Pregenerated sensors for RIT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028057Ensembl transcript IDs: ENSMUST00000029692.15, ENSMUST00000170377.8, ENSMUST00000171645.8, ENSMUST00000172252.2, ENSMUST00000172333.8
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGCACTGGGGAGCACTGCAGTTCACAGCAGGCACAAGGAGCACTaGAGTTCACAGGAGCACAGCCCACTTCACTCAGGTGACCGAGTC | + |
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Preference number: 1 (lower is better) Translates to: TALGSTAVHSRHKEH*SSQEHSPLHSGDRV Trigger: GACTCGGTCACCTGAGTGAAGTGGGCTGTGCTCCTGTGAACTGCAGTGCTCCTTGTGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| 3UTR GCA 90 bp | ATAGCAGAGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTaGACTGGGGAGCACTGCAGTTCACAGCAGGCACAAGGAGCACTG | + |
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Preference number: 1 (lower is better) Translates to: IAESRGRAPCCRLQD*TGEHCSSQQAQGAL Trigger: CAGTGCTCCTTGTGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCTCTGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 ENSMUST00000172333.8 |
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| 3UTR TCA 90 bp | TGGGTCAAATGTGCAGTTCTGGGGCTCACTGTAGGAACACTGGTCTaGCCCTGCATGTTTCCGGCTCTGTCTTCTTGTGTGAGCAATGGC | + |
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Preference number: 1 (lower is better) Translates to: WVKCAVLGLTVGTLV*PCMFPALSSCVSNG Trigger: GCCATTGCTCACACAAGAAGACAGAGCCGGAAACATGCAGGGTCAGACCAGTGTTCCTACAGTGAGCCCCAGAACTGCACATTTGACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR TCA 90 bp | AAATCCCTTCTTACAGGTCTTTCTGGCAGTGGTTTTCTATCGCCTTaGCAATCTTCAGTCGATGTGGCTGTCAGGGCCTTGCTAGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: KSLLTGLSGSGFLSP*QSSVDVAVRALLGL Trigger: CAGGCCTAGCAAGGCCCTGACAGCCACATCGACTGAAGATTGTCAAGGCGATAGAAAACCACTGCCAGAAAGACCTGTAAGAAGGGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR GCA 90 bp | CATGTTCAGAGAGAAATACGCTTCTGTCTCTTTTCACCACCTGAGTaGCTTTGGGTCAAATGTGCAGTTCTGGGGCTCACTGTAGGAACA | + |
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Preference number: 1 (lower is better) Translates to: HVQREIRFCLFSPPE*LWVKCAVLGLTVGT Trigger: TGTTCCTACAGTGAGCCCCAGAACTGCACATTTGACCCAAAGGCACTCAGGTGGTGAAAAGAGACAGAAGCGTATTTCTCTCTGAACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR CCA 90 bp | CATAGCCCAACAAAGGACTTCACTAAGATTCAAGTCATCCAGCAATaGTCCCAGATCCAGAACCAGGCCTCACAGGTAAAGAAAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: HSPTKDFTKIQVIQQ*SQIQNQASQVKKGR Trigger: TCTGCCTTTCTTTACCTGTGAGGCCTGGTTCTGGATCTGGGACCATTGCTGGATGACTTGAATCTTAGTGAAGTCCTTTGTTGGGCTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR TCA 90 bp | TTACTCAGACTCCTGAGTCTCTTCTGTTTGGACAATGACATTGGTTaGATGAAAGGCCTAAAAGCCATCAGGCCTCGCCTGACTCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: LLRLLSLFCLDNDIG*MKGLKAIRPRLTLQ Trigger: CTGAAGAGTCAGGCGAGGCCTGATGGCTTTTAGGCCTTTCATTCAACCAATGTCATTGTCCAAACAGAAGAGACTCAGGAGTCTGAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR CCA 90 bp | CTGCAGTTGCCTCGTATAGAACAAATCCCTTCTTACAGGTCTTTCTaGCAGTGGTTTTCTATCGCCTTGACAATCTTCAGTCGATGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: LQLPRIEQIPSYRSF*QWFSIALTIFSRCG Trigger: GCCACATCGACTGAAGATTGTCAAGGCGATAGAAAACCACTGCCAGAAAGACCTGTAAGAAGGGATTTGTTCTATACGAGGCAACTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR GCA 90 bp | TTGTATTGTGCTGCACGGATTGCCTTCATGTGTGAGTGTGACAGTTaGCAGAAAAGAACTTCTTCCCAGGTGGCACGTGATACTTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: LYCAARIAFMCECDS*QKRTSSQVARDTFL Trigger: TAGAAAAGTATCACGTGCCACCTGGGAAGAAGTTCTTTTCTGGCAACTGTCACACTCACACATGAAGGCAATCCGTGCAGCACAATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGTAGACACGGCCCTGATGAGTTCATGCGTGGGAGTCACGGAGCACAGGGCAGGCACAAGGAGCACTaGAGTTCACAGGAGCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: RSRHGPDEFMRGSHGAQGRHKEH*SSQEHS Trigger: GCTGTGCTCCTGTGAACTGCAGTGCTCCTTGTGCCT...GCCCTGTGCTCCGTGACTCCCACGCATGAACTCATCAGGGCCGTGTCTACTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACAGGCACAAGGAGCACTaGAGTTCACAGGAGCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: ESRGRAPCCRLQDCTGEHRHKEH*SSQEHS Trigger: GCTGTGCTCCTGTGAACTGCAGTGCTCCTTGTGCCT...GTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 ENSMUST00000172333.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACAGCAGGCACGCCCTGATGAGTTCATaGGTGGGAGTCACGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: PAADYRTALGSTAVHSRHALMSS*VGVTEH Trigger: GTGCTCCGTGACTCCCACGCATGAACTCATCAGGGC...GTGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 |
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| 3UTR-3UTR GCA 90 bp | CAGACTTGTTCCCCACAAGAACCACCGGTGTATCATCGGTGCGTCGGACCCGGTCATGGCTGTAAACTCTaGCTGTCCTGCTGTGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: QTCSPQEPPVYHRCVGPGHGCKL*LSCCVQ Trigger: CTGGACACAGCAGGACAGGCAGAGTTTACAGCCATG...ACCGGGTCCGACGCACCGATGATACACCGGTGGTTCTTGTGGGGAACAAGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172333.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAGGAGTAGACACGGCCCTGATGAGTTCATGCGTGGGAGTCACGGAGCACAGTGCACTGGGGAGCACTaGAGTTCACAGCAGGCACAA | + |
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Preference number: 2 (lower is better) Translates to: LRSRHGPDEFMRGSHGAQCTGEH*SSQQAQ Trigger: TTGTGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCA...CTGTGCTCCGTGACTCCCACGCATGAACTCATCAGGGCCGTGTCTACTCCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGAGCACTGCAGTTCACAGGAGCACAGCCCACTTCACTCAGGTGACCGAGAGTCTTTCTTCCTCCTaGACGGTGACTTCAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: TRSTAVHRSTAHFTQVTESLSSS*TVTSAS Trigger: AGAGGCTGAAGTCACCGTTCAGGAGGAAGAAAGACT...CTCGGTCACCTGAGTGAAGTGGGCTGTGCTCCTGTGAACTGCAGTGCTCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| 3UTR-3UTR GCA 90 bp | GGACAACTGAATTCTCGAGCCAGAGACAATCCCTCTTCCTTGGAGACCTGCCTCAGGCACAAGGAGCACTaGAGTTCACAGGAGCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: GQLNSRARDNPSSLETCLRHKEH*SSQEHS Trigger: GCTGTGCTCCTGTGAACTGCAGTGCTCCTTGTGCCT...GAGGCAGGTCTCCAAGGAAGAGGGATTGTCTCTGGCTCGAGAATTCAGTTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGTCCAGGATGTCCAGATTGGCAGGTTCATCATCAATGCGGATCCGGATCAGGCACAAGGAGCACTaGAGTTCACAGGAGCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: AVSRMSRLAGSSSMRIRIRHKEH*SSQEHS Trigger: GCTGTGCTCCTGTGAACTGCAGTGCTCCTTGTGCCT...GATCCGGATCCGCATTGATGATGAACCTGCCAATCTGGACATCCTGGACACAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172333.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGACTTGTTCCCCACAAGAACCACCGGTGTATCATCGGTGCGTCGGACCCTCTTCTGGGAATCGGTaGCTGATGAACTGCATTGTC | + |
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Preference number: 2 (lower is better) Translates to: GQTCSPQEPPVYHRCVGPSSGNR*LMNCIV Trigger: GACAATGCAGTTCATCAGCCACCGATTCCCAGAAGA...GGGTCCGACGCACCGATGATACACCGGTGGTTCTTGTGGGGAACAAGTCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172333.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGACTTGTTCCCCACAAGAACCACCGGTGTATCATCGGTGCGTCGGACCCCCAGGATGTCCAGATTaGCAGGTTCATCATCAATGC | + |
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Preference number: 2 (lower is better) Translates to: GQTCSPQEPPVYHRCVGPPGCPD*QVHHQC Trigger: GCATTGATGATGAACCTGCCAATCTGGACATCCTGG...GGGTCCGACGCACCGATGATACACCGGTGGTTCTTGTGGGGAACAAGTCTGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172333.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCACAAGGAGCACTGCAGTTCACAGGAGCACAGCCCACTTCACTCAGGTGACGATGAATCCTTCTCCTaGCCTCATATACTGATCCCG | + |
|
Preference number: 2 (lower is better) Translates to: RHKEHCSSQEHSPLHSGDDESFS*PHILIP Trigger: CGGGATCAGTATATGAGGGCAGGAGAAGGATTCATC...GTCACCTGAGTGAAGTGGGCTGTGCTCCTGTGAACTGCAGTGCTCCTTGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| 3UTR-3UTR CCA 90 bp | GGACAACTGAATTCTCGAGCCAGAGACAATCCCTCTTCCTTGGAGACCTGCCTCAACTCCCGAACTTCGTaGAAACTTCGACGATCCGTG | + |
|
Preference number: 2 (lower is better) Translates to: GQLNSRARDNPSSLETCLNSRTS*KLRRSV Trigger: CACGGATCGTCGAAGTTTCCACGAAGTTCGGGAGTT...GAGGCAGGTCTCCAAGGAAGAGGGATTGTCTCTGGCTCGAGAATTCAGTTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGTTCCCCACAAGAACCACCGGTGTATCATCGGTGCGTCGGACCCGGTAAATAAGCATCTTCAATGGTaGGGTCATGGTCTTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LVPHKNHRCIIGASDPVNKHLQW*GHGLLG Trigger: TCCCAGAAGACCATGACCCCACCATTGAAGATGCTT...ATTTACCGGGTCCGACGCACCGATGATACACCGGTGGTTCTTGTGGGGAACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172333.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTCATCCAGCAATGGTCCCAGATCCAGAACCAGGCCTCACAGGTAAAGAAACTTCCTCCTGAACGGTaGCTTCAGCCTCTTCCATAC | + |
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Preference number: 2 (lower is better) Translates to: QVIQQWSQIQNQASQVKKLPPER*LQPLPY Trigger: GTATGGAAGAGGCTGAAGTCACCGTTCAGGAGGAAG...TTTCTTTACCTGTGAGGCCTGGTTCTGGATCTGGGACCATTGCTGGATGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR-3UTR GCA 90 bp | AGTAAGTCAATGACAGCTCTCAGTAGGCGAGTCCCCTGGCCAGTGACGTTTAGAGAGACCTGCCTCAGCTaGTTTAGGTCAGACTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: SKSMTALSRRVPWPVTFRETCLS*FRSDLF Trigger: GAACAAGTCTGACCTAAAGCAGCTGAGGCAGGTCTC...TCTAAACGTCACTGGCCAGGGGACTCGCCTACTGAGAGCTGTCATTGACTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| 3UTR-3UTR GCA 90 bp | CGCTGTTCTTGGGTTTGGCCTTCTTCTCCATGGCCAGTACTAGCTCCTTCTCTTTCTTCCTTGGAGACCTaGCTCAGCTGCTTTAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: RCSWVWPSSPWPVLAPSLSSLET*LSCFRS Trigger: TGACCTAAAGCAGCTGAGGCAGGTCTCCAAGGAAGA...AAGAGAAGGAGCTAGTACTGGCCATGGAGAAGAAGGCCAAACCCAAGAACAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| 3UTR CAA 90 bp | AAGAACCACCGGTGTATCATCGGTGCGTCGGACCCGGTAAATCAGTaGTTTAAACTCCCGAACTTCGTGGAAACTTCGACGATCCGTGAT | + |
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Preference number: 2 (lower is better) Translates to: KNHRCIIGASDPVNQ*FKLPNFVETSTIRD Trigger: ATCACGGATCGTCGAAGTTTCCACGAAGTTCGGGAGTTTAAACAACTGATTTACCGGGTCCGACGCACCGATGATACACCGGTGGTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| 3UTR CAA 90 bp | CAAATCCCTTCTTACAGGTCTTTCTGGCAGTGGTTTTCTATCGCCTaGACAATCTTCAGTCGATGTGGCTGTCAGGGCCTTGCTAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: QIPSYRSFWQWFSIA*TIFSRCGCQGLARP Trigger: AGGCCTAGCAAGGCCCTGACAGCCACATCGACTGAAGATTGTCAAGGCGATAGAAAACCACTGCCAGAAAGACCTGTAAGAAGGGATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTCTTCTTGTGTGAGCAATGGCAGGATCTCCCTAAACCTCTGCACTCCACGGATGAATCCTTCTCCTaGCCTCATATACTGATCCCG | + |
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Preference number: 2 (lower is better) Translates to: SVFLCEQWQDLPKPLHSTDESFS*PHILIP Trigger: CGGGATCAGTATATGAGGGCAGGAGAAGGATTCATC...CGTGGAGTGCAGAGGTTTAGGGAGATCCTGCCATTGCTCACACAAGAAGACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR GCA 72 bp | AGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTaGACTGGGGAGCACTGCAGTTCACAGCAGGCACAA | + |
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Preference number: 3 (lower is better) Translates to: SRGRAPCCRLQD*TGEHCSSQQAQ Trigger: TTGTGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 ENSMUST00000172333.8 |
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| 3UTR GCA 72 bp | AATAACCACATAGCAGAGAGCAGAGGACGTGCTCCCTaGTGCAGATTACAGGACTGCACTGGGGAGCACTGC | + |
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Preference number: 3 (lower is better) Translates to: NNHIAESRGRAP*CRLQDCTGEHC Trigger: GCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCTCTGCTATGTGGTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 ENSMUST00000172333.8 |
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| 3UTR-3UTR CAA 90 bp | AGTAAGTCAATGACAGCTCTCAGTAGGCGAGTCCCCTGGCCAGTGACGTTTAGAGACAATCCCTCTTCCTaGGAGACCTGCCTCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SKSMTALSRRVPWPVTFRDNPSS*ETCLSC Trigger: GCAGCTGAGGCAGGTCTCCAAGGAAGAGGGATTGTC...TCTAAACGTCACTGGCCAGGGGACTCGCCTACTGAGAGCTGTCATTGACTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| 3UTR TCA 72 bp | GATTTTCATGCCTTCAGTTGGACCGACCTGATGACCTaGAGCTTGTGGAACACTGAGGAGGCCCTCGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: DFHAFSWTDLMT*SLWNTEEALGS Trigger: TGAGCCGAGGGCCTCCTCAGTGTTCCACAAGCTTCAGGTCATCAGGTCGGTCCAACTGAAGGCATGAAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR GCA 72 bp | TGCTCACCTTTCACGCCAGTTTCCCTACTCAATCTCTaGTCTGTCTCCAGGACGCACAGTGTGGCTACACAA | + |
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Preference number: 3 (lower is better) Translates to: CSPFTPVSLLNL*SVSRTHSVATQ Trigger: TTGTGTAGCCACACTGTGCGTCCTGGAGACAGAGCAGAGATTGAGTAGGGAAACTGGCGTGAAAGGTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR GCA 72 bp | GCTGCACGGATTGCCTTCATGTGTGAGTGTGACAGTTaGCAGAAAAGAACTTCTTCCCAGGTGGCACGTGAT | + |
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Preference number: 3 (lower is better) Translates to: AARIAFMCECDS*QKRTSSQVARD Trigger: ATCACGTGCCACCTGGGAAGAAGTTCTTTTCTGGCAACTGTCACACTCACACATGAAGGCAATCCGTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR CCA 72 bp | ACTCTGCCTGTCCTGCTGTGTCCAGGATGTCCAGATTaGCAGGTTCATCATCAATGCGGATCCGGATCTTAT | + |
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Preference number: 3 (lower is better) Translates to: TLPVLLCPGCPD*QVHHQCGSGSY Trigger: ATAAGATCCGGATCCGCATTGATGATGAACCTGCCAATCTGGACATCCTGGACACAGCAGGACAGGCAGAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172333.8 |
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| 3UTR GCA 72 bp | AGACACCACAGACCTTCAAGCCCTGAGTCTAAGGACTaGTCAGGGCAAGGGAACACAATTTTACTCAGACTC | + |
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Preference number: 3 (lower is better) Translates to: RHHRPSSPESKD*SGQGNTILLRL Trigger: GAGTCTGAGTAAAATTGTGTTCCCTTGCCCTGAGCAGTCCTTAGACTCAGGGCTTGAAGGTCTGTGGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR CCA 72 bp | ATACGCTTCTGTCTCTTTTCACCACCTGAGTGCCTTTaGGTCAAATGTGCAGTTCTGGGGCTCACTGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: IRFCLFSPPECL*VKCAVLGLTVG Trigger: TCCTACAGTGAGCCCCAGAACTGCACATTTGACCCAAAGGCACTCAGGTGGTGAAAAGAGACAGAAGCGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTCTTCTTGTGTGAGCAATGGCAGGATCTCCCTAAACCTCTGCACTCCACGGACCCGGTAAATCAGTaGTTTAAACTCCCGAACTTC | + |
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Preference number: 3 (lower is better) Translates to: SVFLCEQWQDLPKPLHSTDPVNQ*FKLPNF Trigger: GAAGTTCGGGAGTTTAAACAACTGATTTACCGGGTC...CGTGGAGTGCAGAGGTTTAGGGAGATCCTGCCATTGCTCACACAAGAAGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR TCA 72 bp | ATGTCCTTCTGTGAGACAGTAGCAGGAAGTTCAGGTTaGAGGGTGGTGGGGAGAATACAACACAACGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: MSFCETVAGSSG*RVVGRIQHNVL Trigger: CAGAACGTTGTGTTGTATTCTCCCCACCACCCTTCAACCTGAACTTCCTGCTACTGTCTCACAGAAGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR TCA 72 bp | CTCCTGAGTCTCTTCTGTTTGGACAATGACATTGGTTaGATGAAAGGCCTAAAAGCCATCAGGCCTCGCCTG | + |
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Preference number: 3 (lower is better) Translates to: LLSLFCLDNDIG*MKGLKAIRPRL Trigger: CAGGCGAGGCCTGATGGCTTTTAGGCCTTTCATTCAACCAATGTCATTGTCCAAACAGAAGAGACTCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR CCA 72 bp | TCCATACGCTGTTCTTGGGTTTGGCCTTCTTCTCCATaGCCAGTACTAGCTCCTTCTCTTTCTTACGGATCT | + |
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Preference number: 3 (lower is better) Translates to: SIRCSWVWPSSP*PVLAPSLSYGS Trigger: AGATCCGTAAGAAAGAGAAGGAGCTAGTACTGGCCATGGAGAAGAAGGCCAAACCCAAGAACAGCGTATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| 3UTR TCA 72 bp | TCCCTGAATCTTCGCTTCAAAACTCCAGGGAACACTTaGTTTTCATGCCTTCAGTTGGACCGACCTGATGAC | + |
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Preference number: 3 (lower is better) Translates to: SLNLRFKTPGNT*FSCLQLDRPDD Trigger: GTCATCAGGTCGGTCCAACTGAAGGCATGAAAATCAAGTGTTCCCTGGAGTTTTGAAGCGAAGATTCAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR CCA 72 bp | ACAAAGGACTTCACTAAGATTCAAGTCATCCAGCAATaGTCCCAGATCCAGAACCAGGCCTCACAGGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: TKDFTKIQVIQQ*SQIQNQASQVK Trigger: CTTTACCTGTGAGGCCTGGTTCTGGATCTGGGACCATTGCTGGATGACTTGAATCTTAGTGAAGTCCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR TCA 72 bp | GCTCAGGGCAAGGGAACACAATTTTACTCAGACTCCTaGGTCTCTTCTGTTTGGACAATGACATTGGTTGAA | + |
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Preference number: 3 (lower is better) Translates to: AQGKGTQFYSDS*VSSVWTMTLVE Trigger: TTCAACCAATGTCATTGTCCAAACAGAAGAGACTCAGGAGTCTGAGTAAAATTGTGTTCCCTTGCCCTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| 3UTR CCA 72 bp | CCTCGTATAGAACAAATCCCTTCTTACAGGTCTTTCTaGCAGTGGTTTTCTATCGCCTTGACAATCTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: PRIEQIPSYRSF*QWFSIALTIFS Trigger: ACTGAAGATTGTCAAGGCGATAGAAAACCACTGCCAGAAAGACCTGTAAGAAGGGATTTGTTCTATACGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| CDS-3UTR GCA 90 bp | GAGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACCAGGGCTGCTACAGCTaGTACCAATGGGGCGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ESRGRAPCCRLQDCTGEHQGCYS*YQWGEL Trigger: GAGCTCGCCCCATTGGTAGCAGCTGTAGCAGCCCTG...GTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| CDS-3UTR TCA 90 bp | GAGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACCTTCCTCCTGAACGGTaGCTTCAGCCTCTTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: ESRGRAPCCRLQDCTGEHLPPER*LQPLPY Trigger: GTATGGAAGAGGCTGAAGTCACCGTTCAGGAGGAAG...GTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTGATGAGTTCATGCGTGGGAGTCACGGAGCACAGGGCTTTAGACAGTAAGCAGGGCTGCTACAGCTaGTACCAATGGGGCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALMSSCVGVTEHRALDSKQGCYS*YQWGEL Trigger: GAGCTCGCCCCATTGGTAGCAGCTGTAGCAGCCCTG...CTTACTGTCTAAAGCCCTGTGCTCCGTGACTCCCACGCATGAACTCATCAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACAGCAGGCACAGAGTGCTGCAGGGCTaGTACAGCTGCTACCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PAADYRTALGSTAVHSRHRVLQG*YSCYQW Trigger: CCATTGGTAGCAGCTGTAGCAGCCCTGCAGCACTCT...GTGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172333.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGCATGGCTGTAAACTCTaGCTGTCCTGCTGTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRTCSLLQITGLHWGALQHGCKL*LSCCVQ Trigger: CTGGACACAGCAGGACAGGCAGAGTTTACAGCCATG...CTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGTAGACACGGCCCTGATGAGTTCATGCGTGGGAGTCACGGAGCACAGGGCGGGGTCATGGTCTTCTaGGAATCGGTGGCTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSRHGPDEFMRGSHGAQGGVMVF*ESVADE Trigger: TTCATCAGCCACCGATTCCCAGAAGACCATGACCCC...GCCCTGTGCTCCGTGACTCCCACGCATGAACTCATCAGGGCCGTGTCTACTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTCCTGCCCTCATATACTaGTCCCGCATGGCTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGRAPCCRLQDCTGEHCSPALIY*SRMAVN Trigger: GTTTACAGCCATGCGGGATCAGTATATGAGGGCAGG...ACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTCCTGCCCTCATATACTaGTCCCGCATGGCTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RAEDVLPAADYRTALGSTPALIY*SRMAVN Trigger: GTTTACAGCCATGCGGGATCAGTATATGAGGGCAGG...AGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR TCA 90 bp | GACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACCTTCCTCCTGAACGGTaGCTTCAGCCTCTTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: DVLPAADYRTALGSTAVHLPPER*LQPLPY Trigger: GTATGGAAGAGGCTGAAGTCACCGTTCAGGAGGAAG...GTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACAGCAGGCAAAACTCTGCCTGTCCTaGTGTGTCCAGGATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PCCRLQDCTGEHCSSQQAKLCLS*CVQDVQ Trigger: CTGGACATCCTGGACACAGCAGGACAGGCAGAGTTT...TGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACGAGACCTGCCTCAGCTaGTTTAGGTCAGACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESRGRAPCCRLQDCTGEHETCLS*FRSDLF Trigger: GAACAAGTCTGACCTAAAGCAGCTGAGGCAGGTCTC...GTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGGGGTCATGGTCTTCTaGGAATCGGTGGCTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RAEDVLPAADYRTALGSTGVMVF*ESVADE Trigger: TTCATCAGCCACCGATTCCCAGAAGACCATGACCCC...AGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | GACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACGGGGTCATGGTCTTCTaGGAATCGGTGGCTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: DVLPAADYRTALGSTAVHGVMVF*ESVADE Trigger: TTCATCAGCCACCGATTCCCAGAAGACCATGACCCC...GTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACAGCAGGCACTCAATGGTGGGGTCATaGTCTTCTGGGAATCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAADYRTALGSTAVHSRHSMVGS*SSGNRW Trigger: CCACCGATTCCCAGAAGACCATGACCCCACCATTGA...GTGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | GGTCAGACTTGTTCCCCACAAGAACCACCGGTGTATCATCGGTGCGTCGGACCCTCAATGGTGGGGTCATaGTCTTCTGGGAATCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQTCSPQEPPVYHRCVGPSMVGS*SSGNRW Trigger: CCACCGATTCCCAGAAGACCATGACCCCACCATTGA...GGGTCCGACGCACCGATGATACACCGGTGGTTCTTGTGGGGAACAAGTCTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACAGCAGTCAATGGTGGGGTCATaGTCTTCTGGGAATCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: APCCRLQDCTGEHCSSQQSMVGS*SSGNRW Trigger: CCACCGATTCCCAGAAGACCATGACCCCACCATTGA...CTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | GACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACCGCTGTTCTTGGGTTTaGCCTTCTTCTCCATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVLPAADYRTALGSTAVHRCSWV*PSSPWP Trigger: TGGCCATGGAGAAGAAGGCCAAACCCAAGAACAGCG...GTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTAGTCTTTCTTCCTCCTaGACGGTGACTTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGRAPCCRLQDCTGEHCSSLSSS*TVTSAS Trigger: AGAGGCTGAAGTCACCGTTCAGGAGGAAGAAAGACT...ACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR GCA 90 bp | AGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCCGGTGGCTGATGAACTaGATTGTCATGGCACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTCSLLQITGLHWGALQFRWLMN*IVMALF Trigger: GAAGAGTGCCATGACAATGCAGTTCATCAGCCACCG...GAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 |
||
| CDS-3UTR GCA 90 bp | GGTCAGACTTGTTCCCCACAAGAACCACCGGTGTATCATCGGTGCGTCGGACCCCGGTGGCTGATGAACTaGATTGTCATGGCACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQTCSPQEPPVYHRCVGPRWLMN*IVMALF Trigger: GAAGAGTGCCATGACAATGCAGTTCATCAGCCACCG...GGGTCCGACGCACCGATGATACACCGGTGGTTCTTGTGGGGAACAAGTCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
||
| CDS-3UTR GCA 90 bp | ACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACACATGGCTGTAAACTCTaGCTGTCCTGCTGTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TCSLLQITGLHWGALQFTHGCKL*LSCCVQ Trigger: CTGGACACAGCAGGACAGGCAGAGTTTACAGCCATG...TGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGGATGAATCCTTCTCCTaGCCTCATATACTGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QRTCSLLQITGLHWGALQDESFS*PHILIP Trigger: CGGGATCAGTATATGAGGGCAGGAGAAGGATTCATC...CTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACAGCAGGCAGAGACCTGCCTCAGCTaGTTTAGGTCAGACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCCRLQDCTGEHCSSQQAETCLS*FRSDLF Trigger: GAACAAGTCTGACCTAAAGCAGCTGAGGCAGGTCTC...TGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACAGCAGGCACTCTTCCTTGGAGACCTaGCTCAGCTGCTTTAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PAADYRTALGSTAVHSRHSSLET*LSCFRS Trigger: TGACCTAAAGCAGCTGAGGCAGGTCTCCAAGGAAGA...GTGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR GCA 90 bp | GGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCATCTTCCTTGGAGACCTaGCTCAGCTGCTTTAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRAPCCRLQDCTGEHCSSSSLET*LSCFRS Trigger: TGACCTAAAGCAGCTGAGGCAGGTCTCCAAGGAAGA...TGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTAACTCCCGAACTTCGTaGAAACTTCGACGATCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGRAPCCRLQDCTGEHCSNSRTS*KLRRSV Trigger: CACGGATCGTCGAAGTTTCCACGAAGTTCGGGAGTT...ACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCAGATGAATCCTTCTCCTaGCCTCATATACTGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: REQRTCSLLQITGLHWGADESFS*PHILIP Trigger: CGGGATCAGTATATGAGGGCAGGAGAAGGATTCATC...TGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACAGCAGGCACTCTTCTGGGAATCGGTaGCTGATGAACTGCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PAADYRTALGSTAVHSRHSSGNR*LMNCIV Trigger: GACAATGCAGTTCATCAGCCACCGATTCCCAGAAGA...GTGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | GCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACAGCAGTCTTCTGGGAATCGGTaGCTGATGAACTGCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: APCCRLQDCTGEHCSSQQSSGNR*LMNCIV Trigger: GACAATGCAGTTCATCAGCCACCGATTCCCAGAAGA...CTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTAAGCATCTTCAATGGTaGGGTCATGGTCTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RAEDVLPAADYRTALGSTKHLQW*GHGLLG Trigger: TCCCAGAAGACCATGACCCCACCATTGAAGATGCTT...AGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTAAGCATCTTCAATGGTaGGGTCATGGTCTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGRAPCCRLQDCTGEHCSKHLQW*GHGLLG Trigger: TCCCAGAAGACCATGACCCCACCATTGAAGATGCTT...ACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | CAGACTTGTTCCCCACAAGAACCACCGGTGTATCATCGGTGCGTCGGACCCGGTCCAGGATGTCCAGATTaGCAGGTTCATCATCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: QTCSPQEPPVYHRCVGPGPGCPD*QVHHQC Trigger: GCATTGATGATGAACCTGCCAATCTGGACATCCTGG...ACCGGGTCCGACGCACCGATGATACACCGGTGGTTCTTGTGGGGAACAAGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTCCAGGATGTCCAGATTaGCAGGTTCATCATCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: RAEDVLPAADYRTALGSTPGCPD*QVHHQC Trigger: GCATTGATGATGAACCTGCCAATCTGGACATCCTGG...AGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTTCCATACGCTGTTCTTaGGTTTGGCCTTCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAEDVLPAADYRTALGSTSIRCS*VWPSSP Trigger: TGGAGAAGAAGGCCAAACCCAAGAACAGCGTATGGA...AGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCATCCATACGCTGTTCTTaGGTTTGGCCTTCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: REQRTCSLLQITGLHWGASIRCS*VWPSSP Trigger: TGGAGAAGAAGGCCAAACCCAAGAACAGCGTATGGA...TGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTTCTTGTGTGAGCAATGGCAGGATCTCCCTAAACCTCTGCACTCCACGAGAGTGCTGCAGGGCTaGTACAGCTGCTACCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SVFLCEQWQDLPKPLHSTRVLQG*YSCYQW Trigger: CCATTGGTAGCAGCTGTAGCAGCCCTGCAGCACTCT...CGTGGAGTGCAGAGGTTTAGGGAGATCCTGCCATTGCTCACACAAGAAGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
||
| 3UTR CAA 72 bp | ACTGGTCTGACCCTGCATGTTTCCGGCTCTGTCTTCTaGTGTGAGCAATGGCAGGATCTCCCTAAACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGLTLHVSGSVF*CEQWQDLPKPL Trigger: CAGAGGTTTAGGGAGATCCTGCCATTGCTCACACAAGAAGACAGAGCCGGAAACATGCAGGGTCAGACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGGGCAAGGGAACACAATTTTACTCAGACTCCTGAGTCTCTTCTGTTTGGACAGGGCTGCTACAGCTaGTACCAATGGGGCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRAREHNFTQTPESLLFGQGCYS*YQWGEL Trigger: GAGCTCGCCCCATTGGTAGCAGCTGTAGCAGCCCTG...TCCAAACAGAAGAGACTCAGGAGTCTGAGTAAAATTGTGTTCCCTTGCCCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
||
| CDS-3UTR GCA 90 bp | GGTCAGACTTGTTCCCCACAAGAACCACCGGTGTATCATCGGTGCGTCGGACCCCAGGTTCATCATCAATaGGGATCCGGATCTTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQTCSPQEPPVYHRCVGPQVHHQ*GSGSYK Trigger: CTTATAAGATCCGGATCCGCATTGATGATGAACCTG...GGGTCCGACGCACCGATGATACACCGGTGGTTCTTGTGGGGAACAAGTCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGAGTCACGGAGCACAGGGCTTTAGACAGTAAGTCAATGACAGCTCTCAGTAAACTCTGCCTGTCCTaGTGTGTCCAGGATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGVTEHRALDSKSMTALSKLCLS*CVQDVQ Trigger: CTGGACATCCTGGACACAGCAGGACAGGCAGAGTTT...ACTGAGAGCTGTCATTGACTTACTGTCTAAAGCCCTGTGCTCCGTGACTCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| CDS-3UTR GCA 90 bp | ATAGCAGAGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGCAGGTTCATCATCAATaGGGATCCGGATCTTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: IAESRGRAPCCRLQDCTGQVHHQ*GSGSYK Trigger: CTTATAAGATCCGGATCCGCATTGATGATGAACCTG...CCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCTCTGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
||
| CDS-3UTR CCA 90 bp | AGTAAGTCAATGACAGCTCTCAGTAGGCGAGTCCCCTGGCCAGTGACGTTTAGATGGCCTTCTTCTCCATaGCCAGTACTAGCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKSMTALSRRVPWPVTFRWPSSP*PVLAPS Trigger: AGAAGGAGCTAGTACTGGCCATGGAGAAGAAGGCCA...TCTAAACGTCACTGGCCAGGGGACTCGCCTACTGAGAGCTGTCATTGACTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
||
| 3UTR CAA 72 bp | CGGTGTATCATCGGTGCGTCGGACCCGGTAAATCAGTaGTTTAAACTCCCGAACTTCGTGGAAACTTCGACG | + |
|
Preference number: 4 (lower is better) Translates to: RCIIGASDPVNQ*FKLPNFVETST Trigger: CGTCGAAGTTTCCACGAAGTTCGGGAGTTTAAACAACTGATTTACCGGGTCCGACGCACCGATGATACACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170377.8 ENSMUST00000172333.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTTCTTGTGTGAGCAATGGCAGGATCTCCCTAAACCTCTGCACTCCACGAAGCATCTTCAATGGTaGGGTCATGGTCTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVFLCEQWQDLPKPLHSTKHLQW*GHGLLG Trigger: TCCCAGAAGACCATGACCCCACCATTGAAGATGCTT...CGTGGAGTGCAGAGGTTTAGGGAGATCCTGCCATTGCTCACACAAGAAGACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| CDS-3UTR CCA 90 bp | AGTAAGTCAATGACAGCTCTCAGTAGGCGAGTCCCCTGGCCAGTGACGTTTAGACCAGGATGTCCAGATTaGCAGGTTCATCATCAATGC | + |
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Preference number: 4 (lower is better) Translates to: SKSMTALSRRVPWPVTFRPGCPD*QVHHQC Trigger: GCATTGATGATGAACCTGCCAATCTGGACATCCTGG...TCTAAACGTCACTGGCCAGGGGACTCGCCTACTGAGAGCTGTCATTGACTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
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| CDS-3UTR GCA 90 bp | GTGGGAGTCACGGAGCACAGGGCTTTAGACAGTAAGTCAATGACAGCTCTCAGTCAGGTTCATCATCAATaGGGATCCGGATCTTATAAG | + |
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Preference number: 4 (lower is better) Translates to: VGVTEHRALDSKSMTALSQVHHQ*GSGSYK Trigger: CTTATAAGATCCGGATCCGCATTGATGATGAACCTG...ACTGAGAGCTGTCATTGACTTACTGTCTAAAGCCCTGTGCTCCGTGACTCCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
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| 3UTR CAA 72 bp | GACAAGGCCTGTGGTGCAGTGGTCCTAAGGAAGGATTaGTGTTCATTTACTTGTGCTCTTGTTTCTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: DKACGAVVLRKD*CSFTCALVSLR Trigger: TCTCAGAGAAACAAGAGCACAAGTAAATGAACACAAATCCTTCCTTAGGACCACTGCACCACAGGCCTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| CDS-3UTR CCA 90 bp | GTACACACACTCTCCAGGGTAGAAACCATTTACACAAATTTACATCAGCAACATCGCTGTTCTTGGGTTTaGCCTTCTTCTCCATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VHTLSRVETIYTNLHQQHRCSWV*PSSPWP Trigger: TGGCCATGGAGAAGAAGGCCAAACCCAAGAACAGCG...ATGTTGCTGATGTAAATTTGTGTAAATGGTTTCTACCCTGGAGAGTGTGTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029692.15 |
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| CDS-3UTR CCA 90 bp | GTACACACACTCTCCAGGGTAGAAACCATTTACACAAATTTACATCAGCAACATAACTCCCGAACTTCGTaGAAACTTCGACGATCCGTG | + |
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Preference number: 4 (lower is better) Translates to: VHTLSRVETIYTNLHQQHNSRTS*KLRRSV Trigger: CACGGATCGTCGAAGTTTCCACGAAGTTCGGGAGTT...ATGTTGCTGATGTAAATTTGTGTAAATGGTTTCTACCCTGGAGAGTGTGTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029692.15 |
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| CDS-3UTR CCA 90 bp | ACCATTTACACAAATTTACATCAGCAACATAACCAAAACAATGGCCGACCAAATTGGCCTTCTTCTCCATaGCCAGTACTAGCTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TIYTNLHQQHNQNNGRPNWPSSP*PVLAPS Trigger: AGAAGGAGCTAGTACTGGCCATGGAGAAGAAGGCCA...ATTTGGTCGGCCATTGTTTTGGTTATGTTGCTGATGTAAATTTGTGTAAATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029692.15 |
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| CDS-3UTR CAA 90 bp | GAGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACGACAATCCCTCTTCCTaGGAGACCTGCCTCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ESRGRAPCCRLQDCTGEHDNPSS*ETCLSC Trigger: GCAGCTGAGGCAGGTCTCCAAGGAAGAGGGATTGTC...GTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
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| CDS-3UTR CAA 90 bp | CCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACAGCAGGCACGACAATCCCTCTTCCTaGGAGACCTGCCTCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PAADYRTALGSTAVHSRHDNPSS*ETCLSC Trigger: GCAGCTGAGGCAGGTCTCCAAGGAAGAGGGATTGTC...GTGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
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| CDS-3UTR CAA 90 bp | CCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCACAGCAGGCACCCCAGCATCACTAGTTaGTATTCCCGGGAGAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: PAADYRTALGSTAVHSRHPSITS*YSRESA Trigger: AGCACTCTCCCGGGAATACAAACTAGTGATGCTGGG...GTGCCTGCTGTGAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| CDS-3UTR CAA 90 bp | GGCACAAGGAGCACTGCAGTTCACAGGAGCACAGCCCACTTCACTCAGGTGACCCCCAGCATCACTAGTTaGTATTCCCGGGAGAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: GTRSTAVHRSTAHFTQVTPSITS*YSRESA Trigger: AGCACTCTCCCGGGAATACAAACTAGTGATGCTGGG...GGTCACCTGAGTGAAGTGGGCTGTGCTCCTGTGAACTGCAGTGCTCCTTGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170377.8 ENSMUST00000172333.8 |
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| CDS-3UTR CAA 90 bp | AGGAGTAGACACGGCCCTGATGAGTTCATGCGTGGGAGTCACGGAGCACAGGGCTGCTTTAGGTCAGACTaGTTCCCCACAAGAACCACC | + |
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Preference number: 5 (lower is better) Translates to: RSRHGPDEFMRGSHGAQGCFRSD*FPTRTT Trigger: GGTGGTTCTTGTGGGGAACAAGTCTGACCTAAAGCA...GCCCTGTGCTCCGTGACTCCCACGCATGAACTCATCAGGGCCGTGTCTACTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029692.15 |
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| CDS-3UTR CAA 90 bp | CAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTCCAGGATGTCCAGATaGGCAGGTTCATCATCAATG | + |
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Preference number: 5 (lower is better) Translates to: QRTCSLLQITGLHWGALQSRMSR*AGSSSM Trigger: CATTGATGATGAACCTGCCAATCTGGACATCCTGGA...CTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000172252.2 |
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| CDS-3UTR CAA 90 bp | AGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGAGCACTGCAGTTCTGCTTTAGGTCAGACTaGTTCCCCACAAGAACCACC | + |
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Preference number: 5 (lower is better) Translates to: RTCSLLQITGLHWGALQFCFRSD*FPTRTT Trigger: GGTGGTTCTTGTGGGGAACAAGTCTGACCTAAAGCA...GAACTGCAGTGCTCCCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
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| CDS-3UTR CAA 90 bp | AGGAATCCGCTCCGCAGACGCCTGCTCACCTTTCACGCCAGTTTCCCTACTCAATCCAGGATGTCCAGATaGGCAGGTTCATCATCAATG | + |
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Preference number: 5 (lower is better) Translates to: RNPLRRRLLTFHASFPTQSRMSR*AGSSSM Trigger: CATTGATGATGAACCTGCCAATCTGGACATCCTGGA...TTGAGTAGGGAAACTGGCGTGAAAGGTGAGCAGGCGTCTGCGGAGCGGATTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| CDS-3UTR CAA 90 bp | ATAGCAGAGAGCAGAGGACGTGCTCCCTGCTGCAGATTACAGGACTGCACTGGGGACCCGGTAAATCAGTaGTTTAAACTCCCGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: IAESRGRAPCCRLQDCTGDPVNQ*FKLPNF Trigger: GAAGTTCGGGAGTTTAAACAACTGATTTACCGGGTC...CCCAGTGCAGTCCTGTAATCTGCAGCAGGGAGCACGTCCTCTGCTCTCTGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029692.15 ENSMUST00000172252.2 |
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| CDS-3UTR CAA 90 bp | CAAGTCATCCAGCAATGGTCCCAGATCCAGAACCAGGCCTCACAGGTAAAGAAACCCAGCATCACTAGTTaGTATTCCCGGGAGAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: QVIQQWSQIQNQASQVKKPSITS*YSRESA Trigger: AGCACTCTCCCGGGAATACAAACTAGTGATGCTGGG...TTTCTTTACCTGTGAGGCCTGGTTCTGGATCTGGGACCATTGCTGGATGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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| CDS-3UTR CAA 90 bp | GCCCTGATGAGTTCATGCGTGGGAGTCACGGAGCACAGGGCTTTAGACAGTAAGGACCCGGTAAATCAGTaGTTTAAACTCCCGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: ALMSSCVGVTEHRALDSKDPVNQ*FKLPNF Trigger: GAAGTTCGGGAGTTTAAACAACTGATTTACCGGGTC...CTTACTGTCTAAAGCCCTGTGCTCCGTGACTCCCACGCATGAACTCATCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029692.15 |
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| CDS CAA 90 bp | GTCATGGCACTCTTCCCAACTCCACCGGCACCCAGCATCACTAGTTaGTATTCCCGGGAGAGTGCTGCAGGGCTGCTACAGCTGCTACCA | + |
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Preference number: 6 (lower is better) Translates to: VMALFPTPPAPSITS*YSRESAAGLLQLLP Trigger: TGGTAGCAGCTGTAGCAGCCCTGCAGCACTCTCCCGGGAATACAAACTAGTGATGCTGGGTGCCGGTGGAGTTGGGAAGAGTGCCATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000171645.8 |
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| CDS CAA 90 bp | CAGGACACACTCTTCCCAACTCCACCGGCACCCAGCATCACTAGTTaGTATTCCCGGGAGAGTGCTGCAGGGCTGCTACAGCTGCTACCA | + |
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Preference number: 6 (lower is better) Translates to: QDTLFPTPPAPSITS*YSRESAAGLLQLLP Trigger: TGGTAGCAGCTGTAGCAGCCCTGCAGCACTCTCCCGGGAATACAAACTAGTGATGCTGGGTGCCGGTGGAGTTGGGAAGAGTGTGTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172333.8 |
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| CDS GCA 72 bp | TCACTAGTTTGTATTCCCGGGAGAGTGCTGCAGGGCTaGTACAGCTGCTACCAATGGGGCGAGCTCCGGACT | + |
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Preference number: 6 (lower is better) Translates to: SLVCIPGRVLQG*YSCYQWGELRT Trigger: AGTCCGGAGCTCGCCCCATTGGTAGCAGCTGTAGCAGCCCTGCAGCACTCTCCCGGGAATACAAACTAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000171645.8 ENSMUST00000172333.8 |
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| CDS CAA 72 bp | CTCTTCCCAACTCCACCGGCACCCAGCATCACTAGTTaGTATTCCCGGGAGAGTGCTGCAGGGCTGCTACAG | + |
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Preference number: 6 (lower is better) Translates to: LFPTPPAPSITS*YSRESAAGLLQ Trigger: CTGTAGCAGCCCTGCAGCACTCTCCCGGGAATACAAACTAGTGATGCTGGGTGCCGGTGGAGTTGGGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000171645.8 ENSMUST00000172333.8 |
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| CDS GCA 72 bp | GGGTCATGGTCTTCTGGGAATCGGTGGCTGATGAACTaGATTGTCATGGCACTCTTCCCAACTCCACCGGCA | + |
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Preference number: 6 (lower is better) Translates to: GSWSSGNRWLMN*IVMALFPTPPA Trigger: TGCCGGTGGAGTTGGGAAGAGTGCCATGACAATGCAGTTCATCAGCCACCGATTCCCAGAAGACCATGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029692.15 ENSMUST00000170377.8 ENSMUST00000171645.8 |
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| CDS CCA 72 bp | TTAGTACCTGTCCTGCTGTGTCCAGGATGTCCAGATTaGCAGGTTCATCATCAATGCGGATCCGGATCTTAT | + |
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Preference number: 6 (lower is better) Translates to: LVPVLLCPGCPD*QVHHQCGSGSY Trigger: ATAAGATCCGGATCCGCATTGATGATGAACCTGCCAATCTGGACATCCTGGACACAGCAGGACAGGTACTAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170377.8 |
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