RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIPOR1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038604

Ensembl transcript IDs: ENSMUST00000043531.10

Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTaGCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGG +
Preference number: 1 (lower is better)
Translates to: RNLWGEVTGTSLHPP*QCLMSPENKGRDTG
Trigger: CCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
3UTR GCA 90 bp CTGACCAAATGGCCAGGCCTCCGACACTGTGTGTGGCAAAGACTGTaGAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCA +
Preference number: 1 (lower is better)
Translates to: LTKWPGLRHCVWQRL*RTAAGRHFISGILP
Trigger: TGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCCTGGCCATTTGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
3UTR CCA 90 bp AGGCAAGGCAAGCTGACCAAATGGCCAGGCCTCCGACACTGTGTGTaGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCA +
Preference number: 1 (lower is better)
Translates to: RQGKLTKWPGLRHCV*QRLCRTAAGRHFIS
Trigger: TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCCTGGCCATTTGGTCAGCTTGCCTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
3UTR CCA 90 bp AATACAAACCCAAGGGATGTGATGAGGCAAGGCAAGCTGACCAAATaGCCAGGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACC +
Preference number: 1 (lower is better)
Translates to: NTNPRDVMRQGKLTK*PGLRHCVWQRLCRT
Trigger: GGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCCTGGCCATTTGGTCAGCTTGCCTTGCCTCATCACATCCCTTGGGTTTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
3UTR-3UTR CCA 90 bp GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGGTGGGGAGAGGTGACTaGAACCAGCCTTCACCCTCC +
Preference number: 2 (lower is better)
Translates to: AEPRLGGTSFQAFCQPQWVGRGD*NQPSPS
Trigger: GGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCAC...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
3UTR-3UTR GCA 90 bp GTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCACACCCTCCCTGCCAGTaGCTGATGAGCCCTGAAAAC +
Preference number: 2 (lower is better)
Translates to: VCGKDCAEPRLGGTSFQAHPPCQ*LMSPEN
Trigger: GTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTG...TGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
3UTR-3UTR GCA 90 bp ACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGCCTTCACCCTCCCTaGCAGTGCCTGATGAGCCCT +
Preference number: 2 (lower is better)
Translates to: TLCVAKTVQNRGWEALHFSLHPP*QCLMSP
Trigger: AGGGCTCATCAGGCACTGGCAGGGAGGGTGAAGGCT...GAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
3UTR GCA 72 bp TGGCCAGGCCTCCGACACTGTGTGTGGCAAAGACTGTaGAGAACCGCGGCTGGGAGGCACTTCATTTCAGGC +
Preference number: 3 (lower is better)
Translates to: WPGLRHCVWQRL*RTAAGRHFISG
Trigger: GCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
3UTR CCA 72 bp AAGCTGACCAAATGGCCAGGCCTCCGACACTGTGTGTaGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCAC +
Preference number: 3 (lower is better)
Translates to: KLTKWPGLRHCV*QRLCRTAAGRH
Trigger: GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCCTGGCCATTTGGTCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
3UTR TCA 72 bp CAGCCTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTaGAAACAAGGGAAGGGACACTGGGAGCCGGCAATT +
Preference number: 3 (lower is better)
Translates to: QPSPSLPVPDEP*KQGKGHWEPAI
Trigger: AATTGCCGGCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
3UTR GCA 72 bp TGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTaGCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGG +
Preference number: 3 (lower is better)
Translates to: WGEVTGTSLHPP*QCLMSPENKGR
Trigger: CCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
3UTR CCA 72 bp CCAAGGGATGTGATGAGGCAAGGCAAGCTGACCAAATaGCCAGGCCTCCGACACTGTGTGTGGCAAAGACTG +
Preference number: 3 (lower is better)
Translates to: PRDVMRQGKLTK*PGLRHCVWQRL
Trigger: CAGTCTTTGCCACACACAGTGTCGGAGGCCTGGCCATTTGGTCAGCTTGCCTTGCCTCATCACATCCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
3UTR TCA 72 bp ATTAGATTTTCATTGATAGGAATTTGTGGGGAGAGGTaGCTGGAACCAGCCTTCACCCTCCCTGCCAGTGCC +
Preference number: 3 (lower is better)
Translates to: IRFSLIGICGER*LEPAFTLPASA
Trigger: GGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCTATCAATGAAAATCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp TGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCGGCAACTGAGCAGGCGGCGCTaGGGCCGCACCGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: CQCLMSPENKGRDTGSRQLSRRR*GRTDRD
Trigger: GTCCCTGTCGGTGCGGCCGCAGCGCCGCCTGCTCAG...TTGCCGGCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCGCCCGCGCTCGTGGCTaGCGAGGACGCCTGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RNLWGEVTGTSLHPPCQCARARG*RGRLRR
Trigger: CCTTCGCAGGCGTCCTCGGCAGCCACGAGCGCGGGC...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACAGGGCCCAGGCCTCCTaGCAGCGCAGGGGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: GLRHCVWQRLCRTAAGRHRAQAS*QRRGPN
Trigger: ATTTGGACCCCTGCGCTGCCAGGAGGCCTGGGCCCT...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATTCCTCCCCGCACTGCTaGAGGCTCTGCCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: FVGRGDWNQPSPSLPVPDSSPHC*RLCRAA
Trigger: AGCCGCCCGGCAGAGCCTGCAGCAGTGCGGGGAGGA...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATCCTTCCTCCCCGCACTaGTGCAGGCTCTGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: FVGRGDWNQPSPSLPVPDPSSPH*CRLCRA
Trigger: CGCCCGGCAGAGCCTGCAGCAGTGCGGGGAGGAAGG...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCACGCCTGCGAAGGACTaGCTCCTACTGACCCGGGCG +
Preference number: 4 (lower is better)
Translates to: PPCQCLMSPENKGRDTGSTPAKD*LLLTRA
Trigger: CGCCCGGGTCAGTAGGAGCCAGTCCTTCGCAGGCGT...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCTCGATGGCCTCGAGTaGCCTCGGCCAGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PPCQCLMSPENKGRDTGSLDGLE*PRPGCL
Trigger: GAGACAGCCTGGCCGAGGCCACTCGAGGCCATCGAG...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCACTGCTCCCCCGGGCCTaGTTGGGGCCTCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HCVWQRLCRTAAGRHFISLLPRA*LGPPGQ
Trigger: CTGCCCAGGAGGCCCCAACCAGGCCCGGGGGAGCAG...TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCGGAGGGGAGGCTGGGTaGCTACAGGGCAGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PPCQCLMSPENKGRDTGSGGEAG*LQGRGS
Trigger: TGAACCTCTGCCCTGTAGTCACCCAGCCTCCCCTCC...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp AATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGCAGGTCCAGCCTCTCTaGCTGCGGCACCTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: NLWGEVTGTSLHPPCQCLQVQPL*LRHLGS
Trigger: GCTCCCAAGGTGCCGCAGCCAGAGAGGCTGGACCTG...CAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp TTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATGGGCCTCTCGACTCCCTaGGGACCCAGTGCTATAGGC +
Preference number: 4 (lower is better)
Translates to: LWGEVTGTSLHPPCQCLMGLSTP*GPSAIG
Trigger: GCCTATAGCACTGGGTCCCCAGGGAGTCGAGAGGCC...CATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCCGTTGCCTCAGGGACTaGGGCTTGAGCAACTGCGGC +
Preference number: 4 (lower is better)
Translates to: LRHCVWQRLCRTAAGRHFRCLRD*GLSNCG
Trigger: GCCGCAGTTGCTCAAGCCCCAGTCCCTGAGGCAACG...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCCAGAGCCTGTGGAGGTaGGGGGAGAGGGCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: AKTVQNRGWEALHFRHSAQSLWR*GERAWL
Trigger: CAACCACGCCCTCTCCCCTCACCTCCACAGGCTCTG...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp AATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGACTGGCTGCAGAAGGTaGGGAGCACCCGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: NLWGEVTGTSLHPPCQCLTGCRR*GAPAPQ
Trigger: CTGTGGAGCGGGTGCTCCTCACCTTCTGCAGCCAGT...CAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGGACAGGCTCCGAAGCTaGGTGCTGACAGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: AEPRLGGTSFQAFCQPQWDRLRS*VLTAAM
Trigger: CATGGCTGCTGTCAGCACTCAGCTTCGGAGCCTGTC...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACGGAAGCTGTGGGGTCTaGTTTAGTGTAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GLRHCVWQRLCRTAAGRHGSCGV*FSVGRG
Trigger: TCCCCTCCCTACACTAAAGCAGACCCCACAGCTTCC...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp TTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATGTCAGCAGGAGGCGGCTaGAGTGGTACAGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LWGEVTGTSLHPPCQCLMSAGGG*SGTGAG
Trigger: TCCAGCACCTGTACCACTGCAGCCGCCTCCTGCTGA...CATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCCGGCCACTCGAGTCTaGACGTCCCCATCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RNLWGEVTGTSLHPPCQCPATRV*TSPSSS
Trigger: GCTGGAAGATGGGGACGTGCAGACTCGAGTGGCCGG...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCTGTGCTGGCCATGCTaGTGGGCCCAAAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: PPCQCLMSPENKGRDTGSLCWPC*WAQRCR
Trigger: CCTGCATCTTTGGGCCCAGCAGCATGGCCAGCACAG...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp AATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGGTAGGGAGGGGAGGCTaGGTGACTACAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NLWGEVTGTSLHPPCQCLVGRGG*VTTGQR
Trigger: CCTCTGCCCTGTAGTCACCCAGCCTCCCCTCCCTAC...CAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCAGACGGGCACCGTACTaGCTGCAGAAGGTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PPCQCLMSPENKGRDTGSRRAPY*LQKVRS
Trigger: GCTCCTCACCTTCTGCAGCCAGTACGGTGCCCGTCT...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp AACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACCTGGTTGGGGCCTCCTaGGCAGCTTCTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: NRGWEALHFRHSANPSGNLVGAS*AASVPG
Trigger: CCCTGGGACAGAAGCTGCCCAGGAGGCCCCAACCAG...GTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCGGGCTTGGGGTACTGTaGGTAGGGCTTGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: AKTVQNRGWEALHFRHSAGLGVL*VGLGVA
Trigger: GGCTACCCCAAGCCCTACTCACAGTACCCCAAGCCC...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp AATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGTGCCCTCAGGAGCCTTaGTACAGCCCAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: NLWGEVTGTSLHPPCQCLCPQEP*YSPKPG
Trigger: GCCTGGCTTTGGGCTGTATCAAGGCTCCTGAGGGCA...CAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp ACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCCCCAGCTCCTCCCGTTaGCTCAGGGACTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TLCVAKTVQNRGWEALHFPSSSR*LRDWGL
Trigger: CAAGCCCCAGTCCCTGAGGCAACGGGAGGAGCTGGG...GAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTAGCCGAGTCACCTCCTaGTCCAGGCCCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LHPPCQCLMSPENKGRDTSRVTS*SRPCSS
Trigger: TGAGCTGCAGGGCCTGGAGCAGGAGGTGACTCGGCT...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCGCAGGGGTCCAAATGTaGCCAGTTTCAGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LRHCVWQRLCRTAAGRHFAGVQM*PVSAGG
Trigger: GCCTCCTGCTGAAACTGGGCACATTTGGACCCCTGC...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTTCCACAGCCACAACCTaGGGCAGGGCGGCAAACAGG +
Preference number: 4 (lower is better)
Translates to: LHPPCQCLMSPENKGRDTSTATT*GRAANR
Trigger: CCTGTTTGCCGCCCTGCCCCAGGTTGTGGCTGTGGA...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp AATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGCTTCGGAAGGCAACTTaGACAGGCAGGGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: NLWGEVTGTSLHPPCQCLLRKAT*TGRGSG
Trigger: GCCTGAGCCCCTGCCTGTCCAAGTTGCCTTCCGAAG...CAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCAGGAGGCGGCTGCAGTaGTACAGGTGCTGGACCAAG +
Preference number: 4 (lower is better)
Translates to: RNLWGEVTGTSLHPPCQCRRRLQ*YRCWTK
Trigger: CTTGGTCCAGCACCTGTACCACTGCAGCCGCCTCCT...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp AACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACTGTAGGCACCATCCCTaGGACGCCGCTGGACACAGT +
Preference number: 4 (lower is better)
Translates to: NRGWEALHFRHSANPSGNCRHHP*DAAGHS
Trigger: ACTGTGTCCAGCGGCGTCTCAGGGATGGTGCCTACA...GTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCTGGGGTAGCCTGGGTTaGGTCTGTTGCATTGGGAAC +
Preference number: 4 (lower is better)
Translates to: PPCQCLMSPENKGRDTGSWGSLG*VCCIGN
Trigger: GTTCCCAATGCAACAGACTCAACCCAGGCTACCCCA...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGGGCCAGGTTATGTTCTaGATGTTGGGGTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: AEPRLGGTSFQAFCQPQWGQVMF*MLGFRG
Trigger: GCCCCTGAACCCCAACATTCAGAACATAACCTGGCC...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp GTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATCAGGGACTGGGGCTTaGGCAACTGCGGCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: VCGKDCAEPRLGGTSFQASGTGA*ATAARL
Trigger: TAACCTGGCCGCAGTTGCTCAAGCCCCAGTCCCTGA...TGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp AACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACGGCCTTGTCTCTGCATaGGCAGACTCTCCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: NRGWEALHFRHSANPSGNGLVSA*ADSPAE
Trigger: CTCGGCTGGAGAGTCTGCTCATGCAGAGACAAGGCC...GTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTAGGGCAGAGGTTCAGTaGCTGGGCCGGTGGATTCTG +
Preference number: 4 (lower is better)
Translates to: LHPPCQCLMSPENKGRDTRAEVQ*LGRWIL
Trigger: CAGAATCCACCGGCCCAGGCACTGAACCTCTGCCCT...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCCTGCAGTGGTACAGGTaGTGGACCAAGGTAGCATCC +
Preference number: 4 (lower is better)
Translates to: LRHCVWQRLCRTAAGRHFLQWYR*WTKVAS
Trigger: GGATGCTACCTTGGTCCAGCACCTGTACCACTGCAG...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp GTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATGCTGGGCCCAAAGATaGAGGGCAGAGCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: VCGKDCAEPRLGGTSFQACWAQR*RAEHPG
Trigger: CCCTGGATGCTCTGCCCTGCATCTTTGGGCCCAGCA...TGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCCTTCCGTGGGGGCCCTaGTGGGCTGAAGACAGTGAA +
Preference number: 4 (lower is better)
Translates to: AKTVQNRGWEALHFRHSALPWGP*WAEDSE
Trigger: TTCACTGTCTTCAGCCCACCAGGGCCCCCACGGAAG...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp TTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATGGTTGCACCAGAGGCTTaGGAGTTGAGTGTCGAGCTG +
Preference number: 4 (lower is better)
Translates to: LWGEVTGTSLHPPCQCLMVAPEA*ELSVEL
Trigger: CAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAAC...CATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCCAGTGGTACAGGTGCTaGACCAAGGTAGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LRHCVWQRLCRTAAGRHFQWYRC*TKVASR
Trigger: CCTGGATGCTACCTTGGTCCAGCACCTGTACCACTG...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp ACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCTCGGCTAAGCCTGGCTaGCGCAGGGAAAGACGGGCA +
Preference number: 4 (lower is better)
Translates to: TLCVAKTVQNRGWEALHFSAKPG*RRERRA
Trigger: TGCCCGTCTTTCCCTGCGCCAGCCAGGCTTAGCCGA...GAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCAAACTCGCCCAACTGTaGCTCCAGCTCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PPCQCLMSPENKGRDTGSKLAQL*LQLILQ
Trigger: CTGGAGAATGAGCTGGAGGCACAGTTGGGCGAGTTT...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCGTCAGGCCTTGTCTCTaGATGAGCAGACTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RNLWGEVTGTSLHPPCQCVRPCL*MSRLSS
Trigger: GCTGGAGAGTCTGCTCATGCAGAGACAAGGCCTGAC...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCTCCCTGAGACGCCGCTaGACACAGTATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: LRHCVWQRLCRTAAGRHFSLRRR*TQYASY
Trigger: GTATGAAGCATACTGTGTCCAGCGGCGTCTCAGGGA...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp AATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGCGGCAAACAGGTCCTTaGTCTCACAGGAGACACTGC +
Preference number: 4 (lower is better)
Translates to: NLWGEVTGTSLHPPCQCLRQTGP*SHRRHC
Trigger: GCAGTGTCTCCTGTGAGACCAAGGACCTGTTTGCCG...CAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCCCAGGGATGGGGTCATaGCTGGCTCTTCATCCATGG +
Preference number: 4 (lower is better)
Translates to: AKTVQNRGWEALHFRHSAPGMGS*LALHPW
Trigger: CCATGGATGAAGAGCCAGCCATGACCCCATCCCTGG...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCGGACTTGTGGCAGAATaGCCATTGTTGAGGACAGGC +
Preference number: 4 (lower is better)
Translates to: PPCQCLMSPENKGRDTGSGLVAE*PLLRTG
Trigger: GCCTGTCCTCAACAATGGCCATTCTGCCACAAGTCC...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGAGTATGGGTAGGGCTTaGGGTACTGTGAGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: AEPRLGGTSFQAFCQPQWSMGRA*GTVSRA
Trigger: AGCCCTACTCACAGTACCCCAAGCCCTACCCATACT...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp TGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCGGCAACGTTCACACACTTCCTaGAATACACGCGCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: CQCLMSPENKGRDTGSRQRSHTS*NTRASR
Trigger: GCGGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACG...TTGCCGGCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTCCCCATCTTCCAGCTaGTCCAGGAAGCACAAGAGA +
Preference number: 4 (lower is better)
Translates to: AEPRLGGTSFQAFCQPQWSPSSS*SRKHKR
Trigger: TCTCTTGTGCTTCCTGGACCAGCTGGAAGATGGGGA...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAATCCCTGGGGACCCAGTaGTATAGGCGCGGACCATGT +
Preference number: 4 (lower is better)
Translates to: AAGRHFISGILPTPVVTKSLGTQ*YRRGPC
Trigger: ACATGGTCCGCGCCTATAGCACTGGGTCCCCAGGGA...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTTGTCCCACACCTGCTTaGCACTACTCTCTATCCGGC +
Preference number: 4 (lower is better)
Translates to: LHPPCQCLMSPENKGRDTCPTPA*HYSLSG
Trigger: GCCGGATAGAGAGTAGTGGCAAGCAGGTGTGGGACA...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCTGGGCCGGTGGATTCTaGAGAGGAGCTGGAGATTAT +
Preference number: 4 (lower is better)
Translates to: RNLWGEVTGTSLHPPCQCWAGGF*RGAGDY
Trigger: ATAATCTCCAGCTCCTCTGCAGAATCCACCGGCCCA...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCGACTCTGGTAAGAGGTaGAGGAAGCTGTGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: AKTVQNRGWEALHFRHSADSGKR*RKLWGL
Trigger: CAGACCCCACAGCTTCCTGCACCTCTTACCAGAGTC...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTCGGCACCTTGGGAGCTaGATGGGCCACAGAAAACAT +
Preference number: 4 (lower is better)
Translates to: LHPPCQCLMSPENKGRDTRHLGS*MGHRKH
Trigger: ATGTTTTCTGTGGCCCATCCAGCTCCCAAGGTGCCG...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCGGCGGGAATTCCTTTTaGACTCCTTTATCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: PPCQCLMSPENKGRDTGSGGNSF*TPLSGA
Trigger: AGCGCCAGATAAAGGAGTCCAAAAGGAATTCCCGCC...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp AACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACCACGCTCCACGTGGGTaGAATCTGGATAGACAAGCG +
Preference number: 4 (lower is better)
Translates to: NRGWEALHFRHSANPSGNHAPRG*NLDRQA
Trigger: CGCTTGTCTATCCAGATTCCACCCACGTGGAGCGTG...GTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCTCACATAGGCATCCATaGAGGGGCTGTCCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RNLWGEVTGTSLHPPCQCSHRHP*RGCPRL
Trigger: AAGCCTTGGACAGCCCCTCCATGGATGCCTATGTGA...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp TGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCGGCAAGCTTCTGTGTCTGTTTaGCACAAGTACACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CQCLMSPENKGRDTGSRQASVSV*HKYTRG
Trigger: GCCCCTGGTGTACTTGTGCCAAACAGACACAGAAGC...TTGCCGGCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACGACGGCCATATTTCATaGAGATCTCATATTGATCGC +
Preference number: 4 (lower is better)
Translates to: GLRHCVWQRLCRTAAGRHDGHIS*RSHIDR
Trigger: GCGATCAATATGAGATCTGCATGAAATATGGCCGTC...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAAAGGGGCTCAGGCTGTTaGACCAGAGGCTTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: AAGRHFISGILPTPVVTKRGSGC*TRGLGV
Trigger: AACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCT...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCTTGAGTCTGTTGCATTaGGAACAGAGCCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RNLWGEVTGTSLHPPCQCLSLLH*EQSLWR
Trigger: CCTCCACAGGCTCTGTTCCCAATGCAACAGACTCAA...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAACGCAACTTCCAGCGCTaGCGGCCATATTTCATGCAG +
Preference number: 4 (lower is better)
Translates to: AAGRHFISGILPTPVVTKRNFQR*RPYFMQ
Trigger: CTGCATGAAATATGGCCGTCAGCGCTGGAAGTTGCG...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAATCCTCTAGCTGTCGATaGGCAGACTGTCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AAGRHFISGILPTPVVTKSSSCR*ADCPSS
Trigger: GGAGGAAGGACAGTCTGCTCATCGACAGCTAGAGGA...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp CACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGCTGTGCCAGAGAGCTaGGGGCTTGATGAATCATCT +
Preference number: 4 (lower is better)
Translates to: HCVWQRLCRTAAGRHFISAVPES*GLDESS
Trigger: AGATGATTCATCAAGCCCGCAGCTCTCTGGCACAGC...TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp CACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGGCTGAACACCCTGTaGTTAGAGACTGGCCATTTG +
Preference number: 4 (lower is better)
Translates to: HCVWQRLCRTAAGRHFISGLNTL*LETGHL
Trigger: CAAATGGCCAGTCTCTAAGCACAGGGTGTTCAGCCC...TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp GTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCAAGTCCCTCTGTACACTaGTCCCAAAAGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VCGKDCAEPRLGGTSFQASPSVH*SQKVRK
Trigger: CTTCCTGACCTTTTGGGACCAGTGTACAGAGGGACT...TGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTACTTTGTTGTTGCCGTaGACCAGCAGGGAGCTAAGA +
Preference number: 4 (lower is better)
Translates to: LHPPCQCLMSPENKGRDTTLLLP*TSRELR
Trigger: TCTTAGCTCCCTGCTGGTCCACGGCAACAACAAAGT...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAAGACTGTAGAAGCAGCTaGAGGCTGGTCATCCTTGTC +
Preference number: 4 (lower is better)
Translates to: AAGRHFISGILPTPVVTKDCRSS*RLVILV
Trigger: GACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTC...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp GACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTGCTTGTGAGGGGTTTTaGACCAGAGGAAGCAAGACT +
Preference number: 4 (lower is better)
Translates to: DTVCGKDCAEPRLGGTSFACEGF*TRGSKT
Trigger: AGTCTTGCTTCCTCTGGTTCAAAACCCCTCACAAGC...AAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp TGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCGGCAACCGCTGGACACAGTATaGTTCATACAACTCGTCAAT +
Preference number: 4 (lower is better)
Translates to: CQCLMSPENKGRDTGSRQPLDTV*FIQLVN
Trigger: ATTGACGAGTTGTATGAAGCATACTGTGTCCAGCGG...TTGCCGGCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp GACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTTCACTGTCCCACACCTaGTTGCCACTACTCTCTATC +
Preference number: 4 (lower is better)
Translates to: DTVCGKDCAEPRLGGTSFSLSHT*LPLLSI
Trigger: GATAGAGAGTAGTGGCAAGCAGGTGTGGGACAGTGA...AAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp CACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGAAGCAGCTGAAGGCTaGTCATCCTTGTCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: HCVWQRLCRTAAGRHFISEAAEG*SSLSKG
Trigger: TCCCTTTGACAAGGATGACCAGCCTTCAGCTGCTTC...TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp GTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCAAAGGGGCGGAGTCTGTaGTTTTGTGAACCAAGTCTA +
Preference number: 4 (lower is better)
Translates to: VCGKDCAEPRLGGTSFQAKGRSL*FCEPSL
Trigger: TAGACTTGGTTCACAAAACCACAGACTCCGCCCCTT...TGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp TGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGTTCAGCACAACGGCCTaGTCATCAGAGTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: WQRLCRTAAGRHFISGILFSTTA*SSEFRF
Trigger: GAACCTGAACTCTGATGACCAGGCCGTTGTGCTGAA...CAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp CACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCATGGTGCCAAGATCATTaGTATCCACAGCCACAACCT +
Preference number: 4 (lower is better)
Translates to: HCVWQRLCRTAAGRHFISWCQDH*YPQPQP
Trigger: AGGTTGTGGCTGTGGATATCAATGATCTTGGCACCA...TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp TGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGGAGTCTGTGGTTTTGTaGACCAAGTCTAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: WQRLCRTAAGRHFISGILESVVL*TKSSCV
Trigger: GACACAGCTAGACTTGGTTCACAAAACCACAGACTC...CAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR GCA 90 bp AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCTCAATGGACTTGACTTaGTTGTCCAAGTCATACAGG +
Preference number: 4 (lower is better)
Translates to: RNLWGEVTGTSLHPPCQCSMDLT*LSKSYR
Trigger: CCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGA...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATTCAATCTTACTGGCATaGAATTCCAGTCGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: FVGRGDWNQPSPSLPVPDSILLA*NSSRRR
Trigger: TCTTCGACGACTGGAATTCCATGCCAGTAAGATTGA...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAAAACTGTACCACTTCCTaGGCAGATGTGGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: AAGRHFISGILPTPVVTKNCTTS*ADVAEF
Trigger: GAACTCTGCCACATCTGCCCAGGAAGTGGTACAGTT...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR TCA 90 bp ACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGCGTTCAATGGACTTaGCTTGCTTGTCCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: TLCVAKTVQNRGWEALHFSVQWT*LACPSH
Trigger: ATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCT...GAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CCA 90 bp ACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCTTATGTTCTGAATGTTaGGGTTCAGGGGCACTAGAT +
Preference number: 4 (lower is better)
Translates to: TLCVAKTVQNRGWEALHFLCSEC*GSGALD
Trigger: ATCTAGTGCCCCTGAACCCCAACATTCAGAACATAA...GAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp CTCCTGGGCCCGCGCTCGTGGCTGCCGAGGACGCCTGCGAAGGACTaGCTCCTACTGACCCGGGCGCTGAGCAGGCGGCGCTGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: LLGPRSWLPRTPAKD*LLLTRALSRRRCGR
Trigger: GCGGCCGCAGCGCCGCCTGCTCAGCGCCCGGGTCAGTAGGAGCCAGTCCTTCGCAGGCGTCCTCGGCAGCCACGAGCGCGGGCCCAGGAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp GACAGTGAAGCTCCTGGGCCCGCGCTCGTGGCTGCCGAGGACGCCTaGGAAGGACTGGCTCCTACTGACCCGGGCGCTGAGCAGGCGGCG +
Preference number: 5 (lower is better)
Translates to: DSEAPGPALVAAEDA*EGLAPTDPGAEQAA
Trigger: CGCCGCCTGCTCAGCGCCCGGGTCAGTAGGAGCCAGTCCTTCGCAGGCGTCCTCGGCAGCCACGAGCGCGGGCCCAGGAGCTTCACTGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp GGCCCTGGTGGGCTGAAGACAGTGAAGCTCCTGGGCCCGCGCTCGTaGCTGCCGAGGACGCCTGCGAAGGACTGGCTCCTACTGACCCGG +
Preference number: 5 (lower is better)
Translates to: GPGGLKTVKLLGPRS*LPRTPAKDWLLLTR
Trigger: CCGGGTCAGTAGGAGCCAGTCCTTCGCAGGCGTCCTCGGCAGCCACGAGCGCGGGCCCAGGAGCTTCACTGTCTTCAGCCCACCAGGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp GCCTCGAGTGGCCTCGGCCAGGCTGTCTCGGGCCTCTCGACTCCCTaGGGACCCAGTGCTATAGGCGCGGACCATGTTGTAGGCACCATC +
Preference number: 5 (lower is better)
Translates to: ASSGLGQAVSGLSTP*GPSAIGADHVVGTI
Trigger: GATGGTGCCTACAACATGGTCCGCGCCTATAGCACTGGGTCCCCAGGGAGTCGAGAGGCCCGAGACAGCCTGGCCGAGGCCACTCGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp AATACACGCGCTTCCCGCAGCAGCCGTTCCAGGGCCCAGGCCTCCTaGCAGCGCAGGGGTCCAAATGTGCCCAGTTTCAGCAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: NTRASRSSRSRAQAS*QRRGPNVPSFSRRR
Trigger: CCGCCTCCTGCTGAAACTGGGCACATTTGGACCCCTGCGCTGCCAGGAGGCCTGGGCCCTGGAACGGCTGCTGCGGGAAGCGCGTGTATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTCTGGCTGCGGCACCTaGGGAGCTGGATGGGCCACA +
Preference number: 5 (lower is better)
Translates to: GLRHCVWQRLCRTAAGRHSGCGT*GAGWAT
Trigger: TGTGGCCCATCCAGCTCCCAAGGTGCCGCAGCCAGA...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp GCCTCGGCTAAGCCTGGCTGGCGCAGGGAAAGACGGGCACCGTACTaGCTGCAGAAGGTGAGGAGCACCCGCTCCACAGAGCAGATGAAG +
Preference number: 5 (lower is better)
Translates to: ASAKPGWRRERRAPY*LQKVRSTRSTEQMK
Trigger: CTTCATCTGCTCTGTGGAGCGGGTGCTCCTCACCTTCTGCAGCCAGTACGGTGCCCGTCTTTCCCTGCGCCAGCCAGGCTTAGCCGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp TCTCCAGAAGACACATGCTCTCTGTATACTCTCGATGGCCTCGAGTaGCCTCGGCCAGGCTGTCTCGGGCCTCTCGACTCCCTGGGGACC +
Preference number: 5 (lower is better)
Translates to: SPEDTCSLYTLDGLE*PRPGCLGPLDSLGT
Trigger: GGTCCCCAGGGAGTCGAGAGGCCCGAGACAGCCTGGCCGAGGCCACTCGAGGCCATCGAGAGTATACAGAGAGCATGTGTCTTCTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp GATGTGGCAGAGTTCCCCCATAGCTTGCTGCGTTCACACACTTCCTaGAATACACGCGCTTCCCGCAGCAGCCGTTCCAGGGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: DVAEFPHSLLRSHTS*NTRASRSSRSRAQA
Trigger: GGCCTGGGCCCTGGAACGGCTGCTGCGGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp GCCAGGCATCCGGCCACTCGAGTCTGCACGTCCCCATCTTCCAGCTaGTCCAGGAAGCACAAGAGAGCCCTTTCCCGGAAGACAGGACCA +
Preference number: 5 (lower is better)
Translates to: ARHPATRVCTSPSSS*SRKHKRALSRKTGP
Trigger: TGGTCCTGTCTTCCGGGAAAGGGCTCTCTTGTGCTTCCTGGACCAGCTGGAAGATGGGGACGTGCAGACTCGAGTGGCCGGATGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCCAGGGGCTCAGGCTGTaGCACCAGAGGCTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: LRHCVWQRLCRTAAGRHFQGLRL*HQRLGS
Trigger: ACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCTG...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCCTTCGGAAGGCAACTaGGACAGGCAGGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: PPCQCLMSPENKGRDTGSPSEGN*DRQGLR
Trigger: CCTGAGCCCCTGCCTGTCCAAGTTGCCTTCCGAAGG...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATCAACCTCTGGGCTGCTaGTGTGCCTGTCCCCGGGAC +
Preference number: 5 (lower is better)
Translates to: FVGRGDWNQPSPSLPVPDQPLGC*CACPRD
Trigger: GTCCCGGGGACAGGCACACAAGCAGCCCAGAGGTTG...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp TCTGGCCTTCGGAAGGCAACTTGGACAGGCAGGGGCTCAGGCTGTTaGACCAGAGGCTTGGGAGTTGAGTGTCGAGCTGTGCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: SGLRKATWTGRGSGC*TRGLGVECRAVPES
Trigger: GCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCTGCCTGTCCAAGTTGCCTTCCGAAGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp GTGATGCTAAGACTGGAAGCCCGGCTTCGAGTCAGGCCTTGTCTCTaGATGAGCAGACTCTCCAGCCGAGTCACCTCCTGCTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VMLRLEARLRVRPCL*MSRLSSRVTSCSRP
Trigger: GGGCCTGGAGCAGGAGGTGACTCGGCTGGAGAGTCTGCTCATGCAGAGACAAGGCCTGACTCGAAGCCGGGCTTCCAGTCTTAGCATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp GGAGCCTTGATACAGCCCAAAGCCAGGCATCCGGCCACTCGAGTCTaGACGTCCCCATCTTCCAGCTGGTCCAGGAAGCACAAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: GALIQPKARHPATRV*TSPSSSWSRKHKRA
Trigger: GGCTCTCTTGTGCTTCCTGGACCAGCTGGAAGATGGGGACGTGCAGACTCGAGTGGCCGGATGCCTGGCTTTGGGCTGTATCAAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp AGGCAACTTGGACAGGCAGGGGCTCAGGCTGTTGCACCAGAGGCTTaGGAGTTGAGTGTCGAGCTGTGCCAGAGAGCTGCGGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: RQLGQAGAQAVAPEA*ELSVELCQRAAGLM
Trigger: CATCAAGCCCGCAGCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCTGCCTGTCCAAGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp CCGGCTGTAAGGGGCATGCCCATTGACCAGGGATGGGGTCATGGCTaGCTCTTCATCCATGGAACCAGACGTGAGGCTCTCTGGCCTTCG +
Preference number: 5 (lower is better)
Translates to: PAVRGMPIDQGWGHG*LFIHGTRREALWPS
Trigger: CGAAGGCCAGAGAGCCTCACGTCTGGTTCCATGGATGAAGAGCCAGCCATGACCCCATCCCTGGTCAATGGGCATGCCCCTTACAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp GTGGGGGCGGGGCCAGTTGTACTGAGGGCGGGACTTGTGGCAGAATaGCCATTGTTGAGGACAGGCAGAACACTACTGACACGCTCCACG +
Preference number: 5 (lower is better)
Translates to: VGAGPVVLRAGLVAE*PLLRTGRTLLTRST
Trigger: CGTGGAGCGTGTCAGTAGTGTTCTGCCTGTCCTCAACAATGGCCATTCTGCCACAAGTCCCGCCCTCAGTACAACTGGCCCCGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp ACCCGCTCCACAGAGCAGATGAAGGGGCTGAGTCCCTCTGTACACTaGTCCCAAAAGGTCAGGAAGCCGGGCCGAGAGGCGGAGAACTGT +
Preference number: 5 (lower is better)
Translates to: TRSTEQMKGLSPSVH*SQKVRKPGREAENC
Trigger: ACAGTTCTCCGCCTCTCGGCCCGGCTTCCTGACCTTTTGGGACCAGTGTACAGAGGGACTCAGCCCCTTCATCTGCTCTGTGGAGCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATCTCAGGGACTGGGGCTaGAGCAACTGCGGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: FVGRGDWNQPSPSLPVPDLRDWG*SNCGQV
Trigger: AACCTGGCCGCAGTTGCTCAAGCCCCAGTCCCTGAG...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACACAGCAGCCATGACTTaGTTGTTGCCGTGGACCAGC +
Preference number: 5 (lower is better)
Translates to: GLRHCVWQRLCRTAAGRHTAAMT*LLPWTS
Trigger: GCTGGTCCACGGCAACAACAAAGTCATGGCTGCTGT...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp GGTCCCAAGAGCTTCTTCAAGCCTTCTGTCCCCAGCTCCTCCCGTTaGCTCAGGGACTGGGGCTTGAGCAACTGCGGCCAGGTTATGTTC +
Preference number: 5 (lower is better)
Translates to: GPKSFFKPSVPSSSR*LRDWGLSNCGQVMF
Trigger: GAACATAACCTGGCCGCAGTTGCTCAAGCCCCAGTCCCTGAGGCAACGGGAGGAGCTGGGGACAGAAGGCTTGAAGAAGCTCTTGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp CGTCAGTCCCCGCTTAAGAGCAGTGTACACCAGGTCCAGCCTCTCTaGCTGCGGCACCTTGGGAGCTGGATGGGCCACAGAAAACATCCT +
Preference number: 5 (lower is better)
Translates to: RQSPLKSSVHQVQPL*LRHLGSWMGHRKHP
Trigger: AGGATGTTTTCTGTGGCCCATCCAGCTCCCAAGGTGCCGCAGCCAGAGAGGCTGGACCTGGTGTACACTGCTCTTAAGCGGGGACTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp GGTCATGGCTGGCTCTTCATCCATGGAACCAGACGTGAGGCTCTCTaGCCTTCGGAAGGCAACTTGGACAGGCAGGGGCTCAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GHGWLFIHGTRREAL*PSEGNLDRQGLRLL
Trigger: CAACAGCCTGAGCCCCTGCCTGTCCAAGTTGCCTTCCGAAGGCCAGAGAGCCTCACGTCTGGTTCCATGGATGAAGAGCCAGCCATGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp GTGGCTGAGAGTCCGGCTGTAAGGGGCATGCCCATTGACCAGGGATaGGGTCATGGCTGGCTCTTCATCCATGGAACCAGACGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: VAESPAVRGMPIDQG*GHGWLFIHGTRREA
Trigger: AGCCTCACGTCTGGTTCCATGGATGAAGAGCCAGCCATGACCCCATCCCTGGTCAATGGGCATGCCCCTTACAGCCGGACTCTCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp AGCCGGGCCGAGAGGCGGAGAACTGTACCACTTCCTGGGCAGATGTaGCAGAGTTCCCCCATAGCTTGCTGCGTTCACACACTTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SRAERRRTVPLPGQM*QSSPIACCVHTLPG
Trigger: TCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTACAGTTCTCCGCCTCTCGGCCCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp AAGGTCAGGAAGCCGGGCCGAGAGGCGGAGAACTGTACCACTTCCTaGGCAGATGTGGCAGAGTTCCCCCATAGCTTGCTGCGTTCACAC +
Preference number: 5 (lower is better)
Translates to: KVRKPGREAENCTTS*ADVAEFPHSLLRSH
Trigger: GTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTACAGTTCTCCGCCTCTCGGCCCGGCTTCCTGACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGCTGTCCCACACCTGCTaGCCACTACTCTCTATCCGG +
Preference number: 5 (lower is better)
Translates to: AEPRLGGTSFQAFCQPQWLSHTC*PLLSIR
Trigger: CCGGATAGAGAGTAGTGGCAAGCAGGTGTGGGACAG...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACAGCTTCTGTGTCTGTTaGGCACAAGTACACCAGGGG +
Preference number: 5 (lower is better)
Translates to: GLRHCVWQRLCRTAAGRHSFCVC*AQVHQG
Trigger: CCCCTGGTGTACTTGTGCCAAACAGACACAGAAGCT...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 90 bp GGAATCTGGATAGACAAGCGGGCTAGGCCCTGGGATTGGGCTTTGTaGGTCCACAGCTTCCACGGCCTCAGTCAAGGCAGCATCCACGCT +
Preference number: 5 (lower is better)
Translates to: GIWIDKRARPWDWAL*VHSFHGLSQGSIHA
Trigger: AGCGTGGATGCTGCCTTGACTGAGGCCGTGGAAGCTGTGGACTCACAAAGCCCAATCCCAGGGCCTAGCCCGCTTGTCTATCCAGATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp TGGGTGACTACAGGGCAGAGGTTCAGTGCCTGGGCCGGTGGATTCTaGAGAGGAGCTGGAGATTATAGCCACGTCTGTAGAAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: WVTTGQRFSAWAGGF*RGAGDYSHVCRRGG
Trigger: CCCTCCCCTTCTACAGACGTGGCTATAATCTCCAGCTCCTCTGCAGAATCCACCGGCCCAGGCACTGAACCTCTGCCCTGTAGTCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp GTACCACTTCCTGGGCAGATGTGGCAGAGTTCCCCCATAGCTTGCTaGGTTCACACACTTCCTGGAATACACGCGCTTCCCGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: VPLPGQMWQSSPIAC*VHTLPGIHALPAAA
Trigger: GGCTGCTGCGGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp TACATAACTCCAGAATTGGAAGATGGTGAACTGCTCCCCCGGGCCTaGTTGGGGCCTCCTGGGCAGCTTCTGTCCCAGGGCATCTTCCAG +
Preference number: 5 (lower is better)
Translates to: YITPELEDGELLPRA*LGPPGQLLSQGIFQ
Trigger: CTGGAAGATGCCCTGGGACAGAAGCTGCCCAGGAGGCCCCAACCAGGCCCGGGGGAGCAGTTCACCATCTTCCAATTCTGGAGTTATGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp TGCAGGCTCTGCCGGGCGGCTTCCCTCACAGCTTCTGTGTCTGTTTaGCACAAGTACACCAGGGGCTCAATGCCCTCAGGAGCCTTGATA +
Preference number: 5 (lower is better)
Translates to: CRLCRAASLTASVSV*HKYTRGSMPSGALI
Trigger: TATCAAGGCTCCTGAGGGCATTGAGCCCCTGGTGTACTTGTGCCAAACAGACACAGAAGCTGTGAGGGAAGCCGCCCGGCAGAGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCTGTTGCACCAGAGGCTaGGGAGTTGAGTGTCGAGCT +
Preference number: 5 (lower is better)
Translates to: PPCQCLMSPENKGRDTGSCCTRG*GVECRA
Trigger: AGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACA...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp TGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCGGCAAGCAGCCATGACTTTGTaGTTGCCGTGGACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: CQCLMSPENKGRDTGSRQAAMTL*LPWTSR
Trigger: CCTGCTGGTCCACGGCAACAACAAAGTCATGGCTGC...TTGCCGGCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATATGCCCTCAGGAGCCTaGATACAGCCCAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: FVGRGDWNQPSPSLPVPDMPSGA*IQPKAR
Trigger: CCTGGCTTTGGGCTGTATCAAGGCTCCTGAGGGCAT...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 90 bp AGAGCCCTTTCCCGGAAGACAGGACCAAGTGACAGGCTCCGAAGCTaGGTGCTGACAGCAGCCATGACTTTGTTGTTGCCGTGGACCAGC +
Preference number: 5 (lower is better)
Translates to: RALSRKTGPSDRLRS*VLTAAMTLLLPWTS
Trigger: GCTGGTCCACGGCAACAACAAAGTCATGGCTGCTGTCAGCACTCAGCTTCGGAGCCTGTCACTTGGTCCTGTCTTCCGGGAAAGGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp CCAAATGTGCCCAGTTTCAGCAGGAGGCGGCTGCAGTGGTACAGGTaGTGGACCAAGGTAGCATCCAGGGCTGAACACCCTGTGCTTAGA +
Preference number: 5 (lower is better)
Translates to: PNVPSFSRRRLQWYR*WTKVASRAEHPVLR
Trigger: TCTAAGCACAGGGTGTTCAGCCCTGGATGCTACCTTGGTCCAGCACCTGTACCACTGCAGCCGCCTCCTGCTGAAACTGGGCACATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp CATCTTGGCTTCTTGAGTGGGACTAGTGGTACTGTGGCCGGAGCTTaGAGTAGTGCAGGTGGGACTTACAGTGGTATGGGTGGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: HLGFLSGTSGTVAGA*SSAGGTYSGMGGAR
Trigger: CCGAGCCCCACCCATACCACTGTAAGTCCCACCTGCACTACTCCAAGCTCCGGCCACAGTACCACTAGTCCCACTCAAGAAGCCAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp AATGTGCCCAGTTTCAGCAGGAGGCGGCTGCAGTGGTACAGGTGCTaGACCAAGGTAGCATCCAGGGCTGAACACCCTGTGCTTAGAGAC +
Preference number: 5 (lower is better)
Translates to: NVPSFSRRRLQWYRC*TKVASRAEHPVLRD
Trigger: GTCTCTAAGCACAGGGTGTTCAGCCCTGGATGCTACCTTGGTCCAGCACCTGTACCACTGCAGCCGCCTCCTGCTGAAACTGGGCACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGCGGCAAACAGGTCCTaGGTCTCACAGGAGACACTG +
Preference number: 5 (lower is better)
Translates to: LHPPCQCLMSPENKGRDTAANRS*VSQETL
Trigger: CAGTGTCTCCTGTGAGACCAAGGACCTGTTTGCCGC...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp TGCACCAGAGGCTTGGGAGTTGAGTGTCGAGCTGTGCCAGAGAGCTaGGGGCTTGATGAATCATCTGACGATTCAGAGGACAGGGACCAG +
Preference number: 5 (lower is better)
Translates to: CTRGLGVECRAVPES*GLDESSDDSEDRDQ
Trigger: CTGGTCCCTGTCCTCTGAATCGTCAGATGATTCATCAAGCCCGCAGCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp GCTCAGGCTGTTGCACCAGAGGCTTGGGAGTTGAGTGTCGAGCTGTaGCAGAGAGCTGCGGGCTTGATGAATCATCTGACGATTCAGAGG +
Preference number: 5 (lower is better)
Translates to: AQAVAPEAWELSVEL*QRAAGLMNHLTIQR
Trigger: CCTCTGAATCGTCAGATGATTCATCAAGCCCGCAGCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACAGCCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp ACTGTACCACTTCCTGGGCAGATGTGGCAGAGTTCCCCCATAGCTTaGTGCGTTCACACACTTCCTGGAATACACGCGCTTCCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: TVPLPGQMWQSSPIA*CVHTLPGIHALPAA
Trigger: TGCTGCGGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATGTTGAGTCTGTTGCATaGGGAACAGAGCCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: FVGRGDWNQPSPSLPVPDVESVA*GTEPVE
Trigger: CTCCACAGGCTCTGTTCCCAATGCAACAGACTCAAC...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTCATCTTCATCATCATaGAGGAAGCTGAAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GLRHCVWQRLCRTAAGRHSSSSS*RKLKLS
Trigger: GGAGAGCTTCAGCTTCCTCAATGATGATGAAGATGA...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTCCCCGGGACCATCGTaGTCTTCATCTTCATCATCA +
Preference number: 5 (lower is better)
Translates to: AEPRLGGTSFQAFCQPQWSPGPS*SSSSSS
Trigger: TGATGATGAAGATGAAGACAACGATGGTCCCGGGGA...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 90 bp GGGACCCAGTGCTATAGGCGCGGACCATGTTGTAGGCACCATCCCTaGGACGCCGCTGGACACAGTATGCTTCATACAACTCGTCAATCT +
Preference number: 5 (lower is better)
Translates to: GTQCYRRGPCCRHHP*DAAGHSMLHTTRQS
Trigger: AGATTGACGAGTTGTATGAAGCATACTGTGTCCAGCGGCGTCTCAGGGATGGTGCCTACAACATGGTCCGCGCCTATAGCACTGGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 90 bp GTCCAGGAAGCACAAGAGAGCCCTTTCCCGGAAGACAGGACCAAGTaGCAGGCTCCGAAGCTGAGTGCTGACAGCAGCCATGACTTTGTT +
Preference number: 5 (lower is better)
Translates to: VQEAQESPFPEDRTK*QAPKLSADSSHDFV
Trigger: AACAAAGTCATGGCTGCTGTCAGCACTCAGCTTCGGAGCCTGTCACTTGGTCCTGTCTTCCGGGAAAGGGCTCTCTTGTGCTTCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp AGGCGCCCCTCCGGTGCTAACCTTAGGGCTTTCAGCACAACGGCCTaGTCATCAGAGTTCAGGTTCTGTACTAGTAACACCTCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: RRPSGANLRAFSTTA*SSEFRFCTSNTSSA
Trigger: TGCAGAGGAGGTGTTACTAGTACAGAACCTGAACTCTGATGACCAGGCCGTTGTGCTGAAAGCCCTAAGGTTAGCACCGGAGGGGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp GTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCAAGGCGGGAATTCCTTTaGGACTCCTTTATCTGGCGC +
Preference number: 5 (lower is better)
Translates to: VCGKDCAEPRLGGTSFQARREFL*DSFIWR
Trigger: GCGCCAGATAAAGGAGTCCAAAAGGAATTCCCGCCT...TGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATCATGCAGATCTCATATaGATCGCCCACACACAGCCT +
Preference number: 5 (lower is better)
Translates to: FVGRGDWNQPSPSLPVPDHADLI*IAHTQP
Trigger: AGGCTGTGTGTGGGCGATCAATATGAGATCTGCATG...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCGTGACTGTGGAAGCTTaGTTGACTGTAGAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PPCQCLMSPENKGRDTGSVTVEA*LTVEAA
Trigger: AGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCAC...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATGCAGAATGGCCATTGTaGAGGACAGGCAGAACACTA +
Preference number: 5 (lower is better)
Translates to: FVGRGDWNQPSPSLPVPDAEWPL*RTGRTL
Trigger: TAGTGTTCTGCCTGTCCTCAACAATGGCCATTCTGC...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp ACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCCCTGGGTTGAGTCTGTaGCATTGGGAACAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: TLCVAKTVQNRGWEALHFPGLSL*HWEQSL
Trigger: CAGGCTCTGTTCCCAATGCAACAGACTCAACCCAGG...GAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp CACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGCTTCGAGTCAGGCCTaGTCTCTGCATGAGCAGACT +
Preference number: 5 (lower is better)
Translates to: HCVWQRLCRTAAGRHFISASSQA*SLHEQT
Trigger: AGTCTGCTCATGCAGAGACAAGGCCTGACTCGAAGC...TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp GGCCATTTGATGAGTCTAGTCTGTCCTCTGCCACAACCTCTGGGCTaGTTGTGTGCCTGTCCCCGGGACCATCGTTGTCTTCATCTTCAT +
Preference number: 5 (lower is better)
Translates to: GHLMSLVCPLPQPLG*LCACPRDHRCLHLH
Trigger: ATGAAGATGAAGACAACGATGGTCCCGGGGACAGGCACACAAGCAGCCCAGAGGTTGTGGCAGAGGACAGACTAGACTCATCAAATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp AACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACCCACAGAAAACATCCTaGACACTCGGGAGAGCACTA +
Preference number: 5 (lower is better)
Translates to: NRGWEALHFRHSANPSGNPQKTS*TLGRAL
Trigger: TAGTGCTCTCCCGAGTGTCAAGGATGTTTTCTGTGG...GTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATGGACTTGACTTGCTaGTCCAAGTCATACAGGAAG +
Preference number: 5 (lower is better)
Translates to: LRHCVWQRLCRTAAGRHFMDLTC*SKSYRK
Trigger: CTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCAT...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp GAAGCCAGCCAGCCCTTTCATCCGGAGATGAAACTCGCCCAACTGTaGCTCCAGCTCATTCTCCAGAAGACACATGCTCTCTGTATACTC +
Preference number: 5 (lower is better)
Translates to: EASQPFHPEMKLAQL*LQLILQKTHALCIL
Trigger: GAGTATACAGAGAGCATGTGTCTTCTGGAGAATGAGCTGGAGGCACAGTTGGGCGAGTTTCATCTCCGGATGAAAGGGCTGGCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp GATGAGTCTAGTCTGTCCTCTGCCACAACCTCTGGGCTGCTTGTGTaGCTGTCCCCGGGACCATCGTTGTCTTCATCTTCATCATCATTG +
Preference number: 5 (lower is better)
Translates to: DESSLSSATTSGLLV*LSPGPSLSSSSSSL
Trigger: CAATGATGATGAAGATGAAGACAACGATGGTCCCGGGGACAGGCACACAAGCAGCCCAGAGGTTGTGGCAGAGGACAGACTAGACTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp TCTTCATCTTCATCATCATTGAGGAAGCTGAAGCTCTCCAGGGCATaGTCCACAGTGATGCTAAGACTGGAAGCCCGGCTTCGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: SSSSSSLRKLKLSRA*STVMLRLEARLRVR
Trigger: CCTGACTCGAAGCCGGGCTTCCAGTCTTAGCATCACTGTGGAGCATGCCCTGGAGAGCTTCAGCTTCCTCAATGATGATGAAGATGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTAAGCGTTCAATGGACTaGACTTGCTTGTCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: LHPPCQCLMSPENKGRDTKRSMD*TCLSKS
Trigger: TGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTT...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCACTTCTAGGCTTAGCTaGATGGTGCCAAGATCATTG +
Preference number: 5 (lower is better)
Translates to: AKTVQNRGWEALHFRHSATSRLS*MVPRSL
Trigger: CAATGATCTTGGCACCATCAAGCTAAGCCTAGAAGT...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAAGAAGGCTGGTCATCCTaGTCAAAGGGACTCCATATG +
Preference number: 5 (lower is better)
Translates to: AAGRHFISGILPTPVVTKEGWSS*SKGLHM
Trigger: CATATGGAGTCCCTTTGACAAGGATGACCAGCCTTC...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp GACCATGTTGTAGGCACCATCCCTGAGACGCCGCTGGACACAGTATaGTTCATACAACTCGTCAATCTTACTGGCATGGAATTCCAGTCG +
Preference number: 5 (lower is better)
Translates to: DHVVGTIPETPLDTV*FIQLVNLTGMEFQS
Trigger: CGACTGGAATTCCATGCCAGTAAGATTGACGAGTTGTATGAAGCATACTGTGTCCAGCGGCGTCTCAGGGATGGTGCCTACAACATGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp GACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTTATGTGGAAAATCGCTaGGTGACTGTGGAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: DTVCGKDCAEPRLGGTSFYVENR*VTVEAL
Trigger: CAAAGCTTCCACAGTCACCAAGCGATTTTCCACATA...AAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp GACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTTTAGAGACTGGCCATTaGATGAGTCTAGTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: DTVCGKDCAEPRLGGTSFLETGH*MSLVCP
Trigger: AGGACAGACTAGACTCATCAAATGGCCAGTCTCTAA...AAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS-3UTR CAA 90 bp GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCTACATAACTCCAGAATaGGAAGATGGTGAACTGCTC +
Preference number: 5 (lower is better)
Translates to: AKTVQNRGWEALHFRHSAYITPE*EDGELL
Trigger: GAGCAGTTCACCATCTTCCAATTCTGGAGTTATGTA...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 90 bp TACTGGCATGGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGACTTaGCTTGCTTGTCCAAGTCATACAGGAAGCCTAGGCGGGAATTCC +
Preference number: 5 (lower is better)
Translates to: YWHGIPVVEESVQWT*LACPSHTGSLGGNS
Trigger: GGAATTCCCGCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGAATTCCATGCCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 90 bp GCATGGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGACTTGACTTaGTTGTCCAAGTCATACAGGAAGCCTAGGCGGGAATTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: AWNSSRRRKRSMDLT*LSKSYRKPRREFLL
Trigger: CAAAAGGAATTCCCGCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGAATTCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 90 bp TTGGTGACTGTGGAAGCTTTGTTGACTGTAGAAGCAGCTGAAGGCTaGTCATCCTTGTCAAAGGGACTCCATATGACTTCTAGGCTTAGC +
Preference number: 5 (lower is better)
Translates to: LVTVEALLTVEAAEG*SSLSKGLHMTSRLS
Trigger: GCTAAGCCTAGAAGTCATATGGAGTCCCTTTGACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp CCGCGCTCGTGGCTGCCGAGGACGCCTGCGAAGGACTaGCTCCTACTGACCCGGGCGCTGAGCAGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: PRSWLPRTPAKD*LLLTRALSRRR
Trigger: GCGCCGCCTGCTCAGCGCCCGGGTCAGTAGGAGCCAGTCCTTCGCAGGCGTCCTCGGCAGCCACGAGCGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp GGCCTCGGCCAGGCTGTCTCGGGCCTCTCGACTCCCTaGGGACCCAGTGCTATAGGCGCGGACCATGTTGTA +
Preference number: 6 (lower is better)
Translates to: GLGQAVSGLSTP*GPSAIGADHVV
Trigger: TACAACATGGTCCGCGCCTATAGCACTGGGTCCCCAGGGAGTCGAGAGGCCCGAGACAGCCTGGCCGAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp AAGCCTGGCTGGCGCAGGGAAAGACGGGCACCGTACTaGCTGCAGAAGGTGAGGAGCACCCGCTCCACAGAG +
Preference number: 6 (lower is better)
Translates to: KPGWRRERRAPY*LQKVRSTRSTE
Trigger: CTCTGTGGAGCGGGTGCTCCTCACCTTCTGCAGCCAGTACGGTGCCCGTCTTTCCCTGCGCCAGCCAGGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp GAGGGGAGGCTGGGTGACTACAGGGCAGAGGTTCAGTaGCTGGGCCGGTGGATTCTGCAGAGGAGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: EGRLGDYRAEVQ*LGRWILQRSWR
Trigger: TCTCCAGCTCCTCTGCAGAATCCACCGGCCCAGGCACTGAACCTCTGCCCTGTAGTCACCCAGCCTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 72 bp GCAGGGGCTCAGGCTGTTGCACCAGAGGCTTGGGAGTaGAGTGTCGAGCTGTGCCAGAGAGCTGCGGGCTTG +
Preference number: 6 (lower is better)
Translates to: AGAQAVAPEAWE*SVELCQRAAGL
Trigger: CAAGCCCGCAGCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 72 bp CAGGGCAGAGCATCCAGGGACTCCTCTAGCTGTCGATaGGCAGACTGTCCTTCCTCCCCGCACTGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: QGRASRDSSSCR*ADCPSSPHCCR
Trigger: CCTGCAGCAGTGCGGGGAGGAAGGACAGTCTGCTCATCGACAGCTAGAGGAGTCCCTGGATGCTCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp CCGCTTAAGAGCAGTGTACACCAGGTCCAGCCTCTCTaGCTGCGGCACCTTGGGAGCTGGATGGGCCACAGA +
Preference number: 6 (lower is better)
Translates to: PLKSSVHQVQPL*LRHLGSWMGHR
Trigger: TCTGTGGCCCATCCAGCTCCCAAGGTGCCGCAGCCAGAGAGGCTGGACCTGGTGTACACTGCTCTTAAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp GACACATGCTCTCTGTATACTCTCGATGGCCTCGAGTaGCCTCGGCCAGGCTGTCTCGGGCCTCTCGACTCC +
Preference number: 6 (lower is better)
Translates to: DTCSLYTLDGLE*PRPGCLGPLDS
Trigger: GGAGTCGAGAGGCCCGAGACAGCCTGGCCGAGGCCACTCGAGGCCATCGAGAGTATACAGAGAGCATGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp CAGCCACAACCTGGGGCAGGGCGGCAAACAGGTCCTTaGTCTCACAGGAGACACTGCCCACGACTACGTGGT +
Preference number: 6 (lower is better)
Translates to: QPQPGAGRQTGP*SHRRHCPRLRG
Trigger: ACCACGTAGTCGTGGGCAGTGTCTCCTGTGAGACCAAGGACCTGTTTGCCGCCCTGCCCCAGGTTGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp AGGAACTTCACACACACAGCCTCGGCTAAGCCTGGCTaGCGCAGGGAAAGACGGGCACCGTACTGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: RNFTHTASAKPG*RRERRAPYWLQ
Trigger: CTGCAGCCAGTACGGTGCCCGTCTTTCCCTGCGCCAGCCAGGCTTAGCCGAGGCTGTGTGTGTGAAGTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp CCGGCCACTCGAGTCTGCACGTCCCCATCTTCCAGCTaGTCCAGGAAGCACAAGAGAGCCCTTTCCCGGAAG +
Preference number: 6 (lower is better)
Translates to: PATRVCTSPSSS*SRKHKRALSRK
Trigger: CTTCCGGGAAAGGGCTCTCTTGTGCTTCCTGGACCAGCTGGAAGATGGGGACGTGCAGACTCGAGTGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp CGGAAGGCAACTTGGACAGGCAGGGGCTCAGGCTGTTaGACCAGAGGCTTGGGAGTTGAGTGTCGAGCTGTG +
Preference number: 6 (lower is better)
Translates to: RKATWTGRGSGC*TRGLGVECRAV
Trigger: CACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCTGCCTGTCCAAGTTGCCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp AAGCCGGGCCGAGAGGCGGAGAACTGTACCACTTCCTaGGCAGATGTGGCAGAGTTCCCCCATAGCTTGCTG +
Preference number: 6 (lower is better)
Translates to: KPGREAENCTTS*ADVAEFPHSLL
Trigger: CAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTACAGTTCTCCGCCTCTCGGCCCGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp ACAGAGCAGATGAAGGGGCTGAGTCCCTCTGTACACTaGTCCCAAAAGGTCAGGAAGCCGGGCCGAGAGGCG +
Preference number: 6 (lower is better)
Translates to: TEQMKGLSPSVH*SQKVRKPGREA
Trigger: CGCCTCTCGGCCCGGCTTCCTGACCTTTTGGGACCAGTGTACAGAGGGACTCAGCCCCTTCATCTGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 72 bp CTGCCGGGCGGCTTCCCTCACAGCTTCTGTGTCTGTTaGGCACAAGTACACCAGGGGCTCAATGCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: LPGGFPHSFCVC*AQVHQGLNALR
Trigger: CCTGAGGGCATTGAGCCCCTGGTGTACTTGTGCCAAACAGACACAGAAGCTGTGAGGGAAGCCGCCCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp GCGGGGCCAGTTGTACTGAGGGCGGGACTTGTGGCAGAATGGCCATaGTTGAGGACAGGCAGAACACTACTGACACGCTCCACGTGGGTG +
Preference number: 6 (lower is better)
Translates to: AGPVVLRAGLVAEWP*LRTGRTLLTRSTWV
Trigger: CACCCACGTGGAGCGTGTCAGTAGTGTTCTGCCTGTCCTCAACAATGGCCATTCTGCCACAAGTCCCGCCCTCAGTACAACTGGCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp GGGTCCCAAGAGCTTCTTCAAGCCTTCTGTCCCCAGCTCCTCCCGTaGCCTCAGGGACTGGGGCTTGAGCAACTGCGGCCAGGTTATGTT +
Preference number: 6 (lower is better)
Translates to: GSQELLQAFCPQLLP*PQGLGLEQLRPGYV
Trigger: AACATAACCTGGCCGCAGTTGCTCAAGCCCCAGTCCCTGAGGCAACGGGAGGAGCTGGGGACAGAAGGCTTGAAGAAGCTCTTGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp CTGCAGGCTCTGCCGGGCGGCTTCCCTCACAGCTTCTGTGTCTGTTaGGCACAAGTACACCAGGGGCTCAATGCCCTCAGGAGCCTTGAT +
Preference number: 6 (lower is better)
Translates to: LQALPGGFPHSFCVC*AQVHQGLNALRSLD
Trigger: ATCAAGGCTCCTGAGGGCATTGAGCCCCTGGTGTACTTGTGCCAAACAGACACAGAAGCTGTGAGGGAAGCCGCCCGGCAGAGCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 72 bp ATAGACAAGCGGGCTAGGCCCTGGGATTGGGCTTTGTaGGTCCACAGCTTCCACGGCCTCAGTCAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: IDKRARPWDWAL*VHSFHGLSQGS
Trigger: GCTGCCTTGACTGAGGCCGTGGAAGCTGTGGACTCACAAAGCCCAATCCCAGGGCCTAGCCCGCTTGTCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 72 bp ACAAGTACACCAGGGGCTCAATGCCCTCAGGAGCCTTaGTACAGCCCAAAGCCAGGCATCCGGCCACTCGAG +
Preference number: 6 (lower is better)
Translates to: TSTPGAQCPQEP*YSPKPGIRPLE
Trigger: CTCGAGTGGCCGGATGCCTGGCTTTGGGCTGTATCAAGGCTCCTGAGGGCATTGAGCCCCTGGTGTACTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp TTCTCCAGAAGACACATGCTCTCTGTATACTCTCGATaGCCTCGAGTGGCCTCGGCCAGGCTGTCTCGGGCC +
Preference number: 6 (lower is better)
Translates to: FSRRHMLSVYSR*PRVASARLSRA
Trigger: GGCCCGAGACAGCCTGGCCGAGGCCACTCGAGGCCATCGAGAGTATACAGAGAGCATGTGTCTTCTGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp TGGCTCTTCATCCATGGAACCAGACGTGAGGCTCTCTaGCCTTCGGAAGGCAACTTGGACAGGCAGGGGCTC +
Preference number: 6 (lower is better)
Translates to: WLFIHGTRREAL*PSEGNLDRQGL
Trigger: GAGCCCCTGCCTGTCCAAGTTGCCTTCCGAAGGCCAGAGAGCCTCACGTCTGGTTCCATGGATGAAGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp AGGGGCATGCCCATTGACCAGGGATGGGGTCATGGCTaGCTCTTCATCCATGGAACCAGACGTGAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: RGMPIDQGWGHG*LFIHGTRREAL
Trigger: GAGAGCCTCACGTCTGGTTCCATGGATGAAGAGCCAGCCATGACCCCATCCCTGGTCAATGGGCATGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp GAGTTCCCCCATAGCTTGCTGCGTTCACACACTTCCTaGAATACACGCGCTTCCCGCAGCAGCCGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: EFPHSLLRSHTS*NTRASRSSRSR
Trigger: CCTGGAACGGCTGCTGCGGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp TGCCGGGCGGCTTCCCTCACAGCTTCTGTGTCTGTTTaGCACAAGTACACCAGGGGCTCAATGCCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: CRAASLTASVSV*HKYTRGSMPSG
Trigger: TCCTGAGGGCATTGAGCCCCTGGTGTACTTGTGCCAAACAGACACAGAAGCTGTGAGGGAAGCCGCCCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 72 bp CACAAGTACACCAGGGGCTCAATGCCCTCAGGAGCCTaGATACAGCCCAAAGCCAGGCATCCGGCCACTCGA +
Preference number: 6 (lower is better)
Translates to: HKYTRGSMPSGA*IQPKARHPATR
Trigger: TCGAGTGGCCGGATGCCTGGCTTTGGGCTGTATCAAGGCTCCTGAGGGCATTGAGCCCCTGGTGTACTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp CTTGGACAGGCAGGGGCTCAGGCTGTTGCACCAGAGGCTTGGGAGTaGAGTGTCGAGCTGTGCCAGAGAGCTGCGGGCTTGATGAATCAT +
Preference number: 6 (lower is better)
Translates to: LGQAGAQAVAPEAWE*SVELCQRAAGLMNH
Trigger: ATGATTCATCAAGCCCGCAGCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCTGCCTGTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp GGGCCAGTTGTACTGAGGGCGGGACTTGTGGCAGAATGGCCATTGTaGAGGACAGGCAGAACACTACTGACACGCTCCACGTGGGTGGAA +
Preference number: 6 (lower is better)
Translates to: GPVVLRAGLVAEWPL*RTGRTLLTRSTWVE
Trigger: TTCCACCCACGTGGAGCGTGTCAGTAGTGTTCTGCCTGTCCTCAACAATGGCCATTCTGCCACAAGTCCCGCCCTCAGTACAACTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 72 bp CCAAGGCTTCTACATAACTCCAGAATTGGAAGATGGTaGACTGCTCCCCCGGGCCTGGTTGGGGCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PRLLHNSRIGRW*TAPPGLVGASW
Trigger: CCAGGAGGCCCCAACCAGGCCCGGGGGAGCAGTTCACCATCTTCCAATTCTGGAGTTATGTAGAAGCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp TTAAGAGCAGTGTACACCAGGTCCAGCCTCTCTGGCTaGGGCACCTTGGGAGCTGGATGGGCCACAGAAAAC +
Preference number: 6 (lower is better)
Translates to: LRAVYTRSSLSG*GTLGAGWATEN
Trigger: GTTTTCTGTGGCCCATCCAGCTCCCAAGGTGCCGCAGCCAGAGAGGCTGGACCTGGTGTACACTGCTCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp CCTGGGCAGATGTGGCAGAGTTCCCCCATAGCTTGCTaGGTTCACACACTTCCTGGAATACACGCGCTTCCC +
Preference number: 6 (lower is better)
Translates to: PGQMWQSSPIAC*VHTLPGIHALP
Trigger: GGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp GAGCCTGTGGAGGTGAGGGGAGAGGGCGTGGTTGTGTaGGCAGAACCTATAGTGGTGGAAGTTAGGCTTGGA +
Preference number: 6 (lower is better)
Translates to: EPVEVRGEGVVV*AEPIVVEVRLG
Trigger: TCCAAGCCTAACTTCCACCACTATAGGTTCTGCCCACACAACCACGCCCTCTCCCCTCACCTCCACAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp GGGCTCGGGGAGCTATGTGTAGGGCTTACAGTGGTGTaGGTGAGGCGTATAGTAGTATGGGTAGGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: GLGELCVGLTVV*VRRIVVWVGLG
Trigger: CCCAAGCCCTACCCATACTACTATACGCCTCACCCACACCACTGTAAGCCCTACACATAGCTCCCCGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp AACTGTACCACTTCCTGGGCAGATGTGGCAGAGTTCCCCCATAGCTaGCTGCGTTCACACACTTCCTGGAATACACGCGCTTCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: NCTTSWADVAEFPHS*LRSHTSWNTRASRS
Trigger: GCTGCGGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTACAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 72 bp TGGGGTACTGTGAGTAGGGCTTGGGGTAGCCTGGGTTaGGTCTGTTGCATTGGGAACAGAGCCTGTGGAGGT +
Preference number: 6 (lower is better)
Translates to: WGTVSRAWGSLG*VCCIGNRACGG
Trigger: ACCTCCACAGGCTCTGTTCCCAATGCAACAGACTCAACCCAGGCTACCCCAAGCCCTACTCACAGTACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 72 bp TCCCGGAAGACAGGACCAAGTGACAGGCTCCGAAGCTaGGTGCTGACAGCAGCCATGACTTTGTTGTTGCCG +
Preference number: 6 (lower is better)
Translates to: SRKTGPSDRLRS*VLTAAMTLLLP
Trigger: CGGCAACAACAAAGTCATGGCTGCTGTCAGCACTCAGCTTCGGAGCCTGTCACTTGGTCCTGTCTTCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp GTTGCACCAGAGGCTTGGGAGTTGAGTGTCGAGCTGTaGCAGAGAGCTGCGGGCTTGATGAATCATCTGACG +
Preference number: 6 (lower is better)
Translates to: VAPEAWELSVEL*QRAAGLMNHLT
Trigger: CGTCAGATGATTCATCAAGCCCGCAGCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp ACAGGGCAGAGGTTCAGTGCCTGGGCCGGTGGATTCTaGAGAGGAGCTGGAGATTATAGCCACGTCTGTAGA +
Preference number: 6 (lower is better)
Translates to: TGQRFSAWAGGF*RGAGDYSHVCR
Trigger: TCTACAGACGTGGCTATAATCTCCAGCTCCTCTGCAGAATCCACCGGCCCAGGCACTGAACCTCTGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp AGTCTGTCCTCTGCCACAACCTCTGGGCTGCTTGTGTaGCTGTCCCCGGGACCATCGTTGTCTTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: SLSSATTSGLLV*LSPGPSLSSSS
Trigger: TGAAGATGAAGACAACGATGGTCCCGGGGACAGGCACACAAGCAGCCCAGAGGTTGTGGCAGAGGACAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp GAGAGGCGGAGAACTGTACCACTTCCTGGGCAGATGTaGCAGAGTTCCCCCATAGCTTGCTGCGTTCACACA +
Preference number: 6 (lower is better)
Translates to: ERRRTVPLPGQM*QSSPIACCVHT
Trigger: TGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTACAGTTCTCCGCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp GAAGAAAGACGGTCTCTTCACTGTCCCACACCTGCTTaGCACTACTCTCTATCCGGCCTCGCAACTTCCAGC +
Preference number: 6 (lower is better)
Translates to: EERRSLHCPTPA*HYSLSGLATSS
Trigger: GCTGGAAGTTGCGAGGCCGGATAGAGAGTAGTGGCAAGCAGGTGTGGGACAGTGAAGAGACCGTCTTTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp AAGACTCTGGTAAGAGGTGCAGGAAGCTGTGGGGTCTaGTTTAGTGTAGGGAGGGGAGGCTGGGTGACTACA +
Preference number: 6 (lower is better)
Translates to: KTLVRGAGSCGV*FSVGRGGWVTT
Trigger: TGTAGTCACCCAGCCTCCCCTCCCTACACTAAAGCAGACCCCACAGCTTCCTGCACCTCTTACCAGAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp CTTCCTGGGCAGATGTGGCAGAGTTCCCCCATAGCTTaGTGCGTTCACACACTTCCTGGAATACACGCGCTT +
Preference number: 6 (lower is better)
Translates to: LPGQMWQSSPIA*CVHTLPGIHAL
Trigger: AAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp GCCTGTTCTCGGAGTGAGGGTGTGTCTGGCGGGCTCTaGCTATATGTGGAAAATCGCTTGGTGACTGTGGAA +
Preference number: 6 (lower is better)
Translates to: ACSRSEGVSGGL*LYVENRLVTVE
Trigger: TTCCACAGTCACCAAGCGATTTTCCACATATAGCCAGAGCCCGCCAGACACACCCTCACTCCGAGAACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 72 bp GTTGTACTGAGGGCGGGACTTGTGGCAGAATGGCCATaGTTGAGGACAGGCAGAACACTACTGACACGCTCC +
Preference number: 6 (lower is better)
Translates to: VVLRAGLVAEWP*LRTGRTLLTRS
Trigger: GGAGCGTGTCAGTAGTGTTCTGCCTGTCCTCAACAATGGCCATTCTGCCACAAGTCCCGCCCTCAGTACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 72 bp ACTTCCTGGGCAGATGTGGCAGAGTTCCCCCATAGCTaGCTGCGTTCACACACTTCCTGGAATACACGCGCT +
Preference number: 6 (lower is better)
Translates to: TSWADVAEFPHS*LRSHTSWNTRA
Trigger: AGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 72 bp TGCTATAGGCGCGGACCATGTTGTAGGCACCATCCCTaGGACGCCGCTGGACACAGTATGCTTCATACAACT +
Preference number: 6 (lower is better)
Translates to: CYRRGPCCRHHP*DAAGHSMLHTT
Trigger: AGTTGTATGAAGCATACTGTGTCCAGCGGCGTCTCAGGGATGGTGCCTACAACATGGTCCGCGCCTATAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp CAGCCCTTTCATCCGGAGATGAAACTCGCCCAACTGTaGCTCCAGCTCATTCTCCAGAAGACACATGCTCTC +
Preference number: 6 (lower is better)
Translates to: QPFHPEMKLAQL*LQLILQKTHAL
Trigger: GAGAGCATGTGTCTTCTGGAGAATGAGCTGGAGGCACAGTTGGGCGAGTTTCATCTCCGGATGAAAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 72 bp CCAGGGCTGAACACCCTGTGCTTAGAGACTGGCCATTaGATGAGTCTAGTCTGTCCTCTGCCACAACCTCTG +
Preference number: 6 (lower is better)
Translates to: PGLNTLCLETGH*MSLVCPLPQPL
Trigger: CAGAGGTTGTGGCAGAGGACAGACTAGACTCATCAAATGGCCAGTCTCTAAGCACAGGGTGTTCAGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp GGACTCCATATGACTTCTAGGCTTAGCTTGATGGTGCCAAGATCATaGATATCCACAGCCACAACCTGGGGCAGGGCGGCAAACAGGTCC +
Preference number: 6 (lower is better)
Translates to: GLHMTSRLSLMVPRS*ISTATTWGRAANRS
Trigger: GGACCTGTTTGCCGCCCTGCCCCAGGTTGTGGCTGTGGATATCAATGATCTTGGCACCATCAAGCTAAGCCTAGAAGTCATATGGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 72 bp ATGACTTCTAGGCTTAGCTTGATGGTGCCAAGATCATaGATATCCACAGCCACAACCTGGGGCAGGGCGGCA +
Preference number: 6 (lower is better)
Translates to: MTSRLSLMVPRS*ISTATTWGRAA
Trigger: TGCCGCCCTGCCCCAGGTTGTGGCTGTGGATATCAATGATCTTGGCACCATCAAGCTAAGCCTAGAAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp AGTGAGGGTGTGTCTGGCGGGCTCTGGCTATATGTGGAAAATCGCTaGGTGACTGTGGAAGCTTTGTTGACTGTAGAAGCAGCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: SEGVSGGLWLYVENR*VTVEALLTVEAAEG
Trigger: GCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCACCAAGCGATTTTCCACATATAGCCAGAGCCCGCCAGACACACCCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp GTAGGCACCATCCCTGAGACGCCGCTGGACACAGTATaGTTCATACAACTCGTCAATCTTACTGGCATGGAA +
Preference number: 6 (lower is better)
Translates to: VGTIPETPLDTV*FIQLVNLTGME
Trigger: TTCCATGCCAGTAAGATTGACGAGTTGTATGAAGCATACTGTGTCCAGCGGCGTCTCAGGGATGGTGCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp TCCGGTGCTAACCTTAGGGCTTTCAGCACAACGGCCTaGTCATCAGAGTTCAGGTTCTGTACTAGTAACACC +
Preference number: 6 (lower is better)
Translates to: SGANLRAFSTTA*SSEFRFCTSNT
Trigger: GGTGTTACTAGTACAGAACCTGAACTCTGATGACCAGGCCGTTGTGCTGAAAGCCCTAAGGTTAGCACCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS GCA 72 bp TCCAGTCGTCGAAGAAAGCGTTCAATGGACTTGACTTaGTTGTCCAAGTCATACAGGAAGCCTAGGCGGGAA +
Preference number: 6 (lower is better)
Translates to: SSRRRKRSMDLT*LSKSYRKPRRE
Trigger: TTCCCGCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp TCCTTGGTCTCACAGGAGACACTGCCCACGACTACGTaGTTAGCCAGTCCCTTTAATTCTGTCACCTTGATA +
Preference number: 6 (lower is better)
Translates to: SLVSQETLPTTT*LASPFNSVTLI
Trigger: TATCAAGGTGACAGAATTAAAGGGACTGGCTAACCACGTAGTCGTGGGCAGTGTCTCCTGTGAGACCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 72 bp GTGTCTGGCGGGCTCTGGCTATATGTGGAAAATCGCTaGGTGACTGTGGAAGCTTTGTTGACTGTAGAAGCA +
Preference number: 6 (lower is better)
Translates to: VSGGLWLYVENR*VTVEALLTVEA
Trigger: TGCTTCTACAGTCAACAAAGCTTCCACAGTCACCAAGCGATTTTCCACATATAGCCAGAGCCCGCCAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp TGGTCATCCTTGTCAAAGGGACTCCATATGACTTCTAGGCTTAGCTaGATGGTGCCAAGATCATTGATATCCACAGCCACAACCTGGGGC +
Preference number: 6 (lower is better)
Translates to: WSSLSKGLHMTSRLS*MVPRSLISTATTWG
Trigger: GCCCCAGGTTGTGGCTGTGGATATCAATGATCTTGGCACCATCAAGCTAAGCCTAGAAGTCATATGGAGTCCCTTTGACAAGGATGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp GGGCTCTGGCTATATGTGGAAAATCGCTTGGTGACTGTGGAAGCTTaGTTGACTGTAGAAGCAGCTGAAGGCTGGTCATCCTTGTCAAAG +
Preference number: 6 (lower is better)
Translates to: GLWLYVENRLVTVEA*LTVEAAEGWSSLSK
Trigger: CTTTGACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCACCAAGCGATTTTCCACATATAGCCAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 72 bp GGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGACTTaGCTTGCTTGTCCAAGTCATACAGGAAGCCTAGGC +
Preference number: 6 (lower is better)
Translates to: GIPVVEESVQWT*LACPSHTGSLG
Trigger: GCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGAATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS TCA 72 bp GGTGACTGTGGAAGCTTTGTTGACTGTAGAAGCAGCTaGAGGCTGGTCATCCTTGTCAAAGGGACTCCATAT +
Preference number: 6 (lower is better)
Translates to: GDCGSFVDCRSS*RLVILVKGTPY
Trigger: ATATGGAGTCCCTTTGACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 72 bp AGTCGTCGAAGAAAGCGTTCAATGGACTTGACTTGCTaGTCCAAGTCATACAGGAAGCCTAGGCGGGAATTC +
Preference number: 6 (lower is better)
Translates to: SRRRKRSMDLTC*SKSYRKPRREF
Trigger: GAATTCCCGCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp TGGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGACTTGACTTGCTaGTCCAAGTCATACAGGAAGCCTAGGCGGGAATTCCTTTTGGAC +
Preference number: 6 (lower is better)
Translates to: WNSSRRRKRSMDLTC*SKSYRKPRREFLLD
Trigger: GTCCAAAAGGAATTCCCGCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGAATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp TTACTGGCATGGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGACTaGACTTGCTTGTCCAAGTCATACAGGAAGCCTAGGCGGGAATTC +
Preference number: 6 (lower is better)
Translates to: LLAWNSSRRRKRSMD*TCLSKSYRKPRREF
Trigger: GAATTCCCGCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGAATTCCATGCCAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 90 bp CTCTGGCTATATGTGGAAAATCGCTTGGTGACTGTGGAAGCTTTGTaGACTGTAGAAGCAGCTGAAGGCTGGTCATCCTTGTCAAAGGGA +
Preference number: 6 (lower is better)
Translates to: LWLYVENRLVTVEAL*TVEAAEGWSSLSKG
Trigger: TCCCTTTGACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCACCAAGCGATTTTCCACATATAGCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp GTGGAAGCTTTGTTGACTGTAGAAGCAGCTGAAGGCTaGTCATCCTTGTCAAAGGGACTCCATATGACTTCT +
Preference number: 6 (lower is better)
Translates to: VEALLTVEAAEG*SSLSKGLHMTS
Trigger: AGAAGTCATATGGAGTCCCTTTGACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 72 bp TGGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGACTaGACTTGCTTGTCCAAGTCATACAGGAAGCCTAGG +
Preference number: 6 (lower is better)
Translates to: WNSSRRRKRSMD*TCLSKSYRKPR
Trigger: CCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 72 bp TTGTTGACTGTAGAAGCAGCTGAAGGCTGGTCATCCTaGTCAAAGGGACTCCATATGACTTCTAGGCTTAGC +
Preference number: 6 (lower is better)
Translates to: LLTVEAAEGWSS*SKGLHMTSRLS
Trigger: GCTAAGCCTAGAAGTCATATGGAGTCCCTTTGACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CAA 72 bp CTATATGTGGAAAATCGCTTGGTGACTGTGGAAGCTTaGTTGACTGTAGAAGCAGCTGAAGGCTGGTCATCC +
Preference number: 6 (lower is better)
Translates to: LYVENRLVTVEA*LTVEAAEGWSS
Trigger: GGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCACCAAGCGATTTTCCACATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10
CDS CCA 72 bp CAGTATGCTTCATACAACTCGTCAATCTTACTGGCATaGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGAC +
Preference number: 6 (lower is better)
Translates to: QYASYNSSILLA*NSSRRRKRSMD
Trigger: GTCCATTGAACGCTTTCTTCGACGACTGGAATTCCATGCCAGTAAGATTGACGAGTTGTATGAAGCATACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043531.10