Pregenerated sensors for RLBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039194Ensembl transcript IDs: ENSMUST00000053718.15, ENSMUST00000179243.3, ENSMUST00000205442.2, ENSMUST00000205638.2, ENSMUST00000206162.2, ENSMUST00000206320.3
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCATCTAGTGAATGGGGGCCCCAGCACCAAGGATCACATCCAAGATaGGTGGAGAGGAAGGGACATGACCTCCACCCTGGACAGAGTCCA | + |
|
Preference number: 1 (lower is better) Translates to: ASSEWGPQHQGSHPR*VERKGHDLHPGQSP Trigger: TGGACTCTGTCCAGGGTGGAGGTCATGTCCCTTCCTCTCCACCCATCTTGGATGTGATCCTTGGTGCTGGGGCCCCCATTCACTAGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR TCA 90 bp | AGTCCCTTCAGGCATTCCTGTCCCCGGACTTGGGTTCAGGAAAGCTaGAGAAGGACTGGGATGCTAATACGGATCCCATGGCAGGGCATC | + |
|
Preference number: 1 (lower is better) Translates to: SPFRHSCPRTWVQES*RRTGMLIRIPWQGI Trigger: GATGCCCTGCCATGGGATCCGTATTAGCATCCCAGTCCTTCTTCAGCTTTCCTGAACCCAAGTCCGGGGACAGGAATGCCTGAAGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR GCA 90 bp | TCAGAGTCACTGCCCTGTAACTGCAGAGGCAGGTGGGAATTTAACTaGCCCACATATCTCCCGATGAAAGGCATTCCCCTGCCTCACTGC | + |
|
Preference number: 1 (lower is better) Translates to: SESLPCNCRGRWEFN*PTYLPMKGIPLPHC Trigger: GCAGTGAGGCAGGGGAATGCCTTTCATCGGGAGATATGTGGGGCAGTTAAATTCCCACCTGCCTCTGCAGTTACAGGGCAGTGACTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR CCA 90 bp | ATCCAACTTCTCTCAGAGTCACTGCCCTGTAACTGCAGAGGCAGGTaGGAATTTAACTGCCCCACATATCTCCCGATGAAAGGCATTCCC | + |
|
Preference number: 1 (lower is better) Translates to: IQLLSESLPCNCRGR*EFNCPTYLPMKGIP Trigger: GGGAATGCCTTTCATCGGGAGATATGTGGGGCAGTTAAATTCCCACCTGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAGAAGTTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR GCA 90 bp | TTAGTCTTTGAAATCCAACTTCTCTCAGAGTCACTGCCCTGTAACTaGAGAGGCAGGTGGGAATTTAACTGCCCCACATATCTCCCGATG | + |
|
Preference number: 1 (lower is better) Translates to: LVFEIQLLSESLPCN*RGRWEFNCPTYLPM Trigger: CATCGGGAGATATGTGGGGCAGTTAAATTCCCACCTGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAGAAGTTGGATTTCAAAGACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR-3UTR GCA 90 bp | GGGGGCCCCAGCACCAAGGATCACATCCAAGATGGGTGGAGAGGAAGGGACATGTCACTGCCCTGTAACTaGAGAGGCAGGTGGGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: GGPSTKDHIQDGWRGRDMSLPCN*RGRWEF Trigger: AAATTCCCACCTGCCTCTGCAGTTACAGGGCAGTGA...CATGTCCCTTCCTCTCCACCCATCTTGGATGTGATCCTTGGTGCTGGGGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR-3UTR GCA 90 bp | AGATGGGTGGAGAGGAAGGGACATGACCTCCACCCTGGACAGAGTCCAGAGCTCGGGAAACCCCTTATCTaGCTACTGCTGTTAAGATCA | + |
|
Preference number: 2 (lower is better) Translates to: RWVERKGHDLHPGQSPELGKPLI*LLLLRS Trigger: TGATCTTAACAGCAGTAGGCAGATAAGGGGTTTCCC...GAGCTCTGGACTCTGTCCAGGGTGGAGGTCATGTCCCTTCCTCTCCACCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCCTTATCTGCCTACTGCTGTTAAGATCATCAGAGCTTCAAGCCCCTCTCTTTATTCCCCTGCCTCACTaGCCTCTAGGTCGGTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PLICLLLLRSSELQAPLFIPLPH*PLGRFG Trigger: CCCAAACCGACCTAGAGGGCAGTGAGGCAGGGGAAT...AAAGAGAGGGGCTTGAAGCTCTGATGATCTTAACAGCAGTAGGCAGATAAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR-3UTR CCA 90 bp | GGACAGAGTCCAGAGCTCTTAGCTACTAGAGTATTCATCAGCAACTGTGCTAAGTTGCTGGCCCCTCCCTaGAATCCTGGGTGGGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: GQSPELLATRVFISNCAKLLAPP*NPGWET Trigger: GGTTTCCCACCCAGGATTCCAGGGAGGGGCCAGCAA...CTTAGCACAGTTGCTGATGAATACTCTAGTAGCTAAGAGCTCTGGACTCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTCTCAGAGTCACTGCCCTGTAACTGCAGAGGCAGGTGGGAATTTAACTGCAAACCTAGGGAAGTCTaGGAAAACAGTCCCTTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LLSESLPCNCRGRWEFNCKPREV*ENSPFR Trigger: CCTGAAGGGACTGTTTTCCCAGACTTCCCTAGGTTT...GCAGTTAAATTCCCACCTGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCCTTCCACGCCCTAAGTATCAAAGCGATTACAAAGGAAATCACGGAGAAGCCTGGGTTCAGGAAAGCTaGAGAAGGACTGGGATGCTA | + |
|
Preference number: 2 (lower is better) Translates to: CLPRPKYQSDYKGNHGEAWVQES*RRTGML Trigger: TAGCATCCCAGTCCTTCTTCAGCTTTCCTGAACCCA...GGCTTCTCCGTGATTTCCTTTGTAATCGCTTTGATACTTAGGGCGTGGAAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR-3UTR TCA 90 bp | GGACAGAGTCCAGAGCTCTTAGCTACTAGAGTATTCATCAGCAACTGTGCTAAGTGGGTTCAGGAAAGCTaGAGAAGGACTGGGATGCTA | + |
|
Preference number: 2 (lower is better) Translates to: GQSPELLATRVFISNCAKWVQES*RRTGML Trigger: TAGCATCCCAGTCCTTCTTCAGCTTTCCTGAACCCA...CTTAGCACAGTTGCTGATGAATACTCTAGTAGCTAAGAGCTCTGGACTCTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR-3UTR GCA 90 bp | GGACAGAGTCCAGAGCTCTTAGCTACTAGAGTATTCATCAGCAACTGTGCTAAGTCACTGCCCTGTAACTaGAGAGGCAGGTGGGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: GQSPELLATRVFISNCAKSLPCN*RGRWEF Trigger: AAATTCCCACCTGCCTCTGCAGTTACAGGGCAGTGA...CTTAGCACAGTTGCTGATGAATACTCTAGTAGCTAAGAGCTCTGGACTCTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR-3UTR GCA 90 bp | GGACAGAGTCCAGAGCTCTTAGCTACTAGAGTATTCATCAGCAACTGTGCTAAGTTCTCTCAGAGTCACTaGCCTGTAACTGCAGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GQSPELLATRVFISNCAKFSQSH*PVTAEA Trigger: TGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAGAA...CTTAGCACAGTTGCTGATGAATACTCTAGTAGCTAAGAGCTCTGGACTCTGTCC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTTCCACGCCCTAAGTATCAAAGCGATTACAAAGGAAATCACGGAGAAGCCAAACCTAGGGAAGTCTaGGAAAACAGTCCCTTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: CLPRPKYQSDYKGNHGEAKPREV*ENSPFR Trigger: CCTGAAGGGACTGTTTTCCCAGACTTCCCTAGGTTT...GGCTTCTCCGTGATTTCCTTTGTAATCGCTTTGATACTTAGGGCGTGGAAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR CCA 72 bp | GGGGGCCCCAGCACCAAGGATCACATCCAAGATGGGTaGAGAGGAAGGGACATGACCTCCACCCTGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: GGPSTKDHIQDG*RGRDMTSTLDR Trigger: TCTGTCCAGGGTGGAGGTCATGTCCCTTCCTCTCCACCCATCTTGGATGTGATCCTTGGTGCTGGGGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR CCA 72 bp | GAATGGGGGCCCCAGCACCAAGGATCACATCCAAGATaGGTGGAGAGGAAGGGACATGACCTCCACCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EWGPQHQGSHPR*VERKGHDLHPG Trigger: TCCAGGGTGGAGGTCATGTCCCTTCCTCTCCACCCATCTTGGATGTGATCCTTGGTGCTGGGGCCCCCATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR CCA 72 bp | GTGCTAAGGTTGCTGGCCCCTCCCTGGAATCCTGGGTaGGAAACCCCTTATCTGCCTACTGCTGTTAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: VLRLLAPPWNPG*ETPYLPTAVKI Trigger: GATCTTAACAGCAGTAGGCAGATAAGGGGTTTCCCACCCAGGATTCCAGGGAGGGGCCAGCAACCTTAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR CCA 72 bp | TCATCAGCAACTGTGCTAAGGTTGCTGGCCCCTCCCTaGAATCCTGGGTGGGAAACCCCTTATCTGCCTACT | + |
|
Preference number: 3 (lower is better) Translates to: SSATVLRLLAPP*NPGWETPYLPT Trigger: AGTAGGCAGATAAGGGGTTTCCCACCCAGGATTCCAGGGAGGGGCCAGCAACCTTAGCACAGTTGCTGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR TCA 72 bp | AGGCATTCCTGTCCCCGGACTTGGGTTCAGGAAAGCTaGAGAAGGACTGGGATGCTAATACGGATCCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: RHSCPRTWVQES*RRTGMLIRIPW Trigger: CCATGGGATCCGTATTAGCATCCCAGTCCTTCTTCAGCTTTCCTGAACCCAAGTCCGGGGACAGGAATGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR CCA 72 bp | CTCTCAGAGTCACTGCCCTGTAACTGCAGAGGCAGGTaGGAATTTAACTGCCCCACATATCTCCCGATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSESLPCNCRGR*EFNCPTYLPMK Trigger: TTTCATCGGGAGATATGTGGGGCAGTTAAATTCCCACCTGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR TCA 72 bp | CAAGACAAAGAACGGTTTTATTTGCCTAATAAGAACTaGGAGTGTTCGGGGAAGATGTCAAAGGTACATTTA | + |
|
Preference number: 3 (lower is better) Translates to: QDKERFYLPNKN*ECSGKMSKVHL Trigger: TAAATGTACCTTTGACATCTTCCCCGAACACTCTCAGTTCTTATTAGGCAAATAAAACCGTTCTTTGTCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | GTTGCTGGCCCCTCCCTGGAATCCTGGGTGGGAAACCCCTTATCTGCCTACTGCGAAGGCGCTGTCTCTTaGCTGCACCCTCTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VAGPSLESWVGNPLSAYCEGAVS*LHPLSH Trigger: GTGGCTGAGAGGGTGCAGGCAAGAGACAGCGCCTTC...GCAGTAGGCAGATAAGGGGTTTCCCACCCAGGATTCCAGGGAGGGGCCAGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | GAAAGGCATTCCCCTGCCTCACTGCCCTCTAGGTCGGTTTGGGATGAGGTGCCAGAGCTGCTCCAGTTGTaGTCGGAGCTCCTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERHSPASLPSRSVWDEVPELLQL*SELLLL Trigger: GAGGAGCAGGAGCTCCGAGCACAACTGGAGCAGCTC...TGGCACCTCATCCCAAACCGACCTAGAGGGCAGTGAGGCAGGGGAATGCCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | AACTGTGCTAAGGTTGCTGGCCCCTCCCTGGAATCCTGGGTGGGAAACCCCTTACACCCTCTCAGCCACTaGCAGGGCCAATTCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NCAKVAGPSLESWVGNPLHPLSH*QGQFLA Trigger: GGCGAGGAATTGGCCCTGGCAGTGGCTGAGAGGGTG...TAAGGGGTTTCCCACCCAGGATTCCAGGGAGGGGCCAGCAACCTTAGCACAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | CAGTCCCTTCAGGCATTCCTGTCCCCGGACTTGGGTTCAGGAAAGCTGAAGAAGCACCCTCTCAGCCACTaGCAGGGCCAATTCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSLQAFLSPDLGSGKLKKHPLSH*QGQFLA Trigger: GGCGAGGAATTGGCCCTGGCAGTGGCTGAGAGGGTG...CTTCTTCAGCTTTCCTGAACCCAAGTCCGGGGACAGGAATGCCTGAAGGGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | TTTAACTGCCCCACATATCTCCCGATGAAAGGCATTCCCCTGCCTCACTGCCCTCGAGGGGCGGAGCCCTaGTGCCTGCTGCATGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FNCPTYLPMKGIPLPHCPRGAEP*CLLHGE Trigger: TTCACCATGCAGCAGGCAGCAGGGCTCCGCCCCTCG...AGGGCAGTGAGGCAGGGGAATGCCTTTCATCGGGAGATATGTGGGGCAGTTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | GAGTATTCATCAGCAACTGTGCTAAGGTTGCTGGCCCCTCCCTGGAATCCTGGGGTGTGGCGGGGCAGCTaGCTGCATGGGCCAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: EYSSATVLRLLAPPWNPGVWRGS*LHGPKT Trigger: TGTCTTTGGCCCATGCAGCCAGCTGCCCCGCCACAC...CCCAGGATTCCAGGGAGGGGCCAGCAACCTTAGCACAGTTGCTGATGAATACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | GAGTATTCATCAGCAACTGTGCTAAGGTTGCTGGCCCCTCCCTGGAATCCTGGGGAGCTGCTCCAGTTGTaGTCGGAGCTCCTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EYSSATVLRLLAPPWNPGELLQL*SELLLL Trigger: GAGGAGCAGGAGCTCCGAGCACAACTGGAGCAGCTC...CCCAGGATTCCAGGGAGGGGCCAGCAACCTTAGCACAGTTGCTGATGAATACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR TCA 90 bp | AGATGGGTGGAGAGGAAGGGACATGACCTCCACCCTGGACAGAGTCCAGAGCTCCATGATCCTTGGTTGTaGGCTGCTCCAGTTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RWVERKGHDLHPGQSPELHDPWL*AAPVVL Trigger: GAGCACAACTGGAGCAGCTCACAACCAAGGATCATG...GAGCTCTGGACTCTGTCCAGGGTGGAGGTCATGTCCCTTCCTCTCCACCCATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | ACCAAGGATCACATCCAAGATGGGTGGAGAGGAAGGGACATGACCTCCACCCTGCCTCTTCAGGAACCATaGGGAAAGTGCCCACCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TKDHIQDGWRGRDMTSTLPLQEP*GKCPPR Trigger: ACGGGGTGGGCACTTTCCGCATGGTTCCTGAAGAGG...CAGGGTGGAGGTCATGTCCCTTCCTCTCCACCCATCTTGGATGTGATCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | AGTCTGGGAAAACAGTCCCTTCAGGCATTCCTGTCCCCGGACTTGGGTTCAGGACCTCTTCAGGAACCATaGGGAAAGTGCCCACCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLGKQSLQAFLSPDLGSGPLQEP*GKCPPR Trigger: ACGGGGTGGGCACTTTCCGCATGGTTCCTGAAGAGG...TCCTGAACCCAAGTCCGGGGACAGGAATGCCTGAAGGGACTGTTTTCCCAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | CTTCAGGCATTCCTGTCCCCGGACTTGGGTTCAGGAAAGCTGAAGAAGGACTGGTCATCCTTGGCCTTCTaGAAAGTGTGGCGGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQAFLSPDLGSGKLKKDWSSLAF*KVWRGS Trigger: GCTGCCCCGCCACACTTTGCAGAAGGCCAAGGATGA...CCAGTCCTTCTTCAGCTTTCCTGAACCCAAGTCCGGGGACAGGAATGCCTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | AACCTAGGGAAGTCTGGGAAAACAGTCCCTTCAGGCATTCCTGTCCCCGGACTTGCCTTCTGCAAAGTGTaGCGGGGCAGCTGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLGKSGKTVPSGIPVPGLAFCKV*RGSWLH Trigger: ATGCAGCCAGCTGCCCCGCCACACTTTGCAGAAGGC...AAGTCCGGGGACAGGAATGCCTGAAGGGACTGTTTTCCCAGACTTCCCTAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | GGGGGCCCCAGCACCAAGGATCACATCCAAGATGGGTGGAGAGGAAGGGACATGCATTCAGCTCATCCTTaGCCTTCTGCAAAGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGPSTKDHIQDGWRGRDMHSAHP*PSAKCG Trigger: GCCACACTTTGCAGAAGGCCAAGGATGAGCTGAATG...CATGTCCCTTCCTCTCCACCCATCTTGGATGTGATCCTTGGTGCTGGGGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | GGGGGCCCCAGCACCAAGGATCACATCCAAGATGGGTGGAGAGGAAGGGACATGGCTGGGAATGAATCCTaGAGCATGTCCACCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGPSTKDHIQDGWRGRDMAGNES*SMSTIF Trigger: GAAGATGGTGGACATGCTCCAGGATTCATTCCCAGC...CATGTCCCTTCCTCTCCACCCATCTTGGATGTGATCCTTGGTGCTGGGGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | GTTGCTGGCCCCTCCCTGGAATCCTGGGTGGGAAACCCCTTATCTGCCTACTGCGGCTGGTGGATGAAGTaGATAGCTTTGAACCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VAGPSLESWVGNPLSAYCGWWMK*IALNLA Trigger: AGCCAGGTTCAAAGCTATCCACTTCATCCACCAGCC...GCAGTAGGCAGATAAGGGGTTTCCCACCCAGGATTCCAGGGAGGGGCCAGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR TCA 90 bp | AACTGTGCTAAGGTTGCTGGCCCCTCCCTGGAATCCTGGGTGGGAAACCCCTTACCAAAGACAGGACCATaGTCCTTGGTTGTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NCAKVAGPSLESWVGNPLPKTGP*SLVVSC Trigger: GCAGCTCACAACCAAGGATCATGGTCCTGTCTTTGG...TAAGGGGTTTCCCACCCAGGATTCCAGGGAGGGGCCAGCAACCTTAGCACAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | AGTCTGGGAAAACAGTCCCTTCAGGCATTCCTGTCCCCGGACTTGGGTTCAGGATCCTTGGTTGTGAGCTaGTCCAGTTGTGCTCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGKQSLQAFLSPDLGSGSLVVS*SSCARS Trigger: GCTCCGAGCACAACTGGAGCAGCTCACAACCAAGGA...TCCTGAACCCAAGTCCGGGGACAGGAATGCCTGAAGGGACTGTTTTCCCAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | AACCTAGGGAAGTCTGGGAAAACAGTCCCTTCAGGCATTCCTGTCCCCGGACTTTCATCCTTGGCCTTCTaGAAAGTGTGGCGGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLGKSGKTVPSGIPVPGLSSLAF*KVWRGS Trigger: GCTGCCCCGCCACACTTTGCAGAAGGCCAAGGATGA...AAGTCCGGGGACAGGAATGCCTGAAGGGACTGTTTTCCCAGACTTCCCTAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | GCGTTCCTAAACCTAGGGAAGTCTGGGAAAACAGTCCCTTCAGGCATTCCTGTCGAAGGCGCTGTCTCTTaGCTGCACCCTCTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AFLNLGKSGKTVPSGIPVEGAVS*LHPLSH Trigger: GTGGCTGAGAGGGTGCAGGCAAGAGACAGCGCCTTC...GACAGGAATGCCTGAAGGGACTGTTTTCCCAGACTTCCCTAGGTTTAGGAACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | TGCCTTCCACGCCCTAAGTATCAAAGCGATTACAAAGGAAATCACGGAGAAGCCCGAGGGGCGGAGCCCTaGTGCCTGCTGCATGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLPRPKYQSDYKGNHGEARGAEP*CLLHGE Trigger: TTCACCATGCAGCAGGCAGCAGGGCTCCGCCCCTCG...GGCTTCTCCGTGATTTCCTTTGTAATCGCTTTGATACTTAGGGCGTGGAAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | AGATGGGTGGAGAGGAAGGGACATGACCTCCACCCTGGACAGAGTCCAGAGCTCGCTGGGAATGAATCCTaGAGCATGTCCACCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RWVERKGHDLHPGQSPELAGNES*SMSTIF Trigger: GAAGATGGTGGACATGCTCCAGGATTCATTCCCAGC...GAGCTCTGGACTCTGTCCAGGGTGGAGGTCATGTCCCTTCCTCTCCACCCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | CTCCCGATGAAAGGCATTCCCCTGCCTCACTGCCCTCTAGGTCGGTTTGGGATGGGCTGGTGGATGAAGTaGATAGCTTTGAACCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPMKGIPLPHCPLGRFGMGWWMK*IALNLA Trigger: AGCCAGGTTCAAAGCTATCCACTTCATCCACCAGCC...CATCCCAAACCGACCTAGAGGGCAGTGAGGCAGGGGAATGCCTTTCATCGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAGGCATTCCTGTCCCCGGACTTGGGTTCAGGAAAGCTGAAGAAGGACTGGCCAAAGACAGGACCATaGTCCTTGGTTGTGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQAFLSPDLGSGKLKKDWPKTGP*SLVVSC Trigger: GCAGCTCACAACCAAGGATCATGGTCCTGTCTTTGG...CCAGTCCTTCTTCAGCTTTCCTGAACCCAAGTCCGGGGACAGGAATGCCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | GCGTTCCTAAACCTAGGGAAGTCTGGGAAAACAGTCCCTTCAGGCATTCCTGTCAGCCCTGCTGCCTGCTaGATGGTGAAGCCCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AFLNLGKSGKTVPSGIPVSPAAC*MVKPLK Trigger: CTTCAAGGGCTTCACCATGCAGCAGGCAGCAGGGCT...GACAGGAATGCCTGAAGGGACTGTTTTCCCAGACTTCCCTAGGTTTAGGAACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | AACCTAGGGAAGTCTGGGAAAACAGTCCCTTCAGGCATTCCTGTCCCCGGACTTCGGGGACCAAAGAGCTaGTCAGCAACAACTTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NLGKSGKTVPSGIPVPGLRGPKS*SATTLP Trigger: CGGCAAAGTTGTTGCTGAGCAGCTCTTTGGTCCCCG...AAGTCCGGGGACAGGAATGCCTGAAGGGACTGTTTTCCCAGACTTCCCTAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | TTTAACTGCCCCACATATCTCCCGATGAAAGGCATTCCCCTGCCTCACTGCCCTCGGGGACCAAAGAGCTaGTCAGCAACAACTTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FNCPTYLPMKGIPLPHCPRGPKS*SATTLP Trigger: CGGCAAAGTTGTTGCTGAGCAGCTCTTTGGTCCCCG...AGGGCAGTGAGGCAGGGGAATGCCTTTCATCGGGAGATATGTGGGGCAGTTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | CCCCTTATCTGCCTACTGCTGTTAAGATCATCAGAGCTTCAAGCCCCTCTCTTTGTGTGGCGGGGCAGCTaGCTGCATGGGCCAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PLICLLLLRSSELQAPLFVWRGS*LHGPKT Trigger: TGTCTTTGGCCCATGCAGCCAGCTGCCCCGCCACAC...AAAGAGAGGGGCTTGAAGCTCTGATGATCTTAACAGCAGTAGGCAGATAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | AACTGTGCTAAGGTTGCTGGCCCCTCCCTGGAATCCTGGGTGGGAAACCCCTTACATACTTGTCCCGACTaGAAAGGACACCAGGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: NCAKVAGPSLESWVGNPLHTCPD*KGHQGI Trigger: GATACCCTGGTGTCCTTTCCAGTCGGGACAAGTATG...TAAGGGGTTTCCCACCCAGGATTCCAGGGAGGGGCCAGCAACCTTAGCACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | GGGGGCCCCAGCACCAAGGATCACATCCAAGATGGGTGGAGAGGAAGGGACATGCAGAAGCCGTTGATTTaGGTTTCCTCATTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGPSTKDHIQDGWRGRDMQKPLI*VSSFSS Trigger: GCTGGAAAATGAGGAAACCCAAATCAACGGCTTCTG...CATGTCCCTTCCTCTCCACCCATCTTGGATGTGATCCTTGGTGCTGGGGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | GGGGGCCCCAGCACCAAGGATCACATCCAAGATGGGTGGAGAGGAAGGGACATGAAGTACCATGGCTGGTaGATGAAGTGGATAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGPSTKDHIQDGWRGRDMKYHGW*MKWIAL Trigger: CAAAGCTATCCACTTCATCCACCAGCCATGGTACTT...CATGTCCCTTCCTCTCCACCCATCTTGGATGTGATCCTTGGTGCTGGGGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| 3UTR CAA 72 bp | GGAAAACAGTCCCTTCAGGCATTCCTGTCCCCGGACTaGGGTTCAGGAAAGCTGAAGAAGGACTGGGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKQSLQAFLSPD*GSGKLKKDWDA Trigger: AGCATCCCAGTCCTTCTTCAGCTTTCCTGAACCCAAGTCCGGGGACAGGAATGCCTGAAGGGACTGTTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | TGCCTTCCACGCCCTAAGTATCAAAGCGATTACAAAGGAAATCACGGAGAAGCCGCCTTCTGCAAAGTGTaGCGGGGCAGCTGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLPRPKYQSDYKGNHGEAAFCKV*RGSWLH Trigger: ATGCAGCCAGCTGCCCCGCCACACTTTGCAGAAGGC...GGCTTCTCCGTGATTTCCTTTGTAATCGCTTTGATACTTAGGGCGTGGAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | GAGTATTCATCAGCAACTGTGCTAAGGTTGCTGGCCCCTCCCTGGAATCCTGGGGGTGGTGAAGTACCATaGCTGGTGGATGAAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EYSSATVLRLLAPPWNPGGGEVP*LVDEVD Trigger: ATCCACTTCATCCACCAGCCATGGTACTTCACCACC...CCCAGGATTCCAGGGAGGGGCCAGCAACCTTAGCACAGTTGCTGATGAATACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | AGTCTGGGAAAACAGTCCCTTCAGGCATTCCTGTCCCCGGACTTGGGTTCAGGAGGTGGTGAAGTACCATaGCTGGTGGATGAAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLGKQSLQAFLSPDLGSGGGEVP*LVDEVD Trigger: ATCCACTTCATCCACCAGCCATGGTACTTCACCACC...TCCTGAACCCAAGTCCGGGGACAGGAATGCCTGAAGGGACTGTTTTCCCAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR TCA 90 bp | ACCAAGGATCACATCCAAGATGGGTGGAGAGGAAGGGACATGACCTCCACCCTGTCTTCAAGAAGGGCTTaGCCACATTATAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKDHIQDGWRGRDMTSTLSSRRA*PHYRWW Trigger: CCACCACCTATAATGTGGTCAAGCCCTTCTTGAAGA...CAGGGTGGAGGTCATGTCCCTTCCTCTCCACCCATCTTGGATGTGATCCTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR GCA 90 bp | CCTGGACAGAGTCCAGAGCTCTTAGCTACTAGAGTATTCATCAGCAACTGTGCTAGCCCTGCTGCCTGCTaGATGGTGAAGCCCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGQSPELLATRVFISNCASPAAC*MVKPLK Trigger: CTTCAAGGGCTTCACCATGCAGCAGGCAGCAGGGCT...AGCACAGTTGCTGATGAATACTCTAGTAGCTAAGAGCTCTGGACTCTGTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR TCA 90 bp | GTCTTTGAAATCCAACTTCTCTCAGAGTCACTGCCCTGTAACTGCAGAGGCAGGCATGATCCTTGGTTGTaGGCTGCTCCAGTTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFEIQLLSESLPCNCRGRHDPWL*AAPVVL Trigger: GAGCACAACTGGAGCAGCTCACAACCAAGGATCATG...CCTGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAGAAGTTGGATTTCAAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR TCA 90 bp | TTTAACTGCCCCACATATCTCCCGATGAAAGGCATTCCCCTGCCTCACTGCCCTTCTTCAAGAAGGGCTTaGCCACATTATAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FNCPTYLPMKGIPLPHCPSSRRA*PHYRWW Trigger: CCACCACCTATAATGTGGTCAAGCCCTTCTTGAAGA...AGGGCAGTGAGGCAGGGGAATGCCTTTCATCGGGAGATATGTGGGGCAGTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR TCA 90 bp | AACTGTGCTAAGGTTGCTGGCCCCTCCCTGGAATCCTGGGTGGGAAACCCCTTAGCAGTTTCTCCAAAATaGAACAATATGCCTGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NCAKVAGPSLESWVGNPLAVSPK*NNMPVR Trigger: TCTTACAGGCATATTGTTTCATTTTGGAGAAACTGC...TAAGGGGTTTCCCACCCAGGATTCCAGGGAGGGGCCAGCAACCTTAGCACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTCAGAGTCACTGCCCTGTAACTGCAGAGGCAGGTGGGAATTTAACTGCAAGTACCATGGCTGGTaGATGAAGTGGATAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSESLPCNCRGRWEFNCKYHGW*MKWIAL Trigger: CAAAGCTATCCACTTCATCCACCAGCCATGGTACTT...GCAGTTAAATTCCCACCTGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTCAGAGTCACTGCCCTGTAACTGCAGAGGCAGGTGGGAATTTAACTGCTTCTCATCAATCTCCTaGAAGAAGCCATCCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSESLPCNCRGRWEFNCFSSIS*KKPSRS Trigger: TGACCTGGATGGCTTCTTCCAGGAGATTGATGAGAA...GCAGTTAAATTCCCACCTGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | GGACAGAGTCCAGAGCTCTTAGCTACTAGAGTATTCATCAGCAACTGTGCTAAGCATACTTGTCCCGACTaGAAAGGACACCAGGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: GQSPELLATRVFISNCAKHTCPD*KGHQGI Trigger: GATACCCTGGTGTCCTTTCCAGTCGGGACAAGTATG...CTTAGCACAGTTGCTGATGAATACTCTAGTAGCTAAGAGCTCTGGACTCTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | CCCCTTATCTGCCTACTGCTGTTAAGATCATCAGAGCTTCAAGCCCCTCTCTTTCAGAAGCCGTTGATTTaGGTTTCCTCATTTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLICLLLLRSSELQAPLFQKPLI*VSSFSS Trigger: GCTGGAAAATGAGGAAACCCAAATCAACGGCTTCTG...AAAGAGAGGGGCTTGAAGCTCTGATGATCTTAACAGCAGTAGGCAGATAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR TCA 90 bp | GTCTTTGAAATCCAACTTCTCTCAGAGTCACTGCCCTGTAACTGCAGAGGCAGGCAATACAGAAGCCGTTaGTTTGGGTTTCCTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFEIQLLSESLPCNCRGRQYRSR*FGFPHF Trigger: AAAATGAGGAAACCCAAATCAACGGCTTCTGTATTG...CCTGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAGAAGTTGGATTTCAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CCA 90 bp | GGACAGAGTCCAGAGCTCTTAGCTACTAGAGTATTCATCAGCAACTGTGCTAAGTTCTCATCAATCTCCTaGAAGAAGCCATCCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQSPELLATRVFISNCAKFSSIS*KKPSRS Trigger: TGACCTGGATGGCTTCTTCCAGGAGATTGATGAGAA...CTTAGCACAGTTGCTGATGAATACTCTAGTAGCTAAGAGCTCTGGACTCTGTCC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR TCA 90 bp | CCCCTTATCTGCCTACTGCTGTTAAGATCATCAGAGCTTCAAGCCCCTCTCTTTCAATACAGAAGCCGTTaGTTTGGGTTTCCTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLICLLLLRSSELQAPLFQYRSR*FGFPHF Trigger: AAAATGAGGAAACCCAAATCAACGGCTTCTGTATTG...AAAGAGAGGGGCTTGAAGCTCTGATGATCTTAACAGCAGTAGGCAGATAAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS GCA 90 bp | GCGCAGGAGGAAGGCGCTGTCTCTTGCCTGCACCCTCTCAGCCACTaGCAGGGCCAATTCCTCGCCAGAAGCTGCCTGTGCCTGTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: AQEEGAVSCLHPLSH*QGQFLARSCLCLYQ Trigger: CTGGTACAGGCACAGGCAGCTTCTGGCGAGGAATTGGCCCTGGCAGTGGCTGAGAGGGTGCAGGCAAGAGACAGCGCCTTCCTCCTGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000205442.2 ENSMUST00000206162.2 ENSMUST00000206320.3 |
||
| CDS GCA 90 bp | TTGCGGGCACGGATGAAGCGCAGGAGGAAGGCGCTGTCTCTTGCCTaGACCCTCTCAGCCACTGCCAGGGCCAATTCCTCGCCAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRARMKRRRKALSLA*TLSATARANSSPEA Trigger: AGCTTCTGGCGAGGAATTGGCCCTGGCAGTGGCTGAGAGGGTGCAGGCAAGAGACAGCGCCTTCCTCCTGCGCTTCATCCGTGCCCGCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000205442.2 ENSMUST00000206162.2 ENSMUST00000206320.3 |
||
| CDS-3UTR CAA 90 bp | CTCCCGATGAAAGGCATTCCCCTGCCTCACTGCCCTCTAGGTCGGTTTGGGATGGGAAGGCGCTGTCTCTaGCCTGCACCCTCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPMKGIPLPHCPLGRFGMGRRCL*PAPSQP Trigger: TGGCTGAGAGGGTGCAGGCAAGAGACAGCGCCTTCC...CATCCCAAACCGACCTAGAGGGCAGTGAGGCAGGGGAATGCCTTTCATCGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCATTCCCCTGCCTCACTGCCCTCTAGGTCGGTTTGGGATGAGGTGCCATGTGAGCTGCTCCAGTaGTGCTCGGAGCTCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ERHSPASLPSRSVWDEVPCELLQ*CSELLL Trigger: GAGCAGGAGCTCCGAGCACAACTGGAGCAGCTCACA...TGGCACCTCATCCCAAACCGACCTAGAGGGCAGTGAGGCAGGGGAATGCCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | GGGGGCCCCAGCACCAAGGATCACATCCAAGATGGGTGGAGAGGAAGGGACATGATGTCCACCATCTTCTaGAGATCCGAGGGGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGPSTKDHIQDGWRGRDMMSTIF*RSEGRS Trigger: GCTCCGCCCCTCGGATCTCAAGAAGATGGTGGACAT...CATGTCCCTTCCTCTCCACCCATCTTGGATGTGATCCTTGGTGCTGGGGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS TCA 90 bp | GCAGCTGGCTGCATGGGCCAAAGACAGGACCATGATCCTTGGTTGTaGGCTGCTCCAGTTGTGCTCGGAGCTCCTGCTCCTCTTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AAGCMGQRQDHDPWL*AAPVVLGAPAPLQE Trigger: TTCCTGAAGAGGAGCAGGAGCTCCGAGCACAACTGGAGCAGCTCACAACCAAGGATCATGGTCCTGTCTTTGGCCCATGCAGCCAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000205442.2 ENSMUST00000205638.2 ENSMUST00000206162.2 ENSMUST00000206320.3 |
||
| CDS-3UTR CAA 90 bp | ACCAAGGATCACATCCAAGATGGGTGGAGAGGAAGGGACATGACCTCCACCCTGTGTGAGCTGCTCCAGTaGTGCTCGGAGCTCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TKDHIQDGWRGRDMTSTLCELLQ*CSELLL Trigger: GAGCAGGAGCTCCGAGCACAACTGGAGCAGCTCACA...CAGGGTGGAGGTCATGTCCCTTCCTCTCCACCCATCTTGGATGTGATCCTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | CTCCCGATGAAAGGCATTCCCCTGCCTCACTGCCCTCTAGGTCGGTTTGGGATGTGCTCAGCAACAACTTaGCCGTCGTACTTGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPMKGIPLPHCPLGRFGMCSATT*PSYLGS Trigger: ACTGCCCAAGTACGACGGCAAAGTTGTTGCTGAGCA...CATCCCAAACCGACCTAGAGGGCAGTGAGGCAGGGGAATGCCTTTCATCGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS GCA 90 bp | TCCACCATCTTCTTGAGATCCGAGGGGCGGAGCCCTGCTGCCTGCTaGATGGTGAAGCCCTTGAAGTTCTCAACAATACAGAAGCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: STIFLRSEGRSPAAC*MVKPLKFSTIQKPL Trigger: CAACGGCTTCTGTATTGTTGAGAACTTCAAGGGCTTCACCATGCAGCAGGCAGCAGGGCTCCGCCCCTCGGATCTCAAGAAGATGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS GCA 90 bp | ATGTCCACCATCTTCTTGAGATCCGAGGGGCGGAGCCCTGCTGCCTaGTGCATGGTGAAGCCCTTGAAGTTCTCAACAATACAGAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: MSTIFLRSEGRSPAA*CMVKPLKFSTIQKP Trigger: CGGCTTCTGTATTGTTGAGAACTTCAAGGGCTTCACCATGCAGCAGGCAGCAGGGCTCCGCCCCTCGGATCTCAAGAAGATGGTGGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS GCA 90 bp | CTGGAGCATGTCCACCATCTTCTTGAGATCCGAGGGGCGGAGCCCTaGTGCCTGCTGCATGGTGAAGCCCTTGAAGTTCTCAACAATACA | + |
|
Preference number: 5 (lower is better) Translates to: LEHVHHLLEIRGAEP*CLLHGEALEVLNNT Trigger: TGTATTGTTGAGAACTTCAAGGGCTTCACCATGCAGCAGGCAGCAGGGCTCCGCCCCTCGGATCTCAAGAAGATGGTGGACATGCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS CCA 90 bp | CCCGGGGACCAAAGAGCTGCTCAGCAACAACTTTGCCGTCGTACTTaGGCAGTGTACCCCCAAAGTCAGCAGGCAGGATGTTCTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: PGDQRAAQQQLCRRT*AVYPQSQQAGCSHQ Trigger: TTGATGAGAACATCCTGCCTGCTGACTTTGGGGGTACACTGCCCAAGTACGACGGCAAAGTTGTTGCTGAGCAGCTCTTTGGTCCCCGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS TCA 90 bp | TATCGAAGAGTTCAGGGTACTGGAGGCGGAAGTTCACATAGCCTTTaGGCAGCTCATAAGCACGACCCACATCGAACTTGCGGGCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: YRRVQGTGGGSSHSL*AAHKHDPHRTCGHG Trigger: TCCGTGCCCGCAAGTTCGATGTGGGTCGTGCTTATGAGCTGCTCAAAGGCTATGTGAACTTCCGCCTCCAGTACCCTGAACTCTTCGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 ENSMUST00000206320.3 |
||
| CDS-3UTR CAA 90 bp | GTCTTTGAAATCCAACTTCTCTCAGAGTCACTGCCCTGTAACTGCAGAGGCAGGATGTCCACCATCTTCTaGAGATCCGAGGGGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VFEIQLLSESLPCNCRGRMSTIF*RSEGRS Trigger: GCTCCGCCCCTCGGATCTCAAGAAGATGGTGGACAT...CCTGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAGAAGTTGGATTTCAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | TTTAACTGCCCCACATATCTCCCGATGAAAGGCATTCCCCTGCCTCACTGCCCTTGCTCAGCAACAACTTaGCCGTCGTACTTGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FNCPTYLPMKGIPLPHCPCSATT*PSYLGS Trigger: ACTGCCCAAGTACGACGGCAAAGTTGTTGCTGAGCA...AGGGCAGTGAGGCAGGGGAATGCCTTTCATCGGGAGATATGTGGGGCAGTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | AACTGTGCTAAGGTTGCTGGCCCCTCCCTGGAATCCTGGGTGGGAAACCCCTTATGCCAGTTTTCGATGTaGAAGAGCATAACCACTCGA | + |
|
Preference number: 5 (lower is better) Translates to: NCAKVAGPSLESWVGNPLCQFSM*KSITTR Trigger: TCGAGTGGTTATGCTCTTCAACATCGAAAACTGGCA...TAAGGGGTTTCCCACCCAGGATTCCAGGGAGGGGCCAGCAACCTTAGCACAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | AACTGTGCTAAGGTTGCTGGCCCCTCCCTGGAATCCTGGGTGGGAAACCCCTTAATGAAGTGGATAGCTTaGAACCTGGCTGGGAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: NCAKVAGPSLESWVGNPLMKWIA*NLAGNE Trigger: TTCATTCCCAGCCAGGTTCAAAGCTATCCACTTCAT...TAAGGGGTTTCCCACCCAGGATTCCAGGGAGGGGCCAGCAACCTTAGCACAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | CTTCAGGCATTCCTGTCCCCGGACTTGGGTTCAGGAAAGCTGAAGAAGGACTGGATGAAGTGGATAGCTTaGAACCTGGCTGGGAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LQAFLSPDLGSGKLKKDWMKWIA*NLAGNE Trigger: TTCATTCCCAGCCAGGTTCAAAGCTATCCACTTCAT...CCAGTCCTTCTTCAGCTTTCCTGAACCCAAGTCCGGGGACAGGAATGCCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | TTTAACTGCCCCACATATCTCCCGATGAAAGGCATTCCCCTGCCTCACTGCCCTACAGAAGCCGTTGATTaGGGTTTCCTCATTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FNCPTYLPMKGIPLPHCPTEAVD*GFLIFQ Trigger: CTGGAAAATGAGGAAACCCAAATCAACGGCTTCTGT...AGGGCAGTGAGGCAGGGGAATGCCTTTCATCGGGAGATATGTGGGGCAGTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | TTTAACTGCCCCACATATCTCCCGATGAAAGGCATTCCCCTGCCTCACTGCCCTTGCATGGTGAAGCCCTaGAAGTTCTCAACAATACAG | + |
|
Preference number: 5 (lower is better) Translates to: FNCPTYLPMKGIPLPHCPCMVKP*KFSTIQ Trigger: CTGTATTGTTGAGAACTTCAAGGGCTTCACCATGCA...AGGGCAGTGAGGCAGGGGAATGCCTTTCATCGGGAGATATGTGGGGCAGTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | CCCCTTATCTGCCTACTGCTGTTAAGATCATCAGAGCTTCAAGCCCCTCTCTTTTCATTCAGCTCATCCTaGGCCTTCTGCAAAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLICLLLLRSSELQAPLFSFSSS*AFCKVW Trigger: CCACACTTTGCAGAAGGCCAAGGATGAGCTGAATGA...AAAGAGAGGGGCTTGAAGCTCTGATGATCTTAACAGCAGTAGGCAGATAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | GAGTATTCATCAGCAACTGTGCTAAGGTTGCTGGCCCCTCCCTGGAATCCTGGGACAATACAGAAGCCGTaGATTTGGGTTTCCTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: EYSSATVLRLLAPPWNPGTIQKP*IWVSSF Trigger: AAATGAGGAAACCCAAATCAACGGCTTCTGTATTGT...CCCAGGATTCCAGGGAGGGGCCAGCAACCTTAGCACAGTTGCTGATGAATACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | GTCTTTGAAATCCAACTTCTCTCAGAGTCACTGCCCTGTAACTGCAGAGGCAGGACAGAAGCCGTTGATTaGGGTTTCCTCATTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VFEIQLLSESLPCNCRGRTEAVD*GFLIFQ Trigger: CTGGAAAATGAGGAAACCCAAATCAACGGCTTCTGT...CCTGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAGAAGTTGGATTTCAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | GTCTTTGAAATCCAACTTCTCTCAGAGTCACTGCCCTGTAACTGCAGAGGCAGGTGCATGGTGAAGCCCTaGAAGTTCTCAACAATACAG | + |
|
Preference number: 5 (lower is better) Translates to: VFEIQLLSESLPCNCRGRCMVKP*KFSTIQ Trigger: CTGTATTGTTGAGAACTTCAAGGGCTTCACCATGCA...CCTGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAGAAGTTGGATTTCAAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS-3UTR CAA 90 bp | GTCTTTGAAATCCAACTTCTCTCAGAGTCACTGCCCTGTAACTGCAGAGGCAGGACAATACAGAAGCCGTaGATTTGGGTTTCCTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: VFEIQLLSESLPCNCRGRTIQKP*IWVSSF Trigger: AAATGAGGAAACCCAAATCAACGGCTTCTGTATTGT...CCTGCCTCTGCAGTTACAGGGCAGTGACTCTGAGAGAAGTTGGATTTCAAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS GCA 90 bp | AAACAATATGCCTGTAAGATCTCATCAAAGGTCACTTCTTCACAGTaGCAGTTTTCGATGTTGAAGAGCATAACCACTCGACCATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KQYACKISSKVTSSQ*QFSMLKSITTRPYL Trigger: CAAGTATGGTCGAGTGGTTATGCTCTTCAACATCGAAAACTGGCACTGTGAAGAAGTGACCTTTGATGAGATCTTACAGGCATATTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS CAA 72 bp | GCTGGGAATGAATCCTGGAGCATGTCCACCATCTTCTaGAGATCCGAGGGGCGGAGCCCTGCTGCCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AGNESWSMSTIF*RSEGRSPAACC Trigger: GCAGCAGGCAGCAGGGCTCCGCCCCTCGGATCTCAAGAAGATGGTGGACATGCTCCAGGATTCATTCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS TCA 72 bp | CATAAGCACGACCCACATCGAACTTGCGGGCACGGATaGAGCGCAGGAGGAAGGCGCTGTCTCTTGCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: HKHDPHRTCGHG*SAGGRRCLLPA Trigger: TGCAGGCAAGAGACAGCGCCTTCCTCCTGCGCTTCATCCGTGCCCGCAAGTTCGATGTGGGTCGTGCTTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000205442.2 ENSMUST00000206162.2 ENSMUST00000206320.3 |
||
| CDS TCA 72 bp | CTGGGAATGAATCCTGGAGCATGTCCACCATCTTCTTaGGATCCGAGGGGCGGAGCCCTGCTGCCTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGMNPGACPPSS*DPRGGALLPAA Trigger: TGCAGCAGGCAGCAGGGCTCCGCCCCTCGGATCTCAAGAAGATGGTGGACATGCTCCAGGATTCATTCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS GCA 72 bp | CCTTGGCCTTCTGCAAAGTGTGGCGGGGCAGCTGGCTaGATGGGCCAAAGACAGGACCATGATCCTTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PWPSAKCGGAAG*MGQRQDHDPWL Trigger: CAACCAAGGATCATGGTCCTGTCTTTGGCCCATGCAGCCAGCTGCCCCGCCACACTTTGCAGAAGGCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000205442.2 ENSMUST00000205638.2 ENSMUST00000206162.2 ENSMUST00000206320.3 |
||
| CDS GCA 72 bp | GTCCACCATCTTCTTGAGATCCGAGGGGCGGAGCCCTaGTGCCTGCTGCATGGTGAAGCCCTTGAAGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VHHLLEIRGAEP*CLLHGEALEVL Trigger: GAGAACTTCAAGGGCTTCACCATGCAGCAGGCAGCAGGGCTCCGCCCCTCGGATCTCAAGAAGATGGTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS CAA 90 bp | TTGAACCTGGCTGGGAATGAATCCTGGAGCATGTCCACCATCTTCTaGAGATCCGAGGGGCGGAGCCCTGCTGCCTGCTGCATGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LNLAGNESWSMSTIF*RSEGRSPAACCMVK Trigger: CTTCACCATGCAGCAGGCAGCAGGGCTCCGCCCCTCGGATCTCAAGAAGATGGTGGACATGCTCCAGGATTCATTCCCAGCCAGGTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS GCA 72 bp | CAGCCCGGGGACCAAAGAGCTGCTCAGCAACAACTTTaGCGTCGTACTTGGGCAGTGTACCCCCAAAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QPGDQRAAQQQL*RRTWAVYPQSQ Trigger: CTGACTTTGGGGGTACACTGCCCAAGTACGACGGCAAAGTTGTTGCTGAGCAGCTCTTTGGTCCCCGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS CAA 90 bp | GCCCGGGGACCAAAGAGCTGCTCAGCAACAACTTTGCCGTCGTACTaGGGCAGTGTACCCCCAAAGTCAGCAGGCAGGATGTTCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: ARGPKSCSATTLPSY*GSVPPKSAGRMFSS Trigger: TGATGAGAACATCCTGCCTGCTGACTTTGGGGGTACACTGCCCAAGTACGACGGCAAAGTTGTTGCTGAGCAGCTCTTTGGTCCCCGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS TCA 72 bp | TGCATGGGCCAAAGACAGGACCATGATCCTTGGTTGTaGGCTGCTCCAGTTGTGCTCGGAGCTCCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CMGQRQDHDPWL*AAPVVLGAPAP Trigger: AGGAGCAGGAGCTCCGAGCACAACTGGAGCAGCTCACAACCAAGGATCATGGTCCTGTCTTTGGCCCATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000205442.2 ENSMUST00000205638.2 ENSMUST00000206162.2 ENSMUST00000206320.3 |
||
| CDS CAA 72 bp | TCAGCCCGGGGACCAAAGAGCTGCTCAGCAACAACTTaGCCGTCGTACTTGGGCAGTGTACCCCCAAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SARGPKSCSATT*PSYLGSVPPKS Trigger: TGACTTTGGGGGTACACTGCCCAAGTACGACGGCAAAGTTGTTGCTGAGCAGCTCTTTGGTCCCCGGGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS GCA 72 bp | TTCTTGAGATCCGAGGGGCGGAGCCCTGCTGCCTGCTaGATGGTGAAGCCCTTGAAGTTCTCAACAATACAG | + |
|
Preference number: 6 (lower is better) Translates to: FLRSEGRSPAAC*MVKPLKFSTIQ Trigger: CTGTATTGTTGAGAACTTCAAGGGCTTCACCATGCAGCAGGCAGCAGGGCTCCGCCCCTCGGATCTCAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS GCA 72 bp | GCTGTGTTCTCAACTTCAGCCCGGGGACCAAAGAGCTaGTCAGCAACAACTTTGCCGTCGTACTTGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AVFSTSARGPKS*SATTLPSYLGS Trigger: ACTGCCCAAGTACGACGGCAAAGTTGTTGCTGAGCAGCTCTTTGGTCCCCGGGCTGAAGTTGAGAACACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS CAA 72 bp | GGGCGGAGCCCTGCTGCCTGCTGCATGGTGAAGCCCTaGAAGTTCTCAACAATACAGAAGCCGTTGATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRSPAACCMVKP*KFSTIQKPLIW Trigger: CCAAATCAACGGCTTCTGTATTGTTGAGAACTTCAAGGGCTTCACCATGCAGCAGGCAGCAGGGCTCCGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS CAA 72 bp | CCAAAGAGCTGCTCAGCAACAACTTTGCCGTCGTACTaGGGCAGTGTACCCCCAAAGTCAGCAGGCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: PKSCSATTLPSY*GSVPPKSAGRM Trigger: CATCCTGCCTGCTGACTTTGGGGGTACACTGCCCAAGTACGACGGCAAAGTTGTTGCTGAGCAGCTCTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 |
||
| CDS CAA 90 bp | AGATCCGAGGGGCGGAGCCCTGCTGCCTGCTGCATGGTGAAGCCCTaGAAGTTCTCAACAATACAGAAGCCGTTGATTTGGGTTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSEGRSPAACCMVKP*KFSTIQKPLIWVSS Trigger: TGAGGAAACCCAAATCAACGGCTTCTGTATTGTTGAGAACTTCAAGGGCTTCACCATGCAGCAGGCAGCAGGGCTCCGCCCCTCGGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS TCA 72 bp | GTTCAGGGTACTGGAGGCGGAAGTTCACATAGCCTTTaGGCAGCTCATAAGCACGACCCACATCGAACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VQGTGGGSSHSL*AAHKHDPHRTC Trigger: GCAAGTTCGATGTGGGTCGTGCTTATGAGCTGCTCAAAGGCTATGTGAACTTCCGCCTCCAGTACCCTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 ENSMUST00000206320.3 |
||
| CDS CAA 90 bp | CAGTGCCAGTTTTCGATGTTGAAGAGCATAACCACTCGACCATACTaGTCCCGACTGGAAAGGACACCAGGGTATCCGGCCTCGATAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QCQFSMLKSITTRPY*SRLERTPGYPASIV Trigger: CACTATCGAGGCCGGATACCCTGGTGTCCTTTCCAGTCGGGACAAGTATGGTCGAGTGGTTATGCTCTTCAACATCGAAAACTGGCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 ENSMUST00000206320.3 |
||
| CDS CCA 72 bp | AAGTGGATAGCTTTGAACCTGGCTGGGAATGAATCCTaGAGCATGTCCACCATCTTCTTGAGATCCGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KWIALNLAGNES*SMSTIFLRSEG Trigger: CCCCTCGGATCTCAAGAAGATGGTGGACATGCTCCAGGATTCATTCCCAGCCAGGTTCAAAGCTATCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS CAA 72 bp | TTTTCGATGTTGAAGAGCATAACCACTCGACCATACTaGTCCCGACTGGAAAGGACACCAGGGTATCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FSMLKSITTRPY*SRLERTPGYPA Trigger: GGCCGGATACCCTGGTGTCCTTTCCAGTCGGGACAAGTATGGTCGAGTGGTTATGCTCTTCAACATCGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 ENSMUST00000206320.3 |
||
| CDS CAA 72 bp | GTGAAGTACCATGGCTGGTGGATGAAGTGGATAGCTTaGAACCTGGCTGGGAATGAATCCTGGAGCATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VKYHGWWMKWIA*NLAGNESWSMS Trigger: GGACATGCTCCAGGATTCATTCCCAGCCAGGTTCAAAGCTATCCACTTCATCCACCAGCCATGGTACTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS GCA 72 bp | GCCTGTAAGATCTCATCAAAGGTCACTTCTTCACAGTaGCAGTTTTCGATGTTGAAGAGCATAACCACTCGA | + |
|
Preference number: 6 (lower is better) Translates to: ACKISSKVTSSQ*QFSMLKSITTR Trigger: TCGAGTGGTTATGCTCTTCAACATCGAAAACTGGCACTGTGAAGAAGTGACCTTTGATGAGATCTTACAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS CAA 72 bp | GTGAAGCCCTTGAAGTTCTCAACAATACAGAAGCCGTaGATTTGGGTTTCCTCATTTTCCAGCAGTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VKPLKFSTIQKP*IWVSSFSSSFS Trigger: GGAGAAACTGCTGGAAAATGAGGAAACCCAAATCAACGGCTTCTGTATTGTTGAGAACTTCAAGGGCTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS CCA 72 bp | CCCTTGAAGTTCTCAACAATACAGAAGCCGTTGATTTaGGTTTCCTCATTTTCCAGCAGTTTCTCCAAAATG | + |
|
Preference number: 6 (lower is better) Translates to: PLKFSTIQKPLI*VSSFSSSFSKM Trigger: CATTTTGGAGAAACTGCTGGAAAATGAGGAAACCCAAATCAACGGCTTCTGTATTGTTGAGAACTTCAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||
| CDS CAA 72 bp | GCCCTTGAAGTTCTCAACAATACAGAAGCCGTTGATTaGGGTTTCCTCATTTTCCAGCAGTTTCTCCAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: ALEVLNNTEAVD*GFLIFQQFLQN Trigger: ATTTTGGAGAAACTGCTGGAAAATGAGGAAACCCAAATCAACGGCTTCTGTATTGTTGAGAACTTCAAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053718.15 ENSMUST00000179243.3 ENSMUST00000206162.2 |
||