Pregenerated sensors for RIPOR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038604Ensembl transcript IDs: ENSMUST00000043531.10
Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTaGCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGG | + |
Preference number: 1 (lower is better) Translates to: RNLWGEVTGTSLHPP*QCLMSPENKGRDTG Trigger: CCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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3UTR GCA 90 bp | CTGACCAAATGGCCAGGCCTCCGACACTGTGTGTGGCAAAGACTGTaGAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCA | + |
Preference number: 1 (lower is better) Translates to: LTKWPGLRHCVWQRL*RTAAGRHFISGILP Trigger: TGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCCTGGCCATTTGGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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3UTR CCA 90 bp | AGGCAAGGCAAGCTGACCAAATGGCCAGGCCTCCGACACTGTGTGTaGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCA | + |
Preference number: 1 (lower is better) Translates to: RQGKLTKWPGLRHCV*QRLCRTAAGRHFIS Trigger: TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCCTGGCCATTTGGTCAGCTTGCCTTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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3UTR CCA 90 bp | AATACAAACCCAAGGGATGTGATGAGGCAAGGCAAGCTGACCAAATaGCCAGGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACC | + |
Preference number: 1 (lower is better) Translates to: NTNPRDVMRQGKLTK*PGLRHCVWQRLCRT Trigger: GGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCCTGGCCATTTGGTCAGCTTGCCTTGCCTCATCACATCCCTTGGGTTTGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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3UTR-3UTR CCA 90 bp | GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGGTGGGGAGAGGTGACTaGAACCAGCCTTCACCCTCC | + |
Preference number: 2 (lower is better) Translates to: AEPRLGGTSFQAFCQPQWVGRGD*NQPSPS Trigger: GGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCAC...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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3UTR-3UTR GCA 90 bp | GTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCACACCCTCCCTGCCAGTaGCTGATGAGCCCTGAAAAC | + |
Preference number: 2 (lower is better) Translates to: VCGKDCAEPRLGGTSFQAHPPCQ*LMSPEN Trigger: GTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTG...TGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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3UTR-3UTR GCA 90 bp | ACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGCCTTCACCCTCCCTaGCAGTGCCTGATGAGCCCT | + |
Preference number: 2 (lower is better) Translates to: TLCVAKTVQNRGWEALHFSLHPP*QCLMSP Trigger: AGGGCTCATCAGGCACTGGCAGGGAGGGTGAAGGCT...GAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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3UTR GCA 72 bp | TGGCCAGGCCTCCGACACTGTGTGTGGCAAAGACTGTaGAGAACCGCGGCTGGGAGGCACTTCATTTCAGGC | + |
Preference number: 3 (lower is better) Translates to: WPGLRHCVWQRL*RTAAGRHFISG Trigger: GCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCCTGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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3UTR CCA 72 bp | AAGCTGACCAAATGGCCAGGCCTCCGACACTGTGTGTaGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCAC | + |
Preference number: 3 (lower is better) Translates to: KLTKWPGLRHCV*QRLCRTAAGRH Trigger: GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCCTGGCCATTTGGTCAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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3UTR TCA 72 bp | CAGCCTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTaGAAACAAGGGAAGGGACACTGGGAGCCGGCAATT | + |
Preference number: 3 (lower is better) Translates to: QPSPSLPVPDEP*KQGKGHWEPAI Trigger: AATTGCCGGCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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3UTR GCA 72 bp | TGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTaGCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGG | + |
Preference number: 3 (lower is better) Translates to: WGEVTGTSLHPP*QCLMSPENKGR Trigger: CCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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3UTR CCA 72 bp | CCAAGGGATGTGATGAGGCAAGGCAAGCTGACCAAATaGCCAGGCCTCCGACACTGTGTGTGGCAAAGACTG | + |
Preference number: 3 (lower is better) Translates to: PRDVMRQGKLTK*PGLRHCVWQRL Trigger: CAGTCTTTGCCACACACAGTGTCGGAGGCCTGGCCATTTGGTCAGCTTGCCTTGCCTCATCACATCCCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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3UTR TCA 72 bp | ATTAGATTTTCATTGATAGGAATTTGTGGGGAGAGGTaGCTGGAACCAGCCTTCACCCTCCCTGCCAGTGCC | + |
Preference number: 3 (lower is better) Translates to: IRFSLIGICGER*LEPAFTLPASA Trigger: GGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCTATCAATGAAAATCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | TGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCGGCAACTGAGCAGGCGGCGCTaGGGCCGCACCGACAGGGAC | + |
Preference number: 4 (lower is better) Translates to: CQCLMSPENKGRDTGSRQLSRRR*GRTDRD Trigger: GTCCCTGTCGGTGCGGCCGCAGCGCCGCCTGCTCAG...TTGCCGGCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCGCCCGCGCTCGTGGCTaGCGAGGACGCCTGCGAAGG | + |
Preference number: 4 (lower is better) Translates to: RNLWGEVTGTSLHPPCQCARARG*RGRLRR Trigger: CCTTCGCAGGCGTCCTCGGCAGCCACGAGCGCGGGC...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACAGGGCCCAGGCCTCCTaGCAGCGCAGGGGTCCAAAT | + |
Preference number: 4 (lower is better) Translates to: GLRHCVWQRLCRTAAGRHRAQAS*QRRGPN Trigger: ATTTGGACCCCTGCGCTGCCAGGAGGCCTGGGCCCT...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATTCCTCCCCGCACTGCTaGAGGCTCTGCCGGGCGGCT | + |
Preference number: 4 (lower is better) Translates to: FVGRGDWNQPSPSLPVPDSSPHC*RLCRAA Trigger: AGCCGCCCGGCAGAGCCTGCAGCAGTGCGGGGAGGA...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATCCTTCCTCCCCGCACTaGTGCAGGCTCTGCCGGGCG | + |
Preference number: 4 (lower is better) Translates to: FVGRGDWNQPSPSLPVPDPSSPH*CRLCRA Trigger: CGCCCGGCAGAGCCTGCAGCAGTGCGGGGAGGAAGG...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCACGCCTGCGAAGGACTaGCTCCTACTGACCCGGGCG | + |
Preference number: 4 (lower is better) Translates to: PPCQCLMSPENKGRDTGSTPAKD*LLLTRA Trigger: CGCCCGGGTCAGTAGGAGCCAGTCCTTCGCAGGCGT...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCTCGATGGCCTCGAGTaGCCTCGGCCAGGCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: PPCQCLMSPENKGRDTGSLDGLE*PRPGCL Trigger: GAGACAGCCTGGCCGAGGCCACTCGAGGCCATCGAG...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCACTGCTCCCCCGGGCCTaGTTGGGGCCTCCTGGGCAG | + |
Preference number: 4 (lower is better) Translates to: HCVWQRLCRTAAGRHFISLLPRA*LGPPGQ Trigger: CTGCCCAGGAGGCCCCAACCAGGCCCGGGGGAGCAG...TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCGGAGGGGAGGCTGGGTaGCTACAGGGCAGAGGTTCA | + |
Preference number: 4 (lower is better) Translates to: PPCQCLMSPENKGRDTGSGGEAG*LQGRGS Trigger: TGAACCTCTGCCCTGTAGTCACCCAGCCTCCCCTCC...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | AATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGCAGGTCCAGCCTCTCTaGCTGCGGCACCTTGGGAGC | + |
Preference number: 4 (lower is better) Translates to: NLWGEVTGTSLHPPCQCLQVQPL*LRHLGS Trigger: GCTCCCAAGGTGCCGCAGCCAGAGAGGCTGGACCTG...CAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | TTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATGGGCCTCTCGACTCCCTaGGGACCCAGTGCTATAGGC | + |
Preference number: 4 (lower is better) Translates to: LWGEVTGTSLHPPCQCLMGLSTP*GPSAIG Trigger: GCCTATAGCACTGGGTCCCCAGGGAGTCGAGAGGCC...CATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCCGTTGCCTCAGGGACTaGGGCTTGAGCAACTGCGGC | + |
Preference number: 4 (lower is better) Translates to: LRHCVWQRLCRTAAGRHFRCLRD*GLSNCG Trigger: GCCGCAGTTGCTCAAGCCCCAGTCCCTGAGGCAACG...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCCAGAGCCTGTGGAGGTaGGGGGAGAGGGCGTGGTTG | + |
Preference number: 4 (lower is better) Translates to: AKTVQNRGWEALHFRHSAQSLWR*GERAWL Trigger: CAACCACGCCCTCTCCCCTCACCTCCACAGGCTCTG...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | AATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGACTGGCTGCAGAAGGTaGGGAGCACCCGCTCCACAG | + |
Preference number: 4 (lower is better) Translates to: NLWGEVTGTSLHPPCQCLTGCRR*GAPAPQ Trigger: CTGTGGAGCGGGTGCTCCTCACCTTCTGCAGCCAGT...CAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGGACAGGCTCCGAAGCTaGGTGCTGACAGCAGCCATG | + |
Preference number: 4 (lower is better) Translates to: AEPRLGGTSFQAFCQPQWDRLRS*VLTAAM Trigger: CATGGCTGCTGTCAGCACTCAGCTTCGGAGCCTGTC...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACGGAAGCTGTGGGGTCTaGTTTAGTGTAGGGAGGGGA | + |
Preference number: 4 (lower is better) Translates to: GLRHCVWQRLCRTAAGRHGSCGV*FSVGRG Trigger: TCCCCTCCCTACACTAAAGCAGACCCCACAGCTTCC...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | TTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATGTCAGCAGGAGGCGGCTaGAGTGGTACAGGTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: LWGEVTGTSLHPPCQCLMSAGGG*SGTGAG Trigger: TCCAGCACCTGTACCACTGCAGCCGCCTCCTGCTGA...CATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCCGGCCACTCGAGTCTaGACGTCCCCATCTTCCAGC | + |
Preference number: 4 (lower is better) Translates to: RNLWGEVTGTSLHPPCQCPATRV*TSPSSS Trigger: GCTGGAAGATGGGGACGTGCAGACTCGAGTGGCCGG...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCTGTGCTGGCCATGCTaGTGGGCCCAAAGATGCAGG | + |
Preference number: 4 (lower is better) Translates to: PPCQCLMSPENKGRDTGSLCWPC*WAQRCR Trigger: CCTGCATCTTTGGGCCCAGCAGCATGGCCAGCACAG...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | AATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGGTAGGGAGGGGAGGCTaGGTGACTACAGGGCAGAGG | + |
Preference number: 4 (lower is better) Translates to: NLWGEVTGTSLHPPCQCLVGRGG*VTTGQR Trigger: CCTCTGCCCTGTAGTCACCCAGCCTCCCCTCCCTAC...CAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCAGACGGGCACCGTACTaGCTGCAGAAGGTGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: PPCQCLMSPENKGRDTGSRRAPY*LQKVRS Trigger: GCTCCTCACCTTCTGCAGCCAGTACGGTGCCCGTCT...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | AACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACCTGGTTGGGGCCTCCTaGGCAGCTTCTGTCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: NRGWEALHFRHSANPSGNLVGAS*AASVPG Trigger: CCCTGGGACAGAAGCTGCCCAGGAGGCCCCAACCAG...GTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCGGGCTTGGGGTACTGTaGGTAGGGCTTGGGGTAGCC | + |
Preference number: 4 (lower is better) Translates to: AKTVQNRGWEALHFRHSAGLGVL*VGLGVA Trigger: GGCTACCCCAAGCCCTACTCACAGTACCCCAAGCCC...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | AATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGTGCCCTCAGGAGCCTTaGTACAGCCCAAAGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: NLWGEVTGTSLHPPCQCLCPQEP*YSPKPG Trigger: GCCTGGCTTTGGGCTGTATCAAGGCTCCTGAGGGCA...CAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | ACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCCCCAGCTCCTCCCGTTaGCTCAGGGACTGGGGCTTG | + |
Preference number: 4 (lower is better) Translates to: TLCVAKTVQNRGWEALHFPSSSR*LRDWGL Trigger: CAAGCCCCAGTCCCTGAGGCAACGGGAGGAGCTGGG...GAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTAGCCGAGTCACCTCCTaGTCCAGGCCCTGCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: LHPPCQCLMSPENKGRDTSRVTS*SRPCSS Trigger: TGAGCTGCAGGGCCTGGAGCAGGAGGTGACTCGGCT...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCGCAGGGGTCCAAATGTaGCCAGTTTCAGCAGGAGGC | + |
Preference number: 4 (lower is better) Translates to: LRHCVWQRLCRTAAGRHFAGVQM*PVSAGG Trigger: GCCTCCTGCTGAAACTGGGCACATTTGGACCCCTGC...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTTCCACAGCCACAACCTaGGGCAGGGCGGCAAACAGG | + |
Preference number: 4 (lower is better) Translates to: LHPPCQCLMSPENKGRDTSTATT*GRAANR Trigger: CCTGTTTGCCGCCCTGCCCCAGGTTGTGGCTGTGGA...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | AATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGCTTCGGAAGGCAACTTaGACAGGCAGGGGCTCAGGC | + |
Preference number: 4 (lower is better) Translates to: NLWGEVTGTSLHPPCQCLLRKAT*TGRGSG Trigger: GCCTGAGCCCCTGCCTGTCCAAGTTGCCTTCCGAAG...CAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCAGGAGGCGGCTGCAGTaGTACAGGTGCTGGACCAAG | + |
Preference number: 4 (lower is better) Translates to: RNLWGEVTGTSLHPPCQCRRRLQ*YRCWTK Trigger: CTTGGTCCAGCACCTGTACCACTGCAGCCGCCTCCT...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | AACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACTGTAGGCACCATCCCTaGGACGCCGCTGGACACAGT | + |
Preference number: 4 (lower is better) Translates to: NRGWEALHFRHSANPSGNCRHHP*DAAGHS Trigger: ACTGTGTCCAGCGGCGTCTCAGGGATGGTGCCTACA...GTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCTGGGGTAGCCTGGGTTaGGTCTGTTGCATTGGGAAC | + |
Preference number: 4 (lower is better) Translates to: PPCQCLMSPENKGRDTGSWGSLG*VCCIGN Trigger: GTTCCCAATGCAACAGACTCAACCCAGGCTACCCCA...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGGGCCAGGTTATGTTCTaGATGTTGGGGTTCAGGGGC | + |
Preference number: 4 (lower is better) Translates to: AEPRLGGTSFQAFCQPQWGQVMF*MLGFRG Trigger: GCCCCTGAACCCCAACATTCAGAACATAACCTGGCC...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | GTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATCAGGGACTGGGGCTTaGGCAACTGCGGCCAGGTTA | + |
Preference number: 4 (lower is better) Translates to: VCGKDCAEPRLGGTSFQASGTGA*ATAARL Trigger: TAACCTGGCCGCAGTTGCTCAAGCCCCAGTCCCTGA...TGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | AACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACGGCCTTGTCTCTGCATaGGCAGACTCTCCAGCCGAG | + |
Preference number: 4 (lower is better) Translates to: NRGWEALHFRHSANPSGNGLVSA*ADSPAE Trigger: CTCGGCTGGAGAGTCTGCTCATGCAGAGACAAGGCC...GTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTAGGGCAGAGGTTCAGTaGCTGGGCCGGTGGATTCTG | + |
Preference number: 4 (lower is better) Translates to: LHPPCQCLMSPENKGRDTRAEVQ*LGRWIL Trigger: CAGAATCCACCGGCCCAGGCACTGAACCTCTGCCCT...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCCTGCAGTGGTACAGGTaGTGGACCAAGGTAGCATCC | + |
Preference number: 4 (lower is better) Translates to: LRHCVWQRLCRTAAGRHFLQWYR*WTKVAS Trigger: GGATGCTACCTTGGTCCAGCACCTGTACCACTGCAG...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | GTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATGCTGGGCCCAAAGATaGAGGGCAGAGCATCCAGGG | + |
Preference number: 4 (lower is better) Translates to: VCGKDCAEPRLGGTSFQACWAQR*RAEHPG Trigger: CCCTGGATGCTCTGCCCTGCATCTTTGGGCCCAGCA...TGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCCTTCCGTGGGGGCCCTaGTGGGCTGAAGACAGTGAA | + |
Preference number: 4 (lower is better) Translates to: AKTVQNRGWEALHFRHSALPWGP*WAEDSE Trigger: TTCACTGTCTTCAGCCCACCAGGGCCCCCACGGAAG...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | TTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATGGTTGCACCAGAGGCTTaGGAGTTGAGTGTCGAGCTG | + |
Preference number: 4 (lower is better) Translates to: LWGEVTGTSLHPPCQCLMVAPEA*ELSVEL Trigger: CAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAAC...CATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCCAGTGGTACAGGTGCTaGACCAAGGTAGCATCCAGG | + |
Preference number: 4 (lower is better) Translates to: LRHCVWQRLCRTAAGRHFQWYRC*TKVASR Trigger: CCTGGATGCTACCTTGGTCCAGCACCTGTACCACTG...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | ACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCTCGGCTAAGCCTGGCTaGCGCAGGGAAAGACGGGCA | + |
Preference number: 4 (lower is better) Translates to: TLCVAKTVQNRGWEALHFSAKPG*RRERRA Trigger: TGCCCGTCTTTCCCTGCGCCAGCCAGGCTTAGCCGA...GAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCAAACTCGCCCAACTGTaGCTCCAGCTCATTCTCCAG | + |
Preference number: 4 (lower is better) Translates to: PPCQCLMSPENKGRDTGSKLAQL*LQLILQ Trigger: CTGGAGAATGAGCTGGAGGCACAGTTGGGCGAGTTT...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCGTCAGGCCTTGTCTCTaGATGAGCAGACTCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: RNLWGEVTGTSLHPPCQCVRPCL*MSRLSS Trigger: GCTGGAGAGTCTGCTCATGCAGAGACAAGGCCTGAC...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCTCCCTGAGACGCCGCTaGACACAGTATGCTTCATAC | + |
Preference number: 4 (lower is better) Translates to: LRHCVWQRLCRTAAGRHFSLRRR*TQYASY Trigger: GTATGAAGCATACTGTGTCCAGCGGCGTCTCAGGGA...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | AATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGCGGCAAACAGGTCCTTaGTCTCACAGGAGACACTGC | + |
Preference number: 4 (lower is better) Translates to: NLWGEVTGTSLHPPCQCLRQTGP*SHRRHC Trigger: GCAGTGTCTCCTGTGAGACCAAGGACCTGTTTGCCG...CAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCCCAGGGATGGGGTCATaGCTGGCTCTTCATCCATGG | + |
Preference number: 4 (lower is better) Translates to: AKTVQNRGWEALHFRHSAPGMGS*LALHPW Trigger: CCATGGATGAAGAGCCAGCCATGACCCCATCCCTGG...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCGGACTTGTGGCAGAATaGCCATTGTTGAGGACAGGC | + |
Preference number: 4 (lower is better) Translates to: PPCQCLMSPENKGRDTGSGLVAE*PLLRTG Trigger: GCCTGTCCTCAACAATGGCCATTCTGCCACAAGTCC...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGAGTATGGGTAGGGCTTaGGGTACTGTGAGTAGGGCT | + |
Preference number: 4 (lower is better) Translates to: AEPRLGGTSFQAFCQPQWSMGRA*GTVSRA Trigger: AGCCCTACTCACAGTACCCCAAGCCCTACCCATACT...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | TGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCGGCAACGTTCACACACTTCCTaGAATACACGCGCTTCCCGC | + |
Preference number: 4 (lower is better) Translates to: CQCLMSPENKGRDTGSRQRSHTS*NTRASR Trigger: GCGGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACG...TTGCCGGCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTCCCCATCTTCCAGCTaGTCCAGGAAGCACAAGAGA | + |
Preference number: 4 (lower is better) Translates to: AEPRLGGTSFQAFCQPQWSPSSS*SRKHKR Trigger: TCTCTTGTGCTTCCTGGACCAGCTGGAAGATGGGGA...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAATCCCTGGGGACCCAGTaGTATAGGCGCGGACCATGT | + |
Preference number: 4 (lower is better) Translates to: AAGRHFISGILPTPVVTKSLGTQ*YRRGPC Trigger: ACATGGTCCGCGCCTATAGCACTGGGTCCCCAGGGA...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTTGTCCCACACCTGCTTaGCACTACTCTCTATCCGGC | + |
Preference number: 4 (lower is better) Translates to: LHPPCQCLMSPENKGRDTCPTPA*HYSLSG Trigger: GCCGGATAGAGAGTAGTGGCAAGCAGGTGTGGGACA...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCTGGGCCGGTGGATTCTaGAGAGGAGCTGGAGATTAT | + |
Preference number: 4 (lower is better) Translates to: RNLWGEVTGTSLHPPCQCWAGGF*RGAGDY Trigger: ATAATCTCCAGCTCCTCTGCAGAATCCACCGGCCCA...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCGACTCTGGTAAGAGGTaGAGGAAGCTGTGGGGTCTG | + |
Preference number: 4 (lower is better) Translates to: AKTVQNRGWEALHFRHSADSGKR*RKLWGL Trigger: CAGACCCCACAGCTTCCTGCACCTCTTACCAGAGTC...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTCGGCACCTTGGGAGCTaGATGGGCCACAGAAAACAT | + |
Preference number: 4 (lower is better) Translates to: LHPPCQCLMSPENKGRDTRHLGS*MGHRKH Trigger: ATGTTTTCTGTGGCCCATCCAGCTCCCAAGGTGCCG...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCGGCGGGAATTCCTTTTaGACTCCTTTATCTGGCGCT | + |
Preference number: 4 (lower is better) Translates to: PPCQCLMSPENKGRDTGSGGNSF*TPLSGA Trigger: AGCGCCAGATAAAGGAGTCCAAAAGGAATTCCCGCC...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | AACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACCACGCTCCACGTGGGTaGAATCTGGATAGACAAGCG | + |
Preference number: 4 (lower is better) Translates to: NRGWEALHFRHSANPSGNHAPRG*NLDRQA Trigger: CGCTTGTCTATCCAGATTCCACCCACGTGGAGCGTG...GTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCTCACATAGGCATCCATaGAGGGGCTGTCCAAGGCTT | + |
Preference number: 4 (lower is better) Translates to: RNLWGEVTGTSLHPPCQCSHRHP*RGCPRL Trigger: AAGCCTTGGACAGCCCCTCCATGGATGCCTATGTGA...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | TGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCGGCAAGCTTCTGTGTCTGTTTaGCACAAGTACACCAGGGGC | + |
Preference number: 4 (lower is better) Translates to: CQCLMSPENKGRDTGSRQASVSV*HKYTRG Trigger: GCCCCTGGTGTACTTGTGCCAAACAGACACAGAAGC...TTGCCGGCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACGACGGCCATATTTCATaGAGATCTCATATTGATCGC | + |
Preference number: 4 (lower is better) Translates to: GLRHCVWQRLCRTAAGRHDGHIS*RSHIDR Trigger: GCGATCAATATGAGATCTGCATGAAATATGGCCGTC...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAAAGGGGCTCAGGCTGTTaGACCAGAGGCTTGGGAGTT | + |
Preference number: 4 (lower is better) Translates to: AAGRHFISGILPTPVVTKRGSGC*TRGLGV Trigger: AACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCT...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCTTGAGTCTGTTGCATTaGGAACAGAGCCTGTGGAGG | + |
Preference number: 4 (lower is better) Translates to: RNLWGEVTGTSLHPPCQCLSLLH*EQSLWR Trigger: CCTCCACAGGCTCTGTTCCCAATGCAACAGACTCAA...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAACGCAACTTCCAGCGCTaGCGGCCATATTTCATGCAG | + |
Preference number: 4 (lower is better) Translates to: AAGRHFISGILPTPVVTKRNFQR*RPYFMQ Trigger: CTGCATGAAATATGGCCGTCAGCGCTGGAAGTTGCG...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAATCCTCTAGCTGTCGATaGGCAGACTGTCCTTCCTCC | + |
Preference number: 4 (lower is better) Translates to: AAGRHFISGILPTPVVTKSSSCR*ADCPSS Trigger: GGAGGAAGGACAGTCTGCTCATCGACAGCTAGAGGA...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | CACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGCTGTGCCAGAGAGCTaGGGGCTTGATGAATCATCT | + |
Preference number: 4 (lower is better) Translates to: HCVWQRLCRTAAGRHFISAVPES*GLDESS Trigger: AGATGATTCATCAAGCCCGCAGCTCTCTGGCACAGC...TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | CACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGGCTGAACACCCTGTaGTTAGAGACTGGCCATTTG | + |
Preference number: 4 (lower is better) Translates to: HCVWQRLCRTAAGRHFISGLNTL*LETGHL Trigger: CAAATGGCCAGTCTCTAAGCACAGGGTGTTCAGCCC...TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | GTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCAAGTCCCTCTGTACACTaGTCCCAAAAGGTCAGGAAG | + |
Preference number: 4 (lower is better) Translates to: VCGKDCAEPRLGGTSFQASPSVH*SQKVRK Trigger: CTTCCTGACCTTTTGGGACCAGTGTACAGAGGGACT...TGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTACTTTGTTGTTGCCGTaGACCAGCAGGGAGCTAAGA | + |
Preference number: 4 (lower is better) Translates to: LHPPCQCLMSPENKGRDTTLLLP*TSRELR Trigger: TCTTAGCTCCCTGCTGGTCCACGGCAACAACAAAGT...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAAGACTGTAGAAGCAGCTaGAGGCTGGTCATCCTTGTC | + |
Preference number: 4 (lower is better) Translates to: AAGRHFISGILPTPVVTKDCRSS*RLVILV Trigger: GACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTC...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | GACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTGCTTGTGAGGGGTTTTaGACCAGAGGAAGCAAGACT | + |
Preference number: 4 (lower is better) Translates to: DTVCGKDCAEPRLGGTSFACEGF*TRGSKT Trigger: AGTCTTGCTTCCTCTGGTTCAAAACCCCTCACAAGC...AAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | TGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCGGCAACCGCTGGACACAGTATaGTTCATACAACTCGTCAAT | + |
Preference number: 4 (lower is better) Translates to: CQCLMSPENKGRDTGSRQPLDTV*FIQLVN Trigger: ATTGACGAGTTGTATGAAGCATACTGTGTCCAGCGG...TTGCCGGCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | GACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTTCACTGTCCCACACCTaGTTGCCACTACTCTCTATC | + |
Preference number: 4 (lower is better) Translates to: DTVCGKDCAEPRLGGTSFSLSHT*LPLLSI Trigger: GATAGAGAGTAGTGGCAAGCAGGTGTGGGACAGTGA...AAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | CACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGAAGCAGCTGAAGGCTaGTCATCCTTGTCAAAGGGA | + |
Preference number: 4 (lower is better) Translates to: HCVWQRLCRTAAGRHFISEAAEG*SSLSKG Trigger: TCCCTTTGACAAGGATGACCAGCCTTCAGCTGCTTC...TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | GTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCAAAGGGGCGGAGTCTGTaGTTTTGTGAACCAAGTCTA | + |
Preference number: 4 (lower is better) Translates to: VCGKDCAEPRLGGTSFQAKGRSL*FCEPSL Trigger: TAGACTTGGTTCACAAAACCACAGACTCCGCCCCTT...TGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | TGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGTTCAGCACAACGGCCTaGTCATCAGAGTTCAGGTTC | + |
Preference number: 4 (lower is better) Translates to: WQRLCRTAAGRHFISGILFSTTA*SSEFRF Trigger: GAACCTGAACTCTGATGACCAGGCCGTTGTGCTGAA...CAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | CACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCATGGTGCCAAGATCATTaGTATCCACAGCCACAACCT | + |
Preference number: 4 (lower is better) Translates to: HCVWQRLCRTAAGRHFISWCQDH*YPQPQP Trigger: AGGTTGTGGCTGTGGATATCAATGATCTTGGCACCA...TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | TGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGGAGTCTGTGGTTTTGTaGACCAAGTCTAGCTGTGTC | + |
Preference number: 4 (lower is better) Translates to: WQRLCRTAAGRHFISGILESVVL*TKSSCV Trigger: GACACAGCTAGACTTGGTTCACAAAACCACAGACTC...CAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR GCA 90 bp | AGGAATTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCTCAATGGACTTGACTTaGTTGTCCAAGTCATACAGG | + |
Preference number: 4 (lower is better) Translates to: RNLWGEVTGTSLHPPCQCSMDLT*LSKSYR Trigger: CCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGA...GCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAATTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATTCAATCTTACTGGCATaGAATTCCAGTCGTCGAAGA | + |
Preference number: 4 (lower is better) Translates to: FVGRGDWNQPSPSLPVPDSILLA*NSSRRR Trigger: TCTTCGACGACTGGAATTCCATGCCAGTAAGATTGA...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAAAACTGTACCACTTCCTaGGCAGATGTGGCAGAGTTC | + |
Preference number: 4 (lower is better) Translates to: AAGRHFISGILPTPVVTKNCTTS*ADVAEF Trigger: GAACTCTGCCACATCTGCCCAGGAAGTGGTACAGTT...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR TCA 90 bp | ACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGCGTTCAATGGACTTaGCTTGCTTGTCCAAGTCAT | + |
Preference number: 4 (lower is better) Translates to: TLCVAKTVQNRGWEALHFSVQWT*LACPSH Trigger: ATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCT...GAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CCA 90 bp | ACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCTTATGTTCTGAATGTTaGGGTTCAGGGGCACTAGAT | + |
Preference number: 4 (lower is better) Translates to: TLCVAKTVQNRGWEALHFLCSEC*GSGALD Trigger: ATCTAGTGCCCCTGAACCCCAACATTCAGAACATAA...GAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | CTCCTGGGCCCGCGCTCGTGGCTGCCGAGGACGCCTGCGAAGGACTaGCTCCTACTGACCCGGGCGCTGAGCAGGCGGCGCTGCGGCCGC | + |
Preference number: 5 (lower is better) Translates to: LLGPRSWLPRTPAKD*LLLTRALSRRRCGR Trigger: GCGGCCGCAGCGCCGCCTGCTCAGCGCCCGGGTCAGTAGGAGCCAGTCCTTCGCAGGCGTCCTCGGCAGCCACGAGCGCGGGCCCAGGAG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | GACAGTGAAGCTCCTGGGCCCGCGCTCGTGGCTGCCGAGGACGCCTaGGAAGGACTGGCTCCTACTGACCCGGGCGCTGAGCAGGCGGCG | + |
Preference number: 5 (lower is better) Translates to: DSEAPGPALVAAEDA*EGLAPTDPGAEQAA Trigger: CGCCGCCTGCTCAGCGCCCGGGTCAGTAGGAGCCAGTCCTTCGCAGGCGTCCTCGGCAGCCACGAGCGCGGGCCCAGGAGCTTCACTGTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | GGCCCTGGTGGGCTGAAGACAGTGAAGCTCCTGGGCCCGCGCTCGTaGCTGCCGAGGACGCCTGCGAAGGACTGGCTCCTACTGACCCGG | + |
Preference number: 5 (lower is better) Translates to: GPGGLKTVKLLGPRS*LPRTPAKDWLLLTR Trigger: CCGGGTCAGTAGGAGCCAGTCCTTCGCAGGCGTCCTCGGCAGCCACGAGCGCGGGCCCAGGAGCTTCACTGTCTTCAGCCCACCAGGGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | GCCTCGAGTGGCCTCGGCCAGGCTGTCTCGGGCCTCTCGACTCCCTaGGGACCCAGTGCTATAGGCGCGGACCATGTTGTAGGCACCATC | + |
Preference number: 5 (lower is better) Translates to: ASSGLGQAVSGLSTP*GPSAIGADHVVGTI Trigger: GATGGTGCCTACAACATGGTCCGCGCCTATAGCACTGGGTCCCCAGGGAGTCGAGAGGCCCGAGACAGCCTGGCCGAGGCCACTCGAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | AATACACGCGCTTCCCGCAGCAGCCGTTCCAGGGCCCAGGCCTCCTaGCAGCGCAGGGGTCCAAATGTGCCCAGTTTCAGCAGGAGGCGG | + |
Preference number: 5 (lower is better) Translates to: NTRASRSSRSRAQAS*QRRGPNVPSFSRRR Trigger: CCGCCTCCTGCTGAAACTGGGCACATTTGGACCCCTGCGCTGCCAGGAGGCCTGGGCCCTGGAACGGCTGCTGCGGGAAGCGCGTGTATT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTCTGGCTGCGGCACCTaGGGAGCTGGATGGGCCACA | + |
Preference number: 5 (lower is better) Translates to: GLRHCVWQRLCRTAAGRHSGCGT*GAGWAT Trigger: TGTGGCCCATCCAGCTCCCAAGGTGCCGCAGCCAGA...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | GCCTCGGCTAAGCCTGGCTGGCGCAGGGAAAGACGGGCACCGTACTaGCTGCAGAAGGTGAGGAGCACCCGCTCCACAGAGCAGATGAAG | + |
Preference number: 5 (lower is better) Translates to: ASAKPGWRRERRAPY*LQKVRSTRSTEQMK Trigger: CTTCATCTGCTCTGTGGAGCGGGTGCTCCTCACCTTCTGCAGCCAGTACGGTGCCCGTCTTTCCCTGCGCCAGCCAGGCTTAGCCGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | TCTCCAGAAGACACATGCTCTCTGTATACTCTCGATGGCCTCGAGTaGCCTCGGCCAGGCTGTCTCGGGCCTCTCGACTCCCTGGGGACC | + |
Preference number: 5 (lower is better) Translates to: SPEDTCSLYTLDGLE*PRPGCLGPLDSLGT Trigger: GGTCCCCAGGGAGTCGAGAGGCCCGAGACAGCCTGGCCGAGGCCACTCGAGGCCATCGAGAGTATACAGAGAGCATGTGTCTTCTGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | GATGTGGCAGAGTTCCCCCATAGCTTGCTGCGTTCACACACTTCCTaGAATACACGCGCTTCCCGCAGCAGCCGTTCCAGGGCCCAGGCC | + |
Preference number: 5 (lower is better) Translates to: DVAEFPHSLLRSHTS*NTRASRSSRSRAQA Trigger: GGCCTGGGCCCTGGAACGGCTGCTGCGGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | GCCAGGCATCCGGCCACTCGAGTCTGCACGTCCCCATCTTCCAGCTaGTCCAGGAAGCACAAGAGAGCCCTTTCCCGGAAGACAGGACCA | + |
Preference number: 5 (lower is better) Translates to: ARHPATRVCTSPSSS*SRKHKRALSRKTGP Trigger: TGGTCCTGTCTTCCGGGAAAGGGCTCTCTTGTGCTTCCTGGACCAGCTGGAAGATGGGGACGTGCAGACTCGAGTGGCCGGATGCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCCAGGGGCTCAGGCTGTaGCACCAGAGGCTTGGGAGT | + |
Preference number: 5 (lower is better) Translates to: LRHCVWQRLCRTAAGRHFQGLRL*HQRLGS Trigger: ACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCTG...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCCTTCGGAAGGCAACTaGGACAGGCAGGGGCTCAGG | + |
Preference number: 5 (lower is better) Translates to: PPCQCLMSPENKGRDTGSPSEGN*DRQGLR Trigger: CCTGAGCCCCTGCCTGTCCAAGTTGCCTTCCGAAGG...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATCAACCTCTGGGCTGCTaGTGTGCCTGTCCCCGGGAC | + |
Preference number: 5 (lower is better) Translates to: FVGRGDWNQPSPSLPVPDQPLGC*CACPRD Trigger: GTCCCGGGGACAGGCACACAAGCAGCCCAGAGGTTG...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | TCTGGCCTTCGGAAGGCAACTTGGACAGGCAGGGGCTCAGGCTGTTaGACCAGAGGCTTGGGAGTTGAGTGTCGAGCTGTGCCAGAGAGC | + |
Preference number: 5 (lower is better) Translates to: SGLRKATWTGRGSGC*TRGLGVECRAVPES Trigger: GCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCTGCCTGTCCAAGTTGCCTTCCGAAGGCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | GTGATGCTAAGACTGGAAGCCCGGCTTCGAGTCAGGCCTTGTCTCTaGATGAGCAGACTCTCCAGCCGAGTCACCTCCTGCTCCAGGCCC | + |
Preference number: 5 (lower is better) Translates to: VMLRLEARLRVRPCL*MSRLSSRVTSCSRP Trigger: GGGCCTGGAGCAGGAGGTGACTCGGCTGGAGAGTCTGCTCATGCAGAGACAAGGCCTGACTCGAAGCCGGGCTTCCAGTCTTAGCATCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | GGAGCCTTGATACAGCCCAAAGCCAGGCATCCGGCCACTCGAGTCTaGACGTCCCCATCTTCCAGCTGGTCCAGGAAGCACAAGAGAGCC | + |
Preference number: 5 (lower is better) Translates to: GALIQPKARHPATRV*TSPSSSWSRKHKRA Trigger: GGCTCTCTTGTGCTTCCTGGACCAGCTGGAAGATGGGGACGTGCAGACTCGAGTGGCCGGATGCCTGGCTTTGGGCTGTATCAAGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | AGGCAACTTGGACAGGCAGGGGCTCAGGCTGTTGCACCAGAGGCTTaGGAGTTGAGTGTCGAGCTGTGCCAGAGAGCTGCGGGCTTGATG | + |
Preference number: 5 (lower is better) Translates to: RQLGQAGAQAVAPEA*ELSVELCQRAAGLM Trigger: CATCAAGCCCGCAGCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCTGCCTGTCCAAGTTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | CCGGCTGTAAGGGGCATGCCCATTGACCAGGGATGGGGTCATGGCTaGCTCTTCATCCATGGAACCAGACGTGAGGCTCTCTGGCCTTCG | + |
Preference number: 5 (lower is better) Translates to: PAVRGMPIDQGWGHG*LFIHGTRREALWPS Trigger: CGAAGGCCAGAGAGCCTCACGTCTGGTTCCATGGATGAAGAGCCAGCCATGACCCCATCCCTGGTCAATGGGCATGCCCCTTACAGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | GTGGGGGCGGGGCCAGTTGTACTGAGGGCGGGACTTGTGGCAGAATaGCCATTGTTGAGGACAGGCAGAACACTACTGACACGCTCCACG | + |
Preference number: 5 (lower is better) Translates to: VGAGPVVLRAGLVAE*PLLRTGRTLLTRST Trigger: CGTGGAGCGTGTCAGTAGTGTTCTGCCTGTCCTCAACAATGGCCATTCTGCCACAAGTCCCGCCCTCAGTACAACTGGCCCCGCCCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | ACCCGCTCCACAGAGCAGATGAAGGGGCTGAGTCCCTCTGTACACTaGTCCCAAAAGGTCAGGAAGCCGGGCCGAGAGGCGGAGAACTGT | + |
Preference number: 5 (lower is better) Translates to: TRSTEQMKGLSPSVH*SQKVRKPGREAENC Trigger: ACAGTTCTCCGCCTCTCGGCCCGGCTTCCTGACCTTTTGGGACCAGTGTACAGAGGGACTCAGCCCCTTCATCTGCTCTGTGGAGCGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATCTCAGGGACTGGGGCTaGAGCAACTGCGGCCAGGTT | + |
Preference number: 5 (lower is better) Translates to: FVGRGDWNQPSPSLPVPDLRDWG*SNCGQV Trigger: AACCTGGCCGCAGTTGCTCAAGCCCCAGTCCCTGAG...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACACAGCAGCCATGACTTaGTTGTTGCCGTGGACCAGC | + |
Preference number: 5 (lower is better) Translates to: GLRHCVWQRLCRTAAGRHTAAMT*LLPWTS Trigger: GCTGGTCCACGGCAACAACAAAGTCATGGCTGCTGT...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | GGTCCCAAGAGCTTCTTCAAGCCTTCTGTCCCCAGCTCCTCCCGTTaGCTCAGGGACTGGGGCTTGAGCAACTGCGGCCAGGTTATGTTC | + |
Preference number: 5 (lower is better) Translates to: GPKSFFKPSVPSSSR*LRDWGLSNCGQVMF Trigger: GAACATAACCTGGCCGCAGTTGCTCAAGCCCCAGTCCCTGAGGCAACGGGAGGAGCTGGGGACAGAAGGCTTGAAGAAGCTCTTGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | CGTCAGTCCCCGCTTAAGAGCAGTGTACACCAGGTCCAGCCTCTCTaGCTGCGGCACCTTGGGAGCTGGATGGGCCACAGAAAACATCCT | + |
Preference number: 5 (lower is better) Translates to: RQSPLKSSVHQVQPL*LRHLGSWMGHRKHP Trigger: AGGATGTTTTCTGTGGCCCATCCAGCTCCCAAGGTGCCGCAGCCAGAGAGGCTGGACCTGGTGTACACTGCTCTTAAGCGGGGACTGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | GGTCATGGCTGGCTCTTCATCCATGGAACCAGACGTGAGGCTCTCTaGCCTTCGGAAGGCAACTTGGACAGGCAGGGGCTCAGGCTGTTG | + |
Preference number: 5 (lower is better) Translates to: GHGWLFIHGTRREAL*PSEGNLDRQGLRLL Trigger: CAACAGCCTGAGCCCCTGCCTGTCCAAGTTGCCTTCCGAAGGCCAGAGAGCCTCACGTCTGGTTCCATGGATGAAGAGCCAGCCATGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | GTGGCTGAGAGTCCGGCTGTAAGGGGCATGCCCATTGACCAGGGATaGGGTCATGGCTGGCTCTTCATCCATGGAACCAGACGTGAGGCT | + |
Preference number: 5 (lower is better) Translates to: VAESPAVRGMPIDQG*GHGWLFIHGTRREA Trigger: AGCCTCACGTCTGGTTCCATGGATGAAGAGCCAGCCATGACCCCATCCCTGGTCAATGGGCATGCCCCTTACAGCCGGACTCTCAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | AGCCGGGCCGAGAGGCGGAGAACTGTACCACTTCCTGGGCAGATGTaGCAGAGTTCCCCCATAGCTTGCTGCGTTCACACACTTCCTGGA | + |
Preference number: 5 (lower is better) Translates to: SRAERRRTVPLPGQM*QSSPIACCVHTLPG Trigger: TCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTACAGTTCTCCGCCTCTCGGCCCGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | AAGGTCAGGAAGCCGGGCCGAGAGGCGGAGAACTGTACCACTTCCTaGGCAGATGTGGCAGAGTTCCCCCATAGCTTGCTGCGTTCACAC | + |
Preference number: 5 (lower is better) Translates to: KVRKPGREAENCTTS*ADVAEFPHSLLRSH Trigger: GTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTACAGTTCTCCGCCTCTCGGCCCGGCTTCCTGACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGCTGTCCCACACCTGCTaGCCACTACTCTCTATCCGG | + |
Preference number: 5 (lower is better) Translates to: AEPRLGGTSFQAFCQPQWLSHTC*PLLSIR Trigger: CCGGATAGAGAGTAGTGGCAAGCAGGTGTGGGACAG...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACAGCTTCTGTGTCTGTTaGGCACAAGTACACCAGGGG | + |
Preference number: 5 (lower is better) Translates to: GLRHCVWQRLCRTAAGRHSFCVC*AQVHQG Trigger: CCCCTGGTGTACTTGTGCCAAACAGACACAGAAGCT...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 90 bp | GGAATCTGGATAGACAAGCGGGCTAGGCCCTGGGATTGGGCTTTGTaGGTCCACAGCTTCCACGGCCTCAGTCAAGGCAGCATCCACGCT | + |
Preference number: 5 (lower is better) Translates to: GIWIDKRARPWDWAL*VHSFHGLSQGSIHA Trigger: AGCGTGGATGCTGCCTTGACTGAGGCCGTGGAAGCTGTGGACTCACAAAGCCCAATCCCAGGGCCTAGCCCGCTTGTCTATCCAGATTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | TGGGTGACTACAGGGCAGAGGTTCAGTGCCTGGGCCGGTGGATTCTaGAGAGGAGCTGGAGATTATAGCCACGTCTGTAGAAGGGGAGGG | + |
Preference number: 5 (lower is better) Translates to: WVTTGQRFSAWAGGF*RGAGDYSHVCRRGG Trigger: CCCTCCCCTTCTACAGACGTGGCTATAATCTCCAGCTCCTCTGCAGAATCCACCGGCCCAGGCACTGAACCTCTGCCCTGTAGTCACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | GTACCACTTCCTGGGCAGATGTGGCAGAGTTCCCCCATAGCTTGCTaGGTTCACACACTTCCTGGAATACACGCGCTTCCCGCAGCAGCC | + |
Preference number: 5 (lower is better) Translates to: VPLPGQMWQSSPIAC*VHTLPGIHALPAAA Trigger: GGCTGCTGCGGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | TACATAACTCCAGAATTGGAAGATGGTGAACTGCTCCCCCGGGCCTaGTTGGGGCCTCCTGGGCAGCTTCTGTCCCAGGGCATCTTCCAG | + |
Preference number: 5 (lower is better) Translates to: YITPELEDGELLPRA*LGPPGQLLSQGIFQ Trigger: CTGGAAGATGCCCTGGGACAGAAGCTGCCCAGGAGGCCCCAACCAGGCCCGGGGGAGCAGTTCACCATCTTCCAATTCTGGAGTTATGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | TGCAGGCTCTGCCGGGCGGCTTCCCTCACAGCTTCTGTGTCTGTTTaGCACAAGTACACCAGGGGCTCAATGCCCTCAGGAGCCTTGATA | + |
Preference number: 5 (lower is better) Translates to: CRLCRAASLTASVSV*HKYTRGSMPSGALI Trigger: TATCAAGGCTCCTGAGGGCATTGAGCCCCTGGTGTACTTGTGCCAAACAGACACAGAAGCTGTGAGGGAAGCCGCCCGGCAGAGCCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCTGTTGCACCAGAGGCTaGGGAGTTGAGTGTCGAGCT | + |
Preference number: 5 (lower is better) Translates to: PPCQCLMSPENKGRDTGSCCTRG*GVECRA Trigger: AGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACA...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | TGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCCGGCAAGCAGCCATGACTTTGTaGTTGCCGTGGACCAGCAGG | + |
Preference number: 5 (lower is better) Translates to: CQCLMSPENKGRDTGSRQAAMTL*LPWTSR Trigger: CCTGCTGGTCCACGGCAACAACAAAGTCATGGCTGC...TTGCCGGCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATATGCCCTCAGGAGCCTaGATACAGCCCAAAGCCAGG | + |
Preference number: 5 (lower is better) Translates to: FVGRGDWNQPSPSLPVPDMPSGA*IQPKAR Trigger: CCTGGCTTTGGGCTGTATCAAGGCTCCTGAGGGCAT...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 90 bp | AGAGCCCTTTCCCGGAAGACAGGACCAAGTGACAGGCTCCGAAGCTaGGTGCTGACAGCAGCCATGACTTTGTTGTTGCCGTGGACCAGC | + |
Preference number: 5 (lower is better) Translates to: RALSRKTGPSDRLRS*VLTAAMTLLLPWTS Trigger: GCTGGTCCACGGCAACAACAAAGTCATGGCTGCTGTCAGCACTCAGCTTCGGAGCCTGTCACTTGGTCCTGTCTTCCGGGAAAGGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | CCAAATGTGCCCAGTTTCAGCAGGAGGCGGCTGCAGTGGTACAGGTaGTGGACCAAGGTAGCATCCAGGGCTGAACACCCTGTGCTTAGA | + |
Preference number: 5 (lower is better) Translates to: PNVPSFSRRRLQWYR*WTKVASRAEHPVLR Trigger: TCTAAGCACAGGGTGTTCAGCCCTGGATGCTACCTTGGTCCAGCACCTGTACCACTGCAGCCGCCTCCTGCTGAAACTGGGCACATTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | CATCTTGGCTTCTTGAGTGGGACTAGTGGTACTGTGGCCGGAGCTTaGAGTAGTGCAGGTGGGACTTACAGTGGTATGGGTGGGGCTCGG | + |
Preference number: 5 (lower is better) Translates to: HLGFLSGTSGTVAGA*SSAGGTYSGMGGAR Trigger: CCGAGCCCCACCCATACCACTGTAAGTCCCACCTGCACTACTCCAAGCTCCGGCCACAGTACCACTAGTCCCACTCAAGAAGCCAAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | AATGTGCCCAGTTTCAGCAGGAGGCGGCTGCAGTGGTACAGGTGCTaGACCAAGGTAGCATCCAGGGCTGAACACCCTGTGCTTAGAGAC | + |
Preference number: 5 (lower is better) Translates to: NVPSFSRRRLQWYRC*TKVASRAEHPVLRD Trigger: GTCTCTAAGCACAGGGTGTTCAGCCCTGGATGCTACCTTGGTCCAGCACCTGTACCACTGCAGCCGCCTCCTGCTGAAACTGGGCACATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGCGGCAAACAGGTCCTaGGTCTCACAGGAGACACTG | + |
Preference number: 5 (lower is better) Translates to: LHPPCQCLMSPENKGRDTAANRS*VSQETL Trigger: CAGTGTCTCCTGTGAGACCAAGGACCTGTTTGCCGC...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | TGCACCAGAGGCTTGGGAGTTGAGTGTCGAGCTGTGCCAGAGAGCTaGGGGCTTGATGAATCATCTGACGATTCAGAGGACAGGGACCAG | + |
Preference number: 5 (lower is better) Translates to: CTRGLGVECRAVPES*GLDESSDDSEDRDQ Trigger: CTGGTCCCTGTCCTCTGAATCGTCAGATGATTCATCAAGCCCGCAGCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | GCTCAGGCTGTTGCACCAGAGGCTTGGGAGTTGAGTGTCGAGCTGTaGCAGAGAGCTGCGGGCTTGATGAATCATCTGACGATTCAGAGG | + |
Preference number: 5 (lower is better) Translates to: AQAVAPEAWELSVEL*QRAAGLMNHLTIQR Trigger: CCTCTGAATCGTCAGATGATTCATCAAGCCCGCAGCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACAGCCTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | ACTGTACCACTTCCTGGGCAGATGTGGCAGAGTTCCCCCATAGCTTaGTGCGTTCACACACTTCCTGGAATACACGCGCTTCCCGCAGCA | + |
Preference number: 5 (lower is better) Translates to: TVPLPGQMWQSSPIA*CVHTLPGIHALPAA Trigger: TGCTGCGGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTACAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATGTTGAGTCTGTTGCATaGGGAACAGAGCCTGTGGAG | + |
Preference number: 5 (lower is better) Translates to: FVGRGDWNQPSPSLPVPDVESVA*GTEPVE Trigger: CTCCACAGGCTCTGTTCCCAATGCAACAGACTCAAC...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | GGCCTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTCATCTTCATCATCATaGAGGAAGCTGAAGCTCTCC | + |
Preference number: 5 (lower is better) Translates to: GLRHCVWQRLCRTAAGRHSSSSS*RKLKLS Trigger: GGAGAGCTTCAGCTTCCTCAATGATGATGAAGATGA...GTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | GCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTCCCCGGGACCATCGTaGTCTTCATCTTCATCATCA | + |
Preference number: 5 (lower is better) Translates to: AEPRLGGTSFQAFCQPQWSPGPS*SSSSSS Trigger: TGATGATGAAGATGAAGACAACGATGGTCCCGGGGA...CCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 90 bp | GGGACCCAGTGCTATAGGCGCGGACCATGTTGTAGGCACCATCCCTaGGACGCCGCTGGACACAGTATGCTTCATACAACTCGTCAATCT | + |
Preference number: 5 (lower is better) Translates to: GTQCYRRGPCCRHHP*DAAGHSMLHTTRQS Trigger: AGATTGACGAGTTGTATGAAGCATACTGTGTCCAGCGGCGTCTCAGGGATGGTGCCTACAACATGGTCCGCGCCTATAGCACTGGGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 90 bp | GTCCAGGAAGCACAAGAGAGCCCTTTCCCGGAAGACAGGACCAAGTaGCAGGCTCCGAAGCTGAGTGCTGACAGCAGCCATGACTTTGTT | + |
Preference number: 5 (lower is better) Translates to: VQEAQESPFPEDRTK*QAPKLSADSSHDFV Trigger: AACAAAGTCATGGCTGCTGTCAGCACTCAGCTTCGGAGCCTGTCACTTGGTCCTGTCTTCCGGGAAAGGGCTCTCTTGTGCTTCCTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | AGGCGCCCCTCCGGTGCTAACCTTAGGGCTTTCAGCACAACGGCCTaGTCATCAGAGTTCAGGTTCTGTACTAGTAACACCTCCTCTGCA | + |
Preference number: 5 (lower is better) Translates to: RRPSGANLRAFSTTA*SSEFRFCTSNTSSA Trigger: TGCAGAGGAGGTGTTACTAGTACAGAACCTGAACTCTGATGACCAGGCCGTTGTGCTGAAAGCCCTAAGGTTAGCACCGGAGGGGCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | GTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCAAGGCGGGAATTCCTTTaGGACTCCTTTATCTGGCGC | + |
Preference number: 5 (lower is better) Translates to: VCGKDCAEPRLGGTSFQARREFL*DSFIWR Trigger: GCGCCAGATAAAGGAGTCCAAAAGGAATTCCCGCCT...TGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATCATGCAGATCTCATATaGATCGCCCACACACAGCCT | + |
Preference number: 5 (lower is better) Translates to: FVGRGDWNQPSPSLPVPDHADLI*IAHTQP Trigger: AGGCTGTGTGTGGGCGATCAATATGAGATCTGCATG...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | CCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTGGGAGCGTGACTGTGGAAGCTTaGTTGACTGTAGAAGCAGCT | + |
Preference number: 5 (lower is better) Translates to: PPCQCLMSPENKGRDTGSVTVEA*LTVEAA Trigger: AGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCAC...GCTCCCAGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | TTTGTGGGGAGAGGTGACTGGAACCAGCCTTCACCCTCCCTGCCAGTGCCTGATGCAGAATGGCCATTGTaGAGGACAGGCAGAACACTA | + |
Preference number: 5 (lower is better) Translates to: FVGRGDWNQPSPSLPVPDAEWPL*RTGRTL Trigger: TAGTGTTCTGCCTGTCCTCAACAATGGCCATTCTGC...ATCAGGCACTGGCAGGGAGGGTGAAGGCTGGTTCCAGTCACCTCTCCCCACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | ACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCCCTGGGTTGAGTCTGTaGCATTGGGAACAGAGCCTG | + |
Preference number: 5 (lower is better) Translates to: TLCVAKTVQNRGWEALHFPGLSL*HWEQSL Trigger: CAGGCTCTGTTCCCAATGCAACAGACTCAACCCAGG...GAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | CACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGCTTCGAGTCAGGCCTaGTCTCTGCATGAGCAGACT | + |
Preference number: 5 (lower is better) Translates to: HCVWQRLCRTAAGRHFISASSQA*SLHEQT Trigger: AGTCTGCTCATGCAGAGACAAGGCCTGACTCGAAGC...TGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | GGCCATTTGATGAGTCTAGTCTGTCCTCTGCCACAACCTCTGGGCTaGTTGTGTGCCTGTCCCCGGGACCATCGTTGTCTTCATCTTCAT | + |
Preference number: 5 (lower is better) Translates to: GHLMSLVCPLPQPLG*LCACPRDHRCLHLH Trigger: ATGAAGATGAAGACAACGATGGTCCCGGGGACAGGCACACAAGCAGCCCAGAGGTTGTGGCAGAGGACAGACTAGACTCATCAAATGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | AACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACCCACAGAAAACATCCTaGACACTCGGGAGAGCACTA | + |
Preference number: 5 (lower is better) Translates to: NRGWEALHFRHSANPSGNPQKTS*TLGRAL Trigger: TAGTGCTCTCCCGAGTGTCAAGGATGTTTTCTGTGG...GTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | CTCCGACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATGGACTTGACTTGCTaGTCCAAGTCATACAGGAAG | + |
Preference number: 5 (lower is better) Translates to: LRHCVWQRLCRTAAGRHFMDLTC*SKSYRK Trigger: CTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCAT...GAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | GAAGCCAGCCAGCCCTTTCATCCGGAGATGAAACTCGCCCAACTGTaGCTCCAGCTCATTCTCCAGAAGACACATGCTCTCTGTATACTC | + |
Preference number: 5 (lower is better) Translates to: EASQPFHPEMKLAQL*LQLILQKTHALCIL Trigger: GAGTATACAGAGAGCATGTGTCTTCTGGAGAATGAGCTGGAGGCACAGTTGGGCGAGTTTCATCTCCGGATGAAAGGGCTGGCTGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | GATGAGTCTAGTCTGTCCTCTGCCACAACCTCTGGGCTGCTTGTGTaGCTGTCCCCGGGACCATCGTTGTCTTCATCTTCATCATCATTG | + |
Preference number: 5 (lower is better) Translates to: DESSLSSATTSGLLV*LSPGPSLSSSSSSL Trigger: CAATGATGATGAAGATGAAGACAACGATGGTCCCGGGGACAGGCACACAAGCAGCCCAGAGGTTGTGGCAGAGGACAGACTAGACTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | TCTTCATCTTCATCATCATTGAGGAAGCTGAAGCTCTCCAGGGCATaGTCCACAGTGATGCTAAGACTGGAAGCCCGGCTTCGAGTCAGG | + |
Preference number: 5 (lower is better) Translates to: SSSSSSLRKLKLSRA*STVMLRLEARLRVR Trigger: CCTGACTCGAAGCCGGGCTTCCAGTCTTAGCATCACTGTGGAGCATGCCCTGGAGAGCTTCAGCTTCCTCAATGATGATGAAGATGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | CTTCACCCTCCCTGCCAGTGCCTGATGAGCCCTGAAAACAAGGGAAGGGACACTAAGCGTTCAATGGACTaGACTTGCTTGTCCAAGTCA | + |
Preference number: 5 (lower is better) Translates to: LHPPCQCLMSPENKGRDTKRSMD*TCLSKS Trigger: TGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTT...AGTGTCCCTTCCCTTGTTTTCAGGGCTCATCAGGCACTGGCAGGGAGGGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCACTTCTAGGCTTAGCTaGATGGTGCCAAGATCATTG | + |
Preference number: 5 (lower is better) Translates to: AKTVQNRGWEALHFRHSATSRLS*MVPRSL Trigger: CAATGATCTTGGCACCATCAAGCTAAGCCTAGAAGT...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | GCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCAACCCCAGTGGTAACAAAAGAAGGCTGGTCATCCTaGTCAAAGGGACTCCATATG | + |
Preference number: 5 (lower is better) Translates to: AAGRHFISGILPTPVVTKEGWSS*SKGLHM Trigger: CATATGGAGTCCCTTTGACAAGGATGACCAGCCTTC...TTTTGTTACCACTGGGGTTGGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | GACCATGTTGTAGGCACCATCCCTGAGACGCCGCTGGACACAGTATaGTTCATACAACTCGTCAATCTTACTGGCATGGAATTCCAGTCG | + |
Preference number: 5 (lower is better) Translates to: DHVVGTIPETPLDTV*FIQLVNLTGMEFQS Trigger: CGACTGGAATTCCATGCCAGTAAGATTGACGAGTTGTATGAAGCATACTGTGTCCAGCGGCGTCTCAGGGATGGTGCCTACAACATGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | GACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTTATGTGGAAAATCGCTaGGTGACTGTGGAAGCTTTG | + |
Preference number: 5 (lower is better) Translates to: DTVCGKDCAEPRLGGTSFYVENR*VTVEAL Trigger: CAAAGCTTCCACAGTCACCAAGCGATTTTCCACATA...AAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | GACACTGTGTGTGGCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTTTAGAGACTGGCCATTaGATGAGTCTAGTCTGTCCT | + |
Preference number: 5 (lower is better) Translates to: DTVCGKDCAEPRLGGTSFLETGH*MSLVCP Trigger: AGGACAGACTAGACTCATCAAATGGCCAGTCTCTAA...AAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGCCACACACAGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS-3UTR CAA 90 bp | GCAAAGACTGTGCAGAACCGCGGCTGGGAGGCACTTCATTTCAGGCATTCTGCCTACATAACTCCAGAATaGGAAGATGGTGAACTGCTC | + |
Preference number: 5 (lower is better) Translates to: AKTVQNRGWEALHFRHSAYITPE*EDGELL Trigger: GAGCAGTTCACCATCTTCCAATTCTGGAGTTATGTA...GGCAGAATGCCTGAAATGAAGTGCCTCCCAGCCGCGGTTCTGCACAGTCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 90 bp | TACTGGCATGGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGACTTaGCTTGCTTGTCCAAGTCATACAGGAAGCCTAGGCGGGAATTCC | + |
Preference number: 5 (lower is better) Translates to: YWHGIPVVEESVQWT*LACPSHTGSLGGNS Trigger: GGAATTCCCGCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGAATTCCATGCCAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 90 bp | GCATGGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGACTTGACTTaGTTGTCCAAGTCATACAGGAAGCCTAGGCGGGAATTCCTTTTG | + |
Preference number: 5 (lower is better) Translates to: AWNSSRRRKRSMDLT*LSKSYRKPRREFLL Trigger: CAAAAGGAATTCCCGCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGAATTCCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 90 bp | TTGGTGACTGTGGAAGCTTTGTTGACTGTAGAAGCAGCTGAAGGCTaGTCATCCTTGTCAAAGGGACTCCATATGACTTCTAGGCTTAGC | + |
Preference number: 5 (lower is better) Translates to: LVTVEALLTVEAAEG*SSLSKGLHMTSRLS Trigger: GCTAAGCCTAGAAGTCATATGGAGTCCCTTTGACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | CCGCGCTCGTGGCTGCCGAGGACGCCTGCGAAGGACTaGCTCCTACTGACCCGGGCGCTGAGCAGGCGGCGC | + |
Preference number: 6 (lower is better) Translates to: PRSWLPRTPAKD*LLLTRALSRRR Trigger: GCGCCGCCTGCTCAGCGCCCGGGTCAGTAGGAGCCAGTCCTTCGCAGGCGTCCTCGGCAGCCACGAGCGCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | GGCCTCGGCCAGGCTGTCTCGGGCCTCTCGACTCCCTaGGGACCCAGTGCTATAGGCGCGGACCATGTTGTA | + |
Preference number: 6 (lower is better) Translates to: GLGQAVSGLSTP*GPSAIGADHVV Trigger: TACAACATGGTCCGCGCCTATAGCACTGGGTCCCCAGGGAGTCGAGAGGCCCGAGACAGCCTGGCCGAGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | AAGCCTGGCTGGCGCAGGGAAAGACGGGCACCGTACTaGCTGCAGAAGGTGAGGAGCACCCGCTCCACAGAG | + |
Preference number: 6 (lower is better) Translates to: KPGWRRERRAPY*LQKVRSTRSTE Trigger: CTCTGTGGAGCGGGTGCTCCTCACCTTCTGCAGCCAGTACGGTGCCCGTCTTTCCCTGCGCCAGCCAGGCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | GAGGGGAGGCTGGGTGACTACAGGGCAGAGGTTCAGTaGCTGGGCCGGTGGATTCTGCAGAGGAGCTGGAGA | + |
Preference number: 6 (lower is better) Translates to: EGRLGDYRAEVQ*LGRWILQRSWR Trigger: TCTCCAGCTCCTCTGCAGAATCCACCGGCCCAGGCACTGAACCTCTGCCCTGTAGTCACCCAGCCTCCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 72 bp | GCAGGGGCTCAGGCTGTTGCACCAGAGGCTTGGGAGTaGAGTGTCGAGCTGTGCCAGAGAGCTGCGGGCTTG | + |
Preference number: 6 (lower is better) Translates to: AGAQAVAPEAWE*SVELCQRAAGL Trigger: CAAGCCCGCAGCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 72 bp | CAGGGCAGAGCATCCAGGGACTCCTCTAGCTGTCGATaGGCAGACTGTCCTTCCTCCCCGCACTGCTGCAGG | + |
Preference number: 6 (lower is better) Translates to: QGRASRDSSSCR*ADCPSSPHCCR Trigger: CCTGCAGCAGTGCGGGGAGGAAGGACAGTCTGCTCATCGACAGCTAGAGGAGTCCCTGGATGCTCTGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | CCGCTTAAGAGCAGTGTACACCAGGTCCAGCCTCTCTaGCTGCGGCACCTTGGGAGCTGGATGGGCCACAGA | + |
Preference number: 6 (lower is better) Translates to: PLKSSVHQVQPL*LRHLGSWMGHR Trigger: TCTGTGGCCCATCCAGCTCCCAAGGTGCCGCAGCCAGAGAGGCTGGACCTGGTGTACACTGCTCTTAAGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | GACACATGCTCTCTGTATACTCTCGATGGCCTCGAGTaGCCTCGGCCAGGCTGTCTCGGGCCTCTCGACTCC | + |
Preference number: 6 (lower is better) Translates to: DTCSLYTLDGLE*PRPGCLGPLDS Trigger: GGAGTCGAGAGGCCCGAGACAGCCTGGCCGAGGCCACTCGAGGCCATCGAGAGTATACAGAGAGCATGTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | CAGCCACAACCTGGGGCAGGGCGGCAAACAGGTCCTTaGTCTCACAGGAGACACTGCCCACGACTACGTGGT | + |
Preference number: 6 (lower is better) Translates to: QPQPGAGRQTGP*SHRRHCPRLRG Trigger: ACCACGTAGTCGTGGGCAGTGTCTCCTGTGAGACCAAGGACCTGTTTGCCGCCCTGCCCCAGGTTGTGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | AGGAACTTCACACACACAGCCTCGGCTAAGCCTGGCTaGCGCAGGGAAAGACGGGCACCGTACTGGCTGCAG | + |
Preference number: 6 (lower is better) Translates to: RNFTHTASAKPG*RRERRAPYWLQ Trigger: CTGCAGCCAGTACGGTGCCCGTCTTTCCCTGCGCCAGCCAGGCTTAGCCGAGGCTGTGTGTGTGAAGTTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | CCGGCCACTCGAGTCTGCACGTCCCCATCTTCCAGCTaGTCCAGGAAGCACAAGAGAGCCCTTTCCCGGAAG | + |
Preference number: 6 (lower is better) Translates to: PATRVCTSPSSS*SRKHKRALSRK Trigger: CTTCCGGGAAAGGGCTCTCTTGTGCTTCCTGGACCAGCTGGAAGATGGGGACGTGCAGACTCGAGTGGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | CGGAAGGCAACTTGGACAGGCAGGGGCTCAGGCTGTTaGACCAGAGGCTTGGGAGTTGAGTGTCGAGCTGTG | + |
Preference number: 6 (lower is better) Translates to: RKATWTGRGSGC*TRGLGVECRAV Trigger: CACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCTGCCTGTCCAAGTTGCCTTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | AAGCCGGGCCGAGAGGCGGAGAACTGTACCACTTCCTaGGCAGATGTGGCAGAGTTCCCCCATAGCTTGCTG | + |
Preference number: 6 (lower is better) Translates to: KPGREAENCTTS*ADVAEFPHSLL Trigger: CAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTACAGTTCTCCGCCTCTCGGCCCGGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | ACAGAGCAGATGAAGGGGCTGAGTCCCTCTGTACACTaGTCCCAAAAGGTCAGGAAGCCGGGCCGAGAGGCG | + |
Preference number: 6 (lower is better) Translates to: TEQMKGLSPSVH*SQKVRKPGREA Trigger: CGCCTCTCGGCCCGGCTTCCTGACCTTTTGGGACCAGTGTACAGAGGGACTCAGCCCCTTCATCTGCTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 72 bp | CTGCCGGGCGGCTTCCCTCACAGCTTCTGTGTCTGTTaGGCACAAGTACACCAGGGGCTCAATGCCCTCAGG | + |
Preference number: 6 (lower is better) Translates to: LPGGFPHSFCVC*AQVHQGLNALR Trigger: CCTGAGGGCATTGAGCCCCTGGTGTACTTGTGCCAAACAGACACAGAAGCTGTGAGGGAAGCCGCCCGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | GCGGGGCCAGTTGTACTGAGGGCGGGACTTGTGGCAGAATGGCCATaGTTGAGGACAGGCAGAACACTACTGACACGCTCCACGTGGGTG | + |
Preference number: 6 (lower is better) Translates to: AGPVVLRAGLVAEWP*LRTGRTLLTRSTWV Trigger: CACCCACGTGGAGCGTGTCAGTAGTGTTCTGCCTGTCCTCAACAATGGCCATTCTGCCACAAGTCCCGCCCTCAGTACAACTGGCCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | GGGTCCCAAGAGCTTCTTCAAGCCTTCTGTCCCCAGCTCCTCCCGTaGCCTCAGGGACTGGGGCTTGAGCAACTGCGGCCAGGTTATGTT | + |
Preference number: 6 (lower is better) Translates to: GSQELLQAFCPQLLP*PQGLGLEQLRPGYV Trigger: AACATAACCTGGCCGCAGTTGCTCAAGCCCCAGTCCCTGAGGCAACGGGAGGAGCTGGGGACAGAAGGCTTGAAGAAGCTCTTGGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | CTGCAGGCTCTGCCGGGCGGCTTCCCTCACAGCTTCTGTGTCTGTTaGGCACAAGTACACCAGGGGCTCAATGCCCTCAGGAGCCTTGAT | + |
Preference number: 6 (lower is better) Translates to: LQALPGGFPHSFCVC*AQVHQGLNALRSLD Trigger: ATCAAGGCTCCTGAGGGCATTGAGCCCCTGGTGTACTTGTGCCAAACAGACACAGAAGCTGTGAGGGAAGCCGCCCGGCAGAGCCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 72 bp | ATAGACAAGCGGGCTAGGCCCTGGGATTGGGCTTTGTaGGTCCACAGCTTCCACGGCCTCAGTCAAGGCAGC | + |
Preference number: 6 (lower is better) Translates to: IDKRARPWDWAL*VHSFHGLSQGS Trigger: GCTGCCTTGACTGAGGCCGTGGAAGCTGTGGACTCACAAAGCCCAATCCCAGGGCCTAGCCCGCTTGTCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 72 bp | ACAAGTACACCAGGGGCTCAATGCCCTCAGGAGCCTTaGTACAGCCCAAAGCCAGGCATCCGGCCACTCGAG | + |
Preference number: 6 (lower is better) Translates to: TSTPGAQCPQEP*YSPKPGIRPLE Trigger: CTCGAGTGGCCGGATGCCTGGCTTTGGGCTGTATCAAGGCTCCTGAGGGCATTGAGCCCCTGGTGTACTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | TTCTCCAGAAGACACATGCTCTCTGTATACTCTCGATaGCCTCGAGTGGCCTCGGCCAGGCTGTCTCGGGCC | + |
Preference number: 6 (lower is better) Translates to: FSRRHMLSVYSR*PRVASARLSRA Trigger: GGCCCGAGACAGCCTGGCCGAGGCCACTCGAGGCCATCGAGAGTATACAGAGAGCATGTGTCTTCTGGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | TGGCTCTTCATCCATGGAACCAGACGTGAGGCTCTCTaGCCTTCGGAAGGCAACTTGGACAGGCAGGGGCTC | + |
Preference number: 6 (lower is better) Translates to: WLFIHGTRREAL*PSEGNLDRQGL Trigger: GAGCCCCTGCCTGTCCAAGTTGCCTTCCGAAGGCCAGAGAGCCTCACGTCTGGTTCCATGGATGAAGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | AGGGGCATGCCCATTGACCAGGGATGGGGTCATGGCTaGCTCTTCATCCATGGAACCAGACGTGAGGCTCTC | + |
Preference number: 6 (lower is better) Translates to: RGMPIDQGWGHG*LFIHGTRREAL Trigger: GAGAGCCTCACGTCTGGTTCCATGGATGAAGAGCCAGCCATGACCCCATCCCTGGTCAATGGGCATGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | GAGTTCCCCCATAGCTTGCTGCGTTCACACACTTCCTaGAATACACGCGCTTCCCGCAGCAGCCGTTCCAGG | + |
Preference number: 6 (lower is better) Translates to: EFPHSLLRSHTS*NTRASRSSRSR Trigger: CCTGGAACGGCTGCTGCGGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | TGCCGGGCGGCTTCCCTCACAGCTTCTGTGTCTGTTTaGCACAAGTACACCAGGGGCTCAATGCCCTCAGGA | + |
Preference number: 6 (lower is better) Translates to: CRAASLTASVSV*HKYTRGSMPSG Trigger: TCCTGAGGGCATTGAGCCCCTGGTGTACTTGTGCCAAACAGACACAGAAGCTGTGAGGGAAGCCGCCCGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 72 bp | CACAAGTACACCAGGGGCTCAATGCCCTCAGGAGCCTaGATACAGCCCAAAGCCAGGCATCCGGCCACTCGA | + |
Preference number: 6 (lower is better) Translates to: HKYTRGSMPSGA*IQPKARHPATR Trigger: TCGAGTGGCCGGATGCCTGGCTTTGGGCTGTATCAAGGCTCCTGAGGGCATTGAGCCCCTGGTGTACTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | CTTGGACAGGCAGGGGCTCAGGCTGTTGCACCAGAGGCTTGGGAGTaGAGTGTCGAGCTGTGCCAGAGAGCTGCGGGCTTGATGAATCAT | + |
Preference number: 6 (lower is better) Translates to: LGQAGAQAVAPEAWE*SVELCQRAAGLMNH Trigger: ATGATTCATCAAGCCCGCAGCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAACAGCCTGAGCCCCTGCCTGTCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | GGGCCAGTTGTACTGAGGGCGGGACTTGTGGCAGAATGGCCATTGTaGAGGACAGGCAGAACACTACTGACACGCTCCACGTGGGTGGAA | + |
Preference number: 6 (lower is better) Translates to: GPVVLRAGLVAEWPL*RTGRTLLTRSTWVE Trigger: TTCCACCCACGTGGAGCGTGTCAGTAGTGTTCTGCCTGTCCTCAACAATGGCCATTCTGCCACAAGTCCCGCCCTCAGTACAACTGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 72 bp | CCAAGGCTTCTACATAACTCCAGAATTGGAAGATGGTaGACTGCTCCCCCGGGCCTGGTTGGGGCCTCCTGG | + |
Preference number: 6 (lower is better) Translates to: PRLLHNSRIGRW*TAPPGLVGASW Trigger: CCAGGAGGCCCCAACCAGGCCCGGGGGAGCAGTTCACCATCTTCCAATTCTGGAGTTATGTAGAAGCCTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | TTAAGAGCAGTGTACACCAGGTCCAGCCTCTCTGGCTaGGGCACCTTGGGAGCTGGATGGGCCACAGAAAAC | + |
Preference number: 6 (lower is better) Translates to: LRAVYTRSSLSG*GTLGAGWATEN Trigger: GTTTTCTGTGGCCCATCCAGCTCCCAAGGTGCCGCAGCCAGAGAGGCTGGACCTGGTGTACACTGCTCTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | CCTGGGCAGATGTGGCAGAGTTCCCCCATAGCTTGCTaGGTTCACACACTTCCTGGAATACACGCGCTTCCC | + |
Preference number: 6 (lower is better) Translates to: PGQMWQSSPIAC*VHTLPGIHALP Trigger: GGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | GAGCCTGTGGAGGTGAGGGGAGAGGGCGTGGTTGTGTaGGCAGAACCTATAGTGGTGGAAGTTAGGCTTGGA | + |
Preference number: 6 (lower is better) Translates to: EPVEVRGEGVVV*AEPIVVEVRLG Trigger: TCCAAGCCTAACTTCCACCACTATAGGTTCTGCCCACACAACCACGCCCTCTCCCCTCACCTCCACAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | GGGCTCGGGGAGCTATGTGTAGGGCTTACAGTGGTGTaGGTGAGGCGTATAGTAGTATGGGTAGGGCTTGGG | + |
Preference number: 6 (lower is better) Translates to: GLGELCVGLTVV*VRRIVVWVGLG Trigger: CCCAAGCCCTACCCATACTACTATACGCCTCACCCACACCACTGTAAGCCCTACACATAGCTCCCCGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | AACTGTACCACTTCCTGGGCAGATGTGGCAGAGTTCCCCCATAGCTaGCTGCGTTCACACACTTCCTGGAATACACGCGCTTCCCGCAGC | + |
Preference number: 6 (lower is better) Translates to: NCTTSWADVAEFPHS*LRSHTSWNTRASRS Trigger: GCTGCGGGAAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTACAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 72 bp | TGGGGTACTGTGAGTAGGGCTTGGGGTAGCCTGGGTTaGGTCTGTTGCATTGGGAACAGAGCCTGTGGAGGT | + |
Preference number: 6 (lower is better) Translates to: WGTVSRAWGSLG*VCCIGNRACGG Trigger: ACCTCCACAGGCTCTGTTCCCAATGCAACAGACTCAACCCAGGCTACCCCAAGCCCTACTCACAGTACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 72 bp | TCCCGGAAGACAGGACCAAGTGACAGGCTCCGAAGCTaGGTGCTGACAGCAGCCATGACTTTGTTGTTGCCG | + |
Preference number: 6 (lower is better) Translates to: SRKTGPSDRLRS*VLTAAMTLLLP Trigger: CGGCAACAACAAAGTCATGGCTGCTGTCAGCACTCAGCTTCGGAGCCTGTCACTTGGTCCTGTCTTCCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | GTTGCACCAGAGGCTTGGGAGTTGAGTGTCGAGCTGTaGCAGAGAGCTGCGGGCTTGATGAATCATCTGACG | + |
Preference number: 6 (lower is better) Translates to: VAPEAWELSVEL*QRAAGLMNHLT Trigger: CGTCAGATGATTCATCAAGCCCGCAGCTCTCTGGCACAGCTCGACACTCAACTCCCAAGCCTCTGGTGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | ACAGGGCAGAGGTTCAGTGCCTGGGCCGGTGGATTCTaGAGAGGAGCTGGAGATTATAGCCACGTCTGTAGA | + |
Preference number: 6 (lower is better) Translates to: TGQRFSAWAGGF*RGAGDYSHVCR Trigger: TCTACAGACGTGGCTATAATCTCCAGCTCCTCTGCAGAATCCACCGGCCCAGGCACTGAACCTCTGCCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | AGTCTGTCCTCTGCCACAACCTCTGGGCTGCTTGTGTaGCTGTCCCCGGGACCATCGTTGTCTTCATCTTCA | + |
Preference number: 6 (lower is better) Translates to: SLSSATTSGLLV*LSPGPSLSSSS Trigger: TGAAGATGAAGACAACGATGGTCCCGGGGACAGGCACACAAGCAGCCCAGAGGTTGTGGCAGAGGACAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | GAGAGGCGGAGAACTGTACCACTTCCTGGGCAGATGTaGCAGAGTTCCCCCATAGCTTGCTGCGTTCACACA | + |
Preference number: 6 (lower is better) Translates to: ERRRTVPLPGQM*QSSPIACCVHT Trigger: TGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGTGGTACAGTTCTCCGCCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | GAAGAAAGACGGTCTCTTCACTGTCCCACACCTGCTTaGCACTACTCTCTATCCGGCCTCGCAACTTCCAGC | + |
Preference number: 6 (lower is better) Translates to: EERRSLHCPTPA*HYSLSGLATSS Trigger: GCTGGAAGTTGCGAGGCCGGATAGAGAGTAGTGGCAAGCAGGTGTGGGACAGTGAAGAGACCGTCTTTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | AAGACTCTGGTAAGAGGTGCAGGAAGCTGTGGGGTCTaGTTTAGTGTAGGGAGGGGAGGCTGGGTGACTACA | + |
Preference number: 6 (lower is better) Translates to: KTLVRGAGSCGV*FSVGRGGWVTT Trigger: TGTAGTCACCCAGCCTCCCCTCCCTACACTAAAGCAGACCCCACAGCTTCCTGCACCTCTTACCAGAGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | CTTCCTGGGCAGATGTGGCAGAGTTCCCCCATAGCTTaGTGCGTTCACACACTTCCTGGAATACACGCGCTT | + |
Preference number: 6 (lower is better) Translates to: LPGQMWQSSPIA*CVHTLPGIHAL Trigger: AAGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | GCCTGTTCTCGGAGTGAGGGTGTGTCTGGCGGGCTCTaGCTATATGTGGAAAATCGCTTGGTGACTGTGGAA | + |
Preference number: 6 (lower is better) Translates to: ACSRSEGVSGGL*LYVENRLVTVE Trigger: TTCCACAGTCACCAAGCGATTTTCCACATATAGCCAGAGCCCGCCAGACACACCCTCACTCCGAGAACAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 72 bp | GTTGTACTGAGGGCGGGACTTGTGGCAGAATGGCCATaGTTGAGGACAGGCAGAACACTACTGACACGCTCC | + |
Preference number: 6 (lower is better) Translates to: VVLRAGLVAEWP*LRTGRTLLTRS Trigger: GGAGCGTGTCAGTAGTGTTCTGCCTGTCCTCAACAATGGCCATTCTGCCACAAGTCCCGCCCTCAGTACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 72 bp | ACTTCCTGGGCAGATGTGGCAGAGTTCCCCCATAGCTaGCTGCGTTCACACACTTCCTGGAATACACGCGCT | + |
Preference number: 6 (lower is better) Translates to: TSWADVAEFPHS*LRSHTSWNTRA Trigger: AGCGCGTGTATTCCAGGAAGTGTGTGAACGCAGCAAGCTATGGGGGAACTCTGCCACATCTGCCCAGGAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 72 bp | TGCTATAGGCGCGGACCATGTTGTAGGCACCATCCCTaGGACGCCGCTGGACACAGTATGCTTCATACAACT | + |
Preference number: 6 (lower is better) Translates to: CYRRGPCCRHHP*DAAGHSMLHTT Trigger: AGTTGTATGAAGCATACTGTGTCCAGCGGCGTCTCAGGGATGGTGCCTACAACATGGTCCGCGCCTATAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | CAGCCCTTTCATCCGGAGATGAAACTCGCCCAACTGTaGCTCCAGCTCATTCTCCAGAAGACACATGCTCTC | + |
Preference number: 6 (lower is better) Translates to: QPFHPEMKLAQL*LQLILQKTHAL Trigger: GAGAGCATGTGTCTTCTGGAGAATGAGCTGGAGGCACAGTTGGGCGAGTTTCATCTCCGGATGAAAGGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 72 bp | CCAGGGCTGAACACCCTGTGCTTAGAGACTGGCCATTaGATGAGTCTAGTCTGTCCTCTGCCACAACCTCTG | + |
Preference number: 6 (lower is better) Translates to: PGLNTLCLETGH*MSLVCPLPQPL Trigger: CAGAGGTTGTGGCAGAGGACAGACTAGACTCATCAAATGGCCAGTCTCTAAGCACAGGGTGTTCAGCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | GGACTCCATATGACTTCTAGGCTTAGCTTGATGGTGCCAAGATCATaGATATCCACAGCCACAACCTGGGGCAGGGCGGCAAACAGGTCC | + |
Preference number: 6 (lower is better) Translates to: GLHMTSRLSLMVPRS*ISTATTWGRAANRS Trigger: GGACCTGTTTGCCGCCCTGCCCCAGGTTGTGGCTGTGGATATCAATGATCTTGGCACCATCAAGCTAAGCCTAGAAGTCATATGGAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 72 bp | ATGACTTCTAGGCTTAGCTTGATGGTGCCAAGATCATaGATATCCACAGCCACAACCTGGGGCAGGGCGGCA | + |
Preference number: 6 (lower is better) Translates to: MTSRLSLMVPRS*ISTATTWGRAA Trigger: TGCCGCCCTGCCCCAGGTTGTGGCTGTGGATATCAATGATCTTGGCACCATCAAGCTAAGCCTAGAAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | AGTGAGGGTGTGTCTGGCGGGCTCTGGCTATATGTGGAAAATCGCTaGGTGACTGTGGAAGCTTTGTTGACTGTAGAAGCAGCTGAAGGC | + |
Preference number: 6 (lower is better) Translates to: SEGVSGGLWLYVENR*VTVEALLTVEAAEG Trigger: GCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCACCAAGCGATTTTCCACATATAGCCAGAGCCCGCCAGACACACCCTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | GTAGGCACCATCCCTGAGACGCCGCTGGACACAGTATaGTTCATACAACTCGTCAATCTTACTGGCATGGAA | + |
Preference number: 6 (lower is better) Translates to: VGTIPETPLDTV*FIQLVNLTGME Trigger: TTCCATGCCAGTAAGATTGACGAGTTGTATGAAGCATACTGTGTCCAGCGGCGTCTCAGGGATGGTGCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | TCCGGTGCTAACCTTAGGGCTTTCAGCACAACGGCCTaGTCATCAGAGTTCAGGTTCTGTACTAGTAACACC | + |
Preference number: 6 (lower is better) Translates to: SGANLRAFSTTA*SSEFRFCTSNT Trigger: GGTGTTACTAGTACAGAACCTGAACTCTGATGACCAGGCCGTTGTGCTGAAAGCCCTAAGGTTAGCACCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS GCA 72 bp | TCCAGTCGTCGAAGAAAGCGTTCAATGGACTTGACTTaGTTGTCCAAGTCATACAGGAAGCCTAGGCGGGAA | + |
Preference number: 6 (lower is better) Translates to: SSRRRKRSMDLT*LSKSYRKPRRE Trigger: TTCCCGCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | TCCTTGGTCTCACAGGAGACACTGCCCACGACTACGTaGTTAGCCAGTCCCTTTAATTCTGTCACCTTGATA | + |
Preference number: 6 (lower is better) Translates to: SLVSQETLPTTT*LASPFNSVTLI Trigger: TATCAAGGTGACAGAATTAAAGGGACTGGCTAACCACGTAGTCGTGGGCAGTGTCTCCTGTGAGACCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 72 bp | GTGTCTGGCGGGCTCTGGCTATATGTGGAAAATCGCTaGGTGACTGTGGAAGCTTTGTTGACTGTAGAAGCA | + |
Preference number: 6 (lower is better) Translates to: VSGGLWLYVENR*VTVEALLTVEA Trigger: TGCTTCTACAGTCAACAAAGCTTCCACAGTCACCAAGCGATTTTCCACATATAGCCAGAGCCCGCCAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | TGGTCATCCTTGTCAAAGGGACTCCATATGACTTCTAGGCTTAGCTaGATGGTGCCAAGATCATTGATATCCACAGCCACAACCTGGGGC | + |
Preference number: 6 (lower is better) Translates to: WSSLSKGLHMTSRLS*MVPRSLISTATTWG Trigger: GCCCCAGGTTGTGGCTGTGGATATCAATGATCTTGGCACCATCAAGCTAAGCCTAGAAGTCATATGGAGTCCCTTTGACAAGGATGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | GGGCTCTGGCTATATGTGGAAAATCGCTTGGTGACTGTGGAAGCTTaGTTGACTGTAGAAGCAGCTGAAGGCTGGTCATCCTTGTCAAAG | + |
Preference number: 6 (lower is better) Translates to: GLWLYVENRLVTVEA*LTVEAAEGWSSLSK Trigger: CTTTGACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCACCAAGCGATTTTCCACATATAGCCAGAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 72 bp | GGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGACTTaGCTTGCTTGTCCAAGTCATACAGGAAGCCTAGGC | + |
Preference number: 6 (lower is better) Translates to: GIPVVEESVQWT*LACPSHTGSLG Trigger: GCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGAATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS TCA 72 bp | GGTGACTGTGGAAGCTTTGTTGACTGTAGAAGCAGCTaGAGGCTGGTCATCCTTGTCAAAGGGACTCCATAT | + |
Preference number: 6 (lower is better) Translates to: GDCGSFVDCRSS*RLVILVKGTPY Trigger: ATATGGAGTCCCTTTGACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 72 bp | AGTCGTCGAAGAAAGCGTTCAATGGACTTGACTTGCTaGTCCAAGTCATACAGGAAGCCTAGGCGGGAATTC | + |
Preference number: 6 (lower is better) Translates to: SRRRKRSMDLTC*SKSYRKPRREF Trigger: GAATTCCCGCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | TGGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGACTTGACTTGCTaGTCCAAGTCATACAGGAAGCCTAGGCGGGAATTCCTTTTGGAC | + |
Preference number: 6 (lower is better) Translates to: WNSSRRRKRSMDLTC*SKSYRKPRREFLLD Trigger: GTCCAAAAGGAATTCCCGCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGAATTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | TTACTGGCATGGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGACTaGACTTGCTTGTCCAAGTCATACAGGAAGCCTAGGCGGGAATTC | + |
Preference number: 6 (lower is better) Translates to: LLAWNSSRRRKRSMD*TCLSKSYRKPRREF Trigger: GAATTCCCGCCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGAATTCCATGCCAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 90 bp | CTCTGGCTATATGTGGAAAATCGCTTGGTGACTGTGGAAGCTTTGTaGACTGTAGAAGCAGCTGAAGGCTGGTCATCCTTGTCAAAGGGA | + |
Preference number: 6 (lower is better) Translates to: LWLYVENRLVTVEAL*TVEAAEGWSSLSKG Trigger: TCCCTTTGACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCACCAAGCGATTTTCCACATATAGCCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | GTGGAAGCTTTGTTGACTGTAGAAGCAGCTGAAGGCTaGTCATCCTTGTCAAAGGGACTCCATATGACTTCT | + |
Preference number: 6 (lower is better) Translates to: VEALLTVEAAEG*SSLSKGLHMTS Trigger: AGAAGTCATATGGAGTCCCTTTGACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 72 bp | TGGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGACTaGACTTGCTTGTCCAAGTCATACAGGAAGCCTAGG | + |
Preference number: 6 (lower is better) Translates to: WNSSRRRKRSMD*TCLSKSYRKPR Trigger: CCTAGGCTTCCTGTATGACTTGGACAAGCAAGTCAAGTCCATTGAACGCTTTCTTCGACGACTGGAATTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 72 bp | TTGTTGACTGTAGAAGCAGCTGAAGGCTGGTCATCCTaGTCAAAGGGACTCCATATGACTTCTAGGCTTAGC | + |
Preference number: 6 (lower is better) Translates to: LLTVEAAEGWSS*SKGLHMTSRLS Trigger: GCTAAGCCTAGAAGTCATATGGAGTCCCTTTGACAAGGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CAA 72 bp | CTATATGTGGAAAATCGCTTGGTGACTGTGGAAGCTTaGTTGACTGTAGAAGCAGCTGAAGGCTGGTCATCC | + |
Preference number: 6 (lower is better) Translates to: LYVENRLVTVEA*LTVEAAEGWSS Trigger: GGATGACCAGCCTTCAGCTGCTTCTACAGTCAACAAAGCTTCCACAGTCACCAAGCGATTTTCCACATATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |
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CDS CCA 72 bp | CAGTATGCTTCATACAACTCGTCAATCTTACTGGCATaGAATTCCAGTCGTCGAAGAAAGCGTTCAATGGAC | + |
Preference number: 6 (lower is better) Translates to: QYASYNSSILLA*NSSRRRKRSMD Trigger: GTCCATTGAACGCTTTCTTCGACGACTGGAATTCCATGCCAGTAAGATTGACGAGTTGTATGAAGCATACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043531.10 |