST00000164632.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGATCTTCAGGCCTATGCCCTACACCAACTCACAGCAGGCTCTATaGTTTTCCAGGCTCAGGAAAAGAAGCCTAGCCACGTGGCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: LIFRPMPYTNSQQAL*FSRLRKRSLATWLS Trigger: GGAAAGCCACGTGGCTAGGCTTCTTTTCCTGAGCCTGGAAAATCATAGAGCCTGCTGTGAGTTGGTGTAGGGCATAGGCCTGAAGATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR TCA 90 bp | CTTAAGGTCTATTTAGACTGCTCAAGGCTGGGAGAAGGGCATGTTTaGTCTTCAGGCCTATGCCCTACACCAACTCACAGCAGGCTCTAT | + |
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Preference number: 1 (lower is better) Translates to: LKVYLDCSRLGEGHV*SSGLCPTPTHSRLY Trigger: ATAGAGCCTGCTGTGAGTTGGTGTAGGGCATAGGCCTGAAGATCAAACATGCCCTTCTCCCAGCCTTGAGCAGTCTAAATAGACCTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCAGCAGAGAAGTGTGTTGCATTGTATAGGGCCCAGAAGTCTGTGATTACCAACAAAAATGCAAGTTaGATGACACCTCCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: SAAEKCVALYRAQKSVITNKNAS*MTPPHP Trigger: GGGGTGGGGAGGTGTCATTCAACTTGCATTTTTGTT...GGTAATCACAGACTTCTGGGCCCTATACAATGCAACACACTTCTCTGCTGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR-3UTR TCA 90 bp | GTCAGCACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTAACAAAAATGCAAGTTaGATGACACCTCCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: VSTAHCIYIGKANRPILCNKNAS*MTPPHP Trigger: GGGGTGGGGAGGTGTCATTCAACTTGCATTTTTGTT...ACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTGCTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR-3UTR TCA 90 bp | GTCAGCACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTTCACAGCAGGCTCTATaGTTTTCCAGGCTCAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VSTAHCIYIGKANRPILCSQQAL*FSRLRK Trigger: TTTCCTGAGCCTGGAAAATCATAGAGCCTGCTGTGA...ACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTGCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTCCCCCAGAACAAAAATaGAAGTTGAATGACACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: VSTAHCIYIGKANRPILCPPEQK*KLNDTS Trigger: GGAGGTGTCATTCAACTTGCATTTTTGTTCTGGGGG...ACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTGCTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTTTCAGGGACAGAAGCATCAGTaGATGGAAATCCAAGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: HSTLHLYRKSQQTHPLFQGQKHQ*MEIQEK Trigger: CTTCTCTTGGATTTCCATTCACTGATGCTTCTGTCC...CTGAAACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTTTCAGGACACAGTCCTAGATTaGATGGCTTTAGTTGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: HSTLHLYRKSQQTHPLFQDTVLD*MALVAS Trigger: AGATGCAACTAAAGCCATTCAATCTAGGACTGTGTC...CTGAAACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTTTCAGAGAAGCATCAGTGAATaGAAATCCAAGAGAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: HSTLHLYRKSQQTHPLFQRSISE*KSKRRE Trigger: CTCTCTTCTCTTGGATTTCCATTCACTGATGCTTCT...CTGAAACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCTCTAGAAGCATCAGTGAATaGAAATCCAAGAGAAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: FQKSKIRDGPFSPPRIFSRSISE*KSKRRE Trigger: CTCTCTTCTCTTGGATTTCCATTCACTGATGCTTCT...AGAGAAGATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR TCA 72 bp | AGGCCTATGCCCTACACCAACTCACAGCAGGCTCTATaGTTTTCCAGGCTCAGGAAAAGAAGCCTAGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: RPMPYTNSQQAL*FSRLRKRSLAT Trigger: CGTGGCTAGGCTTCTTTTCCTGAGCCTGGAAAATCATAGAGCCTGCTGTGAGTTGGTGTAGGGCATAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR TCA 72 bp | TATTTAGACTGCTCAAGGCTGGGAGAAGGGCATGTTTaGTCTTCAGGCCTATGCCCTACACCAACTCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: YLDCSRLGEGHV*SSGLCPTPTHS Trigger: GCTGTGAGTTGGTGTAGGGCATAGGCCTGAAGATCAAACATGCCCTTCTCCCAGCCTTGAGCAGTCTAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR-3UTR CAA 90 bp | GTCAGCACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTGAACAAAAATGCAAGTaGAATGACACCTCCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: VSTAHCIYIGKANRPILCEQKCK*NDTSPP Trigger: GGGTGGGGAGGTGTCATTCAACTTGCATTTTTGTTC...ACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTGCTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR CCA 72 bp | GAAATTGACTCCACCTGGGTCATTAAGGTCCAACTGTaGCAAACACTTAAGGTCTATTTAGACTGCTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: EIDSTWVIKVQL*QTLKVYLDCSR Trigger: CCTTGAGCAGTCTAAATAGACCTTAAGTGTTTGCCACAGTTGGACCTTAATGACCCAGGTGGAGTCAATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR-3UTR CAA 90 bp | TTAATAGTCAGCACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCTTCAGCTGGATTGAGTaGTTTTGTTTCAGCTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: LIVSTAHCIYIGKANRPIFSWIE*FCFSWI Trigger: AATCCAGCTGAAACAAAACAACTCAATCCAGCTGAA...GATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTGCTGACTATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR GCA 72 bp | ATCAAGACTCAAAGTTTAATAGTCAGCACAGCACACTaGATTTATATAGGAAAAGCCAACAGACCCATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: IKTQSLIVSTAH*IYIGKANRPIL Trigger: AAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTGCTGACTATTAAACTTTGAGTCTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR TCA 90 bp | TTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCTCTACGGCAGCTGCCATGTaGAGGCCCAGGCCCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FQKSKIRDGPFSPPRIFSTAAAM*RPRPSP Trigger: GGGGCTGGGCCTGGGCCTTCACATGGCAGCTGCCGT...AGAGAAGATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR GCA 90 bp | GTCAGCACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTCTCCAGGACGGCAGCTaGCATGTGAAGGCCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSTAHCIYIGKANRPILCLQDGS*HVKAQA Trigger: GGCCTGGGCCTTCACATGGCAGCTGCCGTCCTGGAG...ACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR TCA 90 bp | ACAGAAGCATCAGTGAATGGAAATCCAAGAGAAGAGAGGCAACGGGCCGAAGAGCCACTTCATCTTCACTaGGGACAGCCTCTTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TEASVNGNPREERQRAEEPLHLH*GQPLLA Trigger: GGCCAGAAGAGGCTGTCCTCAGTGAAGATGAAGTGG...CTCTTCGGCCCGTTGCCTCTCTTCTCTTGGATTTCCATTCACTGATGCTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR GCA 90 bp | AAATCCAAGAGAAGAGAGGCAACGGGCCGAAGAGAAGGGAAAGGCACAAGGTGCCTTCTGTGGTCCAGATaGCCTCTCCCTCTTCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KSKRREATGRREGKGTRCLLWSR*PLPLQY Trigger: ATACTGAAGAGGGAGAGGGCATCTGGACCACAGAAG...GCACCTTGTGCCTTTCCCTTCTCTTCGGCCCGTTGCCTCTCTTCTCTTGGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR TCA 90 bp | AAATCCAAGAGAAGAGAGGCAACGGGCCGAAGAGAAGGGAAAGGCACAAGGTGCCGTTACAGACAGCTTTaGCTGTGTTTGGGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSKRREATGRREGKGTRCRYRQL*LCLGPH Trigger: ATGAGGACCCAAACACAGTCAAAGCTGTCTGTAACG...GCACCTTGTGCCTTTCCCTTCTCTTCGGCCCGTTGCCTCTCTTCTCTTGGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CCA 90 bp | AAATCCAAGAGAAGAGAGGCAACGGGCCGAAGAGAAGGGAAAGGCACAAGGTGCAGCTTTGACTGTGTTTaGGTCCTCATGGATGAACGT | + |
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Preference number: 4 (lower is better) Translates to: KSKRREATGRREGKGTRCSFDCV*VLMDER Trigger: ACGTTCATCCATGAGGACCCAAACACAGTCAAAGCT...GCACCTTGTGCCTTTCCCTTCTCTTCGGCCCGTTGCCTCTCTTCTCTTGGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| 3UTR CAA 72 bp | CTATTTAGACTGCTCAAGGCTGGGAGAAGGGCATGTTaGATCTTCAGGCCTATGCCCTACACCAACTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LFRLLKAGRRAC*IFRPMPYTNSQ Trigger: CTGTGAGTTGGTGTAGGGCATAGGCCTGAAGATCAAACATGCCCTTCTCCCAGCCTTGAGCAGTCTAAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR TCA 90 bp | GTCAGCACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTGAGCGTCCTTCTCTGTaGGCTGTACCCAGAAACTGC | + |
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Preference number: 4 (lower is better) Translates to: VSTAHCIYIGKANRPILCERPSL*AVPRNC Trigger: GCAGTTTCTGGGTACAGCTCACAGAGAAGGACGCTC...ACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTGCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022424.8 |
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| CDS-3UTR GCA 90 bp | ATTATATTTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTCCAGGACGGCAGCTaGCATGTGAAGGCCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: IIFSEVKNQRWSILSSQDLQDGS*HVKAQA Trigger: GGCCTGGGCCTTCACATGGCAGCTGCCGTCCTGGAG...ATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAAATATAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CCA 90 bp | ACAGAAGCATCAGTGAATGGAAATCCAAGAGAAGAGAGGCAACGGGCCGAAGAGCCCTCTTCAGTATTCTaGGAGTCACTGGGCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: TEASVNGNPREERQRAEEPSSVF*ESLGQN Trigger: ATTTTGGCCCAGTGACTCCCAGAATACTGAAGAGGG...CTCTTCGGCCCGTTGCCTCTCTTCTCTTGGATTTCCATTCACTGATGCTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR GCA 90 bp | AAATCCAAGAGAAGAGAGGCAACGGGCCGAAGAGAAGGGAAAGGCACAAGGTGCATCATGAACAACAGATaGACCAGTGTCACCTTCATT | + |
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Preference number: 4 (lower is better) Translates to: KSKRREATGRREGKGTRCIMNNR*TSVTFI Trigger: AATGAAGGTGACACTGGTGCATCTGTTGTTCATGAT...GCACCTTGTGCCTTTCCCTTCTCTTCGGCCCGTTGCCTCTCTTCTCTTGGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022424.8 |
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| CDS-3UTR TCA 90 bp | TATTTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCCCACTTCATCTTCACTaGGGACAGCCTCTTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: YFQKSKIRDGPFSPPRIFPLHLH*GQPLLA Trigger: GGCCAGAAGAGGCTGTCCTCAGTGAAGATGAAGTGG...GAAGATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR TCA 90 bp | GTCAGCACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTCGTTACAGACAGCTTTaGCTGTGTTTGGGTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: VSTAHCIYIGKANRPILCRYRQL*LCLGPH Trigger: ATGAGGACCCAAACACAGTCAAAGCTGTCTGTAACG...ACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTGCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CCA 90 bp | TTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCTCTGGGAGTGACTTGGCCTaGTTTGGCCAATTTGCACAA | + |
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Preference number: 4 (lower is better) Translates to: FQKSKIRDGPFSPPRIFSGSDLA*FGQFAQ Trigger: TTGTGCAAATTGGCCAAACCAGGCCAAGTCACTCCC...AGAGAAGATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CCA 90 bp | CACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTTTCAGGGGAGTGACTTGGCCTaGTTTGGCCAATTTGCACAA | + |
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Preference number: 4 (lower is better) Translates to: HSTLHLYRKSQQTHPLFQGSDLA*FGQFAQ Trigger: TTGTGCAAATTGGCCAAACCAGGCCAAGTCACTCCC...CTGAAACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CCA 90 bp | CACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTTTCAGCAGTTGGGAGTGACTTaGCCTGGTTTGGCCAATTTG | + |
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Preference number: 4 (lower is better) Translates to: HSTLHLYRKSQQTHPLFQQLGVT*PGLANL Trigger: CAAATTGGCCAAACCAGGCCAAGTCACTCCCAACTG...CTGAAACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR GCA 90 bp | ATCAGTGAATGGAAATCCAAGAGAAGAGAGGCAACGGGCCGAAGAGAAGGGAAACTCCTTTATCTTGTGTaGCATCATGGTATTACAGTC | + |
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Preference number: 4 (lower is better) Translates to: ISEWKSKRREATGRREGKLLYLV*HHGITV Trigger: GACTGTAATACCATGATGGCACACAAGATAAAGGAG...TTTCCCTTCTCTTCGGCCCGTTGCCTCTCTTCTCTTGGATTTCCATTCACTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR TCA 90 bp | TATTTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCTTGGGTCCTCATGGATaGACGTGTACTGGTTTATGC | + |
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Preference number: 4 (lower is better) Translates to: YFQKSKIRDGPFSPPRIFLGPHG*TCTGLC Trigger: GCATAAACCAGTACACGTTCATCCATGAGGACCCAA...GAAGATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR GCA 90 bp | TATTTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCTGGCCAGACAGGTTGTaGCATTTCTTTGTAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: YFQKSKIRDGPFSPPRIFWPDRL*HFFVAK Trigger: CTTGGCTACAAAGAAATGGCACAACCTGTCTGGCCA...GAAGATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CCA 90 bp | TATTTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCCCCTCTTCAGTATTCTaGGAGTCACTGGGCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: YFQKSKIRDGPFSPPRIFPSSVF*ESLGQN Trigger: ATTTTGGCCCAGTGACTCCCAGAATACTGAAGAGGG...GAAGATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR GCA 90 bp | ATTATATTTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCTGTGGTCCAGATaGCCTCTCCCTCTTCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: IIFSEVKNQRWSILSSQDLLWSR*PLPLQY Trigger: ATACTGAAGAGGGAGAGGGCATCTGGACCACAGAAG...ATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAAATATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR GCA 90 bp | GTCAGCACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTTTGTCTGGTTTGGCCAATTTaGACAATGTCAGATCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: VSTAHCIYIGKANRPILCLVWPI*TMSDQK Trigger: CTTTTGATCTGACATTGTGCAAATTGGCCAAACCAG...ACAAAGGATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTGCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR GCA 90 bp | TTAATAGTCAGCACAGCACACTGCATTTATATAGGAAAAGCCAACAGACCCATCCTCCTTTATCTTGTGTaGCATCATGGTATTACAGTC | + |
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Preference number: 4 (lower is better) Translates to: LIVSTAHCIYIGKANRPILLYLV*HHGITV Trigger: GACTGTAATACCATGATGGCACACAAGATAAAGGAG...GATGGGTCTGTTGGCTTTTCCTATATAAATGCAGTGTGCTGTGCTGACTATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR GCA 90 bp | AAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCTCTATAGTTAGCAAACTGGTTTGGCCAATTTaGACAATGTCAGATCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: KIRDGPFSPPRIFSIVSKLVWPI*TMSDQK Trigger: CTTTTGATCTGACATTGTGCAAATTGGCCAAACCAG...TTTGCTAACTATAGAGAAGATCCTGGGAGGAGAGAATGGACCATCTCTGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CCA 90 bp | TTATATTTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTATTCTGGGAGTCACTaGGCCAAAATTCATTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LYFQKSKIRDGPFSPPRIYSGSH*AKIHSV Trigger: CACTGAATGAATTTTGGCCCAGTGACTCCCAGAATA...GATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAAATATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CCA 90 bp | ATTATATTTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATTATTCTGGGAGTCACTaGGCCAAAATTCATTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: IIFSEVKNQRWSILSSQDYSGSH*AKIHSV Trigger: CACTGAATGAATTTTGGCCCAGTGACTCCCAGAATA...ATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAAATATAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS CCA 90 bp | TCCCTCTTCAGTATTCTGGGAGTCACTGGGCCAAAATTCATTCAGTaGCTGATCCTCCAGGACGGCAGCTGCCATGTGAAGGCCCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SLFSILGVTGPKFIQ*LILQDGSCHVKAQA Trigger: GGCCTGGGCCTTCACATGGCAGCTGCCGTCCTGGAGGATCAGCCACTGAATGAATTTTGGCCCAGTGACTCCCAGAATACTGAAGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS CCA 90 bp | CTGTGGTCCAGATGCCCTCTCCCTCTTCAGTATTCTGGGAGTCACTaGGCCAAAATTCATTCAGTGGCTGATCCTCCAGGACGGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LWSRCPLPLQYSGSH*AKIHSVADPPGRQL Trigger: CAGCTGCCGTCCTGGAGGATCAGCCACTGAATGAATTTTGGCCCAGTGACTCCCAGAATACTGAAGAGGGAGAGGGCATCTGGACCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS TCA 90 bp | CCAGGCCCAGCCCCAGCCCTAGGCCTAGCAACAGCAGCAACATCATaGACAACAGATGCACCAGTGTCACCTTCATTTTGCCTACACTTG | + |
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Preference number: 5 (lower is better) Translates to: PGPAPALGLATAATS*TTDAPVSPSFCLHL Trigger: CAAGTGTAGGCAAAATGAAGGTGACACTGGTGCATCTGTTGTTCATGATGTTGCTGCTGTTGCTAGGCCTAGGGCTGGGGCTGGGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022424.8 |
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| CDS GCA 90 bp | AGCCTCTTCTGGCCAGACAGGTTGTGCCATTTCTTTGTAGCCAAGTaGCAGACCTTCTGTGGTCCAGATGCCCTCTCCCTCTTCAGTATT | + |
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Preference number: 5 (lower is better) Translates to: SLFWPDRLCHFFVAK*QTFCGPDALSLFSI Trigger: AATACTGAAGAGGGAGAGGGCATCTGGACCACAGAAGGTCTGGCACTTGGCTACAAAGAAATGGCACAACCTGTCTGGCCAGAAGAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS CCA 90 bp | AGACAGGTTGTGCCATTTCTTTGTAGCCAAGTGCCAGACCTTCTGTaGTCCAGATGCCCTCTCCCTCTTCAGTATTCTGGGAGTCACTGG | + |
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Preference number: 5 (lower is better) Translates to: RQVVPFLCSQVPDLL*SRCPLPLQYSGSHW Trigger: CCAGTGACTCCCAGAATACTGAAGAGGGAGAGGGCATCTGGACCACAGAAGGTCTGGCACTTGGCTACAAAGAAATGGCACAACCTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | AAATCCAAGAGAAGAGAGGCAACGGGCCGAAGAGAAGGGAAAGGCACAAGGTGCTTCTGGCCAGACAGGTaGTGCCATTTCTTTGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: KSKRREATGRREGKGTRCFWPDR*CHFFVA Trigger: GGCTACAAAGAAATGGCACAACCTGTCTGGCCAGAA...GCACCTTGTGCCTTTCCCTTCTCTTCGGCCCGTTGCCTCTCTTCTCTTGGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS GCA 90 bp | GTGCCATTTCTTTGTAGCCAAGTGCCAGACCTTCTGTGGTCCAGATaGCCTCTCCCTCTTCAGTATTCTGGGAGTCACTGGGCCAAAATT | + |
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Preference number: 5 (lower is better) Translates to: VPFLCSQVPDLLWSR*PLPLQYSGSHWAKI Trigger: AATTTTGGCCCAGTGACTCCCAGAATACTGAAGAGGGAGAGGGCATCTGGACCACAGAAGGTCTGGCACTTGGCTACAAAGAAATGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | ACAGAAGCATCAGTGAATGGAAATCCAAGAGAAGAGAGGCAACGGGCCGAAGAGCCGTTACAGACAGCTTaGACTGTGTTTGGGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: TEASVNGNPREERQRAEEPLQTA*TVFGSS Trigger: TGAGGACCCAAACACAGTCAAAGCTGTCTGTAACGG...CTCTTCGGCCCGTTGCCTCTCTTCTCTTGGATTTCCATTCACTGATGCTTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS GCA 90 bp | CCCAGCCCTAGGCCTAGCAACAGCAGCAACATCATGAACAACAGATaGACCAGTGTCACCTTCATTTTGCCTACACTTGTAAGCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: PSPRPSNSSNIMNNR*TSVTFILPTLVSSF Trigger: AAAGCTGCTTACAAGTGTAGGCAAAATGAAGGTGACACTGGTGCATCTGTTGTTCATGATGTTGCTGCTGTTGCTAGGCCTAGGGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022424.8 |
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| CDS-3UTR CAA 90 bp | TCTGCAGCAGAGAAGTGTGTTGCATTGTATAGGGCCCAGAAGTCTGTGATTACCGTGACTTGGCCTGGTTaGGCCAATTTGCACAATGTC | + |
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Preference number: 5 (lower is better) Translates to: SAAEKCVALYRAQKSVITVTWPG*ANLHNV Trigger: GACATTGTGCAAATTGGCCAAACCAGGCCAAGTCAC...GGTAATCACAGACTTCTGGGCCCTATACAATGCAACACACTTCTCTGCTGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS CCA 90 bp | GTCACAGTCAACCAGGGAACCGTTACAGACAGCTTTGACTGTGTTTaGGTCCTCATGGATGAACGTGTACTGGTTTATGCAGCTCTGATT | + |
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Preference number: 5 (lower is better) Translates to: VTVNQGTVTDSFDCV*VLMDERVLVYAALI Trigger: AATCAGAGCTGCATAAACCAGTACACGTTCATCCATGAGGACCCAAACACAGTCAAAGCTGTCTGTAACGGTTCCCTGGTTGACTGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS CCA 90 bp | TTCGGTTATGTAAGTCAGATAGTGACAGTTGGGAGTGACTTGGCCTaGTTTGGCCAATTTGCACAATGTCAGATCAAAAGGCCGGGGACT | + |
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Preference number: 5 (lower is better) Translates to: FGYVSQIVTVGSDLA*FGQFAQCQIKRPGT Trigger: AGTCCCCGGCCTTTTGATCTGACATTGTGCAAATTGGCCAAACCAGGCCAAGTCACTCCCAACTGTCACTATCTGACTTACATAACCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | ATCAGTGAATGGAAATCCAAGAGAAGAGAGGCAACGGGCCGAAGAGAAGGGAAAAGTGTCACCTTCATTTaGCCTACACTTGTAAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ISEWKSKRREATGRREGKSVTFI*PTLVSS Trigger: GCTGCTTACAAGTGTAGGCAAAATGAAGGTGACACT...TTTCCCTTCTCTTCGGCCCGTTGCCTCTCTTCTCTTGGATTTCCATTCACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022424.8 |
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| CDS TCA 90 bp | GTGTTTGGGTCCTCATGGATGAACGTGTACTGGTTTATGCAGCTCTaGTTAGGCTCCTTTATCTTGTGTGCCATCATGGTATTACAGTCC | + |
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Preference number: 5 (lower is better) Translates to: VFGSSWMNVYWFMQL*LGSFILCAIMVLQS Trigger: GGACTGTAATACCATGATGGCACACAAGATAAAGGAGCCTAATCAGAGCTGCATAAACCAGTACACGTTCATCCATGAGGACCCAAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | ACCCAAGGAGGGGACAGAAGCATCAGTGAATGGAAATCCAAGAGAAGAGAGGCATTAGGCTCCTTTATCTaGTGTGCCATCATGGTATTA | + |
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Preference number: 5 (lower is better) Translates to: TQGGDRSISEWKSKRREALGSFI*CAIMVL Trigger: TAATACCATGATGGCACACAAGATAAAGGAGCCTAA...TGCCTCTCTTCTCTTGGATTTCCATTCACTGATGCTTCTGTCCCCTCCTTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | TCTGCAGCAGAGAAGTGTGTTGCATTGTATAGGGCCCAGAAGTCTGTGATTACCCCTGGTTTGGCCAATTaGCACAATGTCAGATCAAAA | + |
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Preference number: 5 (lower is better) Translates to: SAAEKCVALYRAQKSVITPGLAN*HNVRSK Trigger: TTTTGATCTGACATTGTGCAAATTGGCCAAACCAGG...GGTAATCACAGACTTCTGGGCCCTATACAATGCAACACACTTCTCTGCTGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | ATCAGTGAATGGAAATCCAAGAGAAGAGAGGCAACGGGCCGAAGAGAAGGGAAACCTGGTTTGGCCAATTaGCACAATGTCAGATCAAAA | + |
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Preference number: 5 (lower is better) Translates to: ISEWKSKRREATGRREGKPGLAN*HNVRSK Trigger: TTTTGATCTGACATTGTGCAAATTGGCCAAACCAGG...TTTCCCTTCTCTTCGGCCCGTTGCCTCTCTTCTCTTGGATTTCCATTCACTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | TTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCTCTGTGACTTGGCCTGGTTaGGCCAATTTGCACAATGTC | + |
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Preference number: 5 (lower is better) Translates to: FQKSKIRDGPFSPPRIFSVTWPG*ANLHNV Trigger: GACATTGTGCAAATTGGCCAAACCAGGCCAAGTCAC...AGAGAAGATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | TATTTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCTTCTGGCCAGACAGGTaGTGCCATTTCTTTGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: YFQKSKIRDGPFSPPRIFFWPDR*CHFFVA Trigger: GGCTACAAAGAAATGGCACAACCTGTCTGGCCAGAA...GAAGATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | TCTGCAGCAGAGAAGTGTGTTGCATTGTATAGGGCCCAGAAGTCTGTGATTACCTTAGGCTCCTTTATCTaGTGTGCCATCATGGTATTA | + |
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Preference number: 5 (lower is better) Translates to: SAAEKCVALYRAQKSVITLGSFI*CAIMVL Trigger: TAATACCATGATGGCACACAAGATAAAGGAGCCTAA...GGTAATCACAGACTTCTGGGCCCTATACAATGCAACACACTTCTCTGCTGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | AAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCTCTATAGTTAGCAAACCGTTACAGACAGCTTaGACTGTGTTTGGGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KIRDGPFSPPRIFSIVSKPLQTA*TVFGSS Trigger: TGAGGACCCAAACACAGTCAAAGCTGTCTGTAACGG...TTTGCTAACTATAGAGAAGATCCTGGGAGGAGAGAATGGACCATCTCTGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | TTATATTTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCACAGTTGGGAGTGACTaGGCCTGGTTTGGCCAATTT | + |
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Preference number: 5 (lower is better) Translates to: LYFQKSKIRDGPFSPPRITVGSD*AWFGQF Trigger: AAATTGGCCAAACCAGGCCAAGTCACTCCCAACTGT...GATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAAATATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | ATTATATTTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATACAGTTGGGAGTGACTaGGCCTGGTTTGGCCAATTT | + |
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Preference number: 5 (lower is better) Translates to: IIFSEVKNQRWSILSSQDTVGSD*AWFGQF Trigger: AAATTGGCCAAACCAGGCCAAGTCACTCCCAACTGT...ATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAAATATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | TTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCTTCTCTAGTTGTTTCTTGTCATaGCATGTCATGAAAATGACC | + |
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Preference number: 5 (lower is better) Translates to: FQKSKIRDGPFSPPRIFSSCFLS*HVMKMT Trigger: GGTCATTTTCATGACATGCAATGACAAGAAACAACT...AGAGAAGATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS-3UTR CAA 90 bp | TTATATTTTCAGAAGTCAAAAATCAGAGATGGTCCATTCTCTCCTCCCAGGATCAGTTGTTTCTTGTCATaGCATGTCATGAAAATGACC | + |
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Preference number: 5 (lower is better) Translates to: LYFQKSKIRDGPFSPPRISCFLS*HVMKMT Trigger: GGTCATTTTCATGACATGCAATGACAAGAAACAACT...GATCCTGGGAGGAGAGAATGGACCATCTCTGATTTTTGACTTCTGAAAATATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS GCA 72 bp | TGGCCAGACAGGTTGTGCCATTTCTTTGTAGCCAAGTaGCAGACCTTCTGTGGTCCAGATGCCCTCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: WPDRLCHFFVAK*QTFCGPDALSL Trigger: GAGGGAGAGGGCATCTGGACCACAGAAGGTCTGGCACTTGGCTACAAAGAAATGGCACAACCTGTCTGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS GCA 72 bp | CTTTGTAGCCAAGTGCCAGACCTTCTGTGGTCCAGATaGCCTCTCCCTCTTCAGTATTCTGGGAGTCACTGG | + |
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Preference number: 6 (lower is better) Translates to: LCSQVPDLLWSR*PLPLQYSGSHW Trigger: CCAGTGACTCCCAGAATACTGAAGAGGGAGAGGGCATCTGGACCACAGAAGGTCTGGCACTTGGCTACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS CAA 90 bp | GACCTTTTCGGTTATGTAAGTCAGATAGTGACAGTTGGGAGTGACTaGGCCTGGTTTGGCCAATTTGCACAATGTCAGATCAAAAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: DLFGYVSQIVTVGSD*AWFGQFAQCQIKRP Trigger: CGGCCTTTTGATCTGACATTGTGCAAATTGGCCAAACCAGGCCAAGTCACTCCCAACTGTCACTATCTGACTTACATAACCGAAAAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS CCA 72 bp | AACCAGGGAACCGTTACAGACAGCTTTGACTGTGTTTaGGTCCTCATGGATGAACGTGTACTGGTTTATGCA | + |
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Preference number: 6 (lower is better) Translates to: NQGTVTDSFDCV*VLMDERVLVYA Trigger: TGCATAAACCAGTACACGTTCATCCATGAGGACCCAAACACAGTCAAAGCTGTCTGTAACGGTTCCCTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS GCA 72 bp | AGGCCTAGCAACAGCAGCAACATCATGAACAACAGATaGACCAGTGTCACCTTCATTTTGCCTACACTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RPSNSSNIMNNR*TSVTFILPTLV Trigger: TACAAGTGTAGGCAAAATGAAGGTGACACTGGTGCATCTGTTGTTCATGATGTTGCTGCTGTTGCTAGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022424.8 |
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| CDS CCA 72 bp | GTAAGTCAGATAGTGACAGTTGGGAGTGACTTGGCCTaGTTTGGCCAATTTGCACAATGTCAGATCAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: VSQIVTVGSDLA*FGQFAQCQIKR Trigger: CCTTTTGATCTGACATTGTGCAAATTGGCCAAACCAGGCCAAGTCACTCCCAACTGTCACTATCTGACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS CAA 72 bp | GGTTATGTAAGTCAGATAGTGACAGTTGGGAGTGACTaGGCCTGGTTTGGCCAATTTGCACAATGTCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: GYVSQIVTVGSD*AWFGQFAQCQI Trigger: GATCTGACATTGTGCAAATTGGCCAAACCAGGCCAAGTCACTCCCAACTGTCACTATCTGACTTACATAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS TCA 72 bp | TCCTCATGGATGAACGTGTACTGGTTTATGCAGCTCTaGTTAGGCTCCTTTATCTTGTGTGCCATCATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SSWMNVYWFMQL*LGSFILCAIMV Trigger: TACCATGATGGCACACAAGATAAAGGAGCCTAATCAGAGCTGCATAAACCAGTACACGTTCATCCATGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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| CDS TCA 72 bp | TTTCGGTTATGTAAGTCAGATAGTGACAGTTGGGAGTaGCTTGGCCTGGTTTGGCCAATTTGCACAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: FRLCKSDSDSWE*LGLVWPICTMS Trigger: TGACATTGTGCAAATTGGCCAAACCAGGCCAAGTCACTCCCAACTGTCACTATCTGACTTACATAACCGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022424.8 ENSMUST00000164632.2 |
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