Pregenerated sensors for RMND5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001054Ensembl transcript IDs: ENSMUST00000001081.10, ENSMUST00000136020.8, ENSMUST00000147009.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTGGGTCTCTTGGTAATGCTGGTCTGAGAGGCATCACAGTCTGCTaGAGCCAGTCCCTCCACAAAGGCCCATGGGTGGATTACACCTTC | + |
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Preference number: 1 (lower is better) Translates to: VGSLGNAGLRGITVC*SQSLHKGPWVDYTF Trigger: GAAGGTGTAATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGACTGTGATGCCTCTCAGACCAGCATTACCAAGAGACCCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR TCA 90 bp | CATGGGTGGATTACACCTTCTAGAATGTTCCTTGGAATCAGAATATaGTGCGTTTCCCATCTGCTGGATTCTGTTCCATGGGACAGTAGG | + |
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Preference number: 1 (lower is better) Translates to: HGWITPSRMFLGIRI*CVSHLLDSVPWDSR Trigger: CCTACTGTCCCATGGAACAGAATCCAGCAGATGGGAAACGCATCATATTCTGATTCCAAGGAACATTCTAGAAGGTGTAATCCACCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCGTTCACAGCCTTCCCTaGCCTCTGCCTAGGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: APSGASVNRMQEQSSQSPVHSLP*PLPRQV Trigger: AACCTGCCTAGGCAGAGGCCAGGGAAGGCTGTGAAC...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCTTGGTAATGCTGGTCTaGGAGGCATCACAGTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: APSGASVNRMQEQSSQSPLVMLV*EASQSA Trigger: AGCAGACTGTGATGCCTCTCAGACCAGCATTACCAA...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCGATGCGTTTCCCATCTaGTGGATTCTGTTCCATGGG | + |
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Preference number: 2 (lower is better) Translates to: APSGASVNRMQEQSSQSPDAFPI*WILFHG Trigger: CCCATGGAACAGAATCCAGCAGATGGGAAACGCATC...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| 3UTR-3UTR TCA 90 bp | AAGACCTTTGCTGCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTGGCAACTCATCCTTGTaGCTCCACACCCCAGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: KTFAAPSGASVNRMQEQSGNSSL*LHTPVH Trigger: GTGCACTGGGGTGTGGAGTCACAAGGATGAGTTGCC...ACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGCAGCAAAGGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| 3UTR-3UTR GCA 90 bp | AACACTGAGTGGTACCAGCACTTCATGCCCAGCTCTATCTCAATCGGCAACTCAGACTCCACACCCCAGTaGACTGCCTCTGTTCGATCA | + |
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Preference number: 2 (lower is better) Translates to: NTEWYQHFMPSSISIGNSDSTPQ*TASVRS Trigger: TGATCGAACAGAGGCAGTGCACTGGGGTGTGGAGTC...TGAGTTGCCGATTGAGATAGAGCTGGGCATGAAGTGCTGGTACCACTCAGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| 3UTR CAA 90 bp | CAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTaGATGACCAAGACCTTTGCTGCTCCGTCAGGGGCAAGTGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: QLETPLMPGVERCLH*MTKTFAAPSGASVN Trigger: GTTTACACTTGCCCCTGACGGAGCAGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCAAGACCTTTGCTGGAAGCATAGGCTGCTaGTTCACAGCCTTCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: PLMPGVERCLHLMTKTFAGSIGC*FTAFPG Trigger: GCCAGGGAAGGCTGTGAACCAGCAGCCTATGCTTCC...AGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR-3UTR CCA 90 bp | AAGACCTTTGCTGCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTCATGCAAACACTGAGTaGTACCAGCACTTCATGCCC | + |
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Preference number: 2 (lower is better) Translates to: KTFAAPSGASVNRMQEQSHANTE*YQHFMP Trigger: GGGCATGAAGTGCTGGTACCACTCAGTGTTTGCATG...ACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGCAGCAAAGGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCTTGGTAATGCTGGTCTaGGAGGCATCACAGTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: QLETPLMPGVERCLHLMTLVMLV*EASQSA Trigger: AGCAGACTGTGATGCCTCTCAGACCAGCATTACCAA...GGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR-3UTR GCA 90 bp | CCACAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGTTGGAATCTGAGGTCTaGTGTCGCAGGATAGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: PQLETPLMPGVERCLHLMLESEV*CRRIGH Trigger: ATGCCCTATCCTGCGACAGCAGACCTCAGATTCCAA...CATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| 3UTR CAA 90 bp | CCTCCACAAAGGCCCATGGGTGGATTACACCTTCTAGAATGTTCCTaGGAATCAGAATATGATGCGTTTCCCATCTGCTGGATTCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: PPQRPMGGLHLLECS*ESEYDAFPICWILF Trigger: GAACAGAATCCAGCAGATGGGAAACGCATCATATTCTGATTCCAAGGAACATTCTAGAAGGTGTAATCCACCCATGGGCCTTTGTGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCAAGACCTTTGCTTCTCTGGAGATGACGTaGCCACAGATGAGCTTGATG | + |
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Preference number: 2 (lower is better) Translates to: PLMPGVERCLHLMTKTFASLEMT*PQMSLM Trigger: CATCAAGCTCATCTGTGGCCACGTCATCTCCAGAGA...AGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGAATGTTCCTTGGAATCAGAATATGATGCGTTTCCCATCTGCTGGATTCTGGGTACCAGCACTTCATaGCCAGCTCTATCTCAATCG | + |
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Preference number: 2 (lower is better) Translates to: LECSLESEYDAFPICWILGTSTS*PALSQS Trigger: CGATTGAGATAGAGCTGGGCATGAAGTGCTGGTACC...CAGAATCCAGCAGATGGGAAACGCATCATATTCTGATTCCAAGGAACATTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAGTTATAAAACAGCATTCAGTTCTAACGGGTTATTTACAGTGGAGAATGGTTCACAGCCTTCCCTaGCCTCTGCCTAGGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LKVIKQHSVLTGYLQWRMVHSLP*PLPRQV Trigger: AACCTGCCTAGGCAGAGGCCAGGGAAGGCTGTGAAC...CATTCTCCACTGTAAATAACCCGTTAGAACTGAATGCTGTTTTATAACTTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCACAGTGGAGAATGAATaGGTAGATACAGTTGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: QLETPLMPGVERCLHLMTTVENE*VDTVET Trigger: AGTCTCAACTGTATCTACCCATTCATTCTCCACTGT...GGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAAAGTTATAAAACAGCATTCAGTTCTAACGGGTTATTTACAGTGGAGAATGGCGTTTCCCATCTGCTaGATTCTGTTCCATGGGACA | + |
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Preference number: 2 (lower is better) Translates to: LKVIKQHSVLTGYLQWRMAFPIC*ILFHGT Trigger: TGTCCCATGGAACAGAATCCAGCAGATGGGAAACGC...CATTCTCCACTGTAAATAACCCGTTAGAACTGAATGCTGTTTTATAACTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAAAGTTATAAAACAGCATTCAGTTCTAACGGGTTATTTACAGTGGAGAATGATGGGTAGATACAGTTaGGACTGTACAGTAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: LKVIKQHSVLTGYLQWRMMGRYS*DCTVGS Trigger: ACTTCCTACTGTACAGTCTCAACTGTATCTACCCAT...CATTCTCCACTGTAAATAACCCGTTAGAACTGAATGCTGTTTTATAACTTTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR TCA 72 bp | CTTGGTAATGCTGGTCTGAGAGGCATCACAGTCTGCTaGAGCCAGTCCCTCCACAAAGGCCCATGGGTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LGNAGLRGITVC*SQSLHKGPWVD Trigger: ATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGACTGTGATGCCTCTCAGACCAGCATTACCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR CCA 72 bp | GTAAGGAAGCATAGGCTGCTGGTTCACAGCCTTCCCTaGCCTCTGCCTAGGCAGGTTGGGTCTCTTGGTAAT | + |
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Preference number: 3 (lower is better) Translates to: VRKHRLLVHSLP*PLPRQVGSLGN Trigger: ATTACCAAGAGACCCAACCTGCCTAGGCAGAGGCCAGGGAAGGCTGTGAACCAGCAGCCTATGCTTCCTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR CCA 72 bp | TCTGCTGAAGCCAGTCCCTCCACAAAGGCCCATGGGTaGATTACACCTTCTAGAATGTTCCTTGGAATCAGA | + |
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Preference number: 3 (lower is better) Translates to: SAEASPSTKAHG*ITPSRMFLGIR Trigger: TCTGATTCCAAGGAACATTCTAGAAGGTGTAATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| 3UTR-3UTR CAA 90 bp | CCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCAAGACCTTTGCTCAGCTGGAAACCCCTTaGATGCCAGGAGTAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: PLMPGVERCLHLMTKTFAQLETP*MPGVER Trigger: TCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTG...AGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR GCA 72 bp | AGTAGAAAGATGTCTGCATTTGATGACCAAGACCTTTaGTGCTCCGTCAGGGGCAAGTGTAAACAGAATGCA | + |
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Preference number: 3 (lower is better) Translates to: SRKMSAFDDQDL*CSVRGKCKQNA Trigger: TGCATTCTGTTTACACTTGCCCCTGACGGAGCAGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| 3UTR-3UTR CAA 90 bp | CCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCAAGACCTTTGCTCCATTGATGAGTTTGTaGAGTGCATCTCTGGAGATG | + |
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Preference number: 3 (lower is better) Translates to: PLMPGVERCLHLMTKTFAPLMSL*SASLEM Trigger: CATCTCCAGAGATGCACTCAACAAACTCATCAATGG...AGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| CDS-3UTR GCA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCCTGAGGGCCTCCAGCTaGTTCTCGGGGCCCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: APSGASVNRMQEQSSQSPLRASS*FSGPPA Trigger: AGCTGGGGGCCCCGAGAAGCAGCTGGAGGCCCTCAG...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR TCA 90 bp | CATCACAGTCTGCTGAAGCCAGTCCCTCCACAAAGGCCCATGGGTGGATTACACAAGGGACAGCGTGGCTaGGAGAGGGGTGCCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: HHSLLKPVPPQRPMGGLHKGQRG*ERGALE Trigger: CTCCAGGGCACCCCTCTCTCAGCCACGCTGTCCCTT...GTGTAATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGACTGTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR TCA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCAGCAGGCGCTGCCTGTaGGATACAGCCCATTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: APSGASVNRMQEQSSQSPSRRCL*DTAHSS Trigger: GCTGGAATGGGCTGTATCTCACAGGCAGCGCCTGCT...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR TCA 90 bp | TCTGCTGAAGCCAGTCCCTCCACAAAGGCCCATGGGTGGATTACACCTTCTAGAACTCCAGCGAGCTGTTaGGCTCCAGCAGGCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SAEASPSTKAHGWITPSRTPASC*APAGAA Trigger: GGCAGCGCCTGCTGGAGCTCAACAGCTCGCTGGAGT...TCTAGAAGGTGTAATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CCA 90 bp | CATCACAGTCTGCTGAAGCCAGTCCCTCCACAAAGGCCCATGGGTGGATTACACCCTGGAGAGCTGCACTaGCCAGCTCGGCTCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: HHSLLKPVPPQRPMGGLHPGELH*PARLSA Trigger: AGCTGAGAGCCGAGCTGGCCAGTGCAGCTCTCCAGG...GTGTAATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGACTGTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CCA 90 bp | TCTGAGGTCTGCTGTCGCAGGATAGGGCATGCAAACACTGAGTGGTACCAGCACCCTGGAGAGCTGCACTaGCCAGCTCGGCTCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SEVCCRRIGHANTEWYQHPGELH*PARLSA Trigger: AGCTGAGAGCCGAGCTGGCCAGTGCAGCTCTCCAGG...GTGCTGGTACCACTCAGTGTTTGCATGCCCTATCCTGCGACAGCAGACCTCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| CDS-3UTR CCA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCTCACAAGGGACAGCGTaGCTGAGAGAGGGGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: APSGASVNRMQEQSSQSPSQGTA*LREGCP Trigger: AGGGCACCCCTCTCTCAGCCACGCTGTCCCTTGTGA...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR GCA 90 bp | AGCCTTCCCTGGCCTCTGCCTAGGCAGGTTGGGTCTCTTGGTAATGCTGGTCTGCCTTGCTGGTACAGGTaGTCTACGATGGCCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLPWPLPRQVGSLGNAGLPCWYR*STMAIC Trigger: GCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGG...CAGACCAGCATTACCAAGAGACCCAACCTGCCTAGGCAGAGGCCAGGGAAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CCA 90 bp | CATCACAGTCTGCTGAAGCCAGTCCCTCCACAAAGGCCCATGGGTGGATTACACTCACAAGGGACAGCGTaGCTGAGAGAGGGGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: HHSLLKPVPPQRPMGGLHSQGTA*LREGCP Trigger: AGGGCACCCCTCTCTCAGCCACGCTGTCCCTTGTGA...GTGTAATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGACTGTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR GCA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCATCTGCAGGATCTGCTaGTGCTTCTCACGGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: APSGASVNRMQEQSSQSPICRIC*CFSRES Trigger: GGACTCCCGTGAGAAGCAGCAGCAGATCCTGCAGAT...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR GCA 90 bp | AGCCTTCCCTGGCCTCTGCCTAGGCAGGTTGGGTCTCTTGGTAATGCTGGTCTGTCTACGATGGCCATCTaGAGGATCTGCTGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLPWPLPRQVGSLGNAGLSTMAI*RICCCF Trigger: GAAGCAGCAGCAGATCCTGCAGATGGCCATCGTAGA...CAGACCAGCATTACCAAGAGACCCAACCTGCCTAGGCAGAGGCCAGGGAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR GCA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCGACTCCACACCCCAGTaGACTGCCTCTGTTCGATCA | + |
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Preference number: 4 (lower is better) Translates to: APSGASVNRMQEQSSQSPDSTPQ*TASVRS Trigger: TGATCGAACAGAGGCAGTGCACTGGGGTGTGGAGTC...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
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| CDS-3UTR CCA 90 bp | AGCCTTCCCTGGCCTCTGCCTAGGCAGGTTGGGTCTCTTGGTAATGCTGGTCTGCTGAGCATGCCTTGCTaGTACAGGTGCTCTACGATG | + |
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Preference number: 4 (lower is better) Translates to: SLPWPLPRQVGSLGNAGLLSMPC*YRCSTM Trigger: CATCGTAGAGCACCTGTACCAGCAAGGCATGCTCAG...CAGACCAGCATTACCAAGAGACCCAACCTGCCTAGGCAGAGGCCAGGGAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR TCA 90 bp | CAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCAAGGGACAGCGTGGCTaGGAGAGGGGTGCCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: QLETPLMPGVERCLHLMTKGQRG*ERGALE Trigger: CTCCAGGGCACCCCTCTCTCAGCCACGCTGTCCCTT...GGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR TCA 90 bp | AAGACCTTTGCTGCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTGAGGTGGCAGTAGGGTaGCTTCTCCAAGCCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: KTFAAPSGASVNRMQEQSEVAVG*LLQAQP Trigger: CGGCTGGGCTTGGAGAAGTCACCCTACTGCCACCTC...ACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGCAGCAAAGGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
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| CDS-3UTR TCA 90 bp | TCTGCTGAAGCCAGTCCCTCCACAAAGGCCCATGGGTGGATTACACCTTCTAGAGGCAACTCATCCTTGTaGCTCCACACCCCAGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SAEASPSTKAHGWITPSRGNSSL*LHTPVH Trigger: GTGCACTGGGGTGTGGAGTCACAAGGATGAGTTGCC...TCTAGAAGGTGTAATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
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| CDS-3UTR GCA 90 bp | AGCCTTCCCTGGCCTCTGCCTAGGCAGGTTGGGTCTCTTGGTAATGCTGGTCTGGATGCGTTTCCCATCTaGTGGATTCTGTTCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: SLPWPLPRQVGSLGNAGLDAFPI*WILFHG Trigger: CCCATGGAACAGAATCCAGCAGATGGGAAACGCATC...CAGACCAGCATTACCAAGAGACCCAACCTGCCTAGGCAGAGGCCAGGGAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
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| CDS-3UTR CCA 90 bp | CCACAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGGAGAGAGGGGTGCCCTaGAGAGCTGCACTGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PQLETPLMPGVERCLHLMERGVP*RAALAS Trigger: GCTGGCCAGTGCAGCTCTCCAGGGCACCCCTCTCTC...CATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR TCA 90 bp | CATCACAGTCTGCTGAAGCCAGTCCCTCCACAAAGGCCCATGGGTGGATTACACCGAGAGACGCTGCTGTaGATGTCCTTATGGTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: HHSLLKPVPPQRPMGGLHRETLL*MSLWSE Trigger: TTCCGACCATAAGGACATTCACAGCAGCGTCTCTCG...GTGTAATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGACTGTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR TCA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCAGGGCATGCAAACACTaGGTGGTACCAGCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: APSGASVNRMQEQSSQSPRACKH*VVPALH Trigger: ATGAAGTGCTGGTACCACTCAGTGTTTGCATGCCCT...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
||
| CDS-3UTR GCA 90 bp | CCACAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGTGGCTGAGAGAGGGGTaGCCTGGAGAGCTGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQLETPLMPGVERCLHLMWLREG*PGELHW Trigger: CCAGTGCAGCTCTCCAGGGCACCCCTCTCTCAGCCA...CATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCAACTCCAAGAAGGGCTaGTTGAAGTCCAGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: APSGASVNRMQEQSSQSPNSKKG*LKSRST Trigger: TGTGGACCTGGACTTCAAGCAGCCCTTCTTGGAGTT...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCTTGGAATCTGAGGTCTaGTGTCGCAGGATAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: APSGASVNRMQEQSSQSPLESEV*CRRIGH Trigger: ATGCCCTATCCTGCGACAGCAGACCTCAGATTCCAA...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
||
| CDS-3UTR CCA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCCGAAGTTCCTGTCAATaGCTTTGCCCACTCGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: APSGASVNRMQEQSSQSPRSSCQ*LCPLER Trigger: TCTCTCGAGTGGGCAAAGCCATTGACAGGAACTTCG...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CCA 90 bp | TCTGAGGTCTGCTGTCGCAGGATAGGGCATGCAAACACTGAGTGGTACCAGCACACAGGTGCTCTACGATaGCCATCTGCAGGATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEVCCRRIGHANTEWYQHTGALR*PSAGSA Trigger: AGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGT...GTGCTGGTACCACTCAGTGTTTGCATGCCCTATCCTGCGACAGCAGACCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGAAGCCAGTCCCTCCACAAAGGCCCATGGGTGGATTACACCTTCTAGACAGATCTCCGCCCAGTaGCTGTTGTCTAAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAEASPSTKAHGWITPSRQISAQ*LLSKRW Trigger: CCACCTCTTAGACAACAGCCACTGGGCGGAGATCTG...TCTAGAAGGTGTAATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
||
| CDS-3UTR GCA 90 bp | CCTTGGAATCAGAATATGATGCGTTTCCCATCTGCTGGATTCTGTTCCATGGGATGGCTGAGAGAGGGGTaGCCTGGAGAGCTGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PWNQNMMRFPSAGFCSMGWLREG*PGELHW Trigger: CCAGTGCAGCTCTCCAGGGCACCCCTCTCTCAGCCA...TCCCATGGAACAGAATCCAGCAGATGGGAAACGCATCATATTCTGATTCCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
||
| CDS-3UTR GCA 90 bp | CTAGAATGTTCCTTGGAATCAGAATATGATGCGTTTCCCATCTGCTGGATTCTGCTGAGGGCCTCCAGCTaGTTCTCGGGGCCCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LECSLESEYDAFPICWILLRASS*FSGPPA Trigger: AGCTGGGGGCCCCGAGAAGCAGCTGGAGGCCCTCAG...CAGAATCCAGCAGATGGGAAACGCATCATATTCTGATTCCAAGGAACATTCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
||
| CDS-3UTR GCA 90 bp | CATCACAGTCTGCTGAAGCCAGTCCCTCCACAAAGGCCCATGGGTGGATTACACGGTACCAGCACTTCATaGCCAGCTCTATCTCAATCG | + |
|
Preference number: 4 (lower is better) Translates to: HHSLLKPVPPQRPMGGLHGTSTS*PALSQS Trigger: CGATTGAGATAGAGCTGGGCATGAAGTGCTGGTACC...GTGTAATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGACTGTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
||
| CDS-3UTR CCA 90 bp | CCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCAAGACCTTTGCTAGCTCGGCTCTCAGCTaGCCCACGGAGTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGVERCLHLMTKTFASSALS*PTECSS Trigger: GCTGCTGCACTCCGTGGGCCAGCTGAGAGCCGAGCT...AGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGGCCATCTGCAGGATCTaGTGCTGCTTCTCACGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQLETPLMPGVERCLHLMAICRI*CCFSRE Trigger: CTCCCGTGAGAAGCAGCAGCAGATCCTGCAGATGGC...CATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS-3UTR GCA 90 bp | AAGACCTTTGCTGCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTCCTTGCTGGTACAGGTaGTCTACGATGGCCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTFAAPSGASVNRMQEQSPCWYR*STMAIC Trigger: GCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGG...ACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGCAGCAAAGGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS-3UTR GCA 90 bp | AACACTGAGTGGTACCAGCACTTCATGCCCAGCTCTATCTCAATCGGCAACTCAAGGAGGCGGATAAAGTaGAGCCGGTGCAGCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NTEWYQHFMPSSISIGNSRRRIK*SRCSLN Trigger: GTTCAAGCTGCACCGGCTGCACTTTATCCGCCTCCT...TGAGTTGCCGATTGAGATAGAGCTGGGCATGAAGTGCTGGTACCACTCAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
||
| CDS-3UTR CCA 90 bp | CTAGAATGTTCCTTGGAATCAGAATATGATGCGTTTCCCATCTGCTGGATTCTGGAGAGAGGGGTGCCCTaGAGAGCTGCACTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LECSLESEYDAFPICWILERGVP*RAALAS Trigger: GCTGGCCAGTGCAGCTCTCCAGGGCACCCCTCTCTC...CAGAATCCAGCAGATGGGAAACGCATCATATTCTGATTCCAAGGAACATTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
||
| CDS-3UTR TCA 90 bp | AACACTGAGTGGTACCAGCACTTCATGCCCAGCTCTATCTCAATCGGCAACTCACGAGAGACGCTGCTGTaGATGTCCTTATGGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTEWYQHFMPSSISIGNSRETLL*MSLWSE Trigger: TTCCGACCATAAGGACATTCACAGCAGCGTCTCTCG...TGAGTTGCCGATTGAGATAGAGCTGGGCATGAAGTGCTGGTACCACTCAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGGTACCAGCACTTCATGCCCAGCTCTATCTCAATCGGCAACTCATCCTTGCCACTCGAGAGACGCTaGTGTGAATGTCCTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: EWYQHFMPSSISIGNSSLPLERR*CECPYG Trigger: ACCATAAGGACATTCACAGCAGCGTCTCTCGAGTGG...CAAGGATGAGTTGCCGATTGAGATAGAGCTGGGCATGAAGTGCTGGTACCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| CDS-3UTR GCA 90 bp | AAGACCTTTGCTGCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTTCTACGATGGCCATCTaGAGGATCTGCTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTFAAPSGASVNRMQEQSSTMAI*RICCCF Trigger: GAAGCAGCAGCAGATCCTGCAGATGGCCATCGTAGA...ACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGCAGCAAAGGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGAGGAGGCGGATAAAGTaGAGCCGGTGCAGCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQLETPLMPGVERCLHLMRRRIK*SRCSLN Trigger: GTTCAAGCTGCACCGGCTGCACTTTATCCGCCTCCT...CATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CCA 90 bp | AAGACCTTTGCTGCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTCTGAGCATGCCTTGCTaGTACAGGTGCTCTACGATG | + |
|
Preference number: 4 (lower is better) Translates to: KTFAAPSGASVNRMQEQSLSMPC*YRCSTM Trigger: CATCGTAGAGCACCTGTACCAGCAAGGCATGCTCAG...ACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGCAGCAAAGGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS-3UTR TCA 90 bp | CTAGAATGTTCCTTGGAATCAGAATATGATGCGTTTCCCATCTGCTGGATTCTGAGTGCCGAGCATAGCTaGGGGCCTCCAGCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LECSLESEYDAFPICWILSAEHS*GPPAAS Trigger: AGAAGCAGCTGGAGGCCCTCAGCTATGCTCGGCACT...CAGAATCCAGCAGATGGGAAACGCATCATATTCTGATTCCAAGGAACATTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| CDS-3UTR TCA 90 bp | CCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCAAGACCTTTGCTAAGTGGGGACTCCACTaGAAGTCCCAGGAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGVERCLHLMTKTFAKWGLH*KSQEGA Trigger: TGCTCCCTCCTGGGACTTTCAGTGGAGTCCCCACTT...AGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
||
| CDS-3UTR GCA 90 bp | AAGACCTTTGCTGCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTCCACTCGAGAGACGCTaGTGTGAATGTCCTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KTFAAPSGASVNRMQEQSPLERR*CECPYG Trigger: ACCATAAGGACATTCACAGCAGCGTCTCTCGAGTGG...ACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGCAGCAAAGGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR GCA 90 bp | AAGACCTTTGCTGCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAACTCCAAGAAGGGCTaGTTGAAGTCCAGGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KTFAAPSGASVNRMQEQSNSKKG*LKSRST Trigger: TGTGGACCTGGACTTCAAGCAGCCCTTCTTGGAGTT...ACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGCAGCAAAGGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR GCA 90 bp | CAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCATAAAGTGCAGCCGGTaGAGCTTGAACTCCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLETPLMPGVERCLHLMTIKCSR*SLNSSE Trigger: CTCGCTGGAGTTCAAGCTGCACCGGCTGCACTTTAT...GGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR GCA 90 bp | CAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCGCAGGTACACCAGACTaGCCATCATCACCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QLETPLMPGVERCLHLMTAGTPD*PSSPGS Trigger: AGATCCAGGTGATGATGGGCAGTCTGGTGTACCTGC...GGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
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| CDS-3UTR CCA 90 bp | CAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCCTGCCCATCATCACCTaGATCTCTCTCTGGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLETPLMPGVERCLHLMTLPIIT*ISLWCS Trigger: GCTACACCAGAGAGAGATCCAGGTGATGATGGGCAG...GGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
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| CDS-3UTR GCA 90 bp | CCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCAAGACCTTTGCTTCCTGTCAATGGCTTTaGCCACTCGAGAGACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGVERCLHLMTKTFASCQWL*PLERRC Trigger: GCAGCGTCTCTCGAGTGGGCAAAGCCATTGACAGGA...AGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR GCA 90 bp | CTAGAATGTTCCTTGGAATCAGAATATGATGCGTTTCCCATCTGCTGGATTCTGGCCATCTGCAGGATCTaGTGCTGCTTCTCACGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LECSLESEYDAFPICWILAICRI*CCFSRE Trigger: CTCCCGTGAGAAGCAGCAGCAGATCCTGCAGATGGC...CAGAATCCAGCAGATGGGAAACGCATCATATTCTGATTCCAAGGAACATTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| CDS-3UTR CCA 90 bp | CCACAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGCGAAGTTCCTGTCAATaGCTTTGCCCACTCGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQLETPLMPGVERCLHLMRSSCQ*LCPLER Trigger: TCTCTCGAGTGGGCAAAGCCATTGACAGGAACTTCG...CATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CCA 90 bp | CCACAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGTTCAATGTCGATTCCTaGCACAGCTCCTCCGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: PQLETPLMPGVERCLHLMFNVDS*HSSSAT Trigger: TGTAGCGGAGGAGCTGTGCCAGGAATCGACATTGAA...CATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CCA 90 bp | CAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCTCTCTGGAGATGACGTaGCCACAGATGAGCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QLETPLMPGVERCLHLMTSLEMT*PQMSLM Trigger: CATCAAGCTCATCTGTGGCCACGTCATCTCCAGAGA...GGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
||
| CDS-3UTR GCA 90 bp | CCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCAAGACCTTTGCTATAAAGTGCAGCCGGTaGAGCTTGAACTCCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGVERCLHLMTKTFAIKCSR*SLNSSE Trigger: CTCGCTGGAGTTCAAGCTGCACCGGCTGCACTTTAT...AGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCAAGACCTTTGCTACAGGTGCTCTACGATaGCCATCTGCAGGATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGVERCLHLMTKTFATGALR*PSAGSA Trigger: AGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGT...AGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGGAATCAGAATATGATGCGTTTCCCATCTGCTGGATTCTGTTCCATGGGATTCAATGTCGATTCCTaGCACAGCTCCTCCGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: PWNQNMMRFPSAGFCSMGFNVDS*HSSSAT Trigger: TGTAGCGGAGGAGCTGTGCCAGGAATCGACATTGAA...TCCCATGGAACAGAATCCAGCAGATGGGAAACGCATCATATTCTGATTCCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAAGTTATAAAACAGCATTCAGTTCTAACGGGTTATTTACAGTGGAGAATGAGTGCCGAGCATAGCTaGGGGCCTCCAGCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKVIKQHSVLTGYLQWRMSAEHS*GPPAAS Trigger: AGAAGCAGCTGGAGGCCCTCAGCTATGCTCGGCACT...CATTCTCCACTGTAAATAACCCGTTAGAACTGAATGCTGTTTTATAACTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCAAGACCTTTGCTTCGGAAGCCAGTTTCTaGACTGTGTCTCTGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGVERCLHLMTKTFASEASF*TVSLIF Trigger: GAAGATCAGAGACACAGTCCAGAAACTGGCTTCCGA...AGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS-3UTR TCA 90 bp | CTCAAAGTTATAAAACAGCATTCAGTTCTAACGGGTTATTTACAGTGGAGAATGCCAAGAAGGGCTGCTTaGAGTCCAGGTCCACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKVIKQHSVLTGYLQWRMPRRAA*SPGPHS Trigger: TGAATGTGGACCTGGACTTCAAGCAGCCCTTCTTGG...CATTCTCCACTGTAAATAACCCGTTAGAACTGAATGCTGTTTTATAACTTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS CCA 90 bp | AGAGGGGTGCCCTGGAGAGCTGCACTGGCCAGCTCGGCTCTCAGCTaGCCCACGGAGTGCAGCAGCTCCTCCAGACTCTGCTCGCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: RGVPWRAALASSALS*PTECSSSSRLCSQC Trigger: GCATTGCGAGCAGAGTCTGGAGGAGCTGCTGCACTCCGTGGGCCAGCTGAGAGCCGAGCTGGCCAGTGCAGCTCTCCAGGGCACCCCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS GCA 90 bp | TGCTTCTCGGGGCCCCCAGCTAGGAGGCGGATAAAGTGCAGCCGGTaGAGCTTGAACTCCAGCGAGCTGTTGAGCTCCAGCAGGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CFSGPPARRRIKCSR*SLNSSELLSSSRRC Trigger: GCAGCGCCTGCTGGAGCTCAACAGCTCGCTGGAGTTCAAGCTGCACCGGCTGCACTTTATCCGCCTCCTAGCTGGGGGCCCCGAGAAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS GCA 90 bp | GCCTCCAGCTGCTTCTCGGGGCCCCCAGCTAGGAGGCGGATAAAGTaGAGCCGGTGCAGCTTGAACTCCAGCGAGCTGTTGAGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASSCFSGPPARRRIK*SRCSLNSSELLSSS Trigger: GCTGGAGCTCAACAGCTCGCTGGAGTTCAAGCTGCACCGGCTGCACTTTATCCGCCTCCTAGCTGGGGGCCCCGAGAAGCAGCTGGAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS GCA 90 bp | TGCTGGTACAGGTGCTCTACGATGGCCATCTGCAGGATCTGCTGCTaGTTCTCACGGGAGTCCCACACAGCATCCGAGACCACGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CWYRCSTMAICRICC*FSRESHTASETTPQ Trigger: CTGCGGCGTGGTCTCGGATGCTGTGTGGGACTCCCGTGAGAAGCAGCAGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGTACCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS GCA 90 bp | CCTTGCTGGTACAGGTGCTCTACGATGGCCATCTGCAGGATCTGCTaGTGCTTCTCACGGGAGTCCCACACAGCATCCGAGACCACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PCWYRCSTMAICRIC*CFSRESHTASETTP Trigger: CGGCGTGGTCTCGGATGCTGTGTGGGACTCCCGTGAGAAGCAGCAGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTTCCCTGGCCTCTGCCTAGGCAGGTTGGGTCTCTTGGTAATGCTGGTCTGTGCAGCCGGTGCAGCTaGAACTCCAGCGAGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPWPLPRQVGSLGNAGLCSRCS*NSSELL Trigger: CAACAGCTCGCTGGAGTTCAAGCTGCACCGGCTGCA...CAGACCAGCATTACCAAGAGACCCAACCTGCCTAGGCAGAGGCCAGGGAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
||
| CDS GCA 90 bp | ATGCCTTGCTGGTACAGGTGCTCTACGATGGCCATCTGCAGGATCTaGTGCTGCTTCTCACGGGAGTCCCACACAGCATCCGAGACCACG | + |
|
Preference number: 5 (lower is better) Translates to: MPCWYRCSTMAICRI*CCFSRESHTASETT Trigger: CGTGGTCTCGGATGCTGTGTGGGACTCCCGTGAGAAGCAGCAGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS CCA 90 bp | TCGGAAGCCAGTTTCTGGACTGTGTCTCTGATCTTCCGACAGCACTaGGACATCACAAGGGACAGCGTGGCTGAGAGAGGGGTGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SEASFWTVSLIFRQH*DITRDSVAERGVPW Trigger: CCAGGGCACCCCTCTCTCAGCCACGCTGTCCCTTGTGATGTCCCAGTGCTGTCGGAAGATCAGAGACACAGTCCAGAAACTGGCTTCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS CCA 90 bp | GTCGATTCCTGGCACAGCTCCTCCGCTACACTGAGCATGCCTTGCTaGTACAGGTGCTCTACGATGGCCATCTGCAGGATCTGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: VDSWHSSSATLSMPC*YRCSTMAICRICCC Trigger: GCAGCAGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGGCATGCTCAGTGTAGCGGAGGAGCTGTGCCAGGAATCGAC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CAA 90 bp | CATCACAGTCTGCTGAAGCCAGTCCCTCCACAAAGGCCCATGGGTGGATTACACAACTCCAGCGAGCTGTaGAGCTCCAGCAGGCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: HHSLLKPVPPQRPMGGLHNSSEL*SSSRRC Trigger: GCAGCGCCTGCTGGAGCTCAACAGCTCGCTGGAGTT...GTGTAATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGACTGTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CAA 90 bp | GCTCCGTCAGGGGCAAGTGTAAACAGAATGCAGGAACAGAGTAGCCAGTCCCCCTGCAGCCGGTGCAGCTaGAACTCCAGCGAGCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: APSGASVNRMQEQSSQSPCSRCS*NSSELL Trigger: CAACAGCTCGCTGGAGTTCAAGCTGCACCGGCTGCA...GGGGGACTGGCTACTCTGTTCCTGCATTCTGTTTACACTTGCCCCTGACGGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 90 bp | ACACTGAGCATGCCTTGCTGGTACAGGTGCTCTACGATGGCCATCTaGAGGATCTGCTGCTGCTTCTCACGGGAGTCCCACACAGCATCC | + |
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Preference number: 5 (lower is better) Translates to: TLSMPCWYRCSTMAI*RICCCFSRESHTAS Trigger: GGATGCTGTGTGGGACTCCCGTGAGAAGCAGCAGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGGCATGCTCAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 90 bp | AATGTCGATTCCTGGCACAGCTCCTCCGCTACACTGAGCATGCCTTaGTGGTACAGGTGCTCTACGATGGCCATCTGCAGGATCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: NVDSWHSSSATLSMP*WYRCSTMAICRICC Trigger: GCAGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGGCATGCTCAGTGTAGCGGAGGAGCTGTGCCAGGAATCGACATT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS TCA 90 bp | GGTCCACATTCAATGTCGATTCCTGGCACAGCTCCTCCGCTACACTaGGCATGCCTTGCTGGTACAGGTGCTCTACGATGGCCATCTGCA | + |
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Preference number: 5 (lower is better) Translates to: GPHSMSIPGTAPPLH*ACLAGTGALRWPSA Trigger: TGCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGGCATGCTCAGTGTAGCGGAGGAGCTGTGCCAGGAATCGACATTGAATGTGGACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CAA 90 bp | TCTGCTGAAGCCAGTCCCTCCACAAAGGCCCATGGGTGGATTACACCTTCTAGATTCCTGTCAATGGCTTaGCCCACTCGAGAGACGCTG | + |
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Preference number: 5 (lower is better) Translates to: SAEASPSTKAHGWITPSRFLSMA*PTRETL Trigger: CAGCGTCTCTCGAGTGGGCAAAGCCATTGACAGGAA...TCTAGAAGGTGTAATCCACCCATGGGCCTTTGTGGAGGGACTGGCTTCAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS TCA 90 bp | TGTGAATGTCCTTATGGTCGGAAGCCAGTTTCTGGACTGTGTCTCTaGTCTTCCGACAGCACTGGGACATCACAAGGGACAGCGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: CECPYGRKPVSGLCL*SSDSTGTSQGTAWL Trigger: CAGCCACGCTGTCCCTTGTGATGTCCCAGTGCTGTCGGAAGATCAGAGACACAGTCCAGAAACTGGCTTCCGACCATAAGGACATTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CAA 90 bp | AGCCTTCCCTGGCCTCTGCCTAGGCAGGTTGGGTCTCTTGGTAATGCTGGTCTGCCATTGATGAGTTTGTaGAGTGCATCTCTGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: SLPWPLPRQVGSLGNAGLPLMSL*SASLEM Trigger: CATCTCCAGAGATGCACTCAACAAACTCATCAATGG...CAGACCAGCATTACCAAGAGACCCAACCTGCCTAGGCAGAGGCCAGGGAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
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| CDS TCA 90 bp | CGTGCAGAGCTTCCAAGATCCGATTCAACTCCAAGAAGGGCTGCTTaGAGTCCAGGTCCACATTCAATGTCGATTCCTGGCACAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: RAELPRSDSTPRRAA*SPGPHSMSIPGTAP Trigger: AGGAGCTGTGCCAGGAATCGACATTGAATGTGGACCTGGACTTCAAGCAGCCCTTCTTGGAGTTGAATCGGATCTTGGAAGCTCTGCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 90 bp | TGCTCGTGCAGAGCTTCCAAGATCCGATTCAACTCCAAGAAGGGCTaGTTGAAGTCCAGGTCCACATTCAATGTCGATTCCTGGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: CSCRASKIRFNSKKG*LKSRSTFNVDSWHS Trigger: GCTGTGCCAGGAATCGACATTGAATGTGGACCTGGACTTCAAGCAGCCCTTCTTGGAGTTGAATCGGATCTTGGAAGCTCTGCACGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CAA 90 bp | AGCCTTCCCTGGCCTCTGCCTAGGCAGGTTGGGTCTCTTGGTAATGCTGGTCTGTTTAGCTTTCCTCCATaGATGAGTTTGTTGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLPWPLPRQVGSLGNAGLFSFPP*MSLLSA Trigger: TGCACTCAACAAACTCATCAATGGAGGAAAGCTAAA...CAGACCAGCATTACCAAGAGACCCAACCTGCCTAGGCAGAGGCCAGGGAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
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| CDS-3UTR CAA 90 bp | CCTTGGAATCAGAATATGATGCGTTTCCCATCTGCTGGATTCTGTTCCATGGGATTCCTGTCAATGGCTTaGCCCACTCGAGAGACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PWNQNMMRFPSAGFCSMGFLSMA*PTRETL Trigger: CAGCGTCTCTCGAGTGGGCAAAGCCATTGACAGGAA...TCCCATGGAACAGAATCCAGCAGATGGGAAACGCATCATATTCTGATTCCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| CDS-3UTR CAA 90 bp | CAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCTACACTGAGCATGCCTaGCTGGTACAGGTGCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: QLETPLMPGVERCLHLMTYTEHA*LVQVLY Trigger: GTAGAGCACCTGTACCAGCAAGGCATGCTCAGTGTA...GGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CAA 90 bp | CCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGACCAAGACCTTTGCTTCCAAGAAGGGCTGCTaGAAGTCCAGGTCCACATTC | + |
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Preference number: 5 (lower is better) Translates to: PLMPGVERCLHLMTKTFASKKGC*KSRSTF Trigger: GAATGTGGACCTGGACTTCAAGCAGCCCTTCTTGGA...AGCAAAGGTCTTGGTCATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS-3UTR CAA 90 bp | CCACAGCTGGAAACCCCTTTGATGCCAGGAGTAGAAAGATGTCTGCATTTGATGCCTCCATTGATGAGTTaGTTGAGTGCATCTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PQLETPLMPGVERCLHLMPPLMS*LSASLE Trigger: CTCCAGAGATGCACTCAACAAACTCATCAATGGAGG...CATCAAATGCAGACATCTTTCTACTCCTGGCATCAAAGGGGTTTCCAGCTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
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| CDS-3UTR CAA 90 bp | CTAGAATGTTCCTTGGAATCAGAATATGATGCGTTTCCCATCTGCTGGATTCTGTACACTGAGCATGCCTaGCTGGTACAGGTGCTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LECSLESEYDAFPICWILYTEHA*LVQVLY Trigger: GTAGAGCACCTGTACCAGCAAGGCATGCTCAGTGTA...CAGAATCCAGCAGATGGGAAACGCATCATATTCTGATTCCAAGGAACATTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136020.8 |
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| CDS-3UTR CAA 90 bp | CTCAAAGTTATAAAACAGCATTCAGTTCTAACGGGTTATTTACAGTGGAGAATGAACTCCAGCGAGCTGTaGAGCTCCAGCAGGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKVIKQHSVLTGYLQWRMNSSEL*SSSRRC Trigger: GCAGCGCCTGCTGGAGCTCAACAGCTCGCTGGAGTT...CATTCTCCACTGTAAATAACCCGTTAGAACTGAATGCTGTTTTATAACTTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS CCA 72 bp | CCCTGGAGAGCTGCACTGGCCAGCTCGGCTCTCAGCTaGCCCACGGAGTGCAGCAGCTCCTCCAGACTCTGC | + |
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Preference number: 6 (lower is better) Translates to: PWRAALASSALS*PTECSSSSRLC Trigger: GCAGAGTCTGGAGGAGCTGCTGCACTCCGTGGGCCAGCTGAGAGCCGAGCTGGCCAGTGCAGCTCTCCAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 72 bp | GGGCCCCCAGCTAGGAGGCGGATAAAGTGCAGCCGGTaGAGCTTGAACTCCAGCGAGCTGTTGAGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GPPARRRIKCSR*SLNSSELLSSS Trigger: GCTGGAGCTCAACAGCTCGCTGGAGTTCAAGCTGCACCGGCTGCACTTTATCCGCCTCCTAGCTGGGGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS TCA 72 bp | TCAGCACGGGCAGCGCCACACAGCCAGACGCGAAGCTaGGGAACAGAGCAGAGACTGACGCAGCTGGGATCA | + |
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Preference number: 6 (lower is better) Translates to: SARAAPHSQTRS*GTEQRLTQLGS Trigger: TGATCCCAGCTGCGTCAGTCTCTGCTCTGTTCCTCAGCTTCGCGTCTGGCTGTGTGGCGCTGCCCGTGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147009.2 |
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| CDS GCA 72 bp | TGCTTCTCGGGGCCCCCAGCTAGGAGGCGGATAAAGTaGAGCCGGTGCAGCTTGAACTCCAGCGAGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: CFSGPPARRRIK*SRCSLNSSELL Trigger: CAACAGCTCGCTGGAGTTCAAGCTGCACCGGCTGCACTTTATCCGCCTCCTAGCTGGGGGCCCCGAGAAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS CAA 72 bp | CCAGCTAGGAGGCGGATAAAGTGCAGCCGGTGCAGCTaGAACTCCAGCGAGCTGTTGAGCTCCAGCAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: PARRRIKCSRCS*NSSELLSSSRR Trigger: GCGCCTGCTGGAGCTCAACAGCTCGCTGGAGTTCAAGCTGCACCGGCTGCACTTTATCCGCCTCCTAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 72 bp | AGGTGCTCTACGATGGCCATCTGCAGGATCTGCTGCTaGTTCTCACGGGAGTCCCACACAGCATCCGAGACC | + |
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Preference number: 6 (lower is better) Translates to: RCSTMAICRICC*FSRESHTASET Trigger: GGTCTCGGATGCTGTGTGGGACTCCCGTGAGAAGCAGCAGCAGATCCTGCAGATGGCCATCGTAGAGCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 72 bp | TCCTGGCACAGCTCCTCCGCTACACTGAGCATGCCTTaGTGGTACAGGTGCTCTACGATGGCCATCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SWHSSSATLSMP*WYRCSTMAICR Trigger: CCTGCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGGCATGCTCAGTGTAGCGGAGGAGCTGTGCCAGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 72 bp | TACAGGTGCTCTACGATGGCCATCTGCAGGATCTGCTaGTGCTTCTCACGGGAGTCCCACACAGCATCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: YRCSTMAICRIC*CFSRESHTASE Trigger: CTCGGATGCTGTGTGGGACTCCCGTGAGAAGCAGCAGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 72 bp | TGGTACAGGTGCTCTACGATGGCCATCTGCAGGATCTaGTGCTGCTTCTCACGGGAGTCCCACACAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: WYRCSTMAICRI*CCFSRESHTAS Trigger: GGATGCTGTGTGGGACTCCCGTGAGAAGCAGCAGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGTACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 72 bp | ATGCCTTGCTGGTACAGGTGCTCTACGATGGCCATCTaGAGGATCTGCTGCTGCTTCTCACGGGAGTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: MPCWYRCSTMAI*RICCCFSRESH Trigger: GTGGGACTCCCGTGAGAAGCAGCAGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 72 bp | TCCTCCGCTACACTGAGCATGCCTTGCTGGTACAGGTaGTCTACGATGGCCATCTGCAGGATCTGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSATLSMPCWYR*STMAICRICCC Trigger: GCAGCAGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGGCATGCTCAGTGTAGCGGAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 72 bp | GTGACTTCTCCAAGCCCAGCCGCAGGTACACCAGACTaGCCATCATCACCTGGATCTCTCTCTGGTGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VTSPSPAAGTPD*PSSPGSLSGVA Trigger: GGCTACACCAGAGAGAGATCCAGGTGATGATGGGCAGTCTGGTGTACCTGCGGCTGGGCTTGGAGAAGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001081.10 |
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| CDS CCA 72 bp | TGGCACAGCTCCTCCGCTACACTGAGCATGCCTTGCTaGTACAGGTGCTCTACGATGGCCATCTGCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: WHSSSATLSMPC*YRCSTMAICRI Trigger: GATCCTGCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGGCATGCTCAGTGTAGCGGAGGAGCTGTGCCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS CAA 72 bp | TTCCTGGCACAGCTCCTCCGCTACACTGAGCATGCCTaGCTGGTACAGGTGCTCTACGATGGCCATCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FLAQLLRYTEHA*LVQVLYDGHLQ Trigger: CTGCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGGCATGCTCAGTGTAGCGGAGGAGCTGTGCCAGGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS CAA 90 bp | CAATGTCGATTCCTGGCACAGCTCCTCCGCTACACTGAGCATGCCTaGCTGGTACAGGTGCTCTACGATGGCCATCTGCAGGATCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QCRFLAQLLRYTEHA*LVQVLYDGHLQDLL Trigger: CAGCAGATCCTGCAGATGGCCATCGTAGAGCACCTGTACCAGCAAGGCATGCTCAGTGTAGCGGAGGAGCTGTGCCAGGAATCGACATTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS CCA 72 bp | AGTTTCTGGACTGTGTCTCTGATCTTCCGACAGCACTaGGACATCACAAGGGACAGCGTGGCTGAGAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SFWTVSLIFRQH*DITRDSVAERG Trigger: CCCTCTCTCAGCCACGCTGTCCCTTGTGATGTCCCAGTGCTGTCGGAAGATCAGAGACACAGTCCAGAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 72 bp | ACAGCCCATTCCAGCGCAGGTCCTAGGTCTTGCTCGTaGAGAGCTTCCAAGATCCGATTCAACTCCAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TAHSSAGPRSCS*RASKIRFNSKK Trigger: CTTCTTGGAGTTGAATCGGATCTTGGAAGCTCTGCACGAGCAAGACCTAGGACCTGCGCTGGAATGGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS TCA 72 bp | CCTTATGGTCGGAAGCCAGTTTCTGGACTGTGTCTCTaGTCTTCCGACAGCACTGGGACATCACAAGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: PYGRKPVSGLCL*SSDSTGTSQGT Trigger: TGTCCCTTGTGATGTCCCAGTGCTGTCGGAAGATCAGAGACACAGTCCAGAAACTGGCTTCCGACCATAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS CAA 90 bp | TCGTGCAGAGCTTCCAAGATCCGATTCAACTCCAAGAAGGGCTGCTaGAAGTCCAGGTCCACATTCAATGTCGATTCCTGGCACAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCRASKIRFNSKKGC*KSRSTFNVDSWHSS Trigger: GGAGCTGTGCCAGGAATCGACATTGAATGTGGACCTGGACTTCAAGCAGCCCTTCTTGGAGTTGAATCGGATCTTGGAAGCTCTGCACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS TCA 72 bp | CTTCCAAGATCCGATTCAACTCCAAGAAGGGCTGCTTaGAGTCCAGGTCCACATTCAATGTCGATTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPRSDSTPRRAA*SPGPHSMSIPG Trigger: GCCAGGAATCGACATTGAATGTGGACCTGGACTTCAAGCAGCCCTTCTTGGAGTTGAATCGGATCTTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS CAA 72 bp | GCTTCCAAGATCCGATTCAACTCCAAGAAGGGCTGCTaGAAGTCCAGGTCCACATTCAATGTCGATTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ASKIRFNSKKGC*KSRSTFNVDSW Trigger: CCAGGAATCGACATTGAATGTGGACCTGGACTTCAAGCAGCCCTTCTTGGAGTTGAATCGGATCTTGGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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| CDS GCA 72 bp | AGAGCTTCCAAGATCCGATTCAACTCCAAGAAGGGCTaGTTGAAGTCCAGGTCCACATTCAATGTCGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: RASKIRFNSKKG*LKSRSTFNVDS Trigger: GGAATCGACATTGAATGTGGACCTGGACTTCAAGCAGCCCTTCTTGGAGTTGAATCGGATCTTGGAAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001081.10 ENSMUST00000136020.8 |
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