Pregenerated sensors for RMI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037991Ensembl transcript IDs: ENSMUST00000037913.9, ENSMUST00000181721.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGCCTGGGGCTGGGTCAAGCCCAGGACTGTTATTCCTTCCTTCTaGCTCTCAGGACTCCCGTCCACCAGCTGCTCAGCCGTTTGCTTG | + |
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Preference number: 1 (lower is better) Translates to: WAWGWVKPRTVIPSF*LSGLPSTSCSAVCL Trigger: CAAGCAAACGGCTGAGCAGCTGGTGGACGGGAGTCCTGAGAGGCAGAAGGAAGGAATAACAGTCCTGGGCTTGACCCAGCCCCAGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR CCA 90 bp | GAAGAAGGGAAGGCCAGAGAGACTGACTACTGCTGGCTGGCTGGCTaGCTGGCTGGCTGGCTGGCAGGAAGGCAGTCATGCAGAAAGATG | + |
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Preference number: 1 (lower is better) Translates to: EEGKARETDYCWLAG*LAGWLAGRQSCRKM Trigger: CATCTTTCTGCATGACTGCCTTCCTGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCAGTAGTCAGTCTCTCTGGCCTTCCCTTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR GCA 90 bp | CTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCTTCTaGCTCCCTGGGATTAAAGGCGTGCGCTACCACCACCTGGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: LCRPGWPRTQKSACF*LPGIKGVRYHHLAL Trigger: GAGAGCCAGGTGGTGGTAGCGCACGCCTTTAATCCCAGGGAGGCAGAAGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR GCA 90 bp | AACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGTTCTGCCTCCCTGGGATTAAAGGCGTGCGCTACCACCACCTG | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPGWPRTQKSA*FCLPGIKGVRYHHL Trigger: CAGGTGGTGGTAGCGCACGCCTTTAATCCCAGGGAGGCAGAAGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR GCA 90 bp | TGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCAGGAAGGCAGTCATaGAGAAAGATGAATCAGCTGGTAGTCTTTACGTGGGATTGTAGG | + |
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Preference number: 1 (lower is better) Translates to: WLAGWLAGWLAGRQS*RKMNQLVVFTWDCR Trigger: CCTACAATCCCACGTAAAGACTACCAGCTGATTCATCTTTCTGCATGACTGCCTTCCTGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR GCA 90 bp | GGCCCCATCACTTTCCTCCTAGGGCACAGCTGCTTTCCAAGGTGCTaGTGGACCAGGACCTCAAGATATCTGCATCTTGGATCCTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: GPITFLLGHSCFPRC*WTRTSRYLHLGSWA Trigger: TGCCCAGGATCCAAGATGCAGATATCTTGAGGTCCTGGTCCAGCAGCACCTTGGAAAGCAGCTGTGCCCTAGGAGGAAAGTGATGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR GCA 90 bp | GCAGGCCCCATCACTTTCCTCCTAGGGCACAGCTGCTTTCCAAGGTaGTGCTGGACCAGGACCTCAAGATATCTGCATCTTGGATCCTGG | + |
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Preference number: 1 (lower is better) Translates to: AGPITFLLGHSCFPR*CWTRTSRYLHLGSW Trigger: CCAGGATCCAAGATGCAGATATCTTGAGGTCCTGGTCCAGCAGCACCTTGGAAAGCAGCTGTGCCCTAGGAGGAAAGTGATGGGGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR GCA 90 bp | CAGGAGACTGTGGCAGGCCCCATCACTTTCCTCCTAGGGCACAGCTaGTTTCCAAGGTGCTGCTGGACCAGGACCTCAAGATATCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: QETVAGPITFLLGHS*FPRCCWTRTSRYLH Trigger: ATGCAGATATCTTGAGGTCCTGGTCCAGCAGCACCTTGGAAAGCAGCTGTGCCCTAGGAGGAAAGTGATGGGGCCTGCCACAGTCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR TCA 90 bp | TCTGAGCATGCTGATAAGAGCTGTGTCCCTTGCCCCTCCTGCTGGTaGCTAAGTGTTCAGACATGTGAGCCTGCAGGAGACTGTGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SEHADKSCVPCPSCW*LSVQTCEPAGDCGR Trigger: CCTGCCACAGTCTCCTGCAGGCTCACATGTCTGAACACTTAGTCACCAGCAGGAGGGGCAAGGGACACAGCTCTTATCAGCATGCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR CCA 90 bp | GGAACATGCACGCTGAAGGACTTTGTGTGCTTCCCAGTGTCGCACTaGAGACTGCTTCTGAGCATGCTGATAAGAGCTGTGTCCCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: GTCTLKDFVCFPVSH*RLLLSMLIRAVSLA Trigger: GGCAAGGGACACAGCTCTTATCAGCATGCTCAGAAGCAGTCTCCAGTGCGACACTGGGAAGCACACAAAGTCCTTCAGCGTGCATGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR TCA 90 bp | TCCCAGTTAACCAGAGGCAGGAAGATGGGAAATCTGAGGTTGGCCTaGGCTACAAACTGGGCTCAAGGCCTCGATGCTTTTTCTAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: SQLTRGRKMGNLRLA*ATNWAQGLDAFSRG Trigger: CCCCCTAGAAAAAGCATCGAGGCCTTGAGCCCAGTTTGTAGCTCAGGCCAACCTCAGATTTCCCATCTTCCTGCCTCTGGTTAACTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR CCA 90 bp | CAAGGGGCAACCAGCAAAGAAAGGGGAGCTGTGCTTATGCTGATGTaGGTAGGAACATGCACGCTGAAGGACTTTGTGTGCTTCCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: QGATSKERGAVLMLM*VGTCTLKDFVCFPV Trigger: CACTGGGAAGCACACAAAGTCCTTCAGCGTGCATGTTCCTACCCACATCAGCATAAGCACAGCTCCCCTTTCTTTGCTGGTTGCCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR GCA 90 bp | GTACATTGGAGCTGGAGAGATGGCTCAGCAATTAAGAGCACTTGCTaGTCTTCCAGAGGACCTGAGTTTGGTTCCCAGAACCCACACAGG | + |
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Preference number: 1 (lower is better) Translates to: VHWSWRDGSAIKSTC*SSRGPEFGSQNPHR Trigger: CCTGTGTGGGTTCTGGGAACCAAACTCAGGTCCTCTGGAAGAGCAGCAAGTGCTCTTAATTGCTGAGCCATCTCTCCAGCTCCAATGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR TCA 90 bp | ATATCTGCATCTTGGATCCTGGGCATAGTCAGCTTTCAGGCAAACTaGCTCCCAACTCCAGCATGCTGCACAATGCAGGTAGGAGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: ISASWILGIVSFQAN*LPTPACCTMQVGGF Trigger: GAACCCTCCTACCTGCATTGTGCAGCATGCTGGAGTTGGGAGTCAGTTTGCCTGAAAGCTGACTATGCCCAGGATCCAAGATGCAGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR GCA 90 bp | AACGTACATTGGAGCTGGAGAGATGGCTCAGCAATTAAGAGCACTTaGTGCTCTTCCAGAGGACCTGAGTTTGGTTCCCAGAACCCACAC | + |
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Preference number: 1 (lower is better) Translates to: NVHWSWRDGSAIKST*CSSRGPEFGSQNPH Trigger: GTGTGGGTTCTGGGAACCAAACTCAGGTCCTCTGGAAGAGCAGCAAGTGCTCTTAATTGCTGAGCCATCTCTCCAGCTCCAATGTACGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR GCA 90 bp | ACAGCTGCTTTCCAAGGTGCTGCTGGACCAGGACCTCAAGATATCTaGATCTTGGATCCTGGGCATAGTCAGCTTTCAGGCAAACTGACT | + |
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Preference number: 1 (lower is better) Translates to: TAAFQGAAGPGPQDI*ILDPGHSQLSGKLT Trigger: AGTCAGTTTGCCTGAAAGCTGACTATGCCCAGGATCCAAGATGCAGATATCTTGAGGTCCTGGTCCAGCAGCACCTTGGAAAGCAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR GCA 90 bp | CTTATGCTGATGTGGGTAGGAACATGCACGCTGAAGGACTTTGTGTaGTTCCCAGTGTCGCACTGGAGACTGCTTCTGAGCATGCTGATA | + |
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Preference number: 1 (lower is better) Translates to: LMLMWVGTCTLKDFV*FPVSHWRLLLSMLI Trigger: TATCAGCATGCTCAGAAGCAGTCTCCAGTGCGACACTGGGAAGCACACAAAGTCCTTCAGCGTGCATGTTCCTACCCACATCAGCATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR CCA 90 bp | CCCGTAATCTCAACGGGCTGGAGGGGAGGGAAGAGAGTCATGAGCTaGAGACTACCTGAGCTATATAAGACCCTGTCTTTAAGACAAACA | + |
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Preference number: 1 (lower is better) Translates to: PVISTGWRGGKRVMS*RLPELYKTLSLRQT Trigger: TGTTTGTCTTAAAGACAGGGTCTTATATAGCTCAGGTAGTCTCCAGCTCATGACTCTCTTCCCTCCCCTCCAGCCCGTTGAGATTACGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR GCA 90 bp | ACTGTTATTCCTTCCTTCTGCCTCTCAGGACTCCCGTCCACCAGCTaGTCAGCCGTTTGCTTGTATATCCTTATCTGCATCAGTCTTGTT | + |
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Preference number: 1 (lower is better) Translates to: TVIPSFCLSGLPSTS*SAVCLYILICISLV Trigger: AACAAGACTGATGCAGATAAGGATATACAAGCAAACGGCTGAGCAGCTGGTGGACGGGAGTCCTGAGAGGCAGAAGGAAGGAATAACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR CCA 90 bp | TACAGAAAGGAGGCCAGGACTCTAAGCCTACAGGCTGTTCCACCTTaGATGTCTCTCCACAACAGTTTTGAAGCAGAAGTGCTTGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: YRKEARTLSLQAVPP*MSLHNSFEAEVLEK Trigger: CTTTTCAAGCACTTCTGCTTCAAAACTGTTGTGGAGAGACATCCAAGGTGGAACAGCCTGTAGGCTTAGAGTCCTGGCCTCCTTTCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR TCA 90 bp | TCAAGGAGAAAGTGTTATCATTCGAAGAACCAGGAAATGACAACATaGGCTTTCCACGAGCTTCAGCAAGAGAAAGGCACACTTTCGCGC | + |
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Preference number: 1 (lower is better) Translates to: SRRKCYHSKNQEMTT*AFHELQQEKGTLSR Trigger: GCGCGAAAGTGTGCCTTTCTCTTGCTGAAGCTCGTGGAAAGCTCATGTTGTCATTTCCTGGTTCTTCGAATGATAACACTTTCTCCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR TCA 90 bp | AAAAGTCTGTCTCCATCTTGGATTTTTAAGTTCAACAGAGAATTGTaGGAATTCCCACCATTCTCAACAGCTGGCCTCAGCTTCAGTATG | + |
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Preference number: 1 (lower is better) Translates to: KSLSPSWIFKFNREL*EFPPFSTAGLSFSM Trigger: CATACTGAAGCTGAGGCCAGCTGTTGAGAATGGTGGGAATTCTCACAATTCTCTGTTGAACTTAAAAATCCAAGATGGAGACAGACTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR CCA 90 bp | AGGCCACTATGCCATTCTGTCCTCACATCTGTAATTTTAATCCATTaGCAACAAACTGAAATTCAGAGGTATGGTCAAGGAGAAAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: RPLCHSVLTSVILIH*QQTEIQRYGQGESV Trigger: AACACTTTCTCCTTGACCATACCTCTGAATTTCAGTTTGTTGCCAATGGATTAAAATTACAGATGTGAGGACAGAATGGCATAGTGGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR CCA 90 bp | ATGTGTTTGCTTAACACATACACAGCCTCAGCTTCAGTGTGCTTATaGAAACACTTTCTGTTCATTCTTTCCAAAAACCTAAAACTGTTT | + |
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Preference number: 1 (lower is better) Translates to: MCLLNTYTASASVCL*KHFLFILSKNLKLF Trigger: AAACAGTTTTAGGTTTTTGGAAAGAATGAACAGAAAGTGTTTCCATAAGCACACTGAAGCTGAGGCTGTGTATGTGTTAAGCAAACACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGTTTTCCAGGGGCCAGAAGGCGGCGTCAGATGCCTAGGAACTACAGGGAGTCCACACTCTGGAGGCTaGAGCAGGAGGCCTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: RVFQGPEGGVRCLGTTGSPHSGG*SRRPAT Trigger: TGTGGCAGGCCTCCTGCTGCAGCCTCCAGAGTGTGG...ACTCCCTGTAGTTCCTAGGCATCTGACGCCGCCTTCTGGCCCCTGGAAAACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTGCTCTTCCAGAGGACCTGAGTTTGGTTCCCAGAACCCACACAGGGATGGGCTGGCTGGCTGGCTaGCTGGCAGGAAGGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LAALPEDLSLVPRTHTGMGWLAG*LAGRQS Trigger: TGACTGCCTTCCTGCCAGCCAGCCAGCCAGCCAGCC...CATCCCTGTGTGGGTTCTGGGAACCAAACTCAGGTCCTCTGGAAGAGCAGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGACACAGTAGTGCACACCCGTAATCTCAACGGGCTGGAGGGGAGGGAAGAGGTTGGCAATAGCTGGTaGTGGGAGGCAGGCCACTAT | + |
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Preference number: 2 (lower is better) Translates to: ADTVVHTRNLNGLEGREEVGNSW*WEAGHY Trigger: ATAGTGGCCTGCCTCCCATCACCAGCTATTGCCAAC...CTCTTCCCTCCCCTCCAGCCCGTTGAGATTACGGGTGTGCACTACTGTGTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR GCA 90 bp | CCCCATCACTTTCCTCCTAGGGCACAGCTGCTTTCCAAGGTGCTGCTGGACCAGCTCCCAACTCCAGCATaGTGCACAATGCAGGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: PHHFPPRAQLLSKVLLDQLPTPA*CTMQVG Trigger: TCCTACCTGCATTGTGCAGCATGCTGGAGTTGGGAG...CTGGTCCAGCAGCACCTTGGAAAGCAGCTGTGCCCTAGGAGGAAAGTGATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGATGGGAAATCTGAGGTTGGCCTGAGCTACAAACTGGGCTCAAGGCCTCGAGCTTGCAGGAAGCCCTaGGTTCCATCCCCAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: EDGKSEVGLSYKLGSRPRACRKP*VPSPAL Trigger: CAGTGCTGGGGATGGAACCCAGGGCTTCCTGCAAGC...TCGAGGCCTTGAGCCCAGTTTGTAGCTCAGGCCAACCTCAGATTTCCCATCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR CCA 90 bp | GTAGGAACATGCACGCTGAAGGACTTTGTGTGCTTCCCAGTGTCGCACTGGAGAGCCTGCAGGAGACTGTaGCAGGCCCCATCACTTTCC | + |
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Preference number: 2 (lower is better) Translates to: VGTCTLKDFVCFPVSHWRACRRL*QAPSLS Trigger: GGAAAGTGATGGGGCCTGCCACAGTCTCCTGCAGGC...TCTCCAGTGCGACACTGGGAAGCACACAAAGTCCTTCAGCGTGCATGTTCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGATGGGAAATCTGAGGTTGGCCTGAGCTACAAACTGGGCTCAAGGCCTCGAGCTTTTTCTAGGGGGTaGAGGGCAGGAAGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: EDGKSEVGLSYKLGSRPRAFSRG*RAGRRQ Trigger: CTGCCTCCTTCCTGCCCTCCACCCCCTAGAAAAAGC...TCGAGGCCTTGAGCCCAGTTTGTAGCTCAGGCCAACCTCAGATTTCCCATCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTGCTCTTCCAGAGGACCTGAGTTTGGTTCCCAGAACCCACACAGGGATGCCTAAAAAGGTAGGGTaGGGAAGGCAGGGTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LAALPEDLSLVPRTHTGMPKKVG*GRQGEE Trigger: CTCCTCACCCTGCCTTCCCCACCCTACCTTTTTAGG...CATCCCTGTGTGGGTTCTGGGAACCAAACTCAGGTCCTCTGGAAGAGCAGCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR CAA 90 bp | ATGAGAGCAAGCTGTCAGCAAGGGGCTGGTACCTGTCCCTACAAGTaGGCAATAGCTGGTGATGGGAGGCAGGCCACTATGCCATTCTGT | + |
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Preference number: 2 (lower is better) Translates to: MRASCQQGAGTCPYK*AIAGDGRQATMPFC Trigger: ACAGAATGGCATAGTGGCCTGCCTCCCATCACCAGCTATTGCCAACTTGTAGGGACAGGTACCAGCCCCTTGCTGACAGCTTGCTCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR CAA 90 bp | GGCAGGAAGGAGGCAGGTCTAGATCACCTGAGTCCTCATCCTCTCTaGTCCCTCGATGTCCATCTCCTGCCAGGTGACTCCTTAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: GRKEAGLDHLSPHPL*SLDVHLLPGDSLAF Trigger: AAAAGCTAAGGAGTCACCTGGCAGGAGATGGACATCGAGGGACAAGAGAGGATGAGGACTCAGGTGATCTAGACCTGCCTCCTTCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGTAGTGCACACCCGTAATCTCAACGGGCTGGAGGGGAGGGAAGAGAGTCATACCATTCTCAACAGCTaGCCTCAGCTTCAGTATGAG | + |
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Preference number: 2 (lower is better) Translates to: TVVHTRNLNGLEGREESHTILNS*PQLQYE Trigger: CTCATACTGAAGCTGAGGCCAGCTGTTGAGAATGGT...ATGACTCTCTTCCCTCCCCTCCAGCCCGTTGAGATTACGGGTGTGCACTACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGTCATGCAGAAAGATGAATCAGCTGGTAGTCTTTACGTGGGATTGTAGGGAGGGAAGAGAGTCATaGGCTGGAGACTACCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: RQSCRKMNQLVVFTWDCREGRES*AGDYLS Trigger: GCTCAGGTAGTCTCCAGCTCATGACTCTCTTCCCTC...CCTACAATCCCACGTAAAGACTACCAGCTGATTCATCTTTCTGCATGACTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGGAAGATGGGAAATCTGAGGTTGGCCTGAGCTACAAACTGGGCTCAAGGAATAGGAATCTAGCCTaGGTTGTCAGCAGAAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RQEDGKSEVGLSYKLGSRNRNLA*VVSRKP Trigger: TGGCTTTCTGCTGACAACCCAGGCTAGATTCCTATT...CCTTGAGCCCAGTTTGTAGCTCAGGCCAACCTCAGATTTCCCATCTTCCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR CAA 90 bp | ATTTTAGGCTGGAAATGTGGCTCAGTAATACAGTGTTTGCTTAGCTaGCAGGAAGCCCTGGGTTCCATCCCCAGCACTGCAGACACAGTA | + |
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Preference number: 2 (lower is better) Translates to: ILGWKCGSVIQCLLS*QEALGSIPSTADTV Trigger: TACTGTGTCTGCAGTGCTGGGGATGGAACCCAGGGCTTCCTGCAAGCTAAGCAAACACTGTATTACTGAGCCACATTTCCAGCCTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTGCTCTTCCAGAGGACCTGAGTTTGGTTCCCAGAACCCACACAGGGATGTTCAACAGAGAATTGTaGGAATTCCCACCATTCTCA | + |
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Preference number: 2 (lower is better) Translates to: LAALPEDLSLVPRTHTGMFNREL*EFPPFS Trigger: TGAGAATGGTGGGAATTCTCACAATTCTCTGTTGAA...CATCCCTGTGTGGGTTCTGGGAACCAAACTCAGGTCCTCTGGAAGAGCAGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCTACATAATGAGTTCCAGGAAAGCCCAAGTTCAAGGCCAGTCTGAACTATTCCATCCCCAGCACTaGAGACACAGTAGTGCACAC | + |
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Preference number: 2 (lower is better) Translates to: LLYIMSSRKAQVQGQSELFHPQH*RHSSAH Trigger: GTGTGCACTACTGTGTCTGCAGTGCTGGGGATGGAA...TAGTTCAGACTGGCCTTGAACTTGGGCTTTCCTGGAACTCATTATGTAGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCTACATAATGAGTTCCAGGAAAGCCCAAGTTCAAGGCCAGTCTGAACTAAAATCCGCCTGCTTCTaGCTCCCTGGGATTAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LLYIMSSRKAQVQGQSELKSACF*LPGIKG Trigger: GCCTTTAATCCCAGGGAGGCAGAAGCAGGCGGATTT...TAGTTCAGACTGGCCTTGAACTTGGGCTTTCCTGGAACTCATTATGTAGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCCTACAGCAAGACTGTAACATAAGATGGCCTGCTGGGTCTTTGCCATCCCCATTGGCAACAAACTaGAATTCAGAGGTATGGTCA | + |
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Preference number: 2 (lower is better) Translates to: RVLQQDCNIRWPAGSLPSPLATN*NSEVWS Trigger: TGACCATACCTCTGAATTTCAGTTTGTTGCCAATGG...GGATGGCAAAGACCCAGCAGGCCATCTTATGTTACAGTCTTGCTGTAGGACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTCAGCTTCAGTGTGCTTATGGAAACACTTTCTGTTCATTCTTTCCAAAAACGAAGGCAGGGAGGAGTaGCTTAGACAACCGAGGATC | + |
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Preference number: 2 (lower is better) Translates to: ASASVCLWKHFLFILSKNEGREE*LRQPRI Trigger: GATCCTCGGTTGTCTAAGCCACTCCTCCCTGCCTTC...GTTTTTGGAAAGAATGAACAGAAAGTGTTTCCATAAGCACACTGAAGCTGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGAGACTACCTGAGCTATATAAGACCCTGTCTTTAAGACAAACAGATAGTCGAAGAACCAGGAAATaGCAACATGAGCTTTCCACG | + |
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Preference number: 2 (lower is better) Translates to: SWRLPELYKTLSLRQTDSRRTRK*QHELST Trigger: CGTGGAAAGCTCATGTTGTCATTTCCTGGTTCTTCG...ACTATCTGTTTGTCTTAAAGACAGGGTCTTATATAGCTCAGGTAGTCTCCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGAGACTACCTGAGCTATATAAGACCCTGTCTTTAAGACAAACAGATAGTGGCCTGCTGGGTCTTTaGCATCCAAATAGGAATCTA | + |
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Preference number: 2 (lower is better) Translates to: SWRLPELYKTLSLRQTDSGLLGL*HPNRNL Trigger: TAGATTCCTATTTGGATGGCAAAGACCCAGCAGGCC...ACTATCTGTTTGTCTTAAAGACAGGGTCTTATATAGCTCAGGTAGTCTCCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR GCA 90 bp | CTCAAGATTCCAAGGTCCTCTTTTAGACTCACACACACACAAATAAAAATAGACGCCTCAGCTTCAGTGTaGTTATGGAAACACTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LKIPRSSFRLTHTQIKIDASASV*LWKHFL Trigger: CAGAAAGTGTTTCCATAAGCACACTGAAGCTGAGGC...GTCTATTTTTATTTGTGTGTGTGTGAGTCTAAAAGAGGACCTTGGAATCTTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGAGACTACCTGAGCTATATAAGACCCTGTCTTTAAGACAAACAGATAGTAGTCTGTCTCCATCTTaGATTTTTAAGTTCAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: SWRLPELYKTLSLRQTDSSLSPS*IFKFNR Trigger: TCTGTTGAACTTAAAAATCCAAGATGGAGACAGACT...ACTATCTGTTTGTCTTAAAGACAGGGTCTTATATAGCTCAGGTAGTCTCCAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR CCA 72 bp | AAGAAGGGAAGGCCAGAGAGACTGACTACTGCTGGCTaGCTGGCTGGCTGGCTGGCTGGCTGGCAGGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KKGRPERLTTAG*LAGWLAGWQEG Trigger: GCCTTCCTGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCAGTAGTCAGTCTCTCTGGCCTTCCCTTCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCTTCTaGCTCCCTGGGATTAAAGGCGTGCGCTACCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPRTQKSACF*LPGIKGVRYHH Trigger: GTGGTGGTAGCGCACGCCTTTAATCCCAGGGAGGCAGAAGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR GCA 72 bp | GGCTGGGTCAAGCCCAGGACTGTTATTCCTTCCTTCTaGCTCTCAGGACTCCCGTCCACCAGCTGCTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GWVKPRTVIPSF*LSGLPSTSCSA Trigger: GGCTGAGCAGCTGGTGGACGGGAGTCCTGAGAGGCAGAAGGAAGGAATAACAGTCCTGGGCTTGACCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR CCA 72 bp | AGCTGGTCGAGTGCTACTCTGGCGTGTGTGAGACCCTaGGGACCCCGTGGTCCAACCCCAGTGCCATTCATT | + |
|
Preference number: 3 (lower is better) Translates to: SWSSATLACVRP*GPRGPTPVPFI Trigger: AATGAATGGCACTGGGGTTGGACCACGGGGTCCCCAGGGTCTCACACACGCCAGAGTAGCACTCGACCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCGAGTGCTACTCTGGCGTGTGTGAGACCCTGGGGACCCCGTGGTCCAACCACCTGTCCCTACAAGTaGGCAATAGCTGGTGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: WSSATLACVRPWGPRGPTTCPYK*AIAGDG Trigger: CCCATCACCAGCTATTGCCAACTTGTAGGGACAGGT...GGTTGGACCACGGGGTCCCCAGGGTCTCACACACGCCAGAGTAGCACTCGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR GCA 72 bp | GTGGCAGGCCCCATCACTTTCCTCCTAGGGCACAGCTaGTTTCCAAGGTGCTGCTGGACCAGGACCTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VAGPITFLLGHS*FPRCCWTRTSR Trigger: TCTTGAGGTCCTGGTCCAGCAGCACCTTGGAAAGCAGCTGTGCCCTAGGAGGAAAGTGATGGGGCCTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR CCA 72 bp | CAGGACAGCCAGGACTACACTGAGAAACCCTGGGCCTaGGGCTGGGTCAAGCCCAGGACTGTTATTCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QDSQDYTEKPWA*GWVKPRTVIPS Trigger: GGAAGGAATAACAGTCCTGGGCTTGACCCAGCCCCAGGCCCAGGGTTTCTCAGTGTAGTCCTGGCTGTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGTTCTGCCTCCCTGGGATTAAAGGCGTGCGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*FCLPGIKGVRY Trigger: GTAGCGCACGCCTTTAATCCCAGGGAGGCAGAAGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCCCAGAACCCACACAGGGATGCTCAGACCTGCTGTAACCCCAGCTCAAGACAGTGTTTGCTTAGCTaGCAGGAAGCCCTGGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSQNPHRDAQTCCNPSSRQCLLS*QEALGS Trigger: GGAACCCAGGGCTTCCTGCAAGCTAAGCAAACACTG...TCTTGAGCTGGGGTTACAGCAGGTCTGAGCATCCCTGTGTGGGTTCTGGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGCCTGCAGGAGACTGTGGCAGGCCCCATCACTTTCCTCCTAGGGCACAGCCAAGATATCTGCATCTaGGATCCTGGGCATAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSLQETVAGPITFLLGHSQDICI*DPGHSQ Trigger: CTGACTATGCCCAGGATCCAAGATGCAGATATCTTG...GCTGTGCCCTAGGAGGAAAGTGATGGGGCCTGCCACAGTCTCCTGCAGGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR GCA 72 bp | GGCTGGCTGGCTGGCTGGCTGGCAGGAAGGCAGTCATaGAGAAAGATGAATCAGCTGGTAGTCTTTACGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GWLAGWLAGRQS*RKMNQLVVFTW Trigger: CCACGTAAAGACTACCAGCTGATTCATCTTTCTGCATGACTGCCTTCCTGCCAGCCAGCCAGCCAGCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCCCAGAACCCACACAGGGATGCTCAGACCTGCTGTAACCCCAGCTCAAGATATCAACACTCTCTCTaGGGCTCCAAAGCACCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GSQNPHRDAQTCCNPSSRYQHSL*GSKAPH Trigger: GTGGGGTGCTTTGGAGCCCAAGAGAGAGTGTTGATA...TCTTGAGCTGGGGTTACAGCAGGTCTGAGCATCCCTGTGTGGGTTCTGGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR TCA 72 bp | GCTGATAAGAGCTGTGTCCCTTGCCCCTCCTGCTGGTaGCTAAGTGTTCAGACATGTGAGCCTGCAGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ADKSCVPCPSCW*LSVQTCEPAGD Trigger: GTCTCCTGCAGGCTCACATGTCTGAACACTTAGTCACCAGCAGGAGGGGCAAGGGACACAGCTCTTATCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR GCA 72 bp | ATGTGGGTAGGAACATGCACGCTGAAGGACTTTGTGTaGTTCCCAGTGTCGCACTGGAGACTGCTTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: MWVGTCTLKDFV*FPVSHWRLLLS Trigger: GCTCAGAAGCAGTCTCCAGTGCGACACTGGGAAGCACACAAAGTCCTTCAGCGTGCATGTTCCTACCCACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR GCA 72 bp | AGGGGAGCTGTGCTTATGCTGATGTGGGTAGGAACATaGACGCTGAAGGACTTTGTGTGCTTCCCAGTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: RGAVLMLMWVGT*TLKDFVCFPVS Trigger: CGACACTGGGAAGCACACAAAGTCCTTCAGCGTGCATGTTCCTACCCACATCAGCATAAGCACAGCTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR GCA 72 bp | CCTTCCTTCTGCCTCTCAGGACTCCCGTCCACCAGCTaGTCAGCCGTTTGCTTGTATATCCTTATCTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: PSFCLSGLPSTS*SAVCLYILICI Trigger: GATGCAGATAAGGATATACAAGCAAACGGCTGAGCAGCTGGTGGACGGGAGTCCTGAGAGGCAGAAGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR CCA 72 bp | TTCCTCCTAGGGCACAGCTGCTTTCCAAGGTGCTGCTaGACCAGGACCTCAAGATATCTGCATCTTGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: FLLGHSCFPRCC*TRTSRYLHLGS Trigger: GGATCCAAGATGCAGATATCTTGAGGTCCTGGTCCAGCAGCACCTTGGAAAGCAGCTGTGCCCTAGGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR TCA 72 bp | ACCAGAGGCAGGAAGATGGGAAATCTGAGGTTGGCCTaGGCTACAAACTGGGCTCAAGGCCTCGATGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TRGRKMGNLRLA*ATNWAQGLDAF Trigger: AAAAGCATCGAGGCCTTGAGCCCAGTTTGTAGCTCAGGCCAACCTCAGATTTCCCATCTTCCTGCCTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR TCA 72 bp | AGATGGTTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCGGACCTTTGGAAGAGCAGTCGGGTACTC | + |
|
Preference number: 3 (lower is better) Translates to: RWFVSHHVVAGI*TPDLWKSSRVL Trigger: GAGTACCCGACTGCTCTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAAACCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR GCA 72 bp | ACTTTCCTCCTAGGGCACAGCTGCTTTCCAAGGTGCTaGTGGACCAGGACCTCAAGATATCTGCATCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TFLLGHSCFPRC*WTRTSRYLHLG Trigger: TCCAAGATGCAGATATCTTGAGGTCCTGGTCCAGCAGCACCTTGGAAAGCAGCTGTGCCCTAGGAGGAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR TCA 72 bp | TCTTGGATCCTGGGCATAGTCAGCTTTCAGGCAAACTaGCTCCCAACTCCAGCATGCTGCACAATGCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SWILGIVSFQAN*LPTPACCTMQV Trigger: TACCTGCATTGTGCAGCATGCTGGAGTTGGGAGTCAGTTTGCCTGAAAGCTGACTATGCCCAGGATCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR GCA 72 bp | AGCTGGAGAGATGGCTCAGCAATTAAGAGCACTTGCTaGTCTTCCAGAGGACCTGAGTTTGGTTCCCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SWRDGSAIKSTC*SSRGPEFGSQN Trigger: GTTCTGGGAACCAAACTCAGGTCCTCTGGAAGAGCAGCAAGTGCTCTTAATTGCTGAGCCATCTCTCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR GCA 72 bp | ATCACTTTCCTCCTAGGGCACAGCTGCTTTCCAAGGTaGTGCTGGACCAGGACCTCAAGATATCTGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: ITFLLGHSCFPR*CWTRTSRYLHL Trigger: AAGATGCAGATATCTTGAGGTCCTGGTCCAGCAGCACCTTGGAAAGCAGCTGTGCCCTAGGAGGAAAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR CCA 72 bp | GACAACCGAGGATCCAGTTCCCAGGGTCCAGACGGCTaGCTCAACCAAAGCGAATCTCTTCAAGAAACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: DNRGSSSQGPDG*LNQSESLQETF Trigger: AAAAGTTTCTTGAAGAGATTCGCTTTGGTTGAGCCAGCCGTCTGGACCCTGGGAACTGGATCCTCGGTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR CCA 72 bp | GAGGCCAGGACTCTAAGCCTACAGGCTGTTCCACCTTaGATGTCTCTCCACAACAGTTTTGAAGCAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: EARTLSLQAVPP*MSLHNSFEAEV Trigger: CACTTCTGCTTCAAAACTGTTGTGGAGAGACATCCAAGGTGGAACAGCCTGTAGGCTTAGAGTCCTGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR CCA 72 bp | TCAACGGGCTGGAGGGGAGGGAAGAGAGTCATGAGCTaGAGACTACCTGAGCTATATAAGACCCTGTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: STGWRGGKRVMS*RLPELYKTLSL Trigger: TAAAGACAGGGTCTTATATAGCTCAGGTAGTCTCCAGCTCATGACTCTCTTCCCTCCCCTCCAGCCCGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCTACATAATGAGTTCCAGGAAAGCCCAAGTTCAAGGCCAGTCTGAACTACACATCTGGCTAGCCTaGAAGACACAAGAGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLYIMSSRKAQVQGQSELHIWLA*KTQELG Trigger: CCCCAGCTCTTGTGTCTTCAAGGCTAGCCAGATGTG...TAGTTCAGACTGGCCTTGAACTTGGGCTTTCCTGGAACTCATTATGTAGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR TCA 72 bp | GGACCTTTGGAAGAGCAGTCGGGTACTCTTACCCACTaGGCCATCTCACCAGCCCTCATTACTACTATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GPLEEQSGTLTH*AISPALITTIL Trigger: AAGAATAGTAGTAATGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGTACCCGACTGCTCTTCCAAAGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR GCA 72 bp | CTCTCAGGACTCCCGTCCACCAGCTGCTCAGCCGTTTaGTTGTATATCCTTATCTGCATCAGTCTTGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LSGLPSTSCSAV*LYILICISLVL Trigger: TAGAACAAGACTGATGCAGATAAGGATATACAAGCAAACGGCTGAGCAGCTGGTGGACGGGAGTCCTGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGATGGGAAATCTGAGGTTGGCCTGAGCTACAAACTGGGCTCAAGGCCTCGATTGAAGCAGAAGTGCTaGAAAAGTCTGTCTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: EDGKSEVGLSYKLGSRPRLKQKC*KSLSPS Trigger: AGATGGAGACAGACTTTTCAAGCACTTCTGCTTCAA...TCGAGGCCTTGAGCCCAGTTTGTAGCTCAGGCCAACCTCAGATTTCCCATCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCTACATAATGAGTTCCAGGAAAGCCCAAGTTCAAGGCCAGTCTGAACTAAGTCCTCATCCTCTCTaGTCCCTCGATGTCCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLYIMSSRKAQVQGQSELSPHPL*SLDVHL Trigger: GAGATGGACATCGAGGGACAAGAGAGGATGAGGACT...TAGTTCAGACTGGCCTTGAACTTGGGCTTTCCTGGAACTCATTATGTAGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR GCA 72 bp | ATCTTGTTACAGATGGTTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCCGGACCTTTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ILLQMVCEPPCG*WDLNSGPLEEQ Trigger: CTGCTCTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAAACCATCTGTAACAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR CCA 72 bp | TCATGCAGAAAGATGAATCAGCTGGTAGTCTTTACGTaGGATTGTAGGGCACCATCCTCCCAGCACAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SCRKMNQLVVFT*DCRAPSSQHNR Trigger: TCTGTTGTGCTGGGAGGATGGTGCCCTACAATCCCACGTAAAGACTACCAGCTGATTCATCTTTCTGCATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR TCA 72 bp | AAGTGTTATCATTCGAAGAACCAGGAAATGACAACATaGGCTTTCCACGAGCTTCAGCAAGAGAAAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: KCYHSKNQEMTT*AFHELQQEKGT Trigger: TGTGCCTTTCTCTTGCTGAAGCTCGTGGAAAGCTCATGTTGTCATTTCCTGGTTCTTCGAATGATAACACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR TCA 72 bp | TCTCCATCTTGGATTTTTAAGTTCAACAGAGAATTGTaGGAATTCCCACCATTCTCAACAGCTGGCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SPSWIFKFNREL*EFPPFSTAGLS Trigger: GCTGAGGCCAGCTGTTGAGAATGGTGGGAATTCTCACAATTCTCTGTTGAACTTAAAAATCCAAGATGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGGAGACTACCTGAGCTATATAAGACCCTGTCTTTAAGACAAACAGATAGTCTCTCCACAACAGTTTaGAAGCAGAAGTGCTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SWRLPELYKTLSLRQTDSLSTTV*KQKCLK Trigger: TTTCAAGCACTTCTGCTTCAAAACTGTTGTGGAGAG...ACTATCTGTTTGTCTTAAAGACAGGGTCTTATATAGCTCAGGTAGTCTCCAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR GCA 72 bp | TGTTTGCTTAACACATACACAGCCTCAGCTTCAGTGTaGTTATGGAAACACTTTCTGTTCATTCTTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: CLLNTYTASASV*LWKHFLFILSK Trigger: TTTGGAAAGAATGAACAGAAAGTGTTTCCATAAGCACACTGAAGCTGAGGCTGTGTATGTGTTAAGCAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR CCA 72 bp | TGCCATTCTGTCCTCACATCTGTAATTTTAATCCATTaGCAACAAACTGAAATTCAGAGGTATGGTCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CHSVLTSVILIH*QQTEIQRYGQG Trigger: TCCTTGACCATACCTCTGAATTTCAGTTTGTTGCCAATGGATTAAAATTACAGATGTGAGGACAGAATGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR TCA 72 bp | CCTCACATCTGTAATTTTAATCCATTGGCAACAAACTaGAATTCAGAGGTATGGTCAAGGAGAAAGTGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PHICNFNPLATN*NSEVWSRRKCY Trigger: ATAACACTTTCTCCTTGACCATACCTCTGAATTTCAGTTTGTTGCCAATGGATTAAAATTACAGATGTGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| CDS-3UTR GCA 90 bp | AGGCGTCCATGTAAGCAGGCTGGAGGAGCAGGCCTGCAATCCCAGTTAACCAGAGGGCCACCCTCTGCGTaGCGCCGCAGCTGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRPCKQAGGAGLQSQLTRGPPSA*RRSCPA Trigger: GGCAGGACAGCTGCGGCGGCACGCAGAGGGTGGCCC...TCTGGTTAACTGGGATTGCAGGCCTGCTCCTCCAGCCTGCTTACATGGACGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| CDS-3UTR GCA 90 bp | GGTAGGAACATGCACGCTGAAGGACTTTGTGTGCTTCCCAGTGTCGCACTGGAGGGGCCACCCTCTGCGTaGCGCCGCAGCTGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRNMHAEGLCVLPSVALEGPPSA*RRSCPA Trigger: GGCAGGACAGCTGCGGCGGCACGCAGAGGGTGGCCC...CTCCAGTGCGACACTGGGAAGCACACAAAGTCCTTCAGCGTGCATGTTCCTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCGAGTGCTACTCTGGCGTGTGTGAGACCCTGGGGACCCCGTGGTCCAACCGTCATCTTCACGGCCTaGAGGCAGGGCTCAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: WSSATLACVRPWGPRGPTVIFTA*RQGSGL Trigger: CAGTCCTGAGCCCTGCCTGCAGGCCGTGAAGATGAC...GGTTGGACCACGGGGTCCCCAGGGTCTCACACACGCCAGAGTAGCACTCGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| CDS-3UTR TCA 90 bp | GTGAGCCTGCAGGAGACTGTGGCAGGCCCCATCACTTTCCTCCTAGGGCACAGCGTCCAGCATGTTGTGTaGTGCAGGCAGGAGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLQETVAGPITFLLGHSVQHVV*CRQEGS Trigger: AGAACCCTCCTGCCTGCATCACACAACATGCTGGAC...GCTGTGCCCTAGGAGGAAAGTGATGGGGCCTGCCACAGTCTCCTGCAGGCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTAGTGCACACCCGTAATCTCAACGGGCTGGAGGGGAGGGAAGAGAGTCATCCGCCGCAGCTGTCCTaGCAGTACCTTGAGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TVVHTRNLNGLEGREESHPPQLS*QYLEWR Trigger: CCGCCACTCAAGGTACTGGCAGGACAGCTGCGGCGG...ATGACTCTCTTCCCTCCCCTCCAGCCCGTTGAGATTACGGGTGTGCACTACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGAAGATGGGAAATCTGAGGTTGGCCTGAGCTACAAACTGGGCTCAAGGGGCAGGGCTCAGGACTaGAGGCCTGAACCACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQEDGKSEVGLSYKLGSRGRAQD*RPEPPP Trigger: TGGGGGTGGTTCAGGCCTGCAGTCCTGAGCCCTGCC...CCTTGAGCCCAGTTTGTAGCTCAGGCCAACCTCAGATTTCCCATCTTCCTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGTCAAGCCCAGGACTGTTATTCCTTCCTTCTGCCTCTCAGGACTCCCGCAAATTCTGAAATCCTaGGAGGAGGCAGGGCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWVKPRTVIPSFCLSGLPQILKS*EEAGPA Trigger: GGCCGGCCCTGCCTCCTCCCAGGATTTCAGAATTTG...CGGGAGTCCTGAGAGGCAGAAGGAAGGAATAACAGTCCTGGGCTTGACCCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGACCAGGACCTCAAGATATCTGCATCTTGGATCCTGGGCATAGTCAGCTTCCGCCGCAGCTGTCCTaGCAGTACCTTGAGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGPGPQDICILDPGHSQLPPQLS*QYLEWR Trigger: CCGCCACTCAAGGTACTGGCAGGACAGCTGCGGCGG...AAGCTGACTATGCCCAGGATCCAAGATGCAGATATCTTGAGGTCCTGGTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGAAGATGGGAAATCTGAGGTTGGCCTGAGCTACAAACTGGGCTCAAGGCATCACATACTTTCCTaGGAGGAGGCAGGGCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQEDGKSEVGLSYKLGSRHHILS*EEAGPA Trigger: GGCCGGCCCTGCCTCCTCCCAGGAAAGTATGTGATG...CCTTGAGCCCAGTTTGTAGCTCAGGCCAACCTCAGATTTCCCATCTTCCTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
||
| 3UTR CAA 72 bp | GAGGCAGGTCTAGATCACCTGAGTCCTCATCCTCTCTaGTCCCTCGATGTCCATCTCCTGCCAGGTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: EAGLDHLSPHPL*SLDVHLLPGDS Trigger: GGAGTCACCTGGCAGGAGATGGACATCGAGGGACAAGAGAGGATGAGGACTCAGGTGATCTAGACCTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| CDS-3UTR TCA 90 bp | CATCACTTTCCTCCTAGGGCACAGCTGCTTTCCAAGGTGCTGCTGGACCAGGACGTTTCTTTCAAATTCTaGAATCCTGGGAGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HHFPPRAQLLSKVLLDQDVSFKF*NPGRRQ Trigger: CTGCCTCCTCCCAGGATTTCAGAATTTGAAAGAAAC...GTCCTGGTCCAGCAGCACCTTGGAAAGCAGCTGTGCCCTAGGAGGAAAGTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| CDS-3UTR GCA 90 bp | AGAGTCCTACAGCAAGACTGTAACATAAGATGGCCTGCTGGGTCTTTGCCATCCCCTCCAGTTCCCACATaGTTTCGTGGACAGGATTGT | + |
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Preference number: 4 (lower is better) Translates to: RVLQQDCNIRWPAGSLPSPPVPT*FRGQDC Trigger: ACAATCCTGTCCACGAAAGCATGTGGGAACTGGAGG...GGATGGCAAAGACCCAGCAGGCCATCTTATGTTACAGTCTTGCTGTAGGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| 3UTR CAA 72 bp | ATTTTAGGCTGGAAATGTGGCTCAGTAATACAGTGTTaGCTTAGCTTGCAGGAAGCCCTGGGTTCCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: ILGWKCGSVIQC*LSLQEALGSIP Trigger: GGGGATGGAACCCAGGGCTTCCTGCAAGCTAAGCAAACACTGTATTACTGAGCCACATTTCCAGCCTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| CDS TCA 90 bp | CCGGGCCACCCTCTGCGTGCCGCCGCAGCTGTCCTGCCAGTACCTTaGGTGGCGGCAAGCGCGGCAGCCGCACGGCCCCGGGGCCACCGG | + |
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Preference number: 5 (lower is better) Translates to: PGHPLRAAAAVLPVP*VAASAAAARPRGHR Trigger: CCGGTGGCCCCGGGGCCGTGCGGCTGCCGCGCTTGCCGCCACTCAAGGTACTGGCAGGACAGCTGCGGCGGCACGCAGAGGGTGGCCCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037913.9 ENSMUST00000181721.2 |
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| CDS GCA 90 bp | CCGCCACGCGCCCGGGCCACCCTCTGCGTGCCGCCGCAGCTGTCCTaGCAGTACCTTGAGTGGCGGCAAGCGCGGCAGCCGCACGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: PPRARATLCVPPQLS*QYLEWRQARQPHGP Trigger: GGGGCCGTGCGGCTGCCGCGCTTGCCGCCACTCAAGGTACTGGCAGGACAGCTGCGGCGGCACGCAGAGGGTGGCCCGGGCGCGTGGCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037913.9 ENSMUST00000181721.2 |
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| CDS CCA 90 bp | GCCACCCTCTGCGTGCCGCCGCAGCTGTCCTGCCAGTACCTTGAGTaGCGGCAAGCGCGGCAGCCGCACGGCCCCGGGGCCACCGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: ATLCVPPQLSCQYLE*RQARQPHGPGATGG Trigger: TCCTCCGGTGGCCCCGGGGCCGTGCGGCTGCCGCGCTTGCCGCCACTCAAGGTACTGGCAGGACAGCTGCGGCGGCACGCAGAGGGTGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037913.9 ENSMUST00000181721.2 |
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| CDS CCA 90 bp | AGGCCGCGCACAGAGAAGGCTCCGCTCGAGTCGCGCAGCCGGGCCTaGCCGCCTTCCGCCGCCAGCACGGTACCCTGCATCCACACGGCC | + |
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Preference number: 5 (lower is better) Translates to: RPRTEKAPLESRSRA*PPSAASTVPCIHTA Trigger: GGCCGTGTGGATGCAGGGTACCGTGCTGGCGGCGGAAGGCGGCCAGGCCCGGCTGCGCGACTCGAGCGGAGCCTTCTCTGTGCGCGGCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037913.9 ENSMUST00000181721.2 |
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| CDS CCA 90 bp | CATCACCATCACATACTTTCCTGGGAGGAGGCAGGGCCGGCCGCGTaGTACGCGCTCCAGGCCGCGCACAGAGAAGGCTCCGCTCGAGTC | + |
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Preference number: 5 (lower is better) Translates to: HHHHILSWEEAGPAA*YALQAAHREGSARV Trigger: GACTCGAGCGGAGCCTTCTCTGTGCGCGGCCTGGAGCGCGTACCACGCGGCCGGCCCTGCCTCCTCCCAGGAAAGTATGTGATGGTGATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| CDS CCA 90 bp | TTCTTTCAAATTCTGAAATCCTGGGAGGAGGCAGGGCCGGCCGCGTaGTACGCGCTCCAGGCCGCGCACAGAGAAGGCTCCGCTCGAGTC | + |
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Preference number: 5 (lower is better) Translates to: FFQILKSWEEAGPAA*YALQAAHREGSARV Trigger: GACTCGAGCGGAGCCTTCTCTGTGCGCGGCCTGGAGCGCGTACCACGCGGCCGGCCCTGCCTCCTCCCAGGATTTCAGAATTTGAAAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCTGTGCTTATGCTGATGTGGGTAGGAACATGCACGCTGAAGGACTTTGTGTCAAGTCCAGCATGTaGTGTGATGCAGGCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: GSCAYADVGRNMHAEGLCVKSSM*CDAGRR Trigger: CCTCCTGCCTGCATCACACAACATGCTGGACTTGAC...ACAAAGTCCTTCAGCGTGCATGTTCCTACCCACATCAGCATAAGCACAGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| CDS CCA 90 bp | ATATTCCTGTGTAAATCTTCCACCTCCAGTTCCCACATGCTTTCGTaGACAGGATTGTCAGAAAGATCCGTCATCTTCACGGCCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: IFLCKSSTSSSHMLS*TGLSERSVIFTACR Trigger: CCTGCAGGCCGTGAAGATGACGGATCTTTCTGACAATCCTGTCCACGAAAGCATGTGGGAACTGGAGGTGGAAGATTTACACAGGAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| CDS CAA 90 bp | CCCGGGCCACCCTCTGCGTGCCGCCGCAGCTGTCCTGCCAGTACCTaGAGTGGCGGCAAGCGCGGCAGCCGCACGGCCCCGGGGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: PGPPSACRRSCPAST*SGGKRGSRTAPGPP Trigger: CGGTGGCCCCGGGGCCGTGCGGCTGCCGCGCTTGCCGCCACTCAAGGTACTGGCAGGACAGCTGCGGCGGCACGCAGAGGGTGGCCCGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037913.9 ENSMUST00000181721.2 |
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| CDS GCA 72 bp | CGCCCGCGACAGCCGCCACGCGCCCGGGCCACCCTCTaGGTGCCGCCGCAGCTGTCCTGCCAGTACCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: RPRQPPRARATL*VPPQLSCQYLE Trigger: CTCAAGGTACTGGCAGGACAGCTGCGGCGGCACGCAGAGGGTGGCCCGGGCGCGTGGCGGCTGTCGCGGGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037913.9 ENSMUST00000181721.2 |
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| CDS GCA 72 bp | CGGGCCTGGCCGCCTTCCGCCGCCAGCACGGTACCCTaGATCCACACGGCCACCAGCTCCAGCGGAGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: RAWPPSAASTVP*IHTATSSSGAR Trigger: CCGCGCTCCGCTGGAGCTGGTGGCCGTGTGGATGCAGGGTACCGTGCTGGCGGCGGAAGGCGGCCAGGCCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037913.9 ENSMUST00000181721.2 |
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| CDS CCA 72 bp | TGCGTGCCGCCGCAGCTGTCCTGCCAGTACCTTGAGTaGCGGCAAGCGCGGCAGCCGCACGGCCCCGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: CVPPQLSCQYLE*RQARQPHGPGA Trigger: GGCCCCGGGGCCGTGCGGCTGCCGCGCTTGCCGCCACTCAAGGTACTGGCAGGACAGCTGCGGCGGCACGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037913.9 ENSMUST00000181721.2 |
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| CDS TCA 72 bp | CCTCTGCGTGCCGCCGCAGCTGTCCTGCCAGTACCTTaGGTGGCGGCAAGCGCGGCAGCCGCACGGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: PLRAAAAVLPVP*VAASAAAARPR Trigger: CCGGGGCCGTGCGGCTGCCGCGCTTGCCGCCACTCAAGGTACTGGCAGGACAGCTGCGGCGGCACGCAGAGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037913.9 ENSMUST00000181721.2 |
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| CDS GCA 72 bp | GCCCGGGCCACCCTCTGCGTGCCGCCGCAGCTGTCCTaGCAGTACCTTGAGTGGCGGCAAGCGCGGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: ARATLCVPPQLS*QYLEWRQARQP Trigger: CGGCTGCCGCGCTTGCCGCCACTCAAGGTACTGGCAGGACAGCTGCGGCGGCACGCAGAGGGTGGCCCGGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037913.9 ENSMUST00000181721.2 |
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| CDS GCA 72 bp | CGCGACAGCCGCCACGCGCCCGGGCCACCCTCTGCGTaGCGCCGCAGCTGTCCTGCCAGTACCTTGAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RDSRHAPGPPSA*RRSCPASTLSG Trigger: GCCACTCAAGGTACTGGCAGGACAGCTGCGGCGGCACGCAGAGGGTGGCCCGGGCGCGTGGCGGCTGTCGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037913.9 ENSMUST00000181721.2 |
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| CDS CAA 72 bp | CCCTCTGCGTGCCGCCGCAGCTGTCCTGCCAGTACCTaGAGTGGCGGCAAGCGCGGCAGCCGCACGGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: PSACRRSCPAST*SGGKRGSRTAP Trigger: CGGGGCCGTGCGGCTGCCGCGCTTGCCGCCACTCAAGGTACTGGCAGGACAGCTGCGGCGGCACGCAGAGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037913.9 ENSMUST00000181721.2 |
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| CDS CAA 90 bp | TGTAAATCTTCCACCTCCAGTTCCCACATGCTTTCGTGGACAGGATaGTCAGAAAGATCCGTCATCTTCACGGCCTGCAGGCAGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: CKSSTSSSHMLSWTG*SERSVIFTACRQGS Trigger: TGAGCCCTGCCTGCAGGCCGTGAAGATGACGGATCTTTCTGACAATCCTGTCCACGAAAGCATGTGGGAACTGGAGGTGGAAGATTTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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| CDS CCA 72 bp | TGTGTGATGCAGGCAGGAGGGTTCTTTTCAGCTGAGTaGTTTCTTTCAAATTCTGAAATCCTGGGAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: CVMQAGGFFSAE*FLSNSEILGGG Trigger: GCCTCCTCCCAGGATTTCAGAATTTGAAAGAAACCACTCAGCTGAAAAGAACCCTCCTGCCTGCATCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181721.2 |
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| CDS CCA 72 bp | TGTAAATCTTCCACCTCCAGTTCCCACATGCTTTCGTaGACAGGATTGTCAGAAAGATCCGTCATCTTCACG | + |
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Preference number: 6 (lower is better) Translates to: CKSSTSSSHMLS*TGLSERSVIFT Trigger: CGTGAAGATGACGGATCTTTCTGACAATCCTGTCCACGAAAGCATGTGGGAACTGGAGGTGGAAGATTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037913.9 |
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