Pregenerated sensors for RIPK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022221Ensembl transcript IDs: ENSMUST00000022830.14, ENSMUST00000168716.8, ENSMUST00000178399.3, ENSMUST00000228326.2, ENSMUST00000228476.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTaGGCTTCAGGAAGTGGCAAGGACTGTCTTAGCCAGTCCAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: KSQFGCRSNCPHRML*ASGSGKDCLSQSRL Trigger: CAACCTGGACTGGCTAAGACAGTCCTTGCCACTTCCTGAAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| 3UTR-3UTR GCA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTAAACGTGCTTTTTATTaGCACGCTGAATGGCACACT | + |
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Preference number: 2 (lower is better) Translates to: SRVSLGVGPTVLTECCELKRAFY*HAEWHT Trigger: AGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTT...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| 3UTR TCA 72 bp | TTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTaGGCTTCAGGAAGTGGCAAGGACTGTCTTAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: FGCRSNCPHRML*ASGSGKDCLSQ Trigger: CTGGCTAAGACAGTCCTTGCCACTTCCTGAAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| 3UTR GCA 72 bp | CAGGAAGTGGCAAGGACTGTCTTAGCCAGTCCAGGTTaGTTAAAACGTGCTTTTTATTGCCACGCTGAATGG | + |
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Preference number: 3 (lower is better) Translates to: QEVARTVLASPG*LKRAFYCHAEW Trigger: CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGACAGTCCTTGCCACTTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTCAGGCGACAGAGGAGTaGCCAGGGCCGAGGGCACTC | + |
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Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSQATEE*PGPRAL Trigger: GAGTGCCCTCGGCCCTGGCCACTCCTCTGTCGCCTG...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGCAGGCGACAGAGGAGTaGCCAGGGCCGAGGGCACTC | + |
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Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWQATEE*PGPRAL Trigger: GAGTGCCCTCGGCCCTGGCCACTCCTCTGTCGCCTG...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTGGCTTGAGGTCCCGGTaGAGGAGCGGAGGGTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSGLRSR*RSGGFK Trigger: CTTGAACCCTCCGCTCCTGCACCGGGACCTCAAGCC...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTCAGGCGACAGAGGAGTaGCCAGGGCCGAGGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSQATEE*PGPRAL Trigger: GAGTGCCCTCGGCCCTGGCCACTCCTCTGTCGCCTG...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTGGGTTGCAGCAGCCCTaGGAGGGAGCCATTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSGLQQP*EGAILH Trigger: ATGGAGAATGGCTCCCTCGCAGGGCTGCTGCAACCC...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTCCCAGCACCACTTCCTaGAGCAGGCGACAGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSPSTTS*SRRQRS Trigger: ACTCCTCTGTCGCCTGCTGCAGGAAGTGGTGCTGGG...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGGGCTTGAGGTCCCGGTaGAGGAGCGGAGGGTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWGLRSR*RSGGFK Trigger: CTTGAACCCTCCGCTCCTGCACCGGGACCTCAAGCC...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR TCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGACTGGAGGTCCTCAGTaGCCCCCAGCAGGAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWTGGPQ*PPAGAE Trigger: TTCTGCTCCTGCTGGGGGTCACTGAGGACCTCCAGT...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR TCA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTACTGGAGGTCCTCAGTaGCCCCCAGCAGGAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SRVSLGVGPTVLTECCELTGGPQ*PPAGAE Trigger: TTCTGCTCCTGCTGGGGGTCACTGAGGACCTCCAGT...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTCCCAGCACCACTTCCTaGAGCAGGCGACAGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SRVSLGVGPTVLTECCELPSTTS*SRRQRS Trigger: ACTCCTCTGTCGCCTGCTGCAGGAAGTGGTGCTGGG...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTCCAAGTACGCTAGGGTaGCCCCAGAGTCCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SRVSLGVGPTVLTECCELPSTLG*PQSPWI Trigger: GATCCAGGGACTCTGGGGGCACCCTAGCGTACTTGG...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTAGTCTCAGGGCTACCTaGAGGCAGCTCTGTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSSLRAT*RQLCQW Trigger: CCACTGACAGAGCTGCCTCCAGGTAGCCCTGAGACT...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGGGTTGCAGCAGCCCTaGGAGGGAGCCATTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSGLQQP*EGAILH Trigger: ATGGAGAATGGCTCCCTCGCAGGGCTGCTGCAACCC...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTCCCAGCACCACTTCCTaGAGCAGGCGACAGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSPSTTS*SRRQRS Trigger: ACTCCTCTGTCGCCTGCTGCAGGAAGTGGTGCTGGG...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTCCAACTCAGCTTCTCTaGCAGCCAGCACTGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SRVSLGVGPTVLTECCELPTQLL*QPALPT Trigger: TGTGGGCAGTGCTGGCTGGCAGAGAAGCTGAGTTGG...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTGTCAGAAGATGTCCTTaGTGGTGTGGCAGGCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSVRRCP*WCGRPN Trigger: GTTGGGCCTGCCACACCAGCAAGGACATCTTCTGAC...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTACCCCTGCCGAACTGTaGTTGGTCATACTTGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSTPAEL*LVILGR Trigger: TCGGCCAAGTATGACCAAGCACAGTTCGGCAGGGGT...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGAGTCTCAGGGCTACCTaGAGGCAGCTCTGTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWSLRAT*RQLCQW Trigger: CCACTGACAGAGCTGCCTCCAGGTAGCCCTGAGACT...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTCCAACTCAGCTTCTCTaGCAGCCAGCACTGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSPTQLL*QPALPT Trigger: TGTGGGCAGTGCTGGCTGGCAGAGAAGCTGAGTTGG...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGGTCAGAAGATGTCCTTaGTGGTGTGGCAGGCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWVRRCP*WCGRPN Trigger: GTTGGGCCTGCCACACCAGCAAGGACATCTTCTGAC...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTACCCCTGCCGAACTGTaGTTGGTCATACTTGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: SRVSLGVGPTVLTECCELTPAEL*LVILGR Trigger: TCGGCCAAGTATGACCAAGCACAGTTCGGCAGGGGT...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGTCTGCTAGCTTGGCGTaGAGCTCTGGATCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWSASLA*SSGSSR Trigger: TCTGCTGGATCCAGAGCTCCACGCCAAGCTAGCAGA...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR TCA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTGGGAGCCATTCTCCATaGATCTTGTCACCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SRVSLGVGPTVLTECCELGSHSP*ILSPEP Trigger: AGGCTCTGGTGACAAGATTCATGGAGAATGGCTCCC...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR TCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGGGGAGCCATTCTCCATaGATCTTGTCACCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWGSHSP*ILSPEP Trigger: AGGCTCTGGTGACAAGATTCATGGAGAATGGCTCCC...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTAGGGATACCAAGGAGTaGCGTGTCTTCCATCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SRVSLGVGPTVLTECCELRDTKE*RVFHLP Trigger: AGGGAGATGGAAGACACGGCACTCCTTGGTATCCCT...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTACCCCTGCCGAACTGTaGTTGGTCATACTTGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSTPAEL*LVILGR Trigger: TCGGCCAAGTATGACCAAGCACAGTTCGGCAGGGGT...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTCAAAATCTGCTAGCTTaGCGTGGAGCTCTGGATCCA | + |
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Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSQNLLA*RGALDP Trigger: TGGATCCAGAGCTCCACGCCAAGCTAGCAGATTTTG...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTTGTGCCTCTTTGGCTTaGCTCTCTGGCAGACAAGTT | + |
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Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSCASLA*LSGRQV Trigger: AACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCACA...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTACATTTTCCAGGAACTaGTCCGGAGGGTTCCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSTFSRN*SGGFLQ Trigger: TTGGAGGAACCCTCCGGACCAGTTCCTGGAAAATGT...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR TCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGGGAGCCATTCTCCATaGATCTTGTCACCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSGSHSP*ILSPEP Trigger: AGGCTCTGGTGACAAGATTCATGGAGAATGGCTCCC...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR TCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTCAGGTGTTGTGCCTCTaGAGGGTAAAGTATGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSQVLCL*RVKYVE Trigger: TTCCACATACTTTACCCTTCAGAGGCACAACACCTG...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTGGCAATCCATTTCTGTaGCTCTTTGGCTTGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SRVSLGVGPTVLTECCELGNPFL*LFGLAL Trigger: GAGAGCCAAGCCAAAGAGGCACAGAAATGGATTGCC...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTGATGTGTCCTGTGCTTaGCTCTCAGGACATTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSDVSCA*LSGHFP Trigger: TGGAAAATGTCCTGAGAGGCAAGCACAGGACACATC...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR GCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTAGGGATACCAAGGAGTaGCGTGTCTTCCATCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSRDTKE*RVFHLP Trigger: AGGGAGATGGAAGACACGGCACTCCTTGGTATCCCT...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGTGTGCCTCTTTGGCTTaGCTCTCTGGCAGACAAGTT | + |
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Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWCASLA*LSGRQV Trigger: AACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCACA...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTATTTCTGTGCCTCTTTaGCTTGGCTCTCTGGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SRVSLGVGPTVLTECCELISVPL*LGSLAD Trigger: GTCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAAT...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGATTTCTGTGCCTCTTTaGCTTGGCTCTCTGGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWISVPL*LGSLAD Trigger: GTCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAAT...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGACATTTTCCAGGAACTaGTCCGGAGGGTTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWTFSRN*SGGFLQ Trigger: TTGGAGGAACCCTCCGGACCAGTTCCTGGAAAATGT...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR CCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTGGCAGTAGTTCTTGGTaGTGCTACCAAGGAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSGSSSW*CYQGVV Trigger: TACAACTCCTTGGTAGCACCACCAAGAACTACTGCC...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR CCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGCTGCCGAACTGTGCTTaGTCATACTTGGCCGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWLPNCA*SYLAEL Trigger: AAGTTCGGCCAAGTATGACCAAGCACAGTTCGGCAG...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR TCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTTGGGAACCCCAGCAATaGATCATTAACTCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSWEPQQ*IINSFS Trigger: ACTGAAGGAGTTAATGATTCATTGCTGGGGTTCCCA...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR TCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGCAGGTGTTGTGCCTCTaGAGGGTAAAGTATGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWQVLCL*RVKYVE Trigger: TTCCACATACTTTACCCTTCAGAGGCACAACACCTG...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR TCA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTCAGGTGTTGTGCCTCTaGAGGGTAAAGTATGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRVSLGVGPTVLTECCELQVLCL*RVKYVE Trigger: TTCCACATACTTTACCCTTCAGAGGCACAACACCTG...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR GCA 90 bp | GTCTTAGCCAGTCCAGGTTGCTTAAAACGTGCTTTTTATTGCCACGCTGAATGGACAAGTTTCTGCCGCTaGTTCTGTGCTGAGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLASPGCLKRAFYCHAEWTSFCR*FCAETD Trigger: ATCTGTCTCAGCACAGAAGCAGCGGCAGAAACTTGT...CCATTCAGCGTGGCAATAAAAAGCACGTTTTAAGCAACCTGGACTGGCTAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR GCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGGCAATCCATTTCTGTaGCTCTTTGGCTTGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSGNPFL*LFGLAL Trigger: GAGAGCCAAGCCAAAGAGGCACAGAAATGGATTGCC...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR CCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTCAAAATCTGCTAGCTTaGCGTGGAGCTCTGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSQNLLA*RGALDP Trigger: TGGATCCAGAGCTCCACGCCAAGCTAGCAGATTTTG...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR CCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTATTTCTGTGCCTCTTTaGCTTGGCTCTCTGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSISVPL*LGSLAD Trigger: GTCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAAT...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR CCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTACATTTTCCAGGAACTaGTCCGGAGGGTTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSTFSRN*SGGFLQ Trigger: TTGGAGGAACCCTCCGGACCAGTTCCTGGAAAATGT...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR CCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTCTGCCGAACTGTGCTTaGTCATACTTGGCCGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSLPNCA*SYLAEL Trigger: AAGTTCGGCCAAGTATGACCAAGCACAGTTCGGCAG...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR TCA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTTGGGAACCCCAGCAATaGATCATTAACTCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRVSLGVGPTVLTECCELWEPQQ*IINSFS Trigger: ACTGAAGGAGTTAATGATTCATTGCTGGGGTTCCCA...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR GCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTACAAGTTTCTGCCGCTaGTTCTGTGCTGAGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSTSFCR*FCAETD Trigger: ATCTGTCTCAGCACAGAAGCAGCGGCAGAAACTTGT...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR GCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATGTGTCCTGTGCTTaGCTCTCAGGACATTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSDVSCA*LSGHFP Trigger: TGGAAAATGTCCTGAGAGGCAAGCACAGGACACATC...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR CCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGGCAGTAGTTCTTGGTaGTGCTACCAAGGAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSGSSSW*CYQGVV Trigger: TACAACTCCTTGGTAGCACCACCAAGAACTACTGCC...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR TCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTTGGGAACCCCAGCAATaGATCATTAACTCCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSWEPQQ*IINSFS Trigger: ACTGAAGGAGTTAATGATTCATTGCTGGGGTTCCCA...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTTTGACTGCTACATCATaGTTCCATGTTCTGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSLTATS*FHVLWC Trigger: ACACCACAGAACATGGAACCATGATGTAGCAGTCAA...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022830.14 |
||
| CDS-3UTR CCA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTGATTGTAAACTTCATTaGTTTTTGGTTCGCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSDCKLH*FLVRSP Trigger: AGGACTGCGAACCAAAAACCAATGAAGTTTACAATC...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR CCA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTGTAAACTTCATTaGTTTTTGGTTCGCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSDCKLH*FLVRSP Trigger: AGGACTGCGAACCAAAAACCAATGAAGTTTACAATC...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS CCA 90 bp | GTAGCACATCCCCAGCACCACTTCCTGCAGCAGGCGACAGAGGAGTaGCCAGGGCCGAGGGCACTCGGGTTGCAGCAGCCCTGCGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VAHPQHHFLQQATEE*PGPRALGLQQPCEG Trigger: TCCCTCGCAGGGCTGCTGCAACCCGAGTGCCCTCGGCCCTGGCCACTCCTCTGTCGCCTGCTGCAGGAAGTGGTGCTGGGGATGTGCTAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS GCA 90 bp | ACAGAGGAGTGGCCAGGGCCGAGGGCACTCGGGTTGCAGCAGCCCTaGGAGGGAGCCATTCTCCATGAATCTTGTCACCAGAGCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TEEWPGPRALGLQQP*EGAILHESCHQSLP Trigger: GGGCAGGCTCTGGTGACAAGATTCATGGAGAATGGCTCCCTCGCAGGGCTGCTGCAACCCGAGTGCCCTCGGCCCTGGCCACTCCTCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS GCA 90 bp | TGCAGCAGGCGACAGAGGAGTGGCCAGGGCCGAGGGCACTCGGGTTaGAGCAGCCCTGCGAGGGAGCCATTCTCCATGAATCTTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: CSRRQRSGQGRGHSG*SSPAREPFSMNLVT Trigger: GGTGACAAGATTCATGGAGAATGGCTCCCTCGCAGGGCTGCTGCAACCCGAGTGCCCTCGGCCCTGGCCACTCCTCTGTCGCCTGCTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS TCA 90 bp | GAGGGCACTCGGGTTGCAGCAGCCCTGCGAGGGAGCCATTCTCCATaGATCTTGTCACCAGAGCCTGCCCGGACACGAAGTCCCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EGTRVAAALRGSHSP*ILSPEPARTRSPTG Trigger: TCCAGTGGGACTTCGTGTCCGGGCAGGCTCTGGTGACAAGATTCATGGAGAATGGCTCCCTCGCAGGGCTGCTGCAACCCGAGTGCCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS GCA 90 bp | AGCCCTGCGAGGGAGCCATTCTCCATGAATCTTGTCACCAGAGCCTaGCCGGACACGAAGTCCCACTGGAGGTCCTCAGTGACCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPAREPFSMNLVTRA*PDTKSHWRSSVTPS Trigger: GCTGGGGGTCACTGAGGACCTCCAGTGGGACTTCGTGTCCGGGCAGGCTCTGGTGACAAGATTCATGGAGAATGGCTCCCTCGCAGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS CCA 90 bp | TCTGAGGAGTGCCAGCCACGGGGTCAGAAGATGTCCTTGCTGGTGTaGCAGGCCCAACTGATGTGTCCTGTGCTTGCCTCTCAGGACATT | + |
|
Preference number: 5 (lower is better) Translates to: SEECQPRGQKMSLLV*QAQLMCPVLASQDI Trigger: AATGTCCTGAGAGGCAAGCACAGGACACATCAGTTGGGCCTGCCACACCAGCAAGGACATCTTCTGACCCCGTGGCTGGCACTCCTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228476.2 |
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| CDS TCA 90 bp | AGCCACGGGGTCAGAAGATGTCCTTGCTGGTGTGGCAGGCCCAACTaGTGTGTCCTGTGCTTGCCTCTCAGGACATTTTCCAGGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHGVRRCPCWCGRPN*CVLCLPLRTFSRNW Trigger: CCAGTTCCTGGAAAATGTCCTGAGAGGCAAGCACAGGACACATCAGTTGGGCCTGCCACACCAGCAAGGACATCTTCTGACCCCGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228476.2 |
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| CDS CCA 90 bp | TCCATGAATCTTGTCACCAGAGCCTGCCCGGACACGAAGTCCCACTaGAGGTCCTCAGTGACCCCCAGCAGGAGCAGAACGTTCTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: SMNLVTRACPDTKSH*RSSVTPSRSRTFSL Trigger: TAATGAGAACGTTCTGCTCCTGCTGGGGGTCACTGAGGACCTCCAGTGGGACTTCGTGTCCGGGCAGGCTCTGGTGACAAGATTCATGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS CCA 90 bp | TACTTGTGGAAGGGCTGCCAGCCCCTACCCCTGCCGAACTGTGCTTaGTCATACTTGGCCGAACTTGAGGCAGTAGTTCTTGGTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: YLWKGCQPLPLPNCA*SYLAELEAVVLGGA Trigger: AGCACCACCAAGAACTACTGCCTCAAGTTCGGCCAAGTATGACCAAGCACAGTTCGGCAGGGGTAGGGGCTGGCAGCCCTTCCACAAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS CCA 90 bp | AACCATGGTTTCCCTCGGGCAATCCATTTCTGTGCCTCTTTGGCTTaGCTCTCTGGCAGACAAGTTTCTGCCGCTGCTTCTGTGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NHGFPRAIHFCASLA*LSGRQVSAAASVLR Trigger: TCTCAGCACAGAAGCAGCGGCAGAAACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAATGGATTGCCCGAGGGAAACCATGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228476.2 |
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| CDS GCA 90 bp | GTTCACGATCTTGACTGCTACATCATGGTTCCATGTTCTGTGGTGTaGCCGGAACACGACTCCGAACCCTCCTTTACCCACAAACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VHDLDCYIMVPCSVV*PEHDSEPSFTHKLQ Trigger: CTGGAGTTTGTGGGTAAAGGAGGGTTCGGAGTCGTGTTCCGGGCACACCACAGAACATGGAACCATGATGTAGCAGTCAAGATCGTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022830.14 |
||
| CDS CCA 90 bp | TTAGAAACCATGGTTTCCCTCGGGCAATCCATTTCTGTGCCTCTTTaGCTTGGCTCTCTGGCAGACAAGTTTCTGCCGCTGCTTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LETMVSLGQSISVPL*LGSLADKFLPLLLC Trigger: GCACAGAAGCAGCGGCAGAAACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAATGGATTGCCCGAGGGAAACCATGGTTTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228476.2 |
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| CDS GCA 90 bp | AGCCTTCACCTCCCAGGATATCTTCTTCGAGTTCACGATCTTGACTaGTACATCATGGTTCCATGTTCTGTGGTGTGCCCGGAACACGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLHLPGYLLRVHDLD*YIMVPCSVVCPEHD Trigger: GTCGTGTTCCGGGCACACCACAGAACATGGAACCATGATGTAGCAGTCAAGATCGTGAACTCGAAGAAGATATCCTGGGAGGTGAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022830.14 |
||
| CDS GCA 90 bp | CCATTTCTGTGCCTCTTTGGCTTGGCTCTCTGGCAGACAAGTTTCTaGCGCTGCTTCTGTGCTGAGACAGATAATGCTTTACCTCGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PFLCLFGLALWQTSF*RCFCAETDNALPRR Trigger: TCTCCGAGGTAAAGCATTATCTGTCTCAGCACAGAAGCAGCGGCAGAAACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS CCA 90 bp | TTCGAGTTCACGATCTTGACTGCTACATCATGGTTCCATGTTCTGTaGTGTGCCCGGAACACGACTCCGAACCCTCCTTTACCCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FEFTILTATSWFHVL*CARNTTPNPPLPTN Trigger: GTTTGTGGGTAAAGGAGGGTTCGGAGTCGTGTTCCGGGCACACCACAGAACATGGAACCATGATGTAGCAGTCAAGATCGTGAACTCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022830.14 |
||
| CDS CCA 90 bp | TCCCAGGATATCTTCTTCGAGTTCACGATCTTGACTGCTACATCATaGTTCCATGTTCTGTGGTGTGCCCGGAACACGACTCCGAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SQDIFFEFTILTATS*FHVLWCARNTTPNP Trigger: AGGGTTCGGAGTCGTGTTCCGGGCACACCACAGAACATGGAACCATGATGTAGCAGTCAAGATCGTGAACTCGAAGAAGATATCCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022830.14 |
||
| CDS CCA 90 bp | TTTCCCTCGGGCAATCCATTTCTGTGCCTCTTTGGCTTGGCTCTCTaGCAGACAAGTTTCTGCCGCTGCTTCTGTGCTGAGACAGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: FPSGNPFLCLFGLAL*QTSFCRCFCAETDN Trigger: ATTATCTGTCTCAGCACAGAAGCAGCGGCAGAAACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAATGGATTGCCCGAGGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228476.2 |
||
| CDS-3UTR CAA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTCTGTGCCTCTTTGGCTaGGCTCTCTGGCAGACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSLCLFG*ALWQTS Trigger: ACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCACAG...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR CAA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTCATTTCTGTGCCTCTTaGGCTTGGCTCTCTGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSHFCAS*AWLSGR Trigger: TCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAATG...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR CAA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTCTGTGCCTCTTTGGCTaGGCTCTCTGGCAGACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSLCLFG*ALWQTS Trigger: ACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCACAG...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS-3UTR CAA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTCATTTCTGTGCCTCTTaGGCTTGGCTCTCTGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSHFCAS*AWLSGR Trigger: TCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAATG...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS CCA 90 bp | AGCATCTACCTTGTCCTTTACCAGATTGTAAACTTCATTGGTTTTTaGTTCGCAGTCCTGGAAGGATGGCCTGTTTTCGGACTGGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: SIYLVLYQIVNFIGF*FAVLEGWPVFGLGT Trigger: GGTTCCCAGTCCGAAAACAGGCCATCCTTCCAGGACTGCGAACCAAAAACCAATGAAGTTTACAATCTGGTAAAGGACAAGGTAGATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
||
| CDS CCA 90 bp | AGACAGCAGCATCTACCTTGTCCTTTACCAGATTGTAAACTTCATTaGTTTTTGGTTCGCAGTCCTGGAAGGATGGCCTGTTTTCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: RQQHLPCPLPDCKLH*FLVRSPGRMACFRT Trigger: AGTCCGAAAACAGGCCATCCTTCCAGGACTGCGAACCAAAAACCAATGAAGTTTACAATCTGGTAAAGGACAAGGTAGATGCTGCTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CAA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTAAACTTCATTGGTTTTaGGTTCGCAGTCCTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: SRVSLGVGPTVLTECCELKLHWF*VRSPGR Trigger: CCTTCCAGGACTGCGAACCAAAAACCAATGAAGTTT...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CAA 90 bp | CGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTGATTCTTTAGAAGCCTTCAGGTaGACATCAAATAACAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: RAFYCHAEWHTSGSCSDSLEAFR*TSNNSS Trigger: AGAGCTGTTATTTGATGTCAACCTGAAGGCTTCTAA...AGAATCACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CAA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTAAACTTCATTGGTTTTaGGTTCGCAGTCCTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSKLHWF*VRSPGR Trigger: CCTTCCAGGACTGCGAACCAAAAACCAATGAAGTTT...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CAA 90 bp | TCAAGAGTCAGTTTGGGTGTAGGTCCAACTGTCCTCACAGAATGTTGTGAGCTTTTAGAAGCCTTCAGGTaGACATCAAATAACAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SRVSLGVGPTVLTECCELLEAFR*TSNNSS Trigger: AGAGCTGTTATTTGATGTCAACCTGAAGGCTTCTAA...AAGCTCACAACATTCTGTGAGGACAGTTGGACCTACACCCAAACTGACTCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS-3UTR CAA 90 bp | TTAAAACGTGCTTTTTATTGCCACGCTGAATGGCACACTTCAGGCTCTTGCAGTTTAGAAGCCTTCAGGTaGACATCAAATAACAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: LKRAFYCHAEWHTSGSCSLEAFR*TSNNSS Trigger: AGAGCTGTTATTTGATGTCAACCTGAAGGCTTCTAA...ACTGCAAGAGCCTGAAGTGTGCCATTCAGCGTGGCAATAAAAAGCACGTTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS GCA 72 bp | CGACAGAGGAGTGGCCAGGGCCGAGGGCACTCGGGTTaGAGCAGCCCTGCGAGGGAGCCATTCTCCATGAAT | + |
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Preference number: 6 (lower is better) Translates to: RQRSGQGRGHSG*SSPAREPFSMN Trigger: ATTCATGGAGAATGGCTCCCTCGCAGGGCTGCTGCAACCCGAGTGCCCTCGGCCCTGGCCACTCCTCTGTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS CAA 90 bp | CTGCAGCAGGCGACAGAGGAGTGGCCAGGGCCGAGGGCACTCGGGTaGCAGCAGCCCTGCGAGGGAGCCATTCTCCATGAATCTTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: LQQATEEWPGPRALG*QQPCEGAILHESCH Trigger: GTGACAAGATTCATGGAGAATGGCTCCCTCGCAGGGCTGCTGCAACCCGAGTGCCCTCGGCCCTGGCCACTCCTCTGTCGCCTGCTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS CCA 72 bp | CTTGTCACCAGAGCCTGCCCGGACACGAAGTCCCACTaGAGGTCCTCAGTGACCCCCAGCAGGAGCAGAACG | + |
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Preference number: 6 (lower is better) Translates to: LVTRACPDTKSH*RSSVTPSRSRT Trigger: CGTTCTGCTCCTGCTGGGGGTCACTGAGGACCTCCAGTGGGACTTCGTGTCCGGGCAGGCTCTGGTGACAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS CCA 72 bp | GGGAGTCTCAGGGCTACCTGGAGGCAGCTCTGTCAGTaGAGGACGACTCTGCCTGTCACACACTGTTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: GSLRATWRQLCQ*RTTLPVTHCFP Trigger: CGGGAAACAGTGTGTGACAGGCAGAGTCGTCCTCCACTGACAGAGCTGCCTCCAGGTAGCCCTGAGACTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS TCA 72 bp | CCTGCCCGGACACGAAGTCCCACTGGAGGTCCTCAGTaGCCCCCAGCAGGAGCAGAACGTTCTCATTACGAA | + |
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Preference number: 6 (lower is better) Translates to: PARTRSPTGGPQ*PPAGAERSHYE Trigger: TTCGTAATGAGAACGTTCTGCTCCTGCTGGGGGTCACTGAGGACCTCCAGTGGGACTTCGTGTCCGGGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS CCA 72 bp | TGCCAGCCACGGGGTCAGAAGATGTCCTTGCTGGTGTaGCAGGCCCAACTGATGTGTCCTGTGCTTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: CQPRGQKMSLLV*QAQLMCPVLAS Trigger: AGAGGCAAGCACAGGACACATCAGTTGGGCCTGCCACACCAGCAAGGACATCTTCTGACCCCGTGGCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228476.2 |
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| CDS TCA 72 bp | CCTGATCCTGATCCTGACCCTGACTGGGACCCTCCCTaGAACGTGGACAGGCCAAAATCTGCTAGCTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: PDPDPDPDWDPP*NVDRPKSASLA Trigger: CGCCAAGCTAGCAGATTTTGGCCTGTCCACGTTTCAGGGAGGGTCCCAGTCAGGGTCAGGATCAGGATCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS GCA 72 bp | AGGGAGCCATTCTCCATGAATCTTGTCACCAGAGCCTaGCCGGACACGAAGTCCCACTGGAGGTCCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: REPFSMNLVTRA*PDTKSHWRSSV Trigger: CACTGAGGACCTCCAGTGGGACTTCGTGTCCGGGCAGGCTCTGGTGACAAGATTCATGGAGAATGGCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS CCA 72 bp | CTGATCCTGACCCTGACTGGGACCCTCCCTGAAACGTaGACAGGCCAAAATCTGCTAGCTTGGCGTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LILTLTGTLPET*TGQNLLAWRGA Trigger: AGCTCCACGCCAAGCTAGCAGATTTTGGCCTGTCCACGTTTCAGGGAGGGTCCCAGTCAGGGTCAGGATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228326.2 |
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| CDS CCA 72 bp | CTTCAGTTTTTCCAAGCCGGGAGTCTCAGGGCTACCTaGAGGCAGCTCTGTCAGTGGAGGACGACTCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LQFFQAGSLRAT*RQLCQWRTTLP Trigger: AGGCAGAGTCGTCCTCCACTGACAGAGCTGCCTCCAGGTAGCCCTGAGACTCCCGGCTTGGAAAAACTGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS CCA 72 bp | GTCCTGTGCTTGCCTCTCAGGACATTTTCCAGGAACTaGTCCGGAGGGTTCCTCCAAATGCAGGCGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VLCLPLRTFSRN*SGGFLQMQAVQ Trigger: CTGGACCGCCTGCATTTGGAGGAACCCTCCGGACCAGTTCCTGGAAAATGTCCTGAGAGGCAAGCACAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228476.2 |
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| CDS CCA 72 bp | AAGGGCTGCCAGCCCCTACCCCTGCCGAACTGTGCTTaGTCATACTTGGCCGAACTTGAGGCAGTAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KGCQPLPLPNCA*SYLAELEAVVL Trigger: AAGAACTACTGCCTCAAGTTCGGCCAAGTATGACCAAGCACAGTTCGGCAGGGGTAGGGGCTGGCAGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS CAA 90 bp | GGACGACTCTGCCTGTCACACACTGTTTCCCGGATTAGTGAAGTCTaGTCTACCAACTCAGCTTCTCTGCCAGCCAGCACTGCCCACACG | + |
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Preference number: 6 (lower is better) Translates to: GRLCLSHTVSRISEV*STNSASLPASTAHT Trigger: CGTGTGGGCAGTGCTGGCTGGCAGAGAAGCTGAGTTGGTAGACAAGACTTCACTAATCCGGGAAACAGTGTGTGACAGGCAGAGTCGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS CAA 90 bp | GCTGAGCGGGGAGAGCAAGAGAGAATGAAGAATGGGTACCTGTCATaGGATTCGGTGGGGTCCAGGGATACCAAGGAGTGCCGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AERGEQERMKNGYLS*DSVGSRDTKECRVF Trigger: GAAGACACGGCACTCCTTGGTATCCCTGGACCCCACCGAATCCAATGACAGGTACCCATTCTTCATTCTCTCTTGCTCTCCCCGCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228476.2 |
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| CDS GCA 72 bp | CTTGTCTACCAACTCAGCTTCTCTGCCAGCCAGCACTaGCCACACGAGGATCCCAAAGCTGTAGACATCACT | + |
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Preference number: 6 (lower is better) Translates to: LVYQLSFSASQH*PHEDPKAVDIT Trigger: AGTGATGTCTACAGCTTTGGGATCCTCGTGTGGGCAGTGCTGGCTGGCAGAGAAGCTGAGTTGGTAGACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS GCA 72 bp | GGATTAGTGAAGTCTTGTCTACCAACTCAGCTTCTCTaGCAGCCAGCACTGCCCACACGAGGATCCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: GLVKSCLPTQLL*QPALPTRGSQS Trigger: GCTTTGGGATCCTCGTGTGGGCAGTGCTGGCTGGCAGAGAAGCTGAGTTGGTAGACAAGACTTCACTAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS CCA 72 bp | GGCAATCCATTTCTGTGCCTCTTTGGCTTGGCTCTCTaGCAGACAAGTTTCTGCCGCTGCTTCTGTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: GNPFLCLFGLAL*QTSFCRCFCAE Trigger: CTCAGCACAGAAGCAGCGGCAGAAACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAATGGATTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228476.2 |
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| CDS CCA 72 bp | TTCCCTCGGGCAATCCATTTCTGTGCCTCTTTGGCTTaGCTCTCTGGCAGACAAGTTTCTGCCGCTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FPRAIHFCASLA*LSGRQVSAAAS Trigger: AGAAGCAGCGGCAGAAACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAATGGATTGCCCGAGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228476.2 |
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| CDS CAA 72 bp | TTTCCCTCGGGCAATCCATTTCTGTGCCTCTTTGGCTaGGCTCTCTGGCAGACAAGTTTCTGCCGCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FPSGNPFLCLFG*ALWQTSFCRCF Trigger: GAAGCAGCGGCAGAAACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAATGGATTGCCCGAGGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228476.2 |
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| CDS CAA 90 bp | AAACCATGGTTTCCCTCGGGCAATCCATTTCTGTGCCTCTTTGGCTaGGCTCTCTGGCAGACAAGTTTCTGCCGCTGCTTCTGTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: KPWFPSGNPFLCLFG*ALWQTSFCRCFCAE Trigger: CTCAGCACAGAAGCAGCGGCAGAAACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCACAGAAATGGATTGCCCGAGGGAAACCATGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 ENSMUST00000228476.2 |
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| CDS TCA 72 bp | CCTGCCGAACTGTGCTTGGTCATACTTGGCCGAACTTaGGGCAGTAGTTCTTGGTGGTGCTACCAAGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: PAELCLVILGRT*GSSSWWCYQGV Trigger: AACTCCTTGGTAGCACCACCAAGAACTACTGCCTCAAGTTCGGCCAAGTATGACCAAGCACAGTTCGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS CAA 72 bp | GGAGAGCAAGAGAGAATGAAGAATGGGTACCTGTCATaGGATTCGGTGGGGTCCAGGGATACCAAGGAGTGC | + |
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Preference number: 6 (lower is better) Translates to: GEQERMKNGYLS*DSVGSRDTKEC Trigger: GCACTCCTTGGTATCCCTGGACCCCACCGAATCCAATGACAGGTACCCATTCTTCATTCTCTCTTGCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228476.2 |
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| CDS GCA 72 bp | TTTGGCTTGGCTCTCTGGCAGACAAGTTTCTGCCGCTaGTTCTGTGCTGAGACAGATAATGCTTTACCTCGG | + |
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Preference number: 6 (lower is better) Translates to: FGLALWQTSFCR*FCAETDNALPR Trigger: CCGAGGTAAAGCATTATCTGTCTCAGCACAGAAGCAGCGGCAGAAACTTGTCTGCCAGAGAGCCAAGCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS CCA 72 bp | ACGATCTTGACTGCTACATCATGGTTCCATGTTCTGTaGTGTGCCCGGAACACGACTCCGAACCCTCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: TILTATSWFHVL*CARNTTPNPPL Trigger: TAAAGGAGGGTTCGGAGTCGTGTTCCGGGCACACCACAGAACATGGAACCATGATGTAGCAGTCAAGATCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022830.14 |
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| CDS TCA 72 bp | AGTTGTAGTTCCCAATCTGCACTTCAGAACAGTTGTTaGAGACGAGAGCCGGTGGCCCTGTCATTGGATTCG | + |
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Preference number: 6 (lower is better) Translates to: SCSSQSALQNSC*RREPVALSLDS Trigger: CGAATCCAATGACAGGGCCACCGGCTCTCGTCTTCAACAACTGTTCTGAAGTGCAGATTGGGAACTACAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS GCA 72 bp | TGCCTCTTTGGCTTGGCTCTCTGGCAGACAAGTTTCTaGCGCTGCTTCTGTGCTGAGACAGATAATGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: CLFGLALWQTSF*RCFCAETDNAL Trigger: TAAAGCATTATCTGTCTCAGCACAGAAGCAGCGGCAGAAACTTGTCTGCCAGAGAGCCAAGCCAAAGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS CCA 72 bp | ATCTTCTTCGAGTTCACGATCTTGACTGCTACATCATaGTTCCATGTTCTGTGGTGTGCCCGGAACACGACT | + |
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Preference number: 6 (lower is better) Translates to: IFFEFTILTATS*FHVLWCARNTT Trigger: AGTCGTGTTCCGGGCACACCACAGAACATGGAACCATGATGTAGCAGTCAAGATCGTGAACTCGAAGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022830.14 |
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| CDS CAA 90 bp | CAGCATCTACCTTGTCCTTTACCAGATTGTAAACTTCATTGGTTTTaGGTTCGCAGTCCTGGAAGGATGGCCTGTTTTCGGACTGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: QHLPCPLPDCKLHWF*VRSPGRMACFRTGN Trigger: GTTCCCAGTCCGAAAACAGGCCATCCTTCCAGGACTGCGAACCAAAAACCAATGAAGTTTACAATCTGGTAAAGGACAAGGTAGATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS CAA 72 bp | TTCACCTCCCAGGATATCTTCTTCGAGTTCACGATCTaGACTGCTACATCATGGTTCCATGTTCTGTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: FTSQDIFFEFTI*TATSWFHVLWC Trigger: ACACCACAGAACATGGAACCATGATGTAGCAGTCAAGATCGTGAACTCGAAGAAGATATCCTGGGAGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022830.14 |
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| CDS CCA 72 bp | CTTGTCCTTTACCAGATTGTAAACTTCATTGGTTTTTaGTTCGCAGTCCTGGAAGGATGGCCTGTTTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: LVLYQIVNFIGF*FAVLEGWPVFG Trigger: TCCGAAAACAGGCCATCCTTCCAGGACTGCGAACCAAAAACCAATGAAGTTTACAATCTGGTAAAGGACAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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| CDS CCA 72 bp | CATCTACCTTGTCCTTTACCAGATTGTAAACTTCATTaGTTTTTGGTTCGCAGTCCTGGAAGGATGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: HLPCPLPDCKLH*FLVRSPGRMAC Trigger: ACAGGCCATCCTTCCAGGACTGCGAACCAAAAACCAATGAAGTTTACAATCTGGTAAAGGACAAGGTAGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022830.14 ENSMUST00000168716.8 ENSMUST00000178399.3 |
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