Pregenerated sensors for RMC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024410Ensembl transcript IDs: ENSMUST00000025276.15, ENSMUST00000126523.9, ENSMUST00000134046.8, ENSMUST00000138866.2, ENSMUST00000155431.8, ENSMUST00000234457.2, ENSMUST00000234982.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACCACCAACCAGAGATAGTGGGAAAGAAAGGATACAGGGGAAGTaGACCTGTTTAGAAATGGTTCTTTGGAGCAGATCCTGTCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: PPPTRDSGKERIQGK*TCLEMVLWSRSCLH Trigger: ATGCAGACAGGATCTGCTCCAAAGAACCATTTCTAAACAGGTCCACTTCCCCTGTATCCTTTCTTTCCCACTATCTCTGGTTGGTGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234982.2 |
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| 3UTR TCA 90 bp | TTGTGTAGCTCTGATCAGCATCCAAGTACTTCTTATACTCATGGTTaGGTTTATCAAACACGGTGGCTATCACAGGCAGCGTGGCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: LCSSDQHPSTSYTHG*VYQTRWLSQAAWLC Trigger: ACAGAGCCACGCTGCCTGTGATAGCCACCGTGTTTGATAAACTCAACCATGAGTATAAGAAGTACTTGGATGCTGATCAGAGCTACACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| 3UTR CAA 90 bp | CTAAGTTTAGTTGACTTCGGTGCAGCTGGTAACTCAATCTCGAACTaGGGAAGCTTCGACATGGTGCCAGCCCTAAAATGGAAAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LSLVDFGAAGNSISN*GSFDMVPALKWKGC Trigger: GCAGCCTTTCCATTTTAGGGCTGGCACCATGTCGAAGCTTCCCAAGTTCGAGATTGAGTTACCAGCTGCACCGAAGTCAACTAAACTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR-3UTR CCA 90 bp | GATCACGGCGCTCTCGGGGCAATACGTGTACCAGTTCACATTGATGTTGTGACTGTATGTTGGCATTCTTaGTCTTGCACTCTTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: DHGALGAIRVPVHIDVVTVCWHS*SCTLVC Trigger: ACACACAAGAGTGCAAGACCAAGAATGCCAACATAC...AGTCACAACATCAATGTGAACTGGTACACGTATTGCCCCGAGAGCGCCGTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR-3UTR CCA 90 bp | CGACATGGTGCCAGCCCTAAAATGGAAAGGCTGCAGGACATTCTCAAGGACTGTAGAATCCGAGTATGTTaGCATTCTTGGTCTTGCACT | + |
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Preference number: 2 (lower is better) Translates to: RHGASPKMERLQDILKDCRIRVC*HSWSCT Trigger: AGTGCAAGACCAAGAATGCCAACATACTCGGATTCT...ACAGTCCTTGAGAATGTCCTGCAGCCTTTCCATTTTAGGGCTGGCACCATGTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR-3UTR CCA 90 bp | CGTTCTGAAAGGCTAAGTTTAGTTGACTTCGGTGCAGCTGGTAACTCAATCTCGGTGCCAGCCCTAAAATaGAAAGGCTGCAGGACATTC | + |
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Preference number: 2 (lower is better) Translates to: RSERLSLVDFGAAGNSISVPALK*KGCRTF Trigger: GAATGTCCTGCAGCCTTTCCATTTTAGGGCTGGCAC...CGAGATTGAGTTACCAGCTGCACCGAAGTCAACTAAACTTAGCCTTTCAGAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR-3UTR TCA 90 bp | CGACATGGTGCCAGCCCTAAAATGGAAAGGCTGCAGGACATTCTCAAGGACTGTTTCACATTGATGTTGTaGCTCTTCAGGAGTTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RHGASPKMERLQDILKDCFTLML*LFRSLR Trigger: TCTCAAACTCCTGAAGAGTCACAACATCAATGTGAA...ACAGTCCTTGAGAATGTCCTGCAGCCTTTCCATTTTAGGGCTGGCACCATGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR CAA 90 bp | TTTGAGACTTCGTTTCTCAGGCATCACCTGGTAAAATTCGATGCCTaGGTCAGTTATGAAGACGATCTCAGTAGAGCTGGTCCAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: FETSFLRHHLVKFDA*VSYEDDLSRAGPAE Trigger: TTCTGCTGGACCAGCTCTACTGAGATCGTCTTCATAACTGACCAAGGCATCGAATTTTACCAGGTGATGCCTGAGAAACGAAGTCTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTCGACATGGTGCCAGCCCTAAAATGGAAAGGCTGCAGGACATTCTCAAGTGTGTGTACTCCAGTTaGGAGTTATCTGGAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: KLRHGASPKMERLQDILKCVYSS*ELSGIK Trigger: TTTTATTCCAGATAACTCTCAACTGGAGTACACACA...CTTGAGAATGTCCTGCAGCCTTTCCATTTTAGGGCTGGCACCATGTCGAAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCAAGTACTTCTTATACTCATGGTTGAGTTTATCAAACACGGTGGCTATCACCTCACTCAGCATCTGTaGACACACAGACAGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: IQVLLILMVEFIKHGGYHLTQHL*THRQNH Trigger: GTGGTTCTGTCTGTGTGTTCACAGATGCTGAGTGAG...GTGATAGCCACCGTGTTTGATAAACTCAACCATGAGTATAAGAAGTACTTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| 3UTR-3UTR CCA 90 bp | AGCATCCAAGTACTTCTTATACTCATGGTTGAGTTTATCAAACACGGTGGCTATTTGCACTCCTTCCTCTaGAGGAGAAAGTCCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: SIQVLLILMVEFIKHGGYLHSFL*RRKSIS Trigger: GCTGATGGACTTTCTCCTCCAGAGGAAGGAGTGCAA...ATAGCCACCGTGTTTGATAAACTCAACCATGAGTATAAGAAGTACTTGGATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| 3UTR CCA 72 bp | AATGGAAAGGCTGCAGGACATTCTCAAGGACTGTGGTaGACAGCAGGATCACGGCGCTCTCGGGGCAATACG | + |
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Preference number: 3 (lower is better) Translates to: NGKAAGHSQGLW*TAGSRRSRGNT Trigger: CGTATTGCCCCGAGAGCGCCGTGATCCTGCTGTCCACCACAGTCCTTGAGAATGTCCTGCAGCCTTTCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR GCA 72 bp | TCAGCATCTGTGAACACACAGACAGAACCACCGCCTTaGACTCCTTCCTCTGGAGGAGAAAGTCCATCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SASVNTQTEPPP*TPSSGGESPSA Trigger: GGCTGATGGACTTTCTCCTCCAGAGGAAGGAGTGCAAGGCGGTGGTTCTGTCTGTGTGTTCACAGATGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| 3UTR GCA 72 bp | AGCTTCGACATGGTGCCAGCCCTAAAATGGAAAGGCTaGAGGACATTCTCAAGGACTGTGGTGGACAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SFDMVPALKWKG*RTFSRTVVDSR Trigger: CCTGCTGTCCACCACAGTCCTTGAGAATGTCCTGCAGCCTTTCCATTTTAGGGCTGGCACCATGTCGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR-3UTR CAA 90 bp | CTTCTTATACTCATGGTTGAGTTTATCAAACACGGTGGCTATCACAGGCAGCGTGACAGAACCACCGCCTaGCACTCCTTCCTCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LLILMVEFIKHGGYHRQRDRTTA*HSFLWR Trigger: CCTCCAGAGGAAGGAGTGCAAGGCGGTGGTTCTGTC...ACGCTGCCTGTGATAGCCACCGTGTTTGATAAACTCAACCATGAGTATAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| 3UTR CCA 72 bp | AGCTGGTCCAGCAGAATCCGAGTATGTTGGCATTCTTaGTCTTGCACTCTTGTGTGTACTCCAGTTGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: SWSSRIRVCWHS*SCTLVCTPVES Trigger: ACTCTCAACTGGAGTACACACAAGAGTGCAAGACCAAGAATGCCAACATACTCGGATTCTGCTGGACCAGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR-3UTR CAA 90 bp | CCGTATATGGTCGCCATCGCAATGTCTCGTTCTGAAAGGCTAAGTTTAGTTGACAACTCAATCTCGAACTaGGGAAGCTTCGACATGGTG | + |
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Preference number: 3 (lower is better) Translates to: PYMVAIAMSRSERLSLVDNSISN*GSFDMV Trigger: CACCATGTCGAAGCTTCCCAAGTTCGAGATTGAGTT...GTCAACTAAACTTAGCCTTTCAGAACGAGACATTGCGATGGCGACCATATACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCTTCGACATGGTGCCAGCCCTAAAATGGAAAGGCTGCAGGACATTCTCAAGGTAAAATTCGATGCCTaGGTCAGTTATGAAGACGAT | + |
|
Preference number: 3 (lower is better) Translates to: KLRHGASPKMERLQDILKVKFDA*VSYEDD Trigger: ATCGTCTTCATAACTGACCAAGGCATCGAATTTTAC...CTTGAGAATGTCCTGCAGCCTTTCCATTTTAGGGCTGGCACCATGTCGAAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR GCA 72 bp | TCCAGCAGAATCCGAGTATGTTGGCATTCTTGGTCTTaGACTCTTGTGTGTACTCCAGTTGAGAGTTATCTG | + |
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Preference number: 3 (lower is better) Translates to: SSRIRVCWHSWS*TLVCTPVESYL Trigger: CAGATAACTCTCAACTGGAGTACACACAAGAGTGCAAGACCAAGAATGCCAACATACTCGGATTCTGCTGGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR TCA 72 bp | TCTGATCAGCATCCAAGTACTTCTTATACTCATGGTTaGGTTTATCAAACACGGTGGCTATCACAGGCAGCG | + |
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Preference number: 3 (lower is better) Translates to: SDQHPSTSYTHG*VYQTRWLSQAA Trigger: CGCTGCCTGTGATAGCCACCGTGTTTGATAAACTCAACCATGAGTATAAGAAGTACTTGGATGCTGATCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| CDS-3UTR GCA 90 bp | CAAGGACTGTGGTGGACAGCAGGATCACGGCGCTCTCGGGGCAATACGTGTACCGCCTTCGCAGTCCTCTaGACAGCCAGGATCTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: QGLWWTAGSRRSRGNTCTAFAVL*TARILF Trigger: AAACAAGATCCTGGCTGTGCAGAGGACTGCGAAGGC...GGTACACGTATTGCCCCGAGAGCGCCGTGATCCTGCTGTCCACCACAGTCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| CDS-3UTR CCA 90 bp | TCTGTGAACACACAGACAGAACCACCGCCTTGCACTCCTTCCTCTGGAGGAGAAGGACAGGAGACTGGCTaGTCACGGCTGCAGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: SVNTQTEPPPCTPSSGGEGQETG*SRLQDL Trigger: CAGGTCCTGCAGCCGTGACCAGCCAGTCTCCTGTCC...TTCTCCTCCAGAGGAAGGAGTGCAAGGCGGTGGTTCTGTCTGTGTGTTCACAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| CDS-3UTR CCA 90 bp | TCTGTGAACACACAGACAGAACCACCGCCTTGCACTCCTTCCTCTGGAGGAGAACAGGGGACAGGAGACTaGCTGGTCACGGCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SVNTQTEPPPCTPSSGGEQGTGD*LVTAAG Trigger: TCCTGCAGCCGTGACCAGCCAGTCTCCTGTCCCCTG...TTCTCCTCCAGAGGAAGGAGTGCAAGGCGGTGGTTCTGTCTGTGTGTTCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTGGGGAATCGGTTAAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGTTCGCCTTCTCGAACTaGACCGGCCGCTCGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: TAGESVKLLTPLSLGSFPFAFSN*TGRSHS Trigger: GCTGTGCGAGCGGCCGGTGCAGTTCGAGAAGGCGAA...CGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTTAACCGATTCCCCAGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR GCA 90 bp | AAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGCCCTCGTGCAGGCTTGCCGCCTTCGCAGTCCTCTaGACAGCCAGGATCTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: KLLTPLSLGSFPPSCRLAAFAVL*TARILF Trigger: AAACAAGATCCTGGCTGTGCAGAGGACTGCGAAGGC...GGCAAGCCTGCACGAGGGCGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CCA 90 bp | AAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGCCCTCGTGCAGGCTTGCCGGGATTCCTATCATCTaGGCCTTTAACGACCACTCC | + |
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Preference number: 4 (lower is better) Translates to: KLLTPLSLGSFPPSCRLAGIPII*AFNDHS Trigger: GGAGTGGTCGTTAAAGGCCCAGATGATAGGAATCCC...GGCAAGCCTGCACGAGGGCGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CCA 90 bp | ACTGCTGGGGAATCGGTTAAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGTCTCAAGGACTGTGGTaGACAGCAGGATCACGGCGC | + |
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Preference number: 4 (lower is better) Translates to: TAGESVKLLTPLSLGSFPSQGLW*TAGSRR Trigger: GCGCCGTGATCCTGCTGTCCACCACAGTCCTTGAGA...CGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTTAACCGATTCCCCAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CCA 90 bp | AAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGCCCTCGTGCAGGCTTGCCGTGCCAGCCCTAAAATaGAAAGGCTGCAGGACATTC | + |
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Preference number: 4 (lower is better) Translates to: KLLTPLSLGSFPPSCRLAVPALK*KGCRTF Trigger: GAATGTCCTGCAGCCTTTCCATTTTAGGGCTGGCAC...GGCAAGCCTGCACGAGGGCGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR TCA 90 bp | AAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGCCCTCGTGCAGGCTTGCCGACTCTTCAGGAGTTTaGGACTTCGTTTCTCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: KLLTPLSLGSFPPSCRLADSSGV*DFVSQA Trigger: TGCCTGAGAAACGAAGTCTCAAACTCCTGAAGAGTC...GGCAAGCCTGCACGAGGGCGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR GCA 90 bp | AAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGCCCTCGTGCAGGCTTGCCCGAACAGCAAAAACCTaGTTGTTGGCCTCATCGAAG | + |
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Preference number: 4 (lower is better) Translates to: KLLTPLSLGSFPPSCRLARTAKT*LLASSK Trigger: CTTCGATGAGGCCAACAAGCAGGTTTTTGCTGTTCG...GGCAAGCCTGCACGAGGGCGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CCA 90 bp | AAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGCCCTCGTGCAGGCTTGCCACTCAATCTCGAACTTaGGAAGCTTCGACATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: KLLTPLSLGSFPPSCRLATQSRT*EASTWC Trigger: GCACCATGTCGAAGCTTCCCAAGTTCGAGATTGAGT...GGCAAGCCTGCACGAGGGCGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CCA 90 bp | GCAGCTGGTAACTCAATCTCGAACTTGGGAAGCTTCGACATGGTGCCAGCCCTAGTCCATCCTGCTTGTTaGCCTCATCGAAGAACACGC | + |
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Preference number: 4 (lower is better) Translates to: AAGNSISNLGSFDMVPALVHPAC*PHRRTR Trigger: GCGTGTTCTTCGATGAGGCCAACAAGCAGGATGGAC...TAGGGCTGGCACCATGTCGAAGCTTCCCAAGTTCGAGATTGAGTTACCAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| CDS-3UTR TCA 90 bp | GGGGAAGTGGACCTGTTTAGAAATGGTTCTTTGGAGCAGATCCTGTCTGCATTACACCAATGCCCCGGATaGACCTCAGGGCAGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: GEVDLFRNGSLEQILSALHQCPG*TSGQPT Trigger: TGTTGGCTGCCCTGAGGTTCATCCGGGGCATTGGTG...TAATGCAGACAGGATCTGCTCCAAAGAACCATTTCTAAACAGGTCCACTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234982.2 |
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| CDS-3UTR GCA 90 bp | TTTGAGACTTCGTTTCTCAGGCATCACCTGGTAAAATTCGATGCCTTGGTCAGTTTCGCCTTCTCGAACTaGACCGGCCGCTCGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: FETSFLRHHLVKFDALVSFAFSN*TGRSHS Trigger: GCTGTGCGAGCGGCCGGTGCAGTTCGAGAAGGCGAA...ACTGACCAAGGCATCGAATTTTACCAGGTGATGCCTGAGAAACGAAGTCTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| CDS-3UTR GCA 90 bp | AAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGCCCTCGTGCAGGCTTGCCTGGCATTCTTGGTCTTaGACTCTTGTGTGTACTCCA | + |
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Preference number: 4 (lower is better) Translates to: KLLTPLSLGSFPPSCRLAWHSWS*TLVCTP Trigger: TGGAGTACACACAAGAGTGCAAGACCAAGAATGCCA...GGCAAGCCTGCACGAGGGCGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CCA 90 bp | TACTCATGGTTGAGTTTATCAAACACGGTGGCTATCACAGGCAGCGTGGCTCTGGCTGGAAGCACAGGATaGTGGAAGGTAACCGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: YSWLSLSNTVAITGSVALAGSTG*WKVTVP Trigger: TGGCACGGTTACCTTCCACCATCCTGTGCTTCCAGC...CAGAGCCACGCTGCCTGTGATAGCCACCGTGTTTGATAAACTCAACCATGAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| CDS-3UTR CCA 90 bp | AAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGCCCTCGTGCAGGCTTGCCGTATGTTGGCATTCTTaGTCTTGCACTCTTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: KLLTPLSLGSFPPSCRLAVCWHS*SCTLVC Trigger: ACACACAAGAGTGCAAGACCAAGAATGCCAACATAC...GGCAAGCCTGCACGAGGGCGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| 3UTR CAA 72 bp | GTTGACTTCGGTGCAGCTGGTAACTCAATCTCGAACTaGGGAAGCTTCGACATGGTGCCAGCCCTAAAATGG | + |
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Preference number: 4 (lower is better) Translates to: VDFGAAGNSISN*GSFDMVPALKW Trigger: CCATTTTAGGGCTGGCACCATGTCGAAGCTTCCCAAGTTCGAGATTGAGTTACCAGCTGCACCGAAGTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| CDS-3UTR TCA 90 bp | AAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGCCCTCGTGCAGGCTTGCCTTTCTAAAGAAAACTTaGTGCACTTCACCTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KLLTPLSLGSFPPSCRLAFLKKT*CTSPLL Trigger: GAGGAGAGGTGAAGTGCATCAAGTTTTCTTTAGAAA...GGCAAGCCTGCACGAGGGCGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CCA 90 bp | ACTGCTGGGGAATCGGTTAAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGCAAAAACCTGCTTGTTaGCCTCATCGAAGAACACGC | + |
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Preference number: 4 (lower is better) Translates to: TAGESVKLLTPLSLGSFPQKPAC*PHRRTR Trigger: GCGTGTTCTTCGATGAGGCCAACAAGCAGGTTTTTG...CGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTTAACCGATTCCCCAGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CCA 90 bp | TATCAAACACGGTGGCTATCACAGGCAGCGTGGCTCTGTCTGACTCACTCAGCAGCTGAAGTTTCACCTTaGCTTGCACTGATAATGATG | + |
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Preference number: 4 (lower is better) Translates to: YQTRWLSQAAWLCLTHSAAEVSP*LALIMM Trigger: CATCATTATCAGTGCAAGCCAAGGTGAAACTTCAGC...TGCTGAGTGAGTCAGACAGAGCCACGCTGCCTGTGATAGCCACCGTGTTTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| 3UTR CAA 72 bp | ATCTCAGTAGAGCTGGTCCAGCAGAATCCGAGTATGTaGGCATTCTTGGTCTTGCACTCTTGTGTGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: ISVELVQQNPSM*AFLVLHSCVYS Trigger: GGAGTACACACAAGAGTGCAAGACCAAGAATGCCAACATACTCGGATTCTGCTGGACCAGCTCTACTGAGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| CDS-3UTR TCA 90 bp | ACGGTGGCTATCACAGGCAGCGTGGCTCTGTCTGACTCACTCAGCATCTGTGAATTGAAAGACGATCCATaGAGAGGAATAGAGTTTACA | + |
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Preference number: 4 (lower is better) Translates to: TVAITGSVALSDSLSICELKDDP*RGIEFT Trigger: TGTAAACTCTATTCCTCTTCATGGATCGTCTTTCAA...TTCACAGATGCTGAGTGAGTCAGACAGAGCCACGCTGCCTGTGATAGCCACCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTGGGGAATCGGTTAAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGCTAAAATGGAAAGGCTaGAGGACATTCTCAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: TAGESVKLLTPLSLGSFPLKWKG*RTFSRT Trigger: AGTCCTTGAGAATGTCCTGCAGCCTTTCCATTTTAG...CGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTTAACCGATTCCCCAGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CCA 90 bp | ACTGCTGGGGAATCGGTTAAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGAGAATCCGAGTATGTTaGCATTCTTGGTCTTGCACT | + |
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Preference number: 4 (lower is better) Translates to: TAGESVKLLTPLSLGSFPRIRVC*HSWSCT Trigger: AGTGCAAGACCAAGAATGCCAACATACTCGGATTCT...CGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTTAACCGATTCCCCAGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CCA 90 bp | AGAAATGGTTCTTTGGAGCAGATCCTGTCTGCATTATCAGGAAACCAGCAATTCTTCCCTCGCAGGCGCTaGTTCCGCTGTTCAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: RNGSLEQILSALSGNQQFFPRRR*FRCSKK Trigger: CTTCTTTGAACAGCGGAACCAGCGCCTGCGAGGGAA...GAATTGCTGGTTTCCTGATAATGCAGACAGGATCTGCTCCAAAGAACCATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234982.2 |
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| CDS-3UTR CCA 90 bp | AAGTGGACCTGTTTAGAAATGGTTCTTTGGAGCAGATCCTGTCTGCATTATCAGATACACCAGCAGTGTTaGGATAGGAGCAGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KWTCLEMVLWSRSCLHYQIHQQC*DRSSQA Trigger: GGCCTGGCTGCTCCTATCCCAACACTGCTGGTGTAT...CTGATAATGCAGACAGGATCTGCTCCAAAGAACCATTTCTAAACAGGTCCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234982.2 |
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| CDS-3UTR TCA 90 bp | ACTGCTGGGGAATCGGTTAAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGTTCACATTGATGTTGTaGCTCTTCAGGAGTTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TAGESVKLLTPLSLGSFPFTLML*LFRSLR Trigger: TCTCAAACTCCTGAAGAGTCACAACATCAATGTGAA...CGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTTAACCGATTCCCCAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR TCA 90 bp | GTTTATCAAACACGGTGGCTATCACAGGCAGCGTGGCTCTGTCTGACTCACTCAATAATGATGTCTGGTTaGAAGACGATCCATGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VYQTRWLSQAAWLCLTHSIMMSG*KTIHEE Trigger: CTCTTCATGGATCGTCTTTCAACCAGACATCATTAT...TGAGTGAGTCAGACAGAGCCACGCTGCCTGTGATAGCCACCGTGTTTGATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| CDS-3UTR CCA 90 bp | TGTTTAGAAATGGTTCTTTGGAGCAGATCCTGTCTGCATTATCAGGAAACCAGCGCAGAAATGTTGTCATaGCCACCAATGCCCCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CLEMVLWSRSCLHYQETSAEMLS*PPMPRM Trigger: CATCCGGGGCATTGGTGGCCATGACAACATTTCTGC...GCTGGTTTCCTGATAATGCAGACAGGATCTGCTCCAAAGAACCATTTCTAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234982.2 |
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| CDS-3UTR TCA 90 bp | ACTGCTGGGGAATCGGTTAAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGTGTGTGTACTCCAGTTaGGAGTTATCTGGAATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TAGESVKLLTPLSLGSFPCVYSS*ELSGIK Trigger: TTTTATTCCAGATAACTCTCAACTGGAGTACACACA...CGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTTAACCGATTCCCCAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| 3UTR CAA 72 bp | TCGTTTCTCAGGCATCACCTGGTAAAATTCGATGCCTaGGTCAGTTATGAAGACGATCTCAGTAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLRHHLVKFDA*VSYEDDLSRAG Trigger: ACCAGCTCTACTGAGATCGTCTTCATAACTGACCAAGGCATCGAATTTTACCAGGTGATGCCTGAGAAACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| 3UTR CAA 72 bp | GATACAGGGGAAGTGGACCTGTTTAGAAATGGTTCTTaGGAGCAGATCCTGTCTGCATTATCAGGAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTGEVDLFRNGS*EQILSALSGNQ Trigger: CTGGTTTCCTGATAATGCAGACAGGATCTGCTCCAAAGAACCATTTCTAAACAGGTCCACTTCCCCTGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234982.2 |
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| CDS-3UTR TCA 90 bp | CCGTATATGGTCGCCATCGCAATGTCTCGTTCTGAAAGGCTAAGTTTAGTTGACTTTCTAAAGAAAACTTaGTGCACTTCACCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PYMVAIAMSRSERLSLVDFLKKT*CTSPLL Trigger: GAGGAGAGGTGAAGTGCATCAAGTTTTCTTTAGAAA...GTCAACTAAACTTAGCCTTTCAGAACGAGACATTGCGATGGCGACCATATACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| CDS-3UTR TCA 90 bp | AAGTACTTCTTATACTCATGGTTGAGTTTATCAAACACGGTGGCTATCACAGGCAGATTCACTATGGGCTaGAGTTTCACCTTGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KYFLYSWLSLSNTVAITGRFTMG*SFTLAC Trigger: GCAAGCCAAGGTGAAACTTCAGCCCATAGTGAATCT...GCCTGTGATAGCCACCGTGTTTGATAAACTCAACCATGAGTATAAGAAGTACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| CDS-3UTR CCA 90 bp | CTTCTACTGCCATTGTGTAGCTCTGATCAGCATCCAAGTACTTCTTATACTCATGCAAGAGATTCACTATaGGCTGAAGTTTCACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPLCSSDQHPSTSYTHARDSL*AEVSPW Trigger: CCAAGGTGAAACTTCAGCCCATAGTGAATCTCTTGC...ATGAGTATAAGAAGTACTTGGATGCTGATCAGAGCTACACAATGGCAGTAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| 3UTR CAA 72 bp | GAATCCGAGTATGTTGGCATTCTTGGTCTTGCACTCTaGTGTGTACTCCAGTTGAGAGTTATCTGGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: ESEYVGILGLAL*CVLQLRVIWNK Trigger: TTTATTCCAGATAACTCTCAACTGGAGTACACACAAGAGTGCAAGACCAAGAATGCCAACATACTCGGATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| CDS-3UTR GCA 90 bp | TCCAAGTACTTCTTATACTCATGGTTGAGTTTATCAAACACGGTGGCTATCACAAGTTTCACCTTGGCTTaGACTGATAATGATGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKYFLYSWLSLSNTVAITSFTLA*TDNDVW Trigger: CCAGACATCATTATCAGTGCAAGCCAAGGTGAAACT...TGTGATAGCCACCGTGTTTGATAAACTCAACCATGAGTATAAGAAGTACTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138866.2 |
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| CDS TCA 90 bp | GGTCACGGCTGCAGGACCTGCCAGGGGGATCTCGTAAGGTTGAATTaGTCGGGCTGGAAGCACAGGATGGTGGAAGGTAACCGTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GHGCRTCQGDLVRLN*SGWKHRMVEGNRAI Trigger: GATGGCACGGTTACCTTCCACCATCCTGTGCTTCCAGCCCGATCAATTCAACCTTACGAGATCCCCCTGGCAGGTCCTGCAGCCGTGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025276.15 ENSMUST00000134046.8 ENSMUST00000138866.2 |
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| CDS-3UTR CAA 90 bp | GGACTGTGGTGGACAGCAGGATCACGGCGCTCTCGGGGCAATACGTGTACCAGTCGTCCATCCTGCTTGTaGGCCTCATCGAAGAACACG | + |
|
Preference number: 5 (lower is better) Translates to: GLWWTAGSRRSRGNTCTSRPSCL*ASSKNT Trigger: CGTGTTCTTCGATGAGGCCAACAAGCAGGATGGACG...ACTGGTACACGTATTGCCCCGAGAGCGCCGTGATCCTGCTGTCCACCACAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| CDS CCA 90 bp | GGTGACAGCACCTGTGTGTACACATCAGACTGGTCTACCACTGCTTaGGTTCGCACTGGCCTTTTGAGAGGTGGGTTGCTCCGGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GDSTCVYTSDWSTTA*VRTGLLRGGLLRLC Trigger: GCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGTCTGATGTGTACACACAGGTGCTGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS TCA 90 bp | ACACATCAGACTGGTCTACCACTGCTTGGGTTCGCACTGGCCTTTTaGGAGGTGGGTTGCTCCGGCTCTGCCCTGCTTCTACTGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: THQTGLPLLGFALAF*EVGCSGSALLLLPL Trigger: CAATGGCAGTAGAAGCAGGGCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGTCTGATGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CCA 90 bp | AGACTGGTCTACCACTGCTTGGGTTCGCACTGGCCTTTTGAGAGGTaGGTTGCTCCGGCTCTGCCCTGCTTCTACTGCCATTGTGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLVYHCLGSHWPFER*VAPALPCFYCHCVA Trigger: AGCTACACAATGGCAGTAGAAGCAGGGCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CCA 90 bp | CTGTGTGTACACATCAGACTGGTCTACCACTGCTTGGGTTCGCACTaGCCTTTTGAGAGGTGGGTTGCTCCGGCTCTGCCCTGCTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LCVHIRLVYHCLGSH*PFERWVAPALPCFY Trigger: GTAGAAGCAGGGCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGTCTGATGTGTACACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS TCA 90 bp | AGCTCTCTAGGGACAGCAGCAAGCAAGCCAAAGGCTTGGAGTCGCTaGGCACGTGGTACTGCAGGAACTGGTGCAGCATGTAGAAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSLGTAASKPKAWSR*ARGTAGTGAACRRG Trigger: ACCTCTTCTACATGCTGCACCAGTTCCTGCAGTACCACGTGCTCAGCGACTCCAAGCCTTTGGCTTGCTTGCTGCTGTCCCTAGAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025276.15 ENSMUST00000234457.2 |
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| CDS CCA 90 bp | CGATCCATGAAGAGGAATAGAGTTTACAGGGGACAGGAGACTGGCTaGTCACGGCTGCAGGACCTGCCAGGGGGATCTCGTAAGGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RSMKRNRVYRGQETG*SRLQDLPGGSRKVE Trigger: TTCAACCTTACGAGATCCCCCTGGCAGGTCCTGCAGCCGTGACCAGCCAGTCTCCTGTCCCCTGTAAACTCTATTCCTCTTCATGGATCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025276.15 ENSMUST00000138866.2 |
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| CDS GCA 90 bp | GGTTCGCACTGGCCTTTTGAGAGGTGGGTTGCTCCGGCTCTGCCCTaGTTCTACTGCCATTGTGTAGCTCTGATCAGCATCCAAGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: GSHWPFERWVAPALP*FYCHCVALISIQVL Trigger: AAGTACTTGGATGCTGATCAGAGCTACACAATGGCAGTAGAAGCAGGGCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCAGTGCGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS-3UTR CAA 90 bp | AAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGCCCTCGTGCAGGCTTGCCGCAAAAACCTGCTTGTaGGCCTCATCGAAGAACACG | + |
|
Preference number: 5 (lower is better) Translates to: KLLTPLSLGSFPPSCRLAAKTCL*ASSKNT Trigger: CGTGTTCTTCGATGAGGCCAACAAGCAGGTTTTTGC...GGCAAGCCTGCACGAGGGCGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS TCA 90 bp | CGACGACGACGGCCACTTCCCACATCAGACTTTACCTCTGTGTCCTaGTGGTGGACAACGACCAGGTTGTCCACTACATTTAGGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RRRRPLPTSDFTSVS*WWTTTRLSTTFRAN Trigger: GTTTGCCCTAAATGTAGTGGACAACCTGGTCGTTGTCCACCATCAGGACACAGAGGTAAAGTCTGATGTGGGAAGTGGCCGTCGTCGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS CCA 90 bp | CTCTCCTCTGTCGTCCATCCTAAAAGAGATGGGATTCCTATCATCTaGGCCTTTAACGACCACTCCTGTAGCTCCACCCGACCGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSVVHPKRDGIPII*AFNDHSCSSTRPNS Trigger: GCTGTTCGGTCGGGTGGAGCTACAGGAGTGGTCGTTAAAGGCCCAGATGATAGGAATCCCATCTCTTTTAGGATGGACGACAGAGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025276.15 ENSMUST00000126523.9 |
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| CDS CCA 90 bp | TTGTTTTCCACGAATGGTGACAGCACCTGTGTGTACACATCAGACTaGTCTACCACTGCTTGGGTTCGCACTGGCCTTTTGAGAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LFSTNGDSTCVYTSD*STTAWVRTGLLRGG Trigger: CCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGTCTGATGTGTACACACAGGTGCTGTCACCATTCGTGGAAAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CCA 90 bp | AAAAACCTGCTTGAAAAAGGCAACGTGTTCTTCACAGTGCTCTCCTaGTGTGAAGTTAGGGTTCCCTCGCAGGCGCTGGTTCCGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KNLLEKGNVFFTVLS*CEVRVPSQALVPLF Trigger: GAACAGCGGAACCAGCGCCTGCGAGGGAACCCTAACTTCACACCAGGAGAGCACTGTGAAGAACACGTTGCCTTTTTCAAGCAGGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025276.15 ENSMUST00000234457.2 |
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| CDS TCA 90 bp | TCGCCCCGTAGCCTGATGTCAAATATCACTGACGTCTCTGTGTCCTaGTGGTGGACAACGACCAGGTTGTCCACTACATTTAGGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPRSLMSNITDVSVS*WWTTTRLSTTFRAN Trigger: GTTTGCCCTAAATGTAGTGGACAACCTGGTCGTTGTCCACCATCAGGACACAGAGACGTCAGTGATATTTGACATCAGGCTACGGGGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025276.15 ENSMUST00000134046.8 ENSMUST00000138866.2 |
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| CDS TCA 90 bp | AGAATTTGCGAGCAGAAATGTTGTCATGGCCACCAATGCCCCGGATaGACCTCAGGGCAGCCAACACCTTCAACATGTCCAGAGATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RICEQKCCHGHQCPG*TSGQPTPSTCPEIA Trigger: AGCTATCTCTGGACATGTTGAAGGTGTTGGCTGCCCTGAGGTTCATCCGGGGCATTGGTGGCCATGACAACATTTCTGCTCGCAAATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234457.2 |
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| CDS GCA 90 bp | CTGACTCACTCAGCATCTGTGAACACACAGACAGAACCACCGCCTTaGACTCCTTCCTCTGGAGGAGAAAGTCCATCAGCCTTCCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LTHSASVNTQTEPPP*TPSSGGESPSAFLY Trigger: ATAAAGGAAGGCTGATGGACTTTCTCCTCCAGAGGAAGGAGTGCAAGGCGGTGGTTCTGTCTGTGTGTTCACAGATGCTGAGTGAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS GCA 90 bp | TGGCCTTTTGAGAGGTGGGTTGCTCCGGCTCTGCCCTGCTTCTACTaGCATTGTGTAGCTCTGATCAGCATCCAAGTACTTCTTATACTC | + |
|
Preference number: 5 (lower is better) Translates to: WPFERWVAPALPCFY*HCVALISIQVLLIL Trigger: GAGTATAAGAAGTACTTGGATGCTGATCAGAGCTACACAATGGCAGTAGAAGCAGGGCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS TCA 90 bp | GCTGGTTCCGCTGTTCAAAGAAGCGGAATATGGTATAGAAGAGCATaGCATCGTCGGTCTGCCTCGCAGCATCTAAGAATTTGCGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGSAVQRSGIWYRRA*HRRSASQHLRICEQ Trigger: CTGCTCGCAAATTCTTAGATGCTGCGAGGCAGACCGACGATGTCATGCTCTTCTATACCATATTCCGCTTCTTTGAACAGCGGAACCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025276.15 ENSMUST00000234457.2 ENSMUST00000234982.2 |
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| CDS CCA 90 bp | GCACTCCTTCCTCTGGAGGAGAAAGTCCATCAGCCTTCCTTTATCTaGCAAGAGATTCACTATGGGCTGAAGTTTCACCTGCAGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALLPLEEKVHQPSFI*QEIHYGLKFHLQVP Trigger: TGGAACCTGCAGGTGAAACTTCAGCCCATAGTGAATCTCTTGCCAGATAAAGGAAGGCTGATGGACTTTCTCCTCCAGAGGAAGGAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CCA 90 bp | ATCTGTGAACACACAGACAGAACCACCGCCTTGCACTCCTTCCTCTaGAGGAGAAAGTCCATCAGCCTTCCTTTATCTGGCAAGAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: ICEHTDRTTALHSFL*RRKSISLPLSGKRF Trigger: GAATCTCTTGCCAGATAAAGGAAGGCTGATGGACTTTCTCCTCCAGAGGAAGGAGTGCAAGGCGGTGGTTCTGTCTGTGTGTTCACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS-3UTR CAA 90 bp | ACTGCTGGGGAATCGGTTAAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGACAGCAAAAACCTGCTaGTTGGCCTCATCGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TAGESVKLLTPLSLGSFPTAKTC*LASSKN Trigger: GTTCTTCGATGAGGCCAACAAGCAGGTTTTTGCTGT...CGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTTAACCGATTCCCCAGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CAA 90 bp | ACTGCTGGGGAATCGGTTAAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGAACTCAATCTCGAACTaGGGAAGCTTCGACATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TAGESVKLLTPLSLGSFPNSISN*GSFDMV Trigger: CACCATGTCGAAGCTTCCCAAGTTCGAGATTGAGTT...CGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTTAACCGATTCCCCAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CAA 90 bp | AAGACGATCTCAGTAGAGCTGGTCCAGCAGAATCCGAGTATGTTGGCATTCTTGTGTCGTCCATCCTGCTaGTTGGCCTCATCGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KTISVELVQQNPSMLAFLCRPSC*LASSKN Trigger: GTTCTTCGATGAGGCCAACAAGCAGGATGGACGACA...CAAGAATGCCAACATACTCGGATTCTGCTGGACCAGCTCTACTGAGATCGTCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| CDS TCA 90 bp | AGCTATCACAAACTTGTGCGGCATCTCCTTGTTTTCCACGAATGGTaGCAGCACCTGTGTGTACACATCAGACTGGTCTACCACTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SYHKLVRHLLVFHEW*QHLCVHIRLVYHCL Trigger: CAAGCAGTGGTAGACCAGTCTGATGTGTACACACAGGTGCTGTCACCATTCGTGGAAAACAAGGAGATGCCGCACAAGTTTGTGATAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CCA 90 bp | TCATGGCCACCAATGCCCCGGATGAACCTCAGGGCAGCCAACACCTaGTGTTTAGACAGAAGAACTTCTACTATCTCATCATTTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SWPPMPRMNLRAANT*CLDRRTSTISSFAV Trigger: AACAGCAAATGATGAGATAGTAGAAGTTCTTCTGTCTAAACACCAGGTGTTGGCTGCCCTGAGGTTCATCCGGGGCATTGGTGGCCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS-3UTR CAA 90 bp | ACTGCTGGGGAATCGGTTAAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGGTAAAATTCGATGCCTaGGTCAGTTATGAAGACGAT | + |
|
Preference number: 5 (lower is better) Translates to: TAGESVKLLTPLSLGSFPVKFDA*VSYEDD Trigger: ATCGTCTTCATAACTGACCAAGGCATCGAATTTTAC...CGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTTAACCGATTCCCCAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CAA 90 bp | AAATGGTTCTTTGGAGCAGATCCTGTCTGCATTATCAGGAAACCAGCAATTCAGTTGCGAGCAGAAATGTaGTCATGGCCACCAATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KWFFGADPVCIIRKPAIQLRAEM*SWPPMP Trigger: GGGCATTGGTGGCCATGACAACATTTCTGCTCGCAA...CTGAATTGCTGGTTTCCTGATAATGCAGACAGGATCTGCTCCAAAGAACCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234982.2 |
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| CDS-3UTR CAA 90 bp | TGTTTAGAAATGGTTCTTTGGAGCAGATCCTGTCTGCATTATCAGGAAACCAGCGAACACCAGAGGTTCTaGGCTGTTCCTCTATCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: CLEMVLWSRSCLHYQETSEHQRF*AVPLSA Trigger: CGCTGATAGAGGAACAGCCAAGAACCTCTGGTGTTC...GCTGGTTTCCTGATAATGCAGACAGGATCTGCTCCAAAGAACCATTTCTAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234982.2 |
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| CDS-3UTR CAA 90 bp | ACTGCTGGGGAATCGGTTAAACTGCTCACTCCTTTGAGCTTAGGCTCTTTCCCGTTTTCTAAAGAAAACTaGATGCACTTCACCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TAGESVKLLTPLSLGSFPFSKEN*MHFTSP Trigger: AGGAGAGGTGAAGTGCATCAAGTTTTCTTTAGAAAA...CGGGAAAGAGCCTAAGCTCAAAGGAGTGAGCAGTTTAACCGATTCCCCAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS-3UTR CAA 90 bp | AAATGGTTCTTTGGAGCAGATCCTGTCTGCATTATCAGGAAACCAGCAATTCAGGCAGCATCTAAGAATTaGCGAGCAGAAATGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KWFFGADPVCIIRKPAIQAASKN*RAEMLS Trigger: TGACAACATTTCTGCTCGCAAATTCTTAGATGCTGC...CTGAATTGCTGGTTTCCTGATAATGCAGACAGGATCTGCTCCAAAGAACCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234982.2 |
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| CDS-3UTR CAA 90 bp | AGAATCCGAGTATGTTGGCATTCTTGGTCTTGCACTCTTGTGTGTACTCCAGTTTTTTCTAAAGAAAACTaGATGCACTTCACCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RIRVCWHSWSCTLVCTPVFSKEN*MHFTSP Trigger: AGGAGAGGTGAAGTGCATCAAGTTTTCTTTAGAAAA...AACTGGAGTACACACAAGAGTGCAAGACCAAGAATGCCAACATACTCGGATTCT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
||
| CDS CCA 72 bp | CACATCAGACTGGTCTACCACTGCTTGGGTTCGCACTaGCCTTTTGAGAGGTGGGTTGCTCCGGCTCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HIRLVYHCLGSH*PFERWVAPALP Trigger: GGGCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGTCTGATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
||
| CDS CAA 72 bp | GACTGGTCTACCACTGCTTGGGTTCGCACTGGCCTTTaGAGAGGTGGGTTGCTCCGGCTCTGCCCTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: DWSTTAWVRTGL*RGGLLRLCPAS Trigger: AGAAGCAGGGCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
||
| CDS TCA 72 bp | ACTGGTCTACCACTGCTTGGGTTCGCACTGGCCTTTTaGGAGGTGGGTTGCTCCGGCTCTGCCCTGCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: TGLPLLGFALAF*EVGCSGSALLL Trigger: TAGAAGCAGGGCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CCA 72 bp | AAGAGGAATAGAGTTTACAGGGGACAGGAGACTGGCTaGTCACGGCTGCAGGACCTGCCAGGGGGATCTCGT | + |
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Preference number: 6 (lower is better) Translates to: KRNRVYRGQETG*SRLQDLPGGSR Trigger: ACGAGATCCCCCTGGCAGGTCCTGCAGCCGTGACCAGCCAGTCTCCTGTCCCCTGTAAACTCTATTCCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025276.15 ENSMUST00000138866.2 |
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| CDS CCA 72 bp | TACCACTGCTTGGGTTCGCACTGGCCTTTTGAGAGGTaGGTTGCTCCGGCTCTGCCCTGCTTCTACTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: YHCLGSHWPFER*VAPALPCFYCH Trigger: ATGGCAGTAGAAGCAGGGCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CAA 72 bp | ACTGCTTGGGTTCGCACTGGCCTTTTGAGAGGTGGGTaGCTCCGGCTCTGCCCTGCTTCTACTGCCATTGTG | + |
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Preference number: 6 (lower is better) Translates to: TAWVRTGLLRGG*LRLCPASTAIV Trigger: CACAATGGCAGTAGAAGCAGGGCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CAA 90 bp | TACACATCAGACTGGTCTACCACTGCTTGGGTTCGCACTGGCCTTTaGAGAGGTGGGTTGCTCCGGCTCTGCCCTGCTTCTACTGCCATT | + |
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Preference number: 6 (lower is better) Translates to: YTSDWSTTAWVRTGL*RGGLLRLCPASTAI Trigger: AATGGCAGTAGAAGCAGGGCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGTCTGATGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CAA 90 bp | TCGTCGGTCTGCCTCGCAGCATCTAAGAATTTGCGAGCAGAAATGTaGTCATGGCCACCAATGCCCCGGATGAACCTCAGGGCAGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: SSVCLAASKNLRAEM*SWPPMPRMNLRAAN Trigger: GTTGGCTGCCCTGAGGTTCATCCGGGGCATTGGTGGCCATGACAACATTTCTGCTCGCAAATTCTTAGATGCTGCGAGGCAGACCGACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025276.15 ENSMUST00000234457.2 ENSMUST00000234982.2 |
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| CDS GCA 72 bp | TGGCCTTTTGAGAGGTGGGTTGCTCCGGCTCTGCCCTaGTTCTACTGCCATTGTGTAGCTCTGATCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: WPFERWVAPALP*FYCHCVALISI Trigger: GATGCTGATCAGAGCTACACAATGGCAGTAGAAGCAGGGCAGAGCCGGAGCAACCCACCTCTCAAAAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CCA 72 bp | CCAGAGGTTCTTGGCTGTTCCTCTATCAGCGAAGACTaGTGTGAAGTTAGGGTTCCCTCGCAGGCGCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: PEVLGCSSISED*CEVRVPSQALV Trigger: AACCAGCGCCTGCGAGGGAACCCTAACTTCACACCAGTCTTCGCTGATAGAGGAACAGCCAAGAACCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234982.2 |
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| CDS TCA 72 bp | GAGCAGAAATGTTGTCATGGCCACCAATGCCCCGGATaGACCTCAGGGCAGCCAACACCTTCAACATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: EQKCCHGHQCPG*TSGQPTPSTCP Trigger: TGGACATGTTGAAGGTGTTGGCTGCCCTGAGGTTCATCCGGGGCATTGGTGGCCATGACAACATTTCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234457.2 |
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| CDS GCA 72 bp | CAGCACCTGTGTGTACACATCAGACTGGTCTACCACTaGTTGGGTTCGCACTGGCCTTTTGAGAGGTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: QHLCVHIRLVYH*LGSHWPFERWV Trigger: AACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGTCTGATGTGTACACACAGGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CCA 72 bp | ACCTGTGTGTACACATCAGACTGGTCTACCACTGCTTaGGTTCGCACTGGCCTTTTGAGAGGTGGGTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: TCVYTSDWSTTA*VRTGLLRGGLL Trigger: GAGCAACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGTCTGATGTGTACACACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CAA 72 bp | CACCTGTGTGTACACATCAGACTGGTCTACCACTGCTaGGGTTCGCACTGGCCTTTTGAGAGGTGGGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: HLCVHIRLVYHC*GSHWPFERWVA Trigger: AGCAACCCACCTCTCAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGTCTGATGTGTACACACAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CAA 72 bp | TGCACTTCACCTCTCCTCTGTCGTCCATCCTGCTTGTaGGCCTCATCGAAGAACACGCAGTTAACCGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: CTSPLLCRPSCL*ASSKNTQLTGF Trigger: GAACCCGGTTAACTGCGTGTTCTTCGATGAGGCCAACAAGCAGGATGGACGACAGAGGAGAGGTGAAGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| CDS CCA 72 bp | ACGAATGGTGACAGCACCTGTGTGTACACATCAGACTaGTCTACCACTGCTTGGGTTCGCACTGGCCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: TNGDSTCVYTSD*STTAWVRTGLL Trigger: CAAAAGGCCAGTGCGAACCCAAGCAGTGGTAGACCAGTCTGATGTGTACACACAGGTGCTGTCACCATTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CAA 90 bp | TCTGACTCACTCAGCATCTGTGAACACACAGACAGAACCACCGCCTaGCACTCCTTCCTCTGGAGGAGAAAGTCCATCAGCCTTCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: SDSLSICEHTDRTTA*HSFLWRRKSISLPL Trigger: TAAAGGAAGGCTGATGGACTTTCTCCTCCAGAGGAAGGAGTGCAAGGCGGTGGTTCTGTCTGTGTGTTCACAGATGCTGAGTGAGTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS TCA 72 bp | CGGCCACTTCCCACATCAGACTTTACCTCTGTGTCCTaGTGGTGGACAACGACCAGGTTGTCCACTACATTT | + |
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Preference number: 6 (lower is better) Translates to: RPLPTSDFTSVS*WWTTTRLSTTF Trigger: AAATGTAGTGGACAACCTGGTCGTTGTCCACCATCAGGACACAGAGGTAAAGTCTGATGTGGGAAGTGGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126523.9 |
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| CDS CCA 72 bp | GTCGTCCATCCTAAAAGAGATGGGATTCCTATCATCTaGGCCTTTAACGACCACTCCTGTAGCTCCACCCGA | + |
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Preference number: 6 (lower is better) Translates to: VVHPKRDGIPII*AFNDHSCSSTR Trigger: TCGGGTGGAGCTACAGGAGTGGTCGTTAAAGGCCCAGATGATAGGAATCCCATCTCTTTTAGGATGGACGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025276.15 ENSMUST00000126523.9 |
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| CDS CAA 72 bp | GTGGGTTGCTCCGGCTCTGCCCTGCTTCTACTGCCATaGTGTAGCTCTGATCAGCATCCAAGTACTTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: VGCSGSALLLLP*CSSDQHPSTSY Trigger: ATAAGAAGTACTTGGATGCTGATCAGAGCTACACAATGGCAGTAGAAGCAGGGCAGAGCCGGAGCAACCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CAA 72 bp | ATGACATCGTCGGTCTGCCTCGCAGCATCTAAGAATTaGCGAGCAGAAATGTTGTCATGGCCACCAATGCCC | + |
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Preference number: 6 (lower is better) Translates to: MTSSVCLAASKN*RAEMLSWPPMP Trigger: GGGCATTGGTGGCCATGACAACATTTCTGCTCGCAAATTCTTAGATGCTGCGAGGCAGACCGACGATGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025276.15 ENSMUST00000234457.2 ENSMUST00000234982.2 |
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| CDS CCA 72 bp | CCAATGCCCCGGATGAACCTCAGGGCAGCCAACACCTaGTGTTTAGACAGAAGAACTTCTACTATCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: PMPRMNLRAANT*CLDRRTSTISS Trigger: TGATGAGATAGTAGAAGTTCTTCTGTCTAAACACCAGGTGTTGGCTGCCCTGAGGTTCATCCGGGGCATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025276.15 ENSMUST00000234982.2 |
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| CDS CAA 90 bp | TTCGCAGTCCTCTGCACAGCCAGGATCTTGTTTTCTAAAGAAAACTaGATGCACTTCACCTCTCCTCTGTCGTCCATCCTGCTTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: FAVLCTARILFSKEN*MHFTSPLSSILLVG Trigger: GCCAACAAGCAGGATGGACGACAGAGGAGAGGTGAAGTGCATCAAGTTTTCTTTAGAAAACAAGATCCTGGCTGTGCAGAGGACTGCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| CDS TCA 72 bp | AAACTTGTGCGGCATCTCCTTGTTTTCCACGAATGGTaGCAGCACCTGTGTGTACACATCAGACTGGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: KLVRHLLVFHEW*QHLCVHIRLVY Trigger: GTAGACCAGTCTGATGTGTACACACAGGTGCTGTCACCATTCGTGGAAAACAAGGAGATGCCGCACAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CCA 72 bp | CCTCTGGAGGAGAAAGTCCATCAGCCTTCCTTTATCTaGCAAGAGATTCACTATGGGCTGAAGTTTCACCTG | + |
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Preference number: 6 (lower is better) Translates to: PLEEKVHQPSFI*QEIHYGLKFHL Trigger: CAGGTGAAACTTCAGCCCATAGTGAATCTCTTGCCAGATAAAGGAAGGCTGATGGACTTTCTCCTCCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CAA 72 bp | ATCAGCACAGCTATCACAAACTTGTGCGGCATCTCCTaGTTTTCCACGAATGGTGACAGCACCTGTGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: ISTAITNLCGIS*FSTNGDSTCVY Trigger: GTACACACAGGTGCTGTCACCATTCGTGGAAAACAAGGAGATGCCGCACAAGTTTGTGATAGCTGTGCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS TCA 72 bp | TCTGCACAGCCAGGATCTTGTTTTCTAAAGAAAACTTaGTGCACTTCACCTCTCCTCTGTCGTCCATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SAQPGSCFLKKT*CTSPLLCRPSC Trigger: GCAGGATGGACGACAGAGGAGAGGTGAAGTGCATCAAGTTTTCTTTAGAAAACAAGATCCTGGCTGTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155431.8 |
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| CDS CAA 90 bp | TGGTTCAGAGAACGAATATATTCCATCAGCACAGCTATCACAAACTaGTGCGGCATCTCCTTGTTTTCCACGAATGGTGACAGCACCTGT | + |
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Preference number: 6 (lower is better) Translates to: WFRERIYSISTAITN*CGISLFSTNGDSTC Trigger: ACAGGTGCTGTCACCATTCGTGGAAAACAAGGAGATGCCGCACAAGTTTGTGATAGCTGTGCTGATGGAATATATTCGTTCTCTGAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CAA 90 bp | CAGAATGTTGTAGGCCTCATTAGAGCTTGTTCTCCAAAAACCTGCTaGAAAAAGGCAACGTGTTCTTCACAGTGCTCTCCTGGTGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: QNVVGLIRACSPKTC*KKATCSSQCSPGVK Trigger: CTTCACACCAGGAGAGCACTGTGAAGAACACGTTGCCTTTTTCAAGCAGGTTTTTGGAGAACAAGCTCTAATGAGGCCTACAACATTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025276.15 ENSMUST00000234457.2 |
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| CDS TCA 72 bp | GCTGTTCAAAGAAGCGGAATATGGTATAGAAGAGCATaGCATCGTCGGTCTGCCTCGCAGCATCTAAGAATT | + |
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Preference number: 6 (lower is better) Translates to: AVQRSGIWYRRA*HRRSASQHLRI Trigger: AATTCTTAGATGCTGCGAGGCAGACCGACGATGTCATGCTCTTCTATACCATATTCCGCTTCTTTGAACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025276.15 ENSMUST00000234457.2 ENSMUST00000234982.2 |
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| CDS CAA 72 bp | GAACGAATATATTCCATCAGCACAGCTATCACAAACTaGTGCGGCATCTCCTTGTTTTCCACGAATGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: ERIYSISTAITN*CGISLFSTNGD Trigger: GTCACCATTCGTGGAAAACAAGGAGATGCCGCACAAGTTTGTGATAGCTGTGCTGATGGAATATATTCGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025276.15 |
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| CDS CAA 90 bp | GAGTATGTTGGCATTCTTGGTCTTGCACTCTTGTGTGTACTCCAGTaGAGAGTTATCTGGAATAAAATTACAAAAGTCCACAGCCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: EYVGILGLALLCVLQ*RVIWNKITKVHSLR Trigger: GCGAAGGCTGTGGACTTTTGTAATTTTATTCCAGATAACTCTCAACTGGAGTACACACAAGAGTGCAAGACCAAGAATGCCAACATACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025276.15 ENSMUST00000126523.9 |
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| CDS CAA 72 bp | GGCATTCTTGGTCTTGCACTCTTGTGTGTACTCCAGTaGAGAGTTATCTGGAATAAAATTACAAAAGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GILGLALLCVLQ*RVIWNKITKVH Trigger: GTGGACTTTTGTAATTTTATTCCAGATAACTCTCAACTGGAGTACACACAAGAGTGCAAGACCAAGAATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025276.15 ENSMUST00000126523.9 |
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