Pregenerated sensors for RMDN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036368Ensembl transcript IDs: ENSMUST00000040368.3, ENSMUST00000086570.3, ENSMUST00000223924.2, ENSMUST00000224014.2, ENSMUST00000224097.2, ENSMUST00000224618.2, ENSMUST00000225357.2, ENSMUST00000226004.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGGATTAGAACTCCCTTGGTCCAGCATTGTACACGAAGTCTCCTaGAAAGTCAGACTCTGTGTCCTTCATCTTTACGTGGAAGGGGTC | + |
|
Preference number: 1 (lower is better) Translates to: SGLELPWSSIVHEVS*KVRLCVLHLYVEGV Trigger: GACCCCTTCCACGTAAAGATGAAGGACACAGAGTCTGACTTTTCAGGAGACTTCGTGTACAATGCTGGACCAAGGGAGTTCTAATCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224097.2 |
||
| 3UTR TCA 90 bp | TGTTTATTTCTCTCATGTGTTATGAGAAATTGTAACATACAGTCTTaGTTTGTATCTTCGGGAGAGACTCCAAGTTCTGGATTAGAACTC | + |
|
Preference number: 1 (lower is better) Translates to: CLFLSCVMRNCNIQS*FVSSGETPSSGLEL Trigger: GAGTTCTAATCCAGAACTTGGAGTCTCTCCCGAAGATACAAATCAAGACTGTATGTTACAATTTCTCATAACACATGAGAGAAATAAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224097.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAACTCCCTTGGTCCAGCATTGTACACGAAGTCTCCTGAAAAGTCAGACTCTGCAAGGTCAGGTATCTTaGATGGTGAGTGAAGCAACC | + |
|
Preference number: 2 (lower is better) Translates to: RTPLVQHCTRSLLKSQTLQGQVS*MVSEAT Trigger: GGTTGCTTCACTCACCATTCAAGATACCTGACCTTG...CAGAGTCTGACTTTTCAGGAGACTTCGTGTACAATGCTGGACCAAGGGAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224097.2 |
||
| 3UTR CAA 90 bp | ATTTGTATCTTCGGGAGAGACTCCAAGTTCTGGATTAGAACTCCCTaGGTCCAGCATTGTACACGAAGTCTCCTGAAAAGTCAGACTCTG | + |
|
Preference number: 2 (lower is better) Translates to: ICIFGRDSKFWIRTP*VQHCTRSLLKSQTL Trigger: CAGAGTCTGACTTTTCAGGAGACTTCGTGTACAATGCTGGACCAAGGGAGTTCTAATCCAGAACTTGGAGTCTCTCCCGAAGATACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224097.2 |
||
| 3UTR TCA 72 bp | GAACTCCCTTGGTCCAGCATTGTACACGAAGTCTCCTaGAAAGTCAGACTCTGTGTCCTTCATCTTTACGTG | + |
|
Preference number: 3 (lower is better) Translates to: ELPWSSIVHEVS*KVRLCVLHLYV Trigger: CACGTAAAGATGAAGGACACAGAGTCTGACTTTTCAGGAGACTTCGTGTACAATGCTGGACCAAGGGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224097.2 |
||
| 3UTR GCA 72 bp | ACCCTTCCAAGTTTGACAGTGGAACAGTATTTTTATTaGAGCTCTATTTGCATGCCTGATCGCTTGCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TLPSLTVEQYFY*SSICMPDRLLC Trigger: GCACAGCAAGCGATCAGGCATGCAAATAGAGCTGCAATAAAAATACTGTTCCACTGTCAAACTTGGAAGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225357.2 |
||
| 3UTR-3UTR CAA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGAAGACGGTATTGGGTTaGCTGAAGAATAAGGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: NIRVSTASKEHDLSHSAVKTVLG*LKNKVF Trigger: AAAGACCTTATTCTTCAGCAAACCCAATACCGTCTT...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| 3UTR TCA 72 bp | CTCTCATGTGTTATGAGAAATTGTAACATACAGTCTTaGTTTGTATCTTCGGGAGAGACTCCAAGTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSCVMRNCNIQS*FVSSGETPSSG Trigger: TCCAGAACTTGGAGTCTCTCCCGAAGATACAAATCAAGACTGTATGTTACAATTTCTCATAACACATGAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224097.2 |
||
| CDS-3UTR TCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGAGAAGGCCAGCAAGCTaGTCCCAGCAGTCCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVRRPAS*SQQSPP Trigger: TGGCGGGGACTGCTGGGATCAGCTTGCTGGCCTTCT...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGCAGCAGTCCCCGCCATaGTGCCAAGGATTAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVQQSPP*CQGLAL Trigger: AAGAGCTAATCCTTGGCATCATGGCGGGGACTGCTG...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGTGGTCGTCCTTGGCTTaGGGACCTTGTGGTACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVWSSLA*GPCGTR Trigger: TCTGGTACCACAAGGTCCTCAAGCCAAGGACGACCA...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGGGCTTGAGGACCTTGTaGTACCAGAAGGCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVGLRTL*YQKASK Trigger: CTTGCTGGCCTTCTGGTACCACAAGGTCCTCAAGCC...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGGCTCCTTGCGCACTGTaGCTTTCCTCTGGCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVAPCAL*LSSGRV Trigger: AACTCTGCCAGAGGAAAGCCACAGTGCGCAAGGAGC...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| 3UTR CAA 72 bp | TTCGGGAGAGACTCCAAGTTCTGGATTAGAACTCCCTaGGTCCAGCATTGTACACGAAGTCTCCTGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FGRDSKFWIRTP*VQHCTRSLLKS Trigger: ACTTTTCAGGAGACTTCGTGTACAATGCTGGACCAAGGGAGTTCTAATCCAGAACTTGGAGTCTCTCCCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224097.2 |
||
| CDS-3UTR TCA 90 bp | AACCCTTCCAAGTTTGACAGTGGAACAGTATTTTTATTGCAGCTCTATTTGCATCAGCAGTCCCCGCCATaGTGCCAAGGATTAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NPSKFDSGTVFLLQLYLHQQSPP*CQGLAL Trigger: AAGAGCTAATCCTTGGCATCATGGCGGGGACTGCTG...ATGCAAATAGAGCTGCAATAAAAATACTGTTCCACTGTCAAACTTGGAAGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225357.2 |
||
| CDS-3UTR GCA 90 bp | AACCCTTCCAAGTTTGACAGTGGAACAGTATTTTTATTGCAGCTCTATTTGCATACCACCGATGCTCCTTaGGCACTGTGGCTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NPSKFDSGTVFLLQLYLHTTDAP*ALWLSS Trigger: AGAGGAAAGCCACAGTGCGCAAGGAGCATCGGTGGT...ATGCAAATAGAGCTGCAATAAAAATACTGTTCCACTGTCAAACTTGGAAGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225357.2 |
||
| CDS-3UTR GCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGTGTCCGCAAATGGTCTaGCTTCTGAAGGAGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVCPQMV*LLKEDI Trigger: GATGTCCTCCTTCAGAAGGCAGACCATTTGCGGACA...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | AACCCTTCCAAGTTTGACAGTGGAACAGTATTTTTATTGCAGCTCTATTTGCATGGCTTGAGGACCTTGTaGTACCAGAAGGCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NPSKFDSGTVFLLQLYLHGLRTL*YQKASK Trigger: CTTGCTGGCCTTCTGGTACCACAAGGTCCTCAAGCC...ATGCAAATAGAGCTGCAATAAAAATACTGTTCCACTGTCAAACTTGGAAGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGACTGCATACCACAGATaGCAGTGTCCATTCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVTAYHR*QCPFMG Trigger: GCCCATGAATGGACACTGCCATCTGTGGTATGCAGT...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTTGGTCGTCCTTGGCTTaGGGACCTTGTGGTACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTWSSLA*GPCGTR Trigger: TCTGGTACCACAAGGTCCTCAAGCCAAGGACGACCA...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGCTCTGTGCTGAGGACTaGTCTTATGAACTGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVLCAED*SYELSP Trigger: AGGTGACAGTTCATAAGATCAGTCCTCAGCACAGAG...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | AGAACTCCCTTGGTCCAGCATTGTACACGAAGTCTCCTGAAAAGTCAGACTCTGTCCTCTTCAAAGAACTaGTCATTTTCTTCACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTPLVQHCTRSLLKSQTLSSSKN*SFSSPL Trigger: AAGAGGTGAAGAAAATGATCAGTTCTTTGAAGAGGA...CAGAGTCTGACTTTTCAGGAGACTTCGTGTACAATGCTGGACCAAGGGAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224097.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTACCACCGATGCTCCTTaGGCACTGTGGCTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTTTDAP*ALWLSS Trigger: AGAGGAAAGCCACAGTGCGCAAGGAGCATCGGTGGT...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTGCTCCTTGCGCACTGTaGCTTTCCTCTGGCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTAPCAL*LSSGRV Trigger: AACTCTGCCAGAGGAAAGCCACAGTGCGCAAGGAGC...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGAAATGGTCTGCCTTCTaGAGGAGGACATCCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVKWSAF*RRTSNF Trigger: AAAGTTGGATGTCCTCCTTCAGAAGGCAGACCATTT...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGAATCCAGCTGAGTCTTaGGACTGTATAACAGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVNPAES*DCITVP Trigger: AGGTACTGTTATACAGTCTCAAGACTCAGCTGGATT...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTCCTTGTCCTCTTTGGTaGCAACAGGCAGTAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTPCPLW*QQAVAM Trigger: CATTGCTACTGCCTGTTGTCACCAAAGAGGACAAGG...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTTGTCCGCAAATGGTCTaGCTTCTGAAGGAGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTCPQMV*LLKEDI Trigger: GATGTCCTCCTTCAGAAGGCAGACCATTTGCGGACA...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTACTGCATACCACAGATaGCAGTGTCCATTCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTTAYHR*QCPFMG Trigger: GCCCATGAATGGACACTGCCATCTGTGGTATGCAGT...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGTCTTCAGGCAAAAGCTaGATGGCTATTTCTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVSSGKS*MAISRC Trigger: GCATCTAGAAATAGCCATCCAGCTTTTGCCTGAAGA...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGTTCTTCACCTCTTTATaGGCATCCTTGTCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVFFTSL*ASLSSL Trigger: CAAAGAGGACAAGGATGCCCATAAAGAGGTGAAGAA...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTCTCTGTGCTGAGGACTaGTCTTATGAACTGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTLCAED*SYELSP Trigger: AGGTGACAGTTCATAAGATCAGTCCTCAGCACAGAG...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGTTTTCTCAATCCAGCTaGGTCTTGAGACTGTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVFSQSS*VLRLYN Trigger: GTTATACAGTCTCAAGACTCAGCTGGATTGAGAAAA...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGCTAAACTTCTCCTTGTaGTCACAGAGTAGCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVLNFSL*SQSSSK Trigger: TTTTGAGCTACTCTGTGACCACAAGGAGAAGTTTAG...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTAAATGGTCTGCCTTCTaGAGGAGGACATCCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTKWSAF*RRTSNF Trigger: AAAGTTGGATGTCCTCCTTCAGAAGGCAGACCATTT...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGACCTCTTCAAAGAACTaGTCATTTTCTTCACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVTSSKN*SFSSPL Trigger: AAGAGGTGAAGAAAATGATCAGTTCTTTGAAGAGGT...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGACATTCCTCCAGCTTTaGAATTGTCTCTTTAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVTFLQL*NCLFKE Trigger: TTCCTTAAAGAGACAATTCCAAAGCTGGAGGAATGT...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | AACCCTTCCAAGTTTGACAGTGGAACAGTATTTTTATTGCAGCTCTATTTGCATTCTTCAGGCAAAAGCTaGATGGCTATTTCTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NPSKFDSGTVFLLQLYLHSSGKS*MAISRC Trigger: GCATCTAGAAATAGCCATCCAGCTTTTGCCTGAAGA...ATGCAAATAGAGCTGCAATAAAAATACTGTTCCACTGTCAAACTTGGAAGGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTAATCCAGCTGAGTCTTaGGACTGTATAACAGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTNPAES*DCITVP Trigger: AGGTACTGTTATACAGTCTCAAGACTCAGCTGGATT...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTATAACCACACAAAACTaGATACCACAGATGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTITTQN*IPQMAV Trigger: CACTGCCATCTGTGGTATGCAGTTTTGTGTGGTTAT...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR GCA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGCAGTTAATTTTGTTTTaGAAGCCCTCAAACTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NIRVSTASKEHDLSHSAVQLILF*KPSNSD Trigger: ATCTGAGTTTGAGGGCTTGCAAAACAAAATTAACTG...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTTCAGTTCTTCCATGTTaGTCAGTAGCTCGTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTSVLPC*SVARLA Trigger: AGCTAAACGAGCTACTGACCAACATGGAAGAACTGA...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTCAGGCAAAAGCTGGATaGCTATTTCTAGATGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTQAKAG*LFLDAS Trigger: AGAAGCATCTAGAAATAGCCATCCAGCTTTTGCCTG...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTTTCTTCACCTCTTTATaGGCATCCTTGTCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTFFTSL*ASLSSL Trigger: CAAAGAGGACAAGGATGCCCATAAAGAGGTGAAGAA...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTTTTTCTCAATCCAGCTaGGTCTTGAGACTGTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTFSQSS*VLRLYN Trigger: GTTATACAGTCTCAAGACTCAGCTGGATTGAGAAAA...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR GCA 90 bp | AACCCTTCCAAGTTTGACAGTGGAACAGTATTTTTATTGCAGCTCTATTTGCATCAGTTAATTTTGTTTTaGAAGCCCTCAAACTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NPSKFDSGTVFLLQLYLHQLILF*KPSNSD Trigger: ATCTGAGTTTGAGGGCTTGCAAAACAAAATTAACTG...ATGCAAATAGAGCTGCAATAAAAATACTGTTCCACTGTCAAACTTGGAAGGGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225357.2 |
||
| CDS-3UTR GCA 90 bp | AACCCTTCCAAGTTTGACAGTGGAACAGTATTTTTATTGCAGCTCTATTTGCATATGGCTATTTCTAGATaGTTCTTGAATAGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPSKFDSGTVFLLQLYLHMAISR*FLNRCP Trigger: TGGACATCTATTCAAGAAGCATCTAGAAATAGCCAT...ATGCAAATAGAGCTGCAATAAAAATACTGTTCCACTGTCAAACTTGGAAGGGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTACATTCCTCCAGCTTTaGAATTGTCTCTTTAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTTFLQL*NCLFKE Trigger: TTCCTTAAAGAGACAATTCCAAAGCTGGAGGAATGT...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTATGGCTATTTCTAGATaGTTCTTGAATAGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTMAISR*FLNRCP Trigger: TGGACATCTATTCAAGAAGCATCTAGAAATAGCCAT...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTGTTCAACATAACACTTaGCTGTATACATATAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTVQHNT*LYTYSW Trigger: CCAACTATATGTATACAGCCAAGTGTTATGTTGAAC...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS CCA 90 bp | AGAAGCTTAGGGAAGTTCATGGTCGTCCTTGGCTTGAGGACCTTGTaGTACCAGAAGGCCAGCAAGCTGATCCCAGCAGTCCCCGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RSLGKFMVVLGLRTL*YQKASKLIPAVPAM Trigger: CATGGCGGGGACTGCTGGGATCAGCTTGCTGGCCTTCTGGTACCACAAGGTCCTCAAGCCAAGGACGACCATGAACTTCCCTAAGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040368.3 ENSMUST00000223924.2 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||
| CDS CCA 90 bp | TTTCTTACCCAGAGAAAGAAGCTTAGGGAAGTTCATGGTCGTCCTTaGCTTGAGGACCTTGTGGTACCAGAAGGCCAGCAAGCTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLTQRKKLREVHGRP*LEDLVVPEGQQADP Trigger: GGGATCAGCTTGCTGGCCTTCTGGTACCACAAGGTCCTCAAGCCAAGGACGACCATGAACTTCCCTAAGCTTCTTTCTCTGGGTAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040368.3 ENSMUST00000223924.2 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||
| CDS CCA 90 bp | ATCTTGGAGGAAGCTGGCAGAAGACGGATGCTGTTCCAAACCAGCTaGAGAGTAATTTCCACTCAGACTCTGAGACCTGTGATGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILEEAGRRRMLFQTS*RVISTQTLRPVMKG Trigger: GCCCTTCATCACAGGTCTCAGAGTCTGAGTGGAAATTACTCTCCAGCTGGTTTGGAACAGCATCCGTCTTCTGCCAGCTTCCTCCAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS-3UTR CAA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGCTGGAGTTGCCTCCTTaGAAAGACCACCGATGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NIRVSTASKEHDLSHSAVLELPP*KDHRCS Trigger: GGAGCATCGGTGGTCTTTCAAAGGAGGCAACTCCAG...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS CCA 90 bp | TCAAAGGAGCCTGAGGTAACTTCAACAGTCAAGCTACCGATAGTTTaGTACAGTGAAGAAAGTTCATCTTGGAGGAAGCTGGCAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SKEPEVTSTVKLPIV*YSEESSSWRKLAED Trigger: GTCTTCTGCCAGCTTCCTCCAAGATGAACTTTCTTCACTGTACCAAACTATCGGTAGCTTGACTGTTGAAGTTACCTCAGGCTCCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS-3UTR CAA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGGCATCCTTGTCCTCTTaGGTGACAACAGGCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: NIRVSTASKEHDLSHSAVASLSS*VTTGSS Trigger: GCTACTGCCTGTTGTCACCAAAGAGGACAAGGATGC...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CAA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGCTGAGCTGTTACTTGTaGCTGAGCGTTGAACGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NIRVSTASKEHDLSHSAVLSCYL*LSVERL Trigger: CAACCGTTCAACGCTCAGCAACAAGTAACAGCTCAG...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS TCA 90 bp | CCAGGTTGCAGTTCTTCAGTCTTAAGGAAGTTGTGCAAAGCTTCATaGACCGTTGAATATGGTATTTCTCCGAACAGAGTAGCAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: PGCSSSVLRKLCKAS*TVEYGISPNRVAAI Trigger: AATGGCTGCTACTCTGTTCGGAGAAATACCATATTCAACGGTTCATGAAGCTTTGCACAACTTCCTTAAGACTGAAGAACTGCAACCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CAA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGTTCAGTTCTTCCATGTaGGTCAGTAGCTCGTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: NIRVSTASKEHDLSHSAVFSSSM*VSSSFS Trigger: GCTAAACGAGCTACTGACCAACATGGAAGAACTGAA...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CAA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGTCACTAAACTTCTCCTaGTGGTCACAGAGTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NIRVSTASKEHDLSHSAVSLNFS*WSQSSS Trigger: TGAGCTACTCTGTGACCACAAGGAGAAGTTTAGTGA...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS CCA 90 bp | TGTCACCTTCCCTCCGAATTCATCTTGTATACATTCCTCCAGCTTTaGAATTGTCTCTTTAAGGAATCTGATTTCCTCCTTCAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CHLPSEFILYTFLQL*NCLFKESDFLLQFF Trigger: GAAGAACTGAAGGAGGAAATCAGATTCCTTAAAGAGACAATTCCAAAGCTGGAGGAATGTATACAAGATGAATTCGGAGGGAAGGTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040368.3 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTCTGAGCTGTTACTTGTaGCTGAGCGTTGAACGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTLSCYL*LSVERL Trigger: CAACCGTTCAACGCTCAGCAACAAGTAACAGCTCAG...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CAA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGTGTCCACAGTTAATTTaGTTTTGCAAGCCCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NIRVSTASKEHDLSHSAVCPQLI*FCKPSN Trigger: GTTTGAGGGCTTGCAAAACAAAATTAACTGTGGACA...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTTTCAGTTCTTCCATGTaGGTCAGTAGCTCGTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTFSSSM*VSSSFS Trigger: GCTAAACGAGCTACTGACCAACATGGAAGAACTGAA...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CAA 90 bp | AACATCAGAGTAAGTACTGCCTCCAAAGAACATGATTTGTCTCATAGTGCAGTGACAGTTAATTTTGTTTaGCAAGCCCTCAAACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NIRVSTASKEHDLSHSAVTVNFV*QALKLR Trigger: TCTGAGTTTGAGGGCTTGCAAAACAAAATTAACTGT...CACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAGTACTTACTCTGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTTGTCCACAGTTAATTTaGTTTTGCAAGCCCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTCPQLI*FCKPSN Trigger: GTTTGAGGGCTTGCAAAACAAAATTAACTGTGGACA...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGAAGTATACATGTCCAGAGATCGTTACATACTAACATCAGAGTAAGTACTACAGTTAATTTTGTTTaGCAAGCCCTCAAACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRSIHVQRSLHTNIRVSTTVNFV*QALKLR Trigger: TCTGAGTTTGAGGGCTTGCAAAACAAAATTAACTGT...AGTACTTACTCTGATGTTAGTATGTAACGATCTCTGGACATGTATACTTCTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS CAA 90 bp | GAAAGAAGCTTAGGGAAGTTCATGGTCGTCCTTGGCTTGAGGACCTaGTGGTACCAGAAGGCCAGCAAGCTGATCCCAGCAGTCCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ERSLGKFMVVLGLRT*WYQKASKLIPAVPA Trigger: GGCGGGGACTGCTGGGATCAGCTTGCTGGCCTTCTGGTACCACAAGGTCCTCAAGCCAAGGACGACCATGAACTTCCCTAAGCTTCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040368.3 ENSMUST00000223924.2 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||
| CDS CCA 72 bp | GGGAAGTTCATGGTCGTCCTTGGCTTGAGGACCTTGTaGTACCAGAAGGCCAGCAAGCTGATCCCAGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GKFMVVLGLRTL*YQKASKLIPAV Trigger: GACTGCTGGGATCAGCTTGCTGGCCTTCTGGTACCACAAGGTCCTCAAGCCAAGGACGACCATGAACTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040368.3 ENSMUST00000223924.2 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||
| CDS CAA 72 bp | TTAGGGAAGTTCATGGTCGTCCTTGGCTTGAGGACCTaGTGGTACCAGAAGGCCAGCAAGCTGATCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGKFMVVLGLRT*WYQKASKLIPA Trigger: TGCTGGGATCAGCTTGCTGGCCTTCTGGTACCACAAGGTCCTCAAGCCAAGGACGACCATGAACTTCCCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040368.3 ENSMUST00000223924.2 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||
| CDS CAA 72 bp | GAAAGAAGCTTAGGGAAGTTCATGGTCGTCCTTGGCTaGAGGACCTTGTGGTACCAGAAGGCCAGCAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ERSLGKFMVVLG*RTLWYQKASKL Trigger: CAGCTTGCTGGCCTTCTGGTACCACAAGGTCCTCAAGCCAAGGACGACCATGAACTTCCCTAAGCTTCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040368.3 ENSMUST00000223924.2 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||
| CDS CAA 90 bp | TTACCCAGAGAAAGAAGCTTAGGGAAGTTCATGGTCGTCCTTGGCTaGAGGACCTTGTGGTACCAGAAGGCCAGCAAGCTGATCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPRERSLGKFMVVLG*RTLWYQKASKLIPA Trigger: TGCTGGGATCAGCTTGCTGGCCTTCTGGTACCACAAGGTCCTCAAGCCAAGGACGACCATGAACTTCCCTAAGCTTCTTTCTCTGGGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040368.3 ENSMUST00000223924.2 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||
| CDS CCA 72 bp | CAGAGAAAGAAGCTTAGGGAAGTTCATGGTCGTCCTTaGCTTGAGGACCTTGTGGTACCAGAAGGCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QRKKLREVHGRP*LEDLVVPEGQQ Trigger: TTGCTGGCCTTCTGGTACCACAAGGTCCTCAAGCCAAGGACGACCATGAACTTCCCTAAGCTTCTTTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040368.3 ENSMUST00000223924.2 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||
| CDS CCA 72 bp | GAAGCTGGCAGAAGACGGATGCTGTTCCAAACCAGCTaGAGAGTAATTTCCACTCAGACTCTGAGACCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: EAGRRRMLFQTS*RVISTQTLRPV Trigger: CACAGGTCTCAGAGTCTGAGTGGAAATTACTCTCCAGCTGGTTTGGAACAGCATCCGTCTTCTGCCAGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS CCA 72 bp | ATGCATGCGTTGTGGAGTAACTGGATCGTCATGATTTaGTTGGAAGCACTGGTCCTTTTTCCAGCAGCCCNN | + |
|
Preference number: 6 (lower is better) Translates to: MHALWSNWIVMI*LEALVLFPAAX Trigger: NNGGGCTGCTGGAAAAAGGACCAGTGCTTCCAACCAAATCATGACGATCCAGTTACTCCACAACGCATGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS CCA 72 bp | ACGAGAGGATCCATGATGCATGCGTTGTGGAGTAACTaGATCGTCATGATTTGGTTGGAAGCACTGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TRGSMMHALWSN*IVMIWLEALVL Trigger: AAGGACCAGTGCTTCCAACCAAATCATGACGATCCAGTTACTCCACAACGCATGCATCATGGATCCTCTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS CAA 72 bp | TCCAACTTTAGCTCCTCTATGTGTGTGTTAAGAGCCTaGGGGAACGGGAAGTTCTGTTCTTCTGTGTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SNFSSSMCVLRA*GNGKFCSSVSV Trigger: CACGGACACAGAAGAACAGAACTTCCCGTTCCCCAAGGCTCTTAACACACACATAGAGGAGCTAAAGTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040368.3 ENSMUST00000224618.2 ENSMUST00000225357.2 |
||
| CDS CAA 90 bp | AGGAGGACATCCAACTTTAGCTCCTCTATGTGTGTGTTAAGAGCCTaGGGGAACGGGAAGTTCTGTTCTTCTGTGTCCGTGTTAGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RRTSNFSSSMCVLRA*GNGKFCSSVSVLAV Trigger: TACAGCTAACACGGACACAGAAGAACAGAACTTCCCGTTCCCCAAGGCTCTTAACACACACATAGAGGAGCTAAAGTTGGATGTCCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040368.3 ENSMUST00000224618.2 ENSMUST00000225357.2 |
||
| CDS TCA 72 bp | AGATGGGGTGGCAAAGCTTTCTTCTTCAAAGGAGCCTaGGGTAACTTCAACAGTCAAGCTACCGATAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RWGGKAFFFKGA*GNFNSQATDSL Trigger: CAAACTATCGGTAGCTTGACTGTTGAAGTTACCTCAGGCTCCTTTGAAGAAGAAAGCTTTGCCACCCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS CCA 72 bp | GCCTTGAATTTCGTTTTCATGAGACAGACTACCTCGTaGAGTTTCATAGGTAACGCTATTCCTGTGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALNFVFMRQTTS*SFIGNAIPVAG Trigger: TCCTGCCACAGGAATAGCGTTACCTATGAAACTCCACGAGGTAGTCTGTCTCATGAAAACGAAATTCAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS CCA 72 bp | CTACCGATAGTTTGGTACAGTGAAGAAAGTTCATCTTaGAGGAAGCTGGCAGAAGACGGATGCTGTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPIVWYSEESSS*RKLAEDGCCSK Trigger: TTTGGAACAGCATCCGTCTTCTGCCAGCTTCCTCCAAGATGAACTTTCTTCACTGTACCAAACTATCGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS CAA 72 bp | GAACTGATCATTTTCTTCACCTCTTTATGGGCATCCTaGTCCTCTTTGGTGACAACAGGCAGTAGCAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: ELIIFFTSLWAS*SSLVTTGSSNA Trigger: GGCATTGCTACTGCCTGTTGTCACCAAAGAGGACAAGGATGCCCATAAAGAGGTGAAGAAAATGATCAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 ENSMUST00000226004.2 |
||
| CDS CAA 90 bp | TGTGGTCACAGAGTAGCTCAAAACTCTCCATTTTGTGAGACTCATTaGTCCGCAAATGGTCTGCCTTCTGAAGGAGGACATCCAACTTTA | + |
|
Preference number: 6 (lower is better) Translates to: CGHRVAQNSPFCETH*SANGLPSEGGHPTL Trigger: TAAAGTTGGATGTCCTCCTTCAGAAGGCAGACCATTTGCGGACAAATGAGTCTCACAAAATGGAGAGTTTTGAGCTACTCTGTGACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040368.3 ENSMUST00000224618.2 ENSMUST00000225357.2 |
||
| CDS CCA 72 bp | CCTGAGGTAACTTCAACAGTCAAGCTACCGATAGTTTaGTACAGTGAAGAAAGTTCATCTTGGAGGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PEVTSTVKLPIV*YSEESSSWRKL Trigger: CAGCTTCCTCCAAGATGAACTTTCTTCACTGTACCAAACTATCGGTAGCTTGACTGTTGAAGTTACCTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS CAA 72 bp | AGAGTAGCTCAAAACTCTCCATTTTGTGAGACTCATTaGTCCGCAAATGGTCTGCCTTCTGAAGGAGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: RVAQNSPFCETH*SANGLPSEGGH Trigger: ATGTCCTCCTTCAGAAGGCAGACCATTTGCGGACAAATGAGTCTCACAAAATGGAGAGTTTTGAGCTACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040368.3 ENSMUST00000224618.2 ENSMUST00000225357.2 |
||
| CDS CAA 72 bp | ATTTTCTTCACCTCTTTATGGGCATCCTTGTCCTCTTaGGTGACAACAGGCAGTAGCAATGCCAAGTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: IFFTSLWASLSS*VTTGSSNAKLQ Trigger: CTGTAACTTGGCATTGCTACTGCCTGTTGTCACCAAAGAGGACAAGGATGCCCATAAAGAGGTGAAGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 ENSMUST00000226004.2 |
||
| CDS CAA 90 bp | ATTGTCTCTTTAAGGAATCTGATTTCCTCCTTCAGTTCTTCCATGTaGGTCAGTAGCTCGTTTAGCTTTTCCAGGATCTGGAGTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: IVSLRNLISSFSSSM*VSSSFSFSRIWSCL Trigger: GAGGCAACTCCAGATCCTGGAAAAGCTAAACGAGCTACTGACCAACATGGAAGAACTGAAGGAGGAAATCAGATTCCTTAAAGAGACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040368.3 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||
| CDS CAA 90 bp | CTCTTCAAAGAACTGATCATTTTCTTCACCTCTTTATGGGCATCCTaGTCCTCTTTGGTGACAACAGGCAGTAGCAATGCCAAGTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: LFKELIIFFTSLWAS*SSLVTTGSSNAKLQ Trigger: CTGTAACTTGGCATTGCTACTGCCTGTTGTCACCAAAGAGGACAAGGATGCCCATAAAGAGGTGAAGAAAATGATCAGTTCTTTGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 ENSMUST00000226004.2 |
||
| CDS TCA 72 bp | TCTGAAGAATTCGCGGCACTGGAGGTTAAGTCTTCCTaGGAATCAAAGTTAACTCTACTTCCCTGTTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SEEFAALEVKSS*ESKLTLLPCCF Trigger: GAAACAACAGGGAAGTAGAGTTAACTTTGATTCTCAGGAAGACTTAACCTCCAGTGCCGCGAATTCTTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS TCA 72 bp | CCATGCTCTTGGTTATCAGCACCAGACACATTTACTTaGCTGGAAGAAGAAATAACAGTCGGAAGAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PCSWLSAPDTFT*LEEEITVGREK Trigger: CTTCTCTCTTCCGACTGTTATTTCTTCTTCCAGTCAAGTAAATGTGTCTGGTGCTGATAACCAAGAGCATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS TCA 72 bp | AACTTCAACAGTCAAGCTACCGATAGTTTGGTACAGTaGAGAAAGTTCATCTTGGAGGAAGCTGGCAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: NFNSQATDSLVQ*RKFILEEAGRR Trigger: TCTTCTGCCAGCTTCCTCCAAGATGAACTTTCTTCACTGTACCAAACTATCGGTAGCTTGACTGTTGAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS CCA 72 bp | AAGCCTCCTGAGGTTCCCCAAGTTCAACATAACACTTaGCTGTATACATATAGTTGGACATGGAATAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: KPPEVPQVQHNT*LYTYSWTWNNQ Trigger: CTGGTTATTCCATGTCCAACTATATGTATACAGCCAAGTGTTATGTTGAACTTGGGGAACCTCAGGAGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS CAA 72 bp | TTAAGGAATCTGATTTCCTCCTTCAGTTCTTCCATGTaGGTCAGTAGCTCGTTTAGCTTTTCCAGGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRNLISSFSSSM*VSSSFSFSRIW Trigger: CCAGATCCTGGAAAAGCTAAACGAGCTACTGACCAACATGGAAGAACTGAAGGAGGAAATCAGATTCCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040368.3 ENSMUST00000223924.2 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||
| CDS CAA 72 bp | GCCATGCTCTTGGTTATCAGCACCAGACACATTTACTaGACTGGAAGAAGAAATAACAGTCGGAAGAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AMLLVISTRHIY*TGRRNNSRKRE Trigger: TTCTCTCTTCCGACTGTTATTTCTTCTTCCAGTCAAGTAAATGTGTCTGGTGCTGATAACCAAGAGCATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086570.3 |
||
| CDS CAA 72 bp | GGCTGTATACATATAGTTGGACATGGAATAACCAGGTaGCAGTTCTTCAGTCTTAAGGAAGTTGTGCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GCIHIVGHGITR*QFFSLKEVVQS Trigger: GCTTTGCACAACTTCCTTAAGACTGAAGAACTGCAACCTGGTTATTCCATGTCCAACTATATGTATACAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 |
||
| CDS CAA 90 bp | GAACTGATCATTTTCTTCACCTCTTTATGGGCATCCTTGTCCTCTTaGGTGACAACAGGCAGTAGCAATGCCAAGTTACAGAATTTACAA | + |
|
Preference number: 6 (lower is better) Translates to: ELIIFFTSLWASLSS*VTTGSSNAKLQNLQ Trigger: TTGTAAATTCTGTAACTTGGCATTGCTACTGCCTGTTGTCACCAAAGAGGACAAGGATGCCCATAAAGAGGTGAAGAAAATGATCAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040368.3 ENSMUST00000225357.2 ENSMUST00000226004.2 |
||
| CDS CCA 72 bp | CCCTCCGAATTCATCTTGTATACATTCCTCCAGCTTTaGAATTGTCTCTTTAAGGAATCTGATTTCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSEFILYTFLQL*NCLFKESDFLL Trigger: AAGGAGGAAATCAGATTCCTTAAAGAGACAATTCCAAAGCTGGAGGAATGTATACAAGATGAATTCGGAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040368.3 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||
| CDS CAA 72 bp | GATCTTATGAACTGTCACCTTCCCTCCGAATTCATCTaGTATACATTCCTCCAGCTTTGGAATTGTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: DLMNCHLPSEFI*YTFLQLWNCLF Trigger: AAAGAGACAATTCCAAAGCTGGAGGAATGTATACAAGATGAATTCGGAGGGAAGGTGACAGTTCATAAGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040368.3 ENSMUST00000224014.2 ENSMUST00000225357.2 |
||