Pregenerated sensors for RMND5A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002222Ensembl transcript IDs: ENSMUST00000002292.15, ENSMUST00000149415.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCCTCCCTCCACAGGATACTGCCTGGCACGACGCCTTTCTCCTaGAGTCCAGAGGCACCTCTGTTCTTTCCCTGCTTCACAGGGATG | + |
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Preference number: 1 (lower is better) Translates to: PSSLHRILPGTTPFS*SPEAPLFFPCFTGM Trigger: CATCCCTGTGAAGCAGGGAAAGAACAGAGGTGCCTCTGGACTGCAGGAGAAAGGCGTCGTGCCAGGCAGTATCCTGTGGAGGGAGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR TCA 90 bp | CTGAGTCGGCTGACTAAACAGAGTGCAGGCTGTCAGTCCACTGTATaGGAGGCTGCGCTGGGAAACCAGAGGGCTAGTGTAGTCTACCAG | + |
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Preference number: 1 (lower is better) Translates to: LSRLTKQSAGCQSTV*EAALGNQRASVVYQ Trigger: CTGGTAGACTACACTAGCCCTCTGGTTTCCCAGCGCAGCCTCTCATACAGTGGACTGACAGCCTGCACTCTGTTTAGTCAGCCGACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR GCA 90 bp | GGCTCTCCTAGGAAAGCATCACCCAGGCTGGCATACCACTGTGCATaGTCGCAATTTCTGATTAACTTAGCACCAAAGCTGTCGTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: GSPRKASPRLAYHCA*SQFLINLAPKLSSP Trigger: TGGGGACGACAGCTTTGGTGCTAAGTTAATCAGAAATTGCGAGCATGCACAGTGGTATGCCAGCCTGGGTGATGCTTTCCTAGGAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR TCA 90 bp | ACCAGCAGCTTGTACTGTGCAGATAAACCAAGAGCTCTTGGCTTTTaGGAGCCACTGTCCCAAAGGCTGACAGCACTGAGGTGGGAACAA | + |
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Preference number: 1 (lower is better) Translates to: TSSLYCADKPRALGF*EPLSQRLTALRWEQ Trigger: TTGTTCCCACCTCAGTGCTGTCAGCCTTTGGGACAGTGGCTCTCAAAAGCCAAGAGCTCTTGGTTTATCTGCACAGTACAAGCTGCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR TCA 90 bp | ATGACAACTGCTGGTGTTTACTTGATCAGAAACGAAGACCAAGAGTaGAGAAAGCCCTGTGTGATTCCCATCTGGAGCACCCCCTCCGTG | + |
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Preference number: 1 (lower is better) Translates to: MTTAGVYLIRNEDQE*RKPCVIPIWSTPSV Trigger: CACGGAGGGGGTGCTCCAGATGGGAATCACACAGGGCTTTCTTCACTCTTGGTCTTCGTTTCTGATCAAGTAAACACCAGCAGTTGTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR CCA 90 bp | GAGTTTAAGACTGCTACTGACAAGTGTAGGTGTCCACCCATACCATaGAGCGAAGCATGTGCTGTAAGCGAGTCTAGCTGCTTTTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: EFKTATDKCRCPPIP*SEACAVSESSCFCL Trigger: GAGGCAAAAGCAGCTAGACTCGCTTACAGCACATGCTTCGCTCCATGGTATGGGTGGACACCTACACTTGTCAGTAGCAGTCTTAAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR CCA 90 bp | TCCTCCTGCATGCTAGGTAGCATGAGCATGACATCAGTGATGGCATaGTTCCAGAGTACAAGGATCCCAACACTGTATTTCAGCATCTTT | + |
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Preference number: 1 (lower is better) Translates to: SSCMLGSMSMTSVMA*FQSTRIPTLYFSIF Trigger: AAAGATGCTGAAATACAGTGTTGGGATCCTTGTACTCTGGAACCATGCCATCACTGATGTCATGCTCATGCTACCTAGCATGCAGGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR GCA 90 bp | TTTGTCTTCACTGTATACATCCTGGAGATGAACCGAAACAAACCATaGCTCCATACCTTCCCTGAAGATAACCTGAGTCGGCTGACTAAA | + |
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Preference number: 1 (lower is better) Translates to: FVFTVYILEMNRNKP*LHTFPEDNLSRLTK Trigger: TTTAGTCAGCCGACTCAGGTTATCTTCAGGGAAGGTATGGAGGCATGGTTTGTTTCGGTTCATCTCCAGGATGTATACAGTGAAGACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR CCA 90 bp | AGCACCAAAGCTGTCGTCCCCATTCCCTTAACCCAAGTCCGTCTGTaGTTTAAAATAACAAGAGTCACATTTCTCGTTGCTTCTGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: STKAVVPIPLTQVRL*FKITRVTFLVASVF Trigger: AAACACAGAAGCAACGAGAAATGTGACTCTTGTTATTTTAAACCACAGACGGACTTGGGTTAAGGGAATGGGGACGACAGCTTTGGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR CCA 90 bp | GTACACAGTAGCCATCACCATGAAACTGACCACGTGGTCATTTCTTaGGTTTTTCTACAATACCATTCTTTCCCTTACAAGCAAATACCG | + |
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Preference number: 1 (lower is better) Translates to: VHSSHHHETDHVVIS*VFLQYHSFPYKQIP Trigger: CGGTATTTGCTTGTAAGGGAAAGAATGGTATTGTAGAAAAACCCAAGAAATGACCACGTGGTCAGTTTCATGGTGATGGCTACTGTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR GCA 90 bp | CCACACACACAATGTTTGATGCTGGTGCACACACTTCTATACACATaGATAACACTGCGTATCTGTGATGATAAACTAATGAGACACTCA | + |
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Preference number: 1 (lower is better) Translates to: PHTQCLMLVHTLLYT*ITLRICDDKLMRHS Trigger: TGAGTGTCTCATTAGTTTATCATCACAGATACGCAGTGTTATGCATGTGTATAGAAGTGTGTGCACCAGCATCAAACATTGTGTGTGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR CCA 90 bp | AATCACCATATAGAAGTACAAAAACCTGCACTGAATGACAACTGCTaGTGTTTACTTGATCAGAAACGAAGACCAAGAGTGAAGAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: NHHIEVQKPALNDNC*CLLDQKRRPRVKKA Trigger: GGCTTTCTTCACTCTTGGTCTTCGTTTCTGATCAAGTAAACACCAGCAGTTGTCATTCAGTGCAGGTTTTTGTACTTCTATATGGTGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR GCA 90 bp | AAAAATCACCATATAGAAGTACAAAAACCTGCACTGAATGACAACTaGTGGTGTTTACTTGATCAGAAACGAAGACCAAGAGTGAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: KNHHIEVQKPALNDN*WCLLDQKRRPRVKK Trigger: TTTCTTCACTCTTGGTCTTCGTTTCTGATCAAGTAAACACCAGCAGTTGTCATTCAGTGCAGGTTTTTGTACTTCTATATGGTGATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR TCA 90 bp | AGCATTATCTGTAGCCATTTGAATAATATACAGGTTCACAGTCTATaGGATGAGACACTGCAGAAGAGAGGCATGAACAATATACTAATT | + |
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Preference number: 1 (lower is better) Translates to: SIICSHLNNIQVHSL*DETLQKRGMNNILI Trigger: AATTAGTATATTGTTCATGCCTCTCTTCTGCAGTGTCTCATCTCATAGACTGTGAACCTGTATATTATTCAAATGGCTACAGATAATGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR TCA 90 bp | ATGTTCAGATTTACACCAGATGAAATAAAGTTGCGAGATATTTGGTaGTTTCCACATAGCACTCTTCTCAAGATGAAGTATTTCATGGGT | + |
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Preference number: 1 (lower is better) Translates to: MFRFTPDEIKLRDIW*FPHSTLLKMKYFMG Trigger: ACCCATGAAATACTTCATCTTGAGAAGAGTGCTATGTGGAAATCACCAAATATCTCGCAACTTTATTTCATCTGGTGTAAATCTGAACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTAGTGAAGGTGAGAGAAGACATGGTGAAGAGATACATGCACGCTGCAGTCGTCCTGCTTGCCCACTaGGTCTACACGACCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SLVKVREDMVKRYMHAAVVLLAH*VYTTSQ Trigger: CTGGGAGGTCGTGTAGACCCAGTGGGCAAGCAGGAC...GACTGCAGCGTGCATGTATCTCTTCACCATGTCTTCTCTCACCTTCACTAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTAGTGAAGGTGAGAGAAGACATGGTGAAGAGATACATGCACGCTGCAGTCCACTGTATGAGAGGCTaGGCTGGGAAACCAGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SLVKVREDMVKRYMHAAVHCMRG*AGKPEG Trigger: GCCCTCTGGTTTCCCAGCGCAGCCTCTCATACAGTG...GACTGCAGCGTGCATGTATCTCTTCACCATGTCTTCTCTCACCTTCACTAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR GCA 90 bp | TACCACATACAGCTGTCAGCAGGCATGCTTATGAAACACCAAGCCTTGTATGTGACGACGCCTTTCTCCTaGAGTCCAGAGGCACCTCTG | + |
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Preference number: 2 (lower is better) Translates to: YHIQLSAGMLMKHQALYVTTPFS*SPEAPL Trigger: CAGAGGTGCCTCTGGACTGCAGGAGAAAGGCGTCGT...CACATACAAGGCTTGGTGTTTCATAAGCATGCCTGCTGACAGCTGTATGTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR GCA 90 bp | AAGATTGGGGGTCCTCAGCCCCTCATGATTTGGTGTGGGTTTAATGTCTCCCTACAGATGGCATCCTCCTaGATGCTAGGTAGCATGAGC | + |
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Preference number: 2 (lower is better) Translates to: KIGGPQPLMIWCGFNVSLQMASS*MLGSMS Trigger: GCTCATGCTACCTAGCATGCAGGAGGATGCCATCTG...TAGGGAGACATTAAACCCACACCAAATCATGAGGGGCTGAGGACCCCCAATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGACAAGTGTAGGTGTCCACCCATACCATGGAGCGAAGCATGTGCTGTAAGCCAGGTTCACAGTCTATaGGATGAGACACTGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: TDKCRCPPIPWSEACAVSQVHSL*DETLQK Trigger: CTTCTGCAGTGTCTCATCTCATAGACTGTGAACCTG...GCTTACAGCACATGCTTCGCTCCATGGTATGGGTGGACACCTACACTTGTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCCTCATGATTTGGTGTGGGTTTAATGTCTCCCTACACGTTAGCTGCTGTCCTCTGTTCTTTCCCTaGTTCACAGGGATGAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: QPLMIWCGFNVSLHVSCCPLFFP*FTGMRN Trigger: GTTCCTCATCCCTGTGAAGCAGGGAAAGAACAGAGG...ACAGCAGCTAACGTGTAGGGAGACATTAAACCCACACCAAATCATGAGGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGCGGTCGCTTGCTAGCTTCAAGGGTTATGATGAATTCCCACACATGCACACCTGCTTCACAGGGATaGGGAACTTTACAGAGCATC | + |
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Preference number: 2 (lower is better) Translates to: NSGRLLASRVMMNSHTCTPASQG*GTLQSI Trigger: GATGCTCTGTAAAGTTCCTCATCCCTGTGAAGCAGG...TGTGCATGTGTGGGAATTCATCATAACCCTTGAAGCTAGCAAGCGACCGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGAAAAAGATCAACAACAACCTTAGCCACTGTGGAGAGGCTCTGGCTTCAAAGCATCACCCAGGCTaGCATACCACTGTGCATGCT | + |
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Preference number: 2 (lower is better) Translates to: KEKKINNNLSHCGEALASKHHPG*HTTVHA Trigger: AGCATGCACAGTGGTATGCCAGCCTGGGTGATGCTT...TGAAGCCAGAGCCTCTCCACAGTGGCTAAGGTTGTTGTTGATCTTTTTCTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTAGTGAAGGTGAGAGAAGACATGGTGAAGAGATACATGCACGCTGCAGTCTGTCCACCCATACCATaGAGCGAAGCATGTGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: SLVKVREDMVKRYMHAAVCPPIP*SEACAV Trigger: TACAGCACATGCTTCGCTCCATGGTATGGGTGGACA...GACTGCAGCGTGCATGTATCTCTTCACCATGTCTTCTCTCACCTTCACTAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR CAA 90 bp | TACCACATACAGCTGTCAGCAGGCATGCTTATGAAACACCAAGCCTaGTATGTGATTCTCGCTACATGTTTCCTCGGTGTGTTCCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: YHIQLSAGMLMKHQA*YVILATCFLGVFPK Trigger: CTTGGGGAACACACCGAGGAAACATGTAGCGAGAATCACATACAAGGCTTGGTGTTTCATAAGCATGCCTGCTGACAGCTGTATGTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTAGTGAAGGTGAGAGAAGACATGGTGAAGAGATACATGCACGCTGCAGTCAAACAGGCAGCCTGCTaGGCTATAGACAGAACTCAA | + |
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Preference number: 2 (lower is better) Translates to: SLVKVREDMVKRYMHAAVKQAAC*AIDRTQ Trigger: TTGAGTTCTGTCTATAGCCCAGCAGGCTGCCTGTTT...GACTGCAGCGTGCATGTATCTCTTCACCATGTCTTCTCTCACCTTCACTAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR-3UTR CCA 90 bp | AAGATTGGGGGTCCTCAGCCCCTCATGATTTGGTGTGGGTTTAATGTCTCCCTAAACAACTCTTACACATaGCTCTTTCTGGGCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: KIGGPQPLMIWCGFNVSLNNSYT*LFLGSA Trigger: TGCACTGCCCAGAAAGAGCCATGTGTAAGAGTTGTT...TAGGGAGACATTAAACCCACACCAAATCATGAGGGGCTGAGGACCCCCAATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAGATGGCATCCTCCTGCATGCTAGGTAGCATGAGCATGACATCAGTGATGAACGAAGACCAAGAGTaGAGAAAGCCCTGTGTGATT | + |
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Preference number: 2 (lower is better) Translates to: KQMASSCMLGSMSMTSVMNEDQE*RKPCVI Trigger: AATCACACAGGGCTTTCTTCACTCTTGGTCTTCGTT...CATCACTGATGTCATGCTCATGCTACCTAGCATGCAGGAGGATGCCATCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR-3UTR TCA 90 bp | CAAAGTCCTAAGGCAGCCTTGTCCACAACCAGAAAAGGAAATAGGGTCTCAAAGCACACACACAATGTTTaGTGCTGGTGCACACACTTC | + |
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Preference number: 2 (lower is better) Translates to: QSPKAALSTTRKGNRVSKHTHNV*CWCTHF Trigger: GAAGTGTGTGCACCAGCATCAAACATTGTGTGTGTG...CTTTGAGACCCTATTTCCTTTTCTGGTTGTGGACAAGGCTGCCTTAGGACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR CAA 90 bp | ACTGGGTCTACACGACCTCCCAGAGGAAGCTGTAAGGTCAAACACTaGTTAAAGTTTCATGAGCTTCACAAGAGGCCATCAAAGAGATTC | + |
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Preference number: 2 (lower is better) Translates to: TGSTRPPRGSCKVKH*LKFHELHKRPSKRF Trigger: GAATCTCTTTGATGGCCTCTTGTGAAGCTCATGAAACTTTAACAAGTGTTTGACCTTACAGCTTCCTCTGGGAGGTCGTGTAGACCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTAGTGAAGGTGAGAGAAGACATGGTGAAGAGATACATGCACGCTGCAGTCAAAACCTGCACTGAATaGCAACTGCTGGTGTTTACT | + |
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Preference number: 2 (lower is better) Translates to: SLVKVREDMVKRYMHAAVKTCTE*QLLVFT Trigger: AGTAAACACCAGCAGTTGTCATTCAGTGCAGGTTTT...GACTGCAGCGTGCATGTATCTCTTCACCATGTCTTCTCTCACCTTCACTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR-3UTR CCA 90 bp | ACCTTCCCTGAAGATAACCTGAGTCGGCTGACTAAACAGAGTGCAGGCTGTCAGCACGTGGTCATTTCTTaGGTTTTTCTACAATACCAT | + |
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Preference number: 2 (lower is better) Translates to: TFPEDNLSRLTKQSAGCQHVVIS*VFLQYH Trigger: ATGGTATTGTAGAAAAACCCAAGAAATGACCACGTG...CTGACAGCCTGCACTCTGTTTAGTCAGCCGACTCAGGTTATCTTCAGGGAAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGTAAATTTTAAGATCAAGTTTCAGTTCTGGGCCCTTGTCCTGCTTGCCCACTACAAAAACCTGCACTaGATGACAACTGCTGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: MVNFKIKFQFWALVLLAHYKNLH*MTTAGV Trigger: AACACCAGCAGTTGTCATTCAGTGCAGGTTTTTGTA...GTGGGCAAGCAGGACAAGGGCCCAGAACTGAAACTTGATCTTAAAATTTACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACAGATGGCATCCTCCTGCATGCTAGGTAGCATGAGCATGACATCAGTGAGCCTGTTAAATTCATaGTGGGATTTTAAACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: KKQMASSCMLGSMSMTSVSLLNS*WDFKQA Trigger: TGCCTGTTTAAAATCCCATCATGAATTTAACAGGCT...CACTGATGTCATGCTCATGCTACCTAGCATGCAGGAGGATGCCATCTGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGAAAAAGATCAACAACAACCTTAGCCACTGTGGAGAGGCTCTGGCTTCAACCCAAGTCCGTCTGTaGTTTAAAATAACAAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: KEKKINNNLSHCGEALASTQVRL*FKITRV Trigger: GACTCTTGTTATTTTAAACCACAGACGGACTTGGGT...TGAAGCCAGAGCCTCTCCACAGTGGCTAAGGTTGTTGTTGATCTTTTTCTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGTTCCAGAGTACAAGGATCCCAACACTGTATTTCAGCATCTTTGGTCAAGGTTGCGAGATATTTGGTaGTTTCCACATAGCACTCTT | + |
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Preference number: 2 (lower is better) Translates to: MVPEYKDPNTVFQHLWSRLRDIW*FPHSTL Trigger: AAGAGTGCTATGTGGAAATCACCAAATATCTCGCAA...CCTTGACCAAAGATGCTGAAATACAGTGTTGGGATCCTTGTACTCTGGAACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTGATGCTGGTGCACACACTTCTATACACATGCATAACACTGCGTATCTGTGCACTGAATGACAACTaGTGGTGTTTACTTGATCAG | + |
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Preference number: 2 (lower is better) Translates to: CLMLVHTLLYTCITLRICALNDN*WCLLDQ Trigger: CTGATCAAGTAAACACCAGCAGTTGTCATTCAGTGC...ACAGATACGCAGTGTTATGCATGTGTATAGAAGTGTGTGCACCAGCATCAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR-3UTR TCA 90 bp | ATGGTTCCAGAGTACAAGGATCCCAACACTGTATTTCAGCATCTTTGGTCAAGGACAGTTTTCCTATGTTaGTGTTCAGATTTACACCAG | + |
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Preference number: 2 (lower is better) Translates to: MVPEYKDPNTVFQHLWSRTVFLC*CSDLHQ Trigger: CTGGTGTAAATCTGAACATCAACATAGGAAAACTGT...CCTTGACCAAAGATGCTGAAATACAGTGTTGGGATCCTTGTACTCTGGAACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGTTCCAGAGTACAAGGATCCCAACACTGTATTTCAGCATCTTTGGTCAAGGCTGAATGACAACTGCTaGTGTTTACTTGATCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: MVPEYKDPNTVFQHLWSRLNDNC*CLLDQK Trigger: TTTCTGATCAAGTAAACACCAGCAGTTGTCATTCAG...CCTTGACCAAAGATGCTGAAATACAGTGTTGGGATCCTTGTACTCTGGAACCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR-3UTR TCA 90 bp | GGTATCTACTCAATTGTAAATCAGTATGAAAAACTCATGAAGCCTGTACCTGTTCTTGTTAAAGTTTCATaGGCTTCACAAGAGGCCATC | + |
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Preference number: 2 (lower is better) Translates to: GIYSIVNQYEKLMKPVPVLVKVS*ASQEAI Trigger: GATGGCCTCTTGTGAAGCTCATGAAACTTTAACAAG...AACAGGTACAGGCTTCATGAGTTTTTCATACTGATTTACAATTGAGTAGATACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR CCA 72 bp | CGAACGTACACCCTCCTCCCTCCACAGGATACTGCCTaGCACGACGCCTTTCTCCTGCAGTCCAGAGGCACC | + |
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Preference number: 3 (lower is better) Translates to: RTYTLLPPQDTA*HDAFLLQSRGT Trigger: GGTGCCTCTGGACTGCAGGAGAAAGGCGTCGTGCCAGGCAGTATCCTGTGGAGGGAGGAGGGTGTACGTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR GCA 72 bp | CTCCACAGGATACTGCCTGGCACGACGCCTTTCTCCTaGAGTCCAGAGGCACCTCTGTTCTTTCCCTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LHRILPGTTPFS*SPEAPLFFPCF Trigger: GAAGCAGGGAAAGAACAGAGGTGCCTCTGGACTGCAGGAGAAAGGCGTCGTGCCAGGCAGTATCCTGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR-3UTR CAA 90 bp | ACCTTCCCTGAAGATAACCTGAGTCGGCTGACTAAACAGAGTGCAGGCTGTCAGTTCAGTTCTGGGCCCTaGTCCTGCTTGCCCACTGGG | + |
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Preference number: 3 (lower is better) Translates to: TFPEDNLSRLTKQSAGCQFSSGP*SCLPTG Trigger: CCCAGTGGGCAAGCAGGACAAGGGCCCAGAACTGAA...CTGACAGCCTGCACTCTGTTTAGTCAGCCGACTCAGGTTATCTTCAGGGAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| 3UTR TCA 72 bp | TCAGAAACGAAGACCAAGAGTGAAGAAAGCCCTGTGTaGTTCCCATCTGGAGCACCCCCTCCGTGCACACGA | + |
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Preference number: 3 (lower is better) Translates to: SETKTKSEESPV*FPSGAPPPCTR Trigger: TCGTGTGCACGGAGGGGGTGCTCCAGATGGGAATCACACAGGGCTTTCTTCACTCTTGGTCTTCGTTTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| 3UTR CCA 72 bp | TACAGCCTGTGGGATTGGCGACCTAGAGAAGAAGATTaGGGGTCCTCAGCCCCTCATGATTTGGTGTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: YSLWDWRPREED*GSSAPHDLVWV Trigger: AACCCACACCAAATCATGAGGGGCTGAGGACCCCCAATCTTCTTCTCTAGGTCGCCAATCCCACAGGCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR CCA 72 bp | ACTGCTACTGACAAGTGTAGGTGTCCACCCATACCATaGAGCGAAGCATGTGCTGTAAGCGAGTCTAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TATDKCRCPPIP*SEACAVSESSC Trigger: GCAGCTAGACTCGCTTACAGCACATGCTTCGCTCCATGGTATGGGTGGACACCTACACTTGTCAGTAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR GCA 72 bp | ATTTTAAGATCAAGTTTCAGTTCTGGGCCCTTGTCCTaGTTGCCCACTGGGTCTACACGACCTCCCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ILRSSFSSGPLS*LPTGSTRPPRG Trigger: TCCTCTGGGAGGTCGTGTAGACCCAGTGGGCAAGCAGGACAAGGGCCCAGAACTGAAACTTGATCTTAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR CCA 72 bp | GAGAAGAAGATTGGGGGTCCTCAGCCCCTCATGATTTaGTGTGGGTTTAATGTCTCCCTACACGTTAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EKKIGGPQPLMI*CGFNVSLHVSC Trigger: GCAGCTAACGTGTAGGGAGACATTAAACCCACACCAAATCATGAGGGGCTGAGGACCCCCAATCTTCTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR TCA 72 bp | TTGTACTGTGCAGATAAACCAAGAGCTCTTGGCTTTTaGGAGCCACTGTCCCAAAGGCTGACAGCACTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LYCADKPRALGF*EPLSQRLTALR Trigger: CCTCAGTGCTGTCAGCCTTTGGGACAGTGGCTCTCAAAAGCCAAGAGCTCTTGGTTTATCTGCACAGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR GCA 72 bp | AATGTTCAGGCACTAAATCCTACAGAAGCCCACCCCTaGCTGGCAGTGAGGAGTTTAAGACTGCTACTGACA | + |
|
Preference number: 3 (lower is better) Translates to: NVQALNPTEAHP*LAVRSLRLLLT Trigger: TGTCAGTAGCAGTCTTAAACTCCTCACTGCCAGGCAGGGGTGGGCTTCTGTAGGATTTAGTGCCTGAACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR-3UTR CAA 90 bp | GCGCTGGGAAACCAGAGGGCTAGTGTAGTCTACCAGCAGCTTGTACTGTGCAGAGAGTCACATTTCTCGTaGCTTCTGTGTTTATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ALGNQRASVVYQQLVLCRESHFS*LLCLCF Trigger: AAAGCATAAACACAGAAGCAACGAGAAATGTGACTC...TCTGCACAGTACAAGCTGCTGGTAGACTACACTAGCCCTCTGGTTTCCCAGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR TCA 72 bp | GCTGGTGTTTACTTGATCAGAAACGAAGACCAAGAGTaGAGAAAGCCCTGTGTGATTCCCATCTGGAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: AGVYLIRNEDQE*RKPCVIPIWST Trigger: GGTGCTCCAGATGGGAATCACACAGGGCTTTCTTCACTCTTGGTCTTCGTTTCTGATCAAGTAAACACCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| 3UTR-3UTR CAA 90 bp | ACTGACAAGTGTAGGTGTCCACCCATACCATGGAGCGAAGCATGTGCTGTAAGCGAGTCACATTTCTCGTaGCTTCTGTGTTTATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TDKCRCPPIPWSEACAVSESHFS*LLCLCF Trigger: AAAGCATAAACACAGAAGCAACGAGAAATGTGACTC...GCTTACAGCACATGCTTCGCTCCATGGTATGGGTGGACACCTACACTTGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR TCA 72 bp | GGAATACATCCTGAGCATCTGAGCCAGATGATCTGGTaGCTCCTTAGTGAAGGTGAGAGAAGACATGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GIHPEHLSQMIW*LLSEGERRHGE Trigger: TTCACCATGTCTTCTCTCACCTTCACTAAGGAGTCACCAGATCATCTGGCTCAGATGCTCAGGATGTATTCC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR GCA 72 bp | ACTGTATACATCCTGGAGATGAACCGAAACAAACCATaGCTCCATACCTTCCCTGAAGATAACCTGAGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: TVYILEMNRNKP*LHTFPEDNLSR Trigger: CCGACTCAGGTTATCTTCAGGGAAGGTATGGAGGCATGGTTTGTTTCGGTTCATCTCCAGGATGTATACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR CCA 72 bp | ATTTCCATGGTAAATTTTAAGATCAAGTTTCAGTTCTaGGCCCTTGTCCTGCTTGCCCACTGGGTCTACACG | + |
|
Preference number: 3 (lower is better) Translates to: ISMVNFKIKFQF*ALVLLAHWVYT Trigger: CGTGTAGACCCAGTGGGCAAGCAGGACAAGGGCCCAGAACTGAAACTTGATCTTAAAATTTACCATGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR CCA 72 bp | ATGCTAGGTAGCATGAGCATGACATCAGTGATGGCATaGTTCCAGAGTACAAGGATCCCAACACTGTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: MLGSMSMTSVMA*FQSTRIPTLYF Trigger: GAAATACAGTGTTGGGATCCTTGTACTCTGGAACCATGCCATCACTGATGTCATGCTCATGCTACCTAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGATTGGGGGTCCTCAGCCCCTCATGATTTGGTGTGGGTTTAATGTCTCCCTAGAGCAGAGCAAAACATaGAAAAGCTATGCAAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: KIGGPQPLMIWCGFNVSLEQSKT*KSYANL Trigger: CAAATTTGCATAGCTTTTCAATGTTTTGCTCTGCTC...TAGGGAGACATTAAACCCACACCAAATCATGAGGGGCTGAGGACCCCCAATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGTCCTAAGGCAGCCTTGTCCACAACCAGAAAAGGAAATAGGGTCTCAAAGCCACGTGGTCATTTCTaGGGTTTTTCTACAATACCA | + |
|
Preference number: 3 (lower is better) Translates to: QSPKAALSTTRKGNRVSKPRGHF*GFSTIP Trigger: TGGTATTGTAGAAAAACCCAAGAAATGACCACGTGG...CTTTGAGACCCTATTTCCTTTTCTGGTTGTGGACAAGGCTGCCTTAGGACTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR CCA 72 bp | AGCCATCACCATGAAACTGACCACGTGGTCATTTCTTaGGTTTTTCTACAATACCATTCTTTCCCTTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: SHHHETDHVVIS*VFLQYHSFPYK Trigger: CTTGTAAGGGAAAGAATGGTATTGTAGAAAAACCCAAGAAATGACCACGTGGTCAGTTTCATGGTGATGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR CCA 72 bp | CAGTACACAGTAGCCATCACCATGAAACTGACCACGTaGTCATTTCTTGGGTTTTTCTACAATACCATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QYTVAITMKLTT*SFLGFFYNTIL Trigger: AAGAATGGTATTGTAGAAAAACCCAAGAAATGACCACGTGGTCAGTTTCATGGTGATGGCTACTGTGTACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR CCA 72 bp | ATAGAAGTACAAAAACCTGCACTGAATGACAACTGCTaGTGTTTACTTGATCAGAAACGAAGACCAAGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: IEVQKPALNDNC*CLLDQKRRPRV Trigger: CACTCTTGGTCTTCGTTTCTGATCAAGTAAACACCAGCAGTTGTCATTCAGTGCAGGTTTTTGTACTTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| 3UTR GCA 72 bp | CATATAGAAGTACAAAAACCTGCACTGAATGACAACTaGTGGTGTTTACTTGATCAGAAACGAAGACCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HIEVQKPALNDN*WCLLDQKRRPR Trigger: TCTTGGTCTTCGTTTCTGATCAAGTAAACACCAGCAGTTGTCATTCAGTGCAGGTTTTTGTACTTCTATATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| 3UTR GCA 72 bp | CAATGTTTGATGCTGGTGCACACACTTCTATACACATaGATAACACTGCGTATCTGTGATGATAAACTAATG | + |
|
Preference number: 3 (lower is better) Translates to: QCLMLVHTLLYT*ITLRICDDKLM Trigger: CATTAGTTTATCATCACAGATACGCAGTGTTATGCATGTGTATAGAAGTGTGTGCACCAGCATCAAACATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| 3UTR TCA 72 bp | ACCTCACAAAAGAAAAGAGCATTATCTGTAGCCATTTaGATAATATACAGGTTCACAGTCTATGAGATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TSQKKRALSVAI*IIYRFTVYEMR Trigger: TCTCATCTCATAGACTGTGAACCTGTATATTATTCAAATGGCTACAGATAATGCTCTTTTCTTTTGTGAGGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| 3UTR TCA 72 bp | TTTACACCAGATGAAATAAAGTTGCGAGATATTTGGTaGTTTCCACATAGCACTCTTCTCAAGATGAAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: FTPDEIKLRDIW*FPHSTLLKMKY Trigger: ATACTTCATCTTGAGAAGAGTGCTATGTGGAAATCACCAAATATCTCGCAACTTTATTTCATCTGGTGTAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR TCA 72 bp | CAGTTTTCCTATGTTGATGTTCAGATTTACACCAGATaGAATAAAGTTGCGAGATATTTGGTGATTTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: QFSYVDVQIYTR*NKVARYLVIST Trigger: TGTGGAAATCACCAAATATCTCGCAACTTTATTTCATCTGGTGTAAATCTGAACATCAACATAGGAAAACTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR GCA 90 bp | GACCTAGAGAAGAAGATTGGGGGTCCTCAGCCCCTCATGATTTGGTGTGGGTTTCGTTGGCTGTCTGCCTaGCAGCAGCCATCTATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DLEKKIGGPQPLMIWCGFRWLSA*QQPSIP Trigger: GGGAATAGATGGCTGCTGGCAGGCAGACAGCCAACG...AAACCCACACCAAATCATGAGGGGCTGAGGACCCCCAATCTTCTTCTCTAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| 3UTR CAA 72 bp | TTAAGATCAAGTTTCAGTTCTGGGCCCTTGTCCTGCTaGCCCACTGGGTCTACACGACCTCCCAGAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRSSFSSGPLSC*PTGSTRPPRGS Trigger: GCTTCCTCTGGGAGGTCGTGTAGACCCAGTGGGCAAGCAGGACAAGGGCCCAGAACTGAAACTTGATCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR GCA 90 bp | ACTGACAAGTGTAGGTGTCCACCCATACCATGGAGCGAAGCATGTGCTGTAAGCAAGCCGTTGGCTGTCTaGCTGCCAGCAGCCATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TDKCRCPPIPWSEACAVSKPLAV*LPAAIY Trigger: ATAGATGGCTGCTGGCAGGCAGACAGCCAACGGCTT...GCTTACAGCACATGCTTCGCTCCATGGTATGGGTGGACACCTACACTTGTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| CDS-3UTR TCA 90 bp | AACAGCGGTCGCTTGCTAGCTTCAAGGGTTATGATGAATTCCCACACATGCACACGCCACACAACCTGCTaGGAAACTGACACTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSGRLLASRVMMNSHTCTRHTTC*ETDTER Trigger: CCTCTCAGTGTCAGTTTCTCAGCAGGTTGTGTGGCG...TGTGCATGTGTGGGAATTCATCATAACCCTTGAAGCTAGCAAGCGACCGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTCCCTGAAGATAACCTGAGTCGGCTGACTAAACAGAGTGCAGGCTGTCAGCTGTTTGGCATCTCCTaGACTCTGTTCCATTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFPEDNLSRLTKQSAGCQLFGIS*TLFHWA Trigger: TGCCCAATGGAACAGAGTCCAGGAGATGCCAAACAG...CTGACAGCCTGCACTCTGTTTAGTCAGCCGACTCAGGTTATCTTCAGGGAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR TCA 90 bp | ATACCGGCTCTCCTAGGAAAGCATCACCCAGGCTGGCATACCACTGTGCATGCTCAGGCAAATATGGAGTaGTACCAGCACTTTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: IPALLGKHHPGWHTTVHAQANME*YQHFLP Trigger: TGGTAAAAAGTGCTGGTATCACTCCATATTTGCCTG...AGCATGCACAGTGGTATGCCAGCCTGGGTGATGCTTTCCTAGGAGAGCCGGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR TCA 90 bp | ACTGACAAGTGTAGGTGTCCACCCATACCATGGAGCGAAGCATGTGCTGTAAGCTTATCTGTTGTTTGCTaGCGAAGAATGGGACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TDKCRCPPIPWSEACAVSLSVVC*RRMGQA Trigger: TGCCTGTCCCATTCTTCGTCAGCAAACAACAGATAA...GCTTACAGCACATGCTTCGCTCCATGGTATGGGTGGACACCTACACTTGTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR CAA 72 bp | CAGCTGTCAGCAGGCATGCTTATGAAACACCAAGCCTaGTATGTGATTCTCGCTACATGTTTCCTCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLSAGMLMKHQA*YVILATCFLGV Trigger: CACACCGAGGAAACATGTAGCGAGAATCACATACAAGGCTTGGTGTTTCATAAGCATGCCTGCTGACAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR TCA 90 bp | GCGCTGGGAAACCAGAGGGCTAGTGTAGTCTACCAGCAGCTTGTACTGTGCAGACAGGCCTTAGAACTCTaGCTTTTAATGCTTCTAATA | + |
|
Preference number: 4 (lower is better) Translates to: ALGNQRASVVYQQLVLCRQALEL*LLMLLI Trigger: TATTAGAAGCATTAAAAGTCAGAGTTCTAAGGCCTG...TCTGCACAGTACAAGCTGCTGGTAGACTACACTAGCCCTCTGGTTTCCCAGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| CDS-3UTR CCA 90 bp | TACCACATACAGCTGTCAGCAGGCATGCTTATGAAACACCAAGCCTTGTATGTGGACAGACCAGATTCCTaGCAAAGCTCCTCAGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: YHIQLSAGMLMKHQALYVDRPDS*QSSSAT Trigger: TGTAGCTGAGGAGCTTTGCCAGGAATCTGGTCTGTC...CACATACAAGGCTTGGTGTTTCATAAGCATGCCTGCTGACAGCTGTATGTGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| CDS-3UTR CCA 90 bp | TACCACATACAGCTGTCAGCAGGCATGCTTATGAAACACCAAGCCTTGTATGTGCTGTTTGGCATCTCCTaGACTCTGTTCCATTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YHIQLSAGMLMKHQALYVLFGIS*TLFHWA Trigger: TGCCCAATGGAACAGAGTCCAGGAGATGCCAAACAG...CACATACAAGGCTTGGTGTTTCATAAGCATGCCTGCTGACAGCTGTATGTGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR TCA 90 bp | CCATTCTTTCCCTTACAAGCAAATACCGGCTCTCCTAGGAAAGCATCACCCAGGACAAATGGTTCTTTCTaGCTTGGGTCTACAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PFFPLQANTGSPRKASPRTNGSF*LGSTDR Trigger: TCTGTCTGTAGACCCAAGTCAGAAAGAACCATTTGT...CCTGGGTGATGCTTTCCTAGGAGAGCCGGTATTTGCTTGTAAGGGAAAGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| CDS-3UTR TCA 90 bp | AAGAAACAGATGGCATCCTCCTGCATGCTAGGTAGCATGAGCATGACATCAGTGTGTAAGGCTTCTCGCTaGTTTGTAGTTCCACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: KKQMASSCMLGSMSMTSVCKASR*FVVPPI Trigger: AATGGGTGGAACTACAAATCAGCGAGAAGCCTTACA...CACTGATGTCATGCTCATGCTACCTAGCATGCAGGAGGATGCCATCTGTTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCAAAGAAGCCATAGTGCGGCTGTTTCCAATGCCTGTTATCTGTGTGACTTTGCTGACGAAGAATaGGACAGGCAAATATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSQRSHSAAVSNACYLCDFADEE*DRQIWS Trigger: ACTCCATATTTGCCTGTCCCATTCTTCGTCAGCAAA...GTCACACAGATAACAGGCATTGGAAACAGCCGCACTATGGCTTCTTTGAGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR TCA 90 bp | TCACCCAGGCTGGCATACCACTGTGCATGCTCGCAATTTCTGATTAACTTAGCACAGGCAAATATGGAGTaGTACCAGCACTTTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRLAYHCACSQFLINLAQANME*YQHFLP Trigger: TGGTAAAAAGTGCTGGTATCACTCCATATTTGCCTG...TGCTAAGTTAATCAGAAATTGCGAGCATGCACAGTGGTATGCCAGCCTGGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCCTAAGGCAGCCTTGTCCACAACCAGAAAAGGAAATAGGGTCTCAAAGTTATCTGTTGTTTGCTaGCGAAGAATGGGACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSPKAALSTTRKGNRVSKLSVVC*RRMGQA Trigger: TGCCTGTCCCATTCTTCGTCAGCAAACAACAGATAA...CTTTGAGACCCTATTTCCTTTTCTGGTTGTGGACAAGGCTGCCTTAGGACTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR CCA 90 bp | AACAGCGGTCGCTTGCTAGCTTCAAGGGTTATGATGAATTCCCACACATGCACATTTGCTGACGAAGAATaGGACAGGCAAATATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSGRLLASRVMMNSHTCTFADEE*DRQIWS Trigger: ACTCCATATTTGCCTGTCCCATTCTTCGTCAGCAAA...TGTGCATGTGTGGGAATTCATCATAACCCTTGAAGCTAGCAAGCGACCGCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTAGTGAAGGTGAGAGAAGACATGGTGAAGAGATACATGCACGCTGCAGTCATTCAGGGCGTCTCTTaGTATAATATGACCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLVKVREDMVKRYMHAAVIQGVS*YNMTTN Trigger: GTTTGTGGTCATATTATATCAAGAGACGCCCTGAAT...GACTGCAGCGTGCATGTATCTCTTCACCATGTCTTCTCTCACCTTCACTAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTTCCAGAGTACAAGGATCCCAACACTGTATTTCAGCATCTTTGGTCAAGGTCCAAGGAACTGTTTTaGGCTATGAGCATTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MVPEYKDPNTVFQHLWSRSKELF*AMSISR Trigger: CCGAGAAATGCTCATAGCCCAAAACAGTTCCTTGGA...CCTTGACCAAAGATGCTGAAATACAGTGTTGGGATCCTTGTACTCTGGAACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR CCA 90 bp | GGGTCTCAAAGAAGCCATAGTGCGGCTGTTTCCAATGCCTGTTATCTGTGTGACCACAAACCAATTTCATaGGTGGATTGTTATCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSQRSHSAAVSNACYLCDHKPIS*VDCYLL Trigger: CAACAGATAACAATCCACCCATGAAATTGGTTTGTG...GTCACACAGATAACAGGCATTGGAAACAGCCGCACTATGGCTTCTTTGAGACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| 3UTR CAA 72 bp | AATGGACAGGCTTCTTCCCTTCCACACACACAATGTTaGATGCTGGTGCACACACTTCTATACACATGCATA | + |
|
Preference number: 4 (lower is better) Translates to: NGQASSLPHTQC*MLVHTLLYTCI Trigger: TATGCATGTGTATAGAAGTGTGTGCACCAGCATCAAACATTGTGTGTGTGGAAGGGAAGAAGCCTGTCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| CDS-3UTR CCA 90 bp | TGGTCATTTCTTGGGTTTTTCTACAATACCATTCTTTCCCTTACAAGCAAATACTCATTGAGAAGCCGTTaGCTGTCTGCCTGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSFLGFFYNTILSLTSKYSLRSR*LSACQQ Trigger: CTGCTGGCAGGCAGACAGCCAACGGCTTCTCAATGA...GTATTTGCTTGTAAGGGAAAGAATGGTATTGTAGAAAAACCCAAGAAATGACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
||
| CDS-3UTR CCA 90 bp | GCAGGCATGCTTATGAAACACCAAGCCTTGTATGTGATTCTCGCTACATGTTTCTGGGACAGGCAAATATaGAGTGATACCAGCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGMLMKHQALYVILATCFWDRQI*SDTSTF Trigger: AAAAGTGCTGGTATCACTCCATATTTGCCTGTCCCA...GAAACATGTAGCGAGAATCACATACAAGGCTTGGTGTTTCATAAGCATGCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGTAAGGTCAAACACTTGTTAAAGTTTCATGAGCTTCACAAGAGGCCATCATGTAAGGCTTCTCGCTaGTTTGTAGTTCCACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SCKVKHLLKFHELHKRPSCKASR*FVVPPI Trigger: AATGGGTGGAACTACAAATCAGCGAGAAGCCTTACA...TGATGGCCTCTTGTGAAGCTCATGAAACTTTAACAAGTGTTTGACCTTACAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTTCCAGAGTACAAGGATCCCAACACTGTATTTCAGCATCTTTGGTCAAGGTTTAGGGCAAATGGCTaGAAATTTTTCGCATATTGT | + |
|
Preference number: 4 (lower is better) Translates to: MVPEYKDPNTVFQHLWSRFRANG*KFFAYC Trigger: ACAATATGCGAAAAATTTCCAGCCATTTGCCCTAAA...CCTTGACCAAAGATGCTGAAATACAGTGTTGGGATCCTTGTACTCTGGAACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS-3UTR CCA 90 bp | TATGAAAAACTCATGAAGCCTGTACCTGTTTATGGTAAACACTGCAGTACCACATGGGACAGGCAAATATaGAGTGATACCAGCACTTTT | + |
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Preference number: 4 (lower is better) Translates to: YEKLMKPVPVYGKHCSTTWDRQI*SDTSTF Trigger: AAAAGTGCTGGTATCACTCCATATTTGCCTGTCCCA...TGTGGTACTGCAGTGTTTACCATAAACAGGTACAGGCTTCATGAGTTTTTCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS-3UTR CCA 90 bp | ATGGTTCCAGAGTACAAGGATCCCAACACTGTATTTCAGCATCTTTGGTCAAGGAACCAATTTCATGGGTaGATTGTTATCTGTTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: MVPEYKDPNTVFQHLWSRNQFHG*IVICCL Trigger: CAAACAACAGATAACAATCCACCCATGAAATTGGTT...CCTTGACCAAAGATGCTGAAATACAGTGTTGGGATCCTTGTACTCTGGAACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS-3UTR TCA 90 bp | TATGAAAAACTCATGAAGCCTGTACCTGTTTATGGTAAACACTGCAGTACCACAATTCAGGGCGTCTCTTaGTATAATATGACCACAAAC | + |
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Preference number: 4 (lower is better) Translates to: YEKLMKPVPVYGKHCSTTIQGVS*YNMTTN Trigger: GTTTGTGGTCATATTATATCAAGAGACGCCCTGAAT...TGTGGTACTGCAGTGTTTACCATAAACAGGTACAGGCTTCATGAGTTTTTCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS-3UTR CCA 90 bp | TGTCTGTACCACATAAACTTTATGTGTAGTCTAAATGTTATACAGACGCTTGAGTCCAAGGAACTGTTTTaGGCTATGAGCATTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: CLYHINFMCSLNVIQTLESKELF*AMSISR Trigger: CCGAGAAATGCTCATAGCCCAAAACAGTTCCTTGGA...CTCAAGCGTCTGTATAACATTTAGACTACACATAAAGTTTATGTGGTACAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS-3UTR CCA 90 bp | GAGAACAACTCTTACACATGGCTCTTTCTGGGCAGTGCATTAAATGAAGAGACAAACCAATTTCATGGGTaGATTGTTATCTGTTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: ENNSYTWLFLGSALNEETNQFHG*IVICCL Trigger: CAAACAACAGATAACAATCCACCCATGAAATTGGTT...TGTCTCTTCATTTAATGCACTGCCCAGAAAGAGCCATGTGTAAGAGTTGTTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149415.2 |
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| CDS-3UTR CCA 90 bp | GGTATCTACTCAATTGTAAATCAGTATGAAAAACTCATGAAGCCTGTACCTGTTCACAAACCAATTTCATaGGTGGATTGTTATCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: GIYSIVNQYEKLMKPVPVHKPIS*VDCYLL Trigger: CAACAGATAACAATCCACCCATGAAATTGGTTTGTG...AACAGGTACAGGCTTCATGAGTTTTTCATACTGATTTACAATTGAGTAGATACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS CCA 90 bp | CCTTGTCGGAAGAAGTGTTCCACCATGACCTCATTGAGAAGCCGTTaGCTGTCTGCCTGCCAGCAGCCATCTATTCCCACACTGCTAATG | + |
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Preference number: 5 (lower is better) Translates to: PCRKKCSTMTSLRSR*LSACQQPSIPTLLM Trigger: CATTAGCAGTGTGGGAATAGATGGCTGCTGGCAGGCAGACAGCCAACGGCTTCTCAATGAGGTCATGGTGGAACACTTCTTCCGACAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS-3UTR CAA 90 bp | AGTTTCAGTTCTGGGCCCTTGTCCTGCTTGCCCACTGGGTCTACACGACCTCCCTGTCAGCCCACTGGTTaGCATCAAGTAAGTGAACAT | + |
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Preference number: 5 (lower is better) Translates to: SFSSGPLSCLPTGSTRPPCQPTG*HQVSEH Trigger: ATGTTCACTTACTTGATGCAAACCAGTGGGCTGACA...GGGAGGTCGTGTAGACCCAGTGGGCAAGCAGGACAAGGGCCCAGAACTGAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS GCA 90 bp | GAAGAAGTGTTCCACCATGACCTCATTGAGAAGCCGTTGGCTGTCTaGCTGCCAGCAGCCATCTATTCCCACACTGCTAATGTCAGAATC | + |
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Preference number: 5 (lower is better) Translates to: EEVFHHDLIEKPLAV*LPAAIYSHTANVRI Trigger: GATTCTGACATTAGCAGTGTGGGAATAGATGGCTGCTGGCAGGCAGACAGCCAACGGCTTCTCAATGAGGTCATGGTGGAACACTTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS-3UTR CAA 90 bp | ATGGTAAATTTTAAGATCAAGTTTCAGTTCTGGGCCCTTGTCCTGCTTGCCCACCTCATTGAGAAGCCGTaGGCTGTCTGCCTGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: MVNFKIKFQFWALVLLAHLIEKP*AVCLPA Trigger: TGCTGGCAGGCAGACAGCCAACGGCTTCTCAATGAG...GTGGGCAAGCAGGACAAGGGCCCAGAACTGAAACTTGATCTTAAAATTTACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS GCA 90 bp | AAGTGTTCCACCATGACCTCATTGAGAAGCCGTTGGCTGTCTGCCTaGCAGCAGCCATCTATTCCCACACTGCTAATGTCAGAATCAAAA | + |
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Preference number: 5 (lower is better) Translates to: KCSTMTSLRSRWLSA*QQPSIPTLLMSESK Trigger: TTTTGATTCTGACATTAGCAGTGTGGGAATAGATGGCTGCTGGCAGGCAGACAGCCAACGGCTTCTCAATGAGGTCATGGTGGAACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS-3UTR CAA 90 bp | TCACCCAGGCTGGCATACCACTGTGCATGCTCGCAATTTCTGATTAACTTAGCACTGCTATGGATGTCTTaGTGGTCAGAGGCCAACTTC | + |
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Preference number: 5 (lower is better) Translates to: SPRLAYHCACSQFLINLALLWMS*WSEANF Trigger: GAAGTTGGCCTCTGACCACAAAGACATCCATAGCAG...TGCTAAGTTAATCAGAAATTGCGAGCATGCACAGTGGTATGCCAGCCTGGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS-3UTR CAA 90 bp | ACCTTCCCTGAAGATAACCTGAGTCGGCTGACTAAACAGAGTGCAGGCTGTCAGGTGGATTGTTATCTGTaGTTTGCTGACGAAGAATGG | + |
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Preference number: 5 (lower is better) Translates to: TFPEDNLSRLTKQSAGCQVDCYL*FADEEW Trigger: CCATTCTTCGTCAGCAAACAACAGATAACAATCCAC...CTGACAGCCTGCACTCTGTTTAGTCAGCCGACTCAGGTTATCTTCAGGGAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS-3UTR CAA 90 bp | GCAGGCATGCTTATGAAACACCAAGCCTTGTATGTGATTCTCGCTACATGTTTCTACATCCAGCATTCCTaGTCGGAAGAAGTGTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: AGMLMKHQALYVILATCFYIQHS*SEEVFH Trigger: GTGGAACACTTCTTCCGACAAGGAATGCTGGATGTA...GAAACATGTAGCGAGAATCACATACAAGGCTTGGTGTTTCATAAGCATGCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS-3UTR CAA 90 bp | AACAGCGGTCGCTTGCTAGCTTCAAGGGTTATGATGAATTCCCACACATGCACAGTGGATTGTTATCTGTaGTTTGCTGACGAAGAATGG | + |
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Preference number: 5 (lower is better) Translates to: NSGRLLASRVMMNSHTCTVDCYL*FADEEW Trigger: CCATTCTTCGTCAGCAAACAACAGATAACAATCCAC...TGTGCATGTGTGGGAATTCATCATAACCCTTGAAGCTAGCAAGCGACCGCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS CCA 90 bp | CTAATAAAATACAGTCGGTGTAGCTTAAATTCCAAGGAACTGTTTTaGGCTATGAGCATTTCTCGGTTTGATACTGCCCACTCGAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: LIKYSRCSLNSKELF*AMSISRFDTAHSRA Trigger: TGCTCTCGAGTGGGCAGTATCAAACCGAGAAATGCTCATAGCCCAAAACAGTTCCTTGGAATTTAAGCTACACCGACTGTATTTTATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS TCA 90 bp | TTTAATGCTTCTAATATTCTATTTAACTCCACAAATGGTTCTTTCTaGCTTGGGTCTACAGACAGACCAGATTCCTGGCAAAGCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: FNASNILFNSTNGSF*LGSTDRPDSWQSSS Trigger: TGAGGAGCTTTGCCAGGAATCTGGTCTGTCTGTAGACCCAAGTCAGAAAGAACCATTTGTGGAGTTAAATAGAATATTAGAAGCATTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS TCA 90 bp | TTTCTCGGTTTGATACTGCCCACTCGAGAGCAGGCCTTAGAACTCTaGCTTTTAATGCTTCTAATATTCTATTTAACTCCACAAATGGTT | + |
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Preference number: 5 (lower is better) Translates to: FLGLILPTREQALEL*LLMLLIFYLTPQMV Trigger: AACCATTTGTGGAGTTAAATAGAATATTAGAAGCATTAAAAGTCAGAGTTCTAAGGCCTGCTCTCGAGTGGGCAGTATCAAACCGAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS-3UTR CAA 90 bp | GGTATCTACTCAATTGTAAATCAGTATGAAAAACTCATGAAGCCTGTACCTGTTTGTCAGCCCACTGGTTaGCATCAAGTAAGTGAACAT | + |
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Preference number: 5 (lower is better) Translates to: GIYSIVNQYEKLMKPVPVCQPTG*HQVSEH Trigger: ATGTTCACTTACTTGATGCAAACCAGTGGGCTGACA...AACAGGTACAGGCTTCATGAGTTTTTCATACTGATTTACAATTGAGTAGATACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS CAA 72 bp | GAAGAAGTGTTCCACCATGACCTCATTGAGAAGCCGTaGGCTGTCTGCCTGCCAGCAGCCATCTATTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: EEVFHHDLIEKP*AVCLPAAIYSH Trigger: GTGGGAATAGATGGCTGCTGGCAGGCAGACAGCCAACGGCTTCTCAATGAGGTCATGGTGGAACACTTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS CAA 72 bp | ATTCCTTGTCGGAAGAAGTGTTCCACCATGACCTCATaGAGAAGCCGTTGGCTGTCTGCCTGCCAGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: IPCRKKCSTMTS*RSRWLSACQQP Trigger: TGGCTGCTGGCAGGCAGACAGCCAACGGCTTCTCAATGAGGTCATGGTGGAACACTTCTTCCGACAAGGAAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS CAA 90 bp | ACATCCAGCATTCCTTGTCGGAAGAAGTGTTCCACCATGACCTCATaGAGAAGCCGTTGGCTGTCTGCCTGCCAGCAGCCATCTATTCCC | + |
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Preference number: 6 (lower is better) Translates to: TSSIPCRKKCSTMTS*RSRWLSACQQPSIP Trigger: GGGAATAGATGGCTGCTGGCAGGCAGACAGCCAACGGCTTCTCAATGAGGTCATGGTGGAACACTTCTTCCGACAAGGAATGCTGGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS GCA 72 bp | ACCATGACCTCATTGAGAAGCCGTTGGCTGTCTGCCTaGCAGCAGCCATCTATTCCCACACTGCTAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: TMTSLRSRWLSA*QQPSIPTLLMS Trigger: TGACATTAGCAGTGTGGGAATAGATGGCTGCTGGCAGGCAGACAGCCAACGGCTTCTCAATGAGGTCATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS GCA 72 bp | TTCCACCATGACCTCATTGAGAAGCCGTTGGCTGTCTaGCTGCCAGCAGCCATCTATTCCCACACTGCTAAT | + |
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Preference number: 6 (lower is better) Translates to: FHHDLIEKPLAV*LPAAIYSHTAN Trigger: ATTAGCAGTGTGGGAATAGATGGCTGCTGGCAGGCAGACAGCCAACGGCTTCTCAATGAGGTCATGGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS CCA 72 bp | AAGAAGTGTTCCACCATGACCTCATTGAGAAGCCGTTaGCTGTCTGCCTGCCAGCAGCCATCTATTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: KKCSTMTSLRSR*LSACQQPSIPT Trigger: TGTGGGAATAGATGGCTGCTGGCAGGCAGACAGCCAACGGCTTCTCAATGAGGTCATGGTGGAACACTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS CAA 90 bp | TCCTTGTCGGAAGAAGTGTTCCACCATGACCTCATTGAGAAGCCGTaGGCTGTCTGCCTGCCAGCAGCCATCTATTCCCACACTGCTAAT | + |
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Preference number: 6 (lower is better) Translates to: SLSEEVFHHDLIEKP*AVCLPAAIYSHTAN Trigger: ATTAGCAGTGTGGGAATAGATGGCTGCTGGCAGGCAGACAGCCAACGGCTTCTCAATGAGGTCATGGTGGAACACTTCTTCCGACAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS CAA 90 bp | CAGACCAGATTCCTGGCAAAGCTCCTCAGCTACATCCAGCATTCCTaGTCGGAAGAAGTGTTCCACCATGACCTCATTGAGAAGCCGTTG | + |
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Preference number: 6 (lower is better) Translates to: QTRFLAKLLSYIQHS*SEEVFHHDLIEKPL Trigger: CAACGGCTTCTCAATGAGGTCATGGTGGAACACTTCTTCCGACAAGGAATGCTGGATGTAGCTGAGGAGCTTTGCCAGGAATCTGGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS CAA 72 bp | TTCCTGGCAAAGCTCCTCAGCTACATCCAGCATTCCTaGTCGGAAGAAGTGTTCCACCATGACCTCATTGAG | + |
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Preference number: 6 (lower is better) Translates to: FLAKLLSYIQHS*SEEVFHHDLIE Trigger: CTCAATGAGGTCATGGTGGAACACTTCTTCCGACAAGGAATGCTGGATGTAGCTGAGGAGCTTTGCCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS CCA 72 bp | TACAGTCGGTGTAGCTTAAATTCCAAGGAACTGTTTTaGGCTATGAGCATTTCTCGGTTTGATACTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: YSRCSLNSKELF*AMSISRFDTAH Trigger: GTGGGCAGTATCAAACCGAGAAATGCTCATAGCCCAAAACAGTTCCTTGGAATTTAAGCTACACCGACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS CAA 72 bp | GACCACAAACCAATTTCATGGGTGGATTGTTATCTGTaGTTTGCTGACGAAGAATGGGACAGGCAAATATGG | + |
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Preference number: 6 (lower is better) Translates to: DHKPISWVDCYL*FADEEWDRQIW Trigger: CCATATTTGCCTGTCCCATTCTTCGTCAGCAAACAACAGATAACAATCCACCCATGAAATTGGTTTGTGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS CAA 90 bp | ATGCTTCTAATATTCTATTTAACTCCACAAATGGTTCTTTCTGACTaGGGTCTACAGACAGACCAGATTCCTGGCAAAGCTCCTCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: MLLIFYLTPQMVLSD*GLQTDQIPGKAPQL Trigger: TAGCTGAGGAGCTTTGCCAGGAATCTGGTCTGTCTGTAGACCCAAGTCAGAAAGAACCATTTGTGGAGTTAAATAGAATATTAGAAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS CAA 90 bp | AATATGACCACAAACCAATTTCATGGGTGGATTGTTATCTGTTGTTaGCTGACGAAGAATGGGACAGGCAAATATGGAGTGATACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: NMTTNQFHGWIVICC*LTKNGTGKYGVIPA Trigger: TGCTGGTATCACTCCATATTTGCCTGTCCCATTCTTCGTCAGCAAACAACAGATAACAATCCACCCATGAAATTGGTTTGTGGTCATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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| CDS CAA 72 bp | ATATTCTATTTAACTCCACAAATGGTTCTTTCTGACTaGGGTCTACAGACAGACCAGATTCCTGGCAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: IFYLTPQMVLSD*GLQTDQIPGKA Trigger: AGCTTTGCCAGGAATCTGGTCTGTCTGTAGACCCAAGTCAGAAAGAACCATTTGTGGAGTTAAATAGAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS TCA 72 bp | TCTAATATTCTATTTAACTCCACAAATGGTTCTTTCTaGCTTGGGTCTACAGACAGACCAGATTCCTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SNILFNSTNGSF*LGSTDRPDSWQ Trigger: TTGCCAGGAATCTGGTCTGTCTGTAGACCCAAGTCAGAAAGAACCATTTGTGGAGTTAAATAGAATATTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002292.15 |
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| CDS TCA 72 bp | TTTGCTACCATTAAACATTTTATTCAGGGCGTCTCTTaGTATAATATGACCACAAACCAATTTCATGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: FATIKHFIQGVS*YNMTTNQFHGW Trigger: CCACCCATGAAATTGGTTTGTGGTCATATTATATCAAGAGACGCCCTGAATAAAATGTTTAATGGTAGCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002292.15 ENSMUST00000149415.2 |
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