Pregenerated sensors for RIPK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041135Ensembl transcript IDs: ENSMUST00000037035.12, ENSMUST00000183871.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAGGAACACGAGGAGGCCCTGCGATCACAGAAGGCTGCCCCTGGTaGTACAGAAACGATACCATCCCAGCTGTGGTTTCCAGGACAGTG | + |
|
Preference number: 1 (lower is better) Translates to: QGTRGGPAITEGCPW*YRNDTIPAVVSRTV Trigger: CACTGTCCTGGAAACCACAGCTGGGATGGTATCGTTTCTGTACCACCAGGGGCAGCCTTCTGTGATCGCAGGGCCTCCTCGTGTTCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CCA 90 bp | AGCCAAGGAACACGAGGAGGCCCTGCGATCACAGAAGGCTGCCCCTaGTGGTACAGAAACGATACCATCCCAGCTGTGGTTTCCAGGACA | + |
|
Preference number: 1 (lower is better) Translates to: SQGTRGGPAITEGCP*WYRNDTIPAVVSRT Trigger: TGTCCTGGAAACCACAGCTGGGATGGTATCGTTTCTGTACCACCAGGGGCAGCCTTCTGTGATCGCAGGGCCTCCTCGTGTTCCTTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR GCA 90 bp | TTCTACCCAACCCGCATATGCTTAAAACAGGAGCCGGAAGCAGGCTaGAGCAGGATGCACAATGGGCTGCTCGCTCTGGAGACAGACAGG | + |
|
Preference number: 1 (lower is better) Translates to: FYPTRICLKQEPEAG*SRMHNGLLALETDR Trigger: CCTGTCTGTCTCCAGAGCGAGCAGCCCATTGTGCATCCTGCTGCAGCCTGCTTCCGGCTCCTGTTTTAAGCATATGCGGGTTGGGTAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR CCA 90 bp | GACAGAAGGGCGTCCAGCGATTGGTTAAGGCAGGCTTCAGTCATCTaGCTCACAATGGCTTCCCTCTTACTCTGGATCCACTGTTGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: DRRASSDWLRQASVI*LTMASLLLWIHCWA Trigger: AGCCCAACAGTGGATCCAGAGTAAGAGGGAAGCCATTGTGAGCCAGATGACTGAAGCCTGCCTTAACCAATCGCTGGACGCCCTTCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CCA 90 bp | TCCTCCTTCATGATCAGGTCACGAGACAGAAGGGCGTCCAGCGATTaGTTAAGGCAGGCTTCAGTCATCTGGCTCACAATGGCTTCCCTC | + |
|
Preference number: 1 (lower is better) Translates to: SSFMIRSRDRRASSD*LRQASVIWLTMASL Trigger: GAGGGAAGCCATTGTGAGCCAGATGACTGAAGCCTGCCTTAACCAATCGCTGGACGCCCTTCTGTCTCGTGACCTGATCATGAAGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CCA 90 bp | AGGCAGGCTTCAGTCATCTGGCTCACAATGGCTTCCCTCTTACTCTaGATCCACTGTTGGGCTATACCAATTGGTGGGCGCTCTGAACCT | + |
|
Preference number: 1 (lower is better) Translates to: RQASVIWLTMASLLL*IHCWAIPIGGRSEP Trigger: AGGTTCAGAGCGCCCACCAATTGGTATAGCCCAACAGTGGATCCAGAGTAAGAGGGAAGCCATTGTGAGCCAGATGACTGAAGCCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CCA 90 bp | GTCATCTGGCTCACAATGGCTTCCCTCTTACTCTGGATCCACTGTTaGGCTATACCAATTGGTGGGCGCTCTGAACCTTTCTCAACCAAG | + |
|
Preference number: 1 (lower is better) Translates to: VIWLTMASLLLWIHC*AIPIGGRSEPFSTK Trigger: CTTGGTTGAGAAAGGTTCAGAGCGCCCACCAATTGGTATAGCCCAACAGTGGATCCAGAGTAAGAGGGAAGCCATTGTGAGCCAGATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR TCA 90 bp | CTCCCAAAGAAGGCCCCCTTACAAGCTTTTATTCTGAGGGAAATTTaGAGGCGGTGCTTTGGAAAGCACAGGTACTTCTGGGTAAGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: LPKKAPLQAFILREI*RRCFGKHRYFWVRL Trigger: CAGCCTTACCCAGAAGTACCTGTGCTTTCCAAAGCACCGCCTTCAAATTTCCCTCAGAATAAAAGCTTGTAAGGGGGCCTTCTTTGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR TCA 90 bp | CTTACTCTGGATCCACTGTTGGGCTATACCAATTGGTGGGCGCTCTaGACCTTTCTCAACCAAGAATGGACTTATTACAGCCAAGGAACA | + |
|
Preference number: 1 (lower is better) Translates to: LTLDPLLGYTNWWAL*TFLNQEWTYYSQGT Trigger: TGTTCCTTGGCTGTAATAAGTCCATTCTTGGTTGAGAAAGGTTCAGAGCGCCCACCAATTGGTATAGCCCAACAGTGGATCCAGAGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR TCA 90 bp | TTTCTAGAGAGCAGAGAGGATCCACACGATTCCTCCTGTGGGGGATaGTTTGCAGGTATGTTTAGCGATAAATCCATTTTCTTATCACAT | + |
|
Preference number: 1 (lower is better) Translates to: FLESREDPHDSSCGG*FAGMFSDKSIFLSH Trigger: ATGTGATAAGAAAATGGATTTATCGCTAAACATACCTGCAAATCATCCCCCACAGGAGGAATCGTGTGGATCCTCTCTGCTCTCTAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CCA 90 bp | TTATCTTTCAACTTCTGCACTACAACTTTGGCAAACTCTTCTCCTTaGATGTCAGACGTATCTAGCAGCTGTCTGACTTTTGAGGTCCTT | + |
|
Preference number: 1 (lower is better) Translates to: LSFNFCTTTLANSSP*MSDVSSSCLTFEVL Trigger: AAGGACCTCAAAAGTCAGACAGCTGCTAGATACGTCTGACATCCAAGGAGAAGAGTTTGCCAAAGTTGTAGTGCAGAAGTTGAAAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR TCA 90 bp | AGAATTTGTAAGTCAAACTTAAAACCGAGTAACTCTTTGGAGATCTaGACTTGGGATTGGCAAATGGGGAGCCTGAATCACTGCTATGTA | + |
|
Preference number: 1 (lower is better) Translates to: RICKSNLKPSNSLEI*TWDWQMGSLNHCYV Trigger: TACATAGCAGTGATTCAGGCTCCCCATTTGCCAATCCCAAGTTCAGATCTCCAAAGAGTTACTCGGTTTTAAGTTTGACTTACAAATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR TCA 90 bp | TTTGCAGGTATGTTTAGCGATAAATCCATTTTCTTATCACATAAGTaGATAGTACTTGAGGAACTCTGTATCCATGCTGGCCTTGAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: FAGMFSDKSIFLSHK*IVLEELCIHAGLEL Trigger: GAGCTCAAGGCCAGCATGGATACAGAGTTCCTCAAGTACTATTCACTTATGTGATAAGAAAATGGATTTATCGCTAAACATACCTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTTTCCAGGACAGTGGTGTGCCTTCAACGAAGAGCAGTCTTGAGGTGCTCCTATCCATGCTGGCCTTaGGCTCACACTGTAGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: VVSRTVVCLQRRAVLRCSYPCWP*AHTVAQ Trigger: CTGGGCTACAGTGTGAGCTCAAGGCCAGCATGGATA...GGAGCACCTCAAGACTGCTCTTCGTTGAAGGCACACCACTGTCCTGGAAACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CAA 90 bp | GTCCTCCTTCATGATCAGGTCACGAGACAGAAGGGCGTCCAGCGATaGGTTAAGGCAGGCTTCAGTCATCTGGCTCACAATGGCTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: VLLHDQVTRQKGVQR*VKAGFSHLAHNGFP Trigger: AGGGAAGCCATTGTGAGCCAGATGACTGAAGCCTGCCTTAACCAATCGCTGGACGCCCTTCTGTCTCGTGACCTGATCATGAAGGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTCGCTCTGGAGACAGACAGGAGGCAAAAGTTAAGCAGAGGTCCACGGCTGGGGAGCCTGAATCACTaGTATGTAAAGTCAAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: LLALETDRRQKLSRGPRLGSLNH*YVKSNC Trigger: GCAGTTTGACTTTACATAGCAGTGATTCAGGCTCCC...CAGCCGTGGACCTCTGCTTAACTTTTGCCTCCTGTCTGTCTCCAGAGCGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCCGACATGAGCCGGAAGCAGGCTaGAGCAGGATGCACAATGGG | + |
|
Preference number: 2 (lower is better) Translates to: QVDKSNLGKSNTERRGRHEPEAG*SRMHNG Trigger: CCCATTGTGCATCCTGCTGCAGCCTGCTTCCGGCTC...ATGTCGGCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCATCTGGCTCACAATGGCTTCCCTCTTACTCTGGATCCACTGTTGGGCTATAGAAGGCTGCCCCTGGTaGTACAGAAACGATACCATC | + |
|
Preference number: 2 (lower is better) Translates to: VIWLTMASLLLWIHCWAIEGCPW*YRNDTI Trigger: GATGGTATCGTTTCTGTACCACCAGGGGCAGCCTTC...TATAGCCCAACAGTGGATCCAGAGTAAGAGGGAAGCCATTGTGAGCCAGATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAGAGACTCTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTGAGCCGGAAGCAGGCTaGAGCAGGATGCACAATGGG | + |
|
Preference number: 2 (lower is better) Translates to: GKRLFHQPSVKRLILSCFEPEAG*SRMHNG Trigger: CCCATTGTGCATCCTGCTGCAGCCTGCTTCCGGCTC...AAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAGAGTCTCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR CAA 90 bp | CCTCCCAAAGAAGGCCCCCTTACAAGCTTTTATTCTGAGGGAAATTaGAAGGCGGTGCTTTGGAAAGCACAGGTACTTCTGGGTAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: PPKEGPLTSFYSEGN*KAVLWKAQVLLGKA Trigger: AGCCTTACCCAGAAGTACCTGTGCTTTCCAAAGCACCGCCTTCAAATTTCCCTCAGAATAAAAGCTTGTAAGGGGGCCTTCTTTGGGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR-3UTR CCA 90 bp | GACGTATCTAGCAGCTGTCTGACTTTTGAGGTCCTTGTAGGTTTGGTGCTAATGTGGTTTCCAGGACAGTaGTGTGCCTTCAACGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: DVSSSCLTFEVLVGLVLMWFPGQ*CAFNEE Trigger: CTCTTCGTTGAAGGCACACCACTGTCCTGGAAACCA...CATTAGCACCAAACCTACAAGGACCTCAAAAGTCAGACAGCTGCTAGATACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CAA 90 bp | CAATGGCTTCCCTCTTACTCTGGATCCACTGTTGGGCTATACCAATaGGTGGGCGCTCTGAACCTTTCTCAACCAAGAATGGACTTATTA | + |
|
Preference number: 2 (lower is better) Translates to: QWLPSYSGSTVGLYQ*VGALNLSQPRMDLL Trigger: TAATAAGTCCATTCTTGGTTGAGAAAGGTTCAGAGCGCCCACCAATTGGTATAGCCCAACAGTGGATCCAGAGTAAGAGGGAAGCCATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CAA 90 bp | TGCAGCCCCAGCTGCTTGTTATCTTTCAACTTCTGCACTACAACTTaGGCAAACTCTTCTCCTTGGATGTCAGACGTATCTAGCAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: CSPSCLLSFNFCTTT*ANSSPWMSDVSSSC Trigger: ACAGCTGCTAGATACGTCTGACATCCAAGGAGAAGAGTTTGCCAAAGTTGTAGTGCAGAAGTTGAAAGATAACAAGCAGCTGGGGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCGTCAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCATACCATCCCAGCTGTaGTTTCCAGGACAGTGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SRQVDKSNLGKSNTERRGIPSQL*FPGQWC Trigger: ACACCACTGTCCTGGAAACCACAGCTGGGATGGTAT...GCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTGACGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTGACTTCCTCCCAAAGAAGGCCCCCTTACAAGCTTTTATTCTGAGGGAAATTCTCTGGATCCACTGTTaGGCTATACCAATTGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TDFLPKKAPLQAFILREILWIHC*AIPIGG Trigger: CCCACCAATTGGTATAGCCCAACAGTGGATCCAGAG...AATTTCCCTCAGAATAAAAGCTTGTAAGGGGGCCTTCTTTGGGAGGAAGTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCCGACATGTGGAGGAGTGTACCTaGCTTCAGTTCAAAAACCAT | + |
|
Preference number: 2 (lower is better) Translates to: QVDKSNLGKSNTERRGRHVEECT*LQFKNH Trigger: ATGGTTTTTGAACTGAAGGCAGGTACACTCCTCCAC...ATGTCGGCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTCGTCAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCAACTCTTTGGAGATCTaGACTTGGGATTGGCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: SRQVDKSNLGKSNTERRGNSLEI*TWDWQM Trigger: CATTTGCCAATCCCAAGTTCAGATCTCCAAAGAGTT...GCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTGACGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAGAGACTCTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTGGGAGCCTGAATCACTaGTATGTAAAGTCAAACTGC | + |
|
Preference number: 2 (lower is better) Translates to: GKRLFHQPSVKRLILSCFGSLNH*YVKSNC Trigger: GCAGTTTGACTTTACATAGCAGTGATTCAGGCTCCC...AAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAGAGTCTCTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTCTATACAAATAAGGGCGTCCAGCGATTaGTTAAGGCAGGCTTCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LPSTFSEASNTLMFSIQIRASSD*LRQASV Trigger: GACTGAAGCCTGCCTTAACCAATCGCTGGACGCCCT...TATTTGTATAGAAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGTCTTCCATCAGAAACAAAGGCCACTTTAAGGCACTGTTACATACTAGAAAAGCCTACACAAGTAGATaGGATTACAGGATGGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: VSSIRNKGHFKALLHTRKAYTSR*DYRMVP Trigger: TGGTACCATCCTGTAATCCCATCTACTTGTGTAGGC...TTTTCTAGTATGTAACAGTGCCTTAAAGTGGCCTTTGTTTCTGATGGAAGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTCTATACAAATAATACTCTACATTCCTTaGGACCACCTGCTAAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LPSTFSEASNTLMFSIQIILYIP*DHLLKN Trigger: ATTCTTTAGCAGGTGGTCTCAAGGAATGTAGAGTAT...TATTTGTATAGAAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR CCA 72 bp | ACAGGAGCCGGAAGCAGGCTGCAGCAGGATGCACAATaGGCTGCTCGCTCTGGAGACAGACAGGAGGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TGAGSRLQQDAQ*AARSGDRQEAK Trigger: TTTTGCCTCCTGTCTGTCTCCAGAGCGAGCAGCCCATTGTGCATCCTGCTGCAGCCTGCTTCCGGCTCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR CCA 72 bp | CGAGGAGGCCCTGCGATCACAGAAGGCTGCCCCTGGTaGTACAGAAACGATACCATCCCAGCTGTGGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RGGPAITEGCPW*YRNDTIPAVVS Trigger: GGAAACCACAGCTGGGATGGTATCGTTTCTGTACCACCAGGGGCAGCCTTCTGTGATCGCAGGGCCTCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CCA 72 bp | ACACGAGGAGGCCCTGCGATCACAGAAGGCTGCCCCTaGTGGTACAGAAACGATACCATCCCAGCTGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TRGGPAITEGCP*WYRNDTIPAVV Trigger: AACCACAGCTGGGATGGTATCGTTTCTGTACCACCAGGGGCAGCCTTCTGTGATCGCAGGGCCTCCTCGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CCA 72 bp | GCCCCTGGTGGTACAGAAACGATACCATCCCAGCTGTaGTTTCCAGGACAGTGGTGTGCCTTCAACGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: APGGTETIPSQL*FPGQWCAFNEE Trigger: CTCTTCGTTGAAGGCACACCACTGTCCTGGAAACCACAGCTGGGATGGTATCGTTTCTGTACCACCAGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR GCA 72 bp | GATACCATCCCAGCTGTGGTTTCCAGGACAGTGGTGTaGCTTCAACGAAGAGCAGTCTTGAGGTGCTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DTIPAVVSRTVV*LQRRAVLRCSR Trigger: TCTGGAGCACCTCAAGACTGCTCTTCGTTGAAGGCACACCACTGTCCTGGAAACCACAGCTGGGATGGTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR GCA 72 bp | ATGGACTTATTACAGCCAAGGAACACGAGGAGGCCCTaGGATCACAGAAGGCTGCCCCTGGTGGTACAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: MDLLQPRNTRRP*DHRRLPLVVQK Trigger: TTTCTGTACCACCAGGGGCAGCCTTCTGTGATCGCAGGGCCTCCTCGTGTTCCTTGGCTGTAATAAGTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CCA 72 bp | GCGTCCAGCGATTGGTTAAGGCAGGCTTCAGTCATCTaGCTCACAATGGCTTCCCTCTTACTCTGGATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ASSDWLRQASVI*LTMASLLLWIH Trigger: GTGGATCCAGAGTAAGAGGGAAGCCATTGTGAGCCAGATGACTGAAGCCTGCCTTAACCAATCGCTGGACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CCA 72 bp | ATGATCAGGTCACGAGACAGAAGGGCGTCCAGCGATTaGTTAAGGCAGGCTTCAGTCATCTGGCTCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: MIRSRDRRASSD*LRQASVIWLTM Trigger: CATTGTGAGCCAGATGACTGAAGCCTGCCTTAACCAATCGCTGGACGCCCTTCTGTCTCGTGACCTGATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CCA 72 bp | CTCACAATGGCTTCCCTCTTACTCTGGATCCACTGTTaGGCTATACCAATTGGTGGGCGCTCTGAACCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LTMASLLLWIHC*AIPIGGRSEPF Trigger: GAAAGGTTCAGAGCGCCCACCAATTGGTATAGCCCAACAGTGGATCCAGAGTAAGAGGGAAGCCATTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCCGACATGATCTGAACTTGGGATaGGCAAATGGGGAGCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QVDKSNLGKSNTERRGRHDLNLG*ANGEPE Trigger: TTCAGGCTCCCCATTTGCCAATCCCAAGTTCAGATC...ATGTCGGCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGACTTCCTCCCAAAGAAGGCCCCCTTACAAGCTTTTATTCTGAGGGAAATTACTCTGGATCCACTGTaGGGCTATACCAATTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TDFLPKKAPLQAFILREITLDPL*GYTNWW Trigger: CCACCAATTGGTATAGCCCAACAGTGGATCCAGAGT...AATTTCCCTCAGAATAAAAGCTTGTAAGGGGGCCTTCTTTGGGAGGAAGTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR TCA 72 bp | AAGGCCCCCTTACAAGCTTTTATTCTGAGGGAAATTTaGAGGCGGTGCTTTGGAAAGCACAGGTACTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KAPLQAFILREI*RRCFGKHRYFW Trigger: CCAGAAGTACCTGTGCTTTCCAAAGCACCGCCTTCAAATTTCCCTCAGAATAAAAGCTTGTAAGGGGGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGCTGTGTGGAGGAGTGTACCTGCCTTCAGTTCAAAAACCATGGTGTTTTACTTTGGAGATCTGAACTaGGGATTGGCAAATGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LAVWRSVPAFSSKTMVFYFGDLN*GLANGE Trigger: CTCCCCATTTGCCAATCCCAAGTTCAGATCTCCAAA...GTAAAACACCATGGTTTTTGAACTGAAGGCAGGTACACTCCTCCACACAGCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGTCTTCCATCAGAAACAAAGGCCACTTTAAGGCACTGTTACATACTAGAAGTATCCATGCTGGCCTaGAGCTCACACTGTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KCLPSETKATLRHCYILEVSMLA*SSHCSP Trigger: TGGGCTACAGTGTGAGCTCAAGGCCAGCATGGATAC...TTCTAGTATGTAACAGTGCCTTAAAGTGGCCTTTGTTTCTGATGGAAGACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR TCA 72 bp | AGCAGAGAGGATCCACACGATTCCTCCTGTGGGGGATaGTTTGCAGGTATGTTTAGCGATAAATCCATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SREDPHDSSCGG*FAGMFSDKSIF Trigger: GAAAATGGATTTATCGCTAAACATACCTGCAAATCATCCCCCACAGGAGGAATCGTGTGGATCCTCTCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR TCA 72 bp | AAGTCAAACTTAAAACCGAGTAACTCTTTGGAGATCTaGACTTGGGATTGGCAAATGGGGAGCCTGAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: KSNLKPSNSLEI*TWDWQMGSLNH Trigger: GTGATTCAGGCTCCCCATTTGCCAATCCCAAGTTCAGATCTCCAAAGAGTTACTCGGTTTTAAGTTTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR CCA 72 bp | AACTTCTGCACTACAACTTTGGCAAACTCTTCTCCTTaGATGTCAGACGTATCTAGCAGCTGTCTGACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: NFCTTTLANSSP*MSDVSSSCLTF Trigger: AAAAGTCAGACAGCTGCTAGATACGTCTGACATCCAAGGAGAAGAGTTTGCCAAAGTTGTAGTGCAGAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTCTATACAAATATATTCTGAGGGAAATTaGAAGGCGGTGCTTTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LPSTFSEASNTLMFSIQIYSEGN*KAVLWK Trigger: TTTCCAAAGCACCGCCTTCAAATTTCCCTCAGAATA...TATTTGTATAGAAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS-3UTR TCA 90 bp | TCTCGTCAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCCAGAGGCGCCCCGGCTaGGGTAGTGCAGGTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SRQVDKSNLGKSNTERRGQRRPG*GSAGRR Trigger: TCGCCGACCTGCACTACCTCAGCCGGGGCGCCTCTG...GCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTGACGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGCGTCCAGCGATTGGTTAAGGCAGGCTTCAGTCATCTGGCTCACAATGGCGGATGGTCTTTCATCTaGGTTTTGCGCCCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KGVQRLVKAGFSHLAHNGGWSFI*VLRPST Trigger: AGTGGATGGGCGCAAAACCCAGATGAAAGACCATCC...GCCATTGTGAGCCAGATGACTGAAGCCTGCCTTAACCAATCGCTGGACGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| 3UTR CAA 72 bp | CATGATCAGGTCACGAGACAGAAGGGCGTCCAGCGATaGGTTAAGGCAGGCTTCAGTCATCTGGCTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: HDQVTRQKGVQR*VKAGFSHLAHN Trigger: ATTGTGAGCCAGATGACTGAAGCCTGCCTTAACCAATCGCTGGACGCCCTTCTGTCTCGTGACCTGATCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS-3UTR TCA 90 bp | GTGTCTTCCATCAGAAACAAAGGCCACTTTAAGGCACTGTTACATACTAGAAAACAGAGGCGCCCCGGCTaGGGTAGTGCAGGTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSSIRNKGHFKALLHTRKQRRPG*GSAGRR Trigger: TCGCCGACCTGCACTACCTCAGCCGGGGCGCCTCTG...TTTTCTAGTATGTAACAGTGCCTTAAAGTGGCCTTTGTTTCTGATGGAAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR TCA 90 bp | GAATGGACTTATTACAGCCAAGGAACACGAGGAGGCCCTGCGATCACAGAAGGCCAGGTGGCATATAGATaGTTGTTCCTCCTTCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EWTYYSQGTRGGPAITEGQVAYR*LFLLRV Trigger: CACCCGAAGGAGGAACAATCATCTATATGCCACCTG...GCCTTCTGTGATCGCAGGGCCTCCTCGTGTTCCTTGGCTGTAATAAGTCCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTCGCTCTGGAGACAGACAGGAGGCAAAAGTTAAGCAGAGGTCCACGGCTGTCTGCAAAGGATTGGTaGCCTCTTCAAAAGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLALETDRRQKLSRGPRLSAKDW*PLQKAV Trigger: AACAGCCTTTTGAAGAGGTCACCAATCCTTTGCAGA...CAGCCGTGGACCTCTGCTTAACTTTTGCCTCCTGTCTGTCTCCAGAGCGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CCA 90 bp | ATCACAGAAGGCTGCCCCTGGTGGTACAGAAACGATACCATCCCAGCTGTGGTTTCAGGTCGATGTCCCTaGGACACACTGTACATGATC | + |
|
Preference number: 4 (lower is better) Translates to: ITEGCPWWYRNDTIPAVVSGRCP*DTLYMI Trigger: GATCATGTACAGTGTGTCCCAGGGACATCGACCTGA...AACCACAGCTGGGATGGTATCGTTTCTGTACCACCAGGGGCAGCCTTCTGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGCGTCCAGCGATTGGTTAAGGCAGGCTTCAGTCATCTGGCTCACAATGGCCTTTCATCTGGGTTTTaGGCCCATCCACTCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: KGVQRLVKAGFSHLAHNGLSSGF*AHPLCI Trigger: AATACAGAGTGGATGGGCGCAAAACCCAGATGAAAG...GCCATTGTGAGCCAGATGACTGAAGCCTGCCTTAACCAATCGCTGGACGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS-3UTR GCA 90 bp | TCTCGTCAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCAACACGAGGAGGCCCTaGGATCACAGAAGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRQVDKSNLGKSNTERRGNTRRP*DHRRLP Trigger: GGGCAGCCTTCTGTGATCGCAGGGCCTCCTCGTGTT...GCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTGACGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR TCA 90 bp | CTGCTCGCTCTGGAGACAGACAGGAGGCAAAAGTTAAGCAGAGGTCCACGGCTGGTATTAGAGAGATCATaGGACCTCGATGAGGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: LLALETDRRQKLSRGPRLVLERS*DLDEVY Trigger: ATATACCTCATCGAGGTCTCATGATCTCTCTAATAC...CAGCCGTGGACCTCTGCTTAACTTTTGCCTCCTGTCTGTCTCCAGAGCGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCCGACATGTGTGGATGTGTAGGTaGTTCACTGCCACCCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: QVDKSNLGKSNTERRGRHVWMCR*FTATRT Trigger: CGTGCGGGTGGCAGTGAAGCACCTACACATCCACAC...ATGTCGGCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTCGCTCTGGAGACAGACAGGAGGCAAAAGTTAAGCAGAGGTCCACGGCTGGAATCTCAATGGCCATaGAATATCAGGATATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLALETDRRQKLSRGPRLESQWP*NIRIFS Trigger: ACTGAATATCCTGATATTGCATGGCCATTGAGATTC...CAGCCGTGGACCTCTGCTTAACTTTTGCCTCCTGTCTGTCTCCAGAGCGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CCA 90 bp | TCTCGTCAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCTCGAGCAGCGGCGTGTaGATGTGTAGGTGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SRQVDKSNLGKSNTERRGSSSGV*MCRCFT Trigger: AGTGAAGCACCTACACATCCACACGCCGCTGCTCGA...GCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTGACGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCCGACATTCGAGCAGCGGCGTGTaGATGTGTAGGTGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: QVDKSNLGKSNTERRGRHSSSGV*MCRCFT Trigger: AGTGAAGCACCTACACATCCACACGCCGCTGCTCGA...ATGTCGGCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGCGTCCAGCGATTGGTTAAGGCAGGCTTCAGTCATCTGGCTCACAATGGCGAATCTCAATGGCCATaGAATATCAGGATATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGVQRLVKAGFSHLAHNGESQWP*NIRIFS Trigger: ACTGAATATCCTGATATTGCATGGCCATTGAGATTC...GCCATTGTGAGCCAGATGACTGAAGCCTGCCTTAACCAATCGCTGGACGCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCTTCCATCAGAAACAAAGGCCACTTTAAGGCACTGTTACATACTAGAAGTGTGGATGTGTAGGTaGTTCACTGCCACCCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: KCLPSETKATLRHCYILEVWMCR*FTATRT Trigger: CGTGCGGGTGGCAGTGAAGCACCTACACATCCACAC...TTCTAGTATGTAACAGTGCCTTAAAGTGGCCTTTGTTTCTGATGGAAGACACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR GCA 90 bp | GTCATCTGGCTCACAATGGCTTCCCTCTTACTCTGGATCCACTGTTGGGCTATAACACTGTACATGATCTaGAAAGGATTGGTGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VIWLTMASLLLWIHCWAITLYMI*KGLVTS Trigger: AGAGGTCACCAATCCTTTGCAGATCATGTACAGTGT...TATAGCCCAACAGTGGATCCAGAGTAAGAGGGAAGCCATTGTGAGCCAGATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCCGACATGGATGGTCTTTCATCTaGGTTTTGCGCCCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QVDKSNLGKSNTERRGRHGWSFI*VLRPST Trigger: AGTGGATGGGCGCAAAACCCAGATGAAAGACCATCC...ATGTCGGCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CCA 90 bp | TCTCGTCAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCCTCTGGATCCACTGTTaGGCTATACCAATTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRQVDKSNLGKSNTERRGLWIHC*AIPIGG Trigger: CCCACCAATTGGTATAGCCCAACAGTGGATCCAGAG...GCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTGACGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| 3UTR CAA 72 bp | GAAGGCCCCCTTACAAGCTTTTATTCTGAGGGAAATTaGAAGGCGGTGCTTTGGAAAGCACAGGTACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGPLTSFYSEGN*KAVLWKAQVLL Trigger: CAGAAGTACCTGTGCTTTCCAAAGCACCGCCTTCAAATTTCCCTCAGAATAAAAGCTTGTAAGGGGGCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS-3UTR TCA 90 bp | GTCATCTGGCTCACAATGGCTTCCCTCTTACTCTGGATCCACTGTTGGGCTATAGTATTAGAGAGATCATaGGACCTCGATGAGGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: VIWLTMASLLLWIHCWAIVLERS*DLDEVY Trigger: ATATACCTCATCGAGGTCTCATGATCTCTCTAATAC...TATAGCCCAACAGTGGATCCAGAGTAAGAGGGAAGCCATTGTGAGCCAGATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCTGTGTGGAGGAGTGTACCTGCCTTCAGTTCAAAAACCATGGTGTTTTACCATAGTCCTCCTTCATaGTCAGGTCACGAGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LAVWRSVPAFSSKTMVFYHSPPS*SGHETE Trigger: TTCTGTCTCGTGACCTGATCATGAAGGAGGACTATG...GTAAAACACCATGGTTTTTGAACTGAAGGCAGGTACACTCCTCCACACAGCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR CCA 90 bp | GGGAAGAGACTCTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTTCAGGTCGATGTCCCTaGGACACACTGTACATGATC | + |
|
Preference number: 4 (lower is better) Translates to: GKRLFHQPSVKRLILSCFSGRCP*DTLYMI Trigger: GATCATGTACAGTGTGTCCCAGGGACATCGACCTGA...AAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAGAGTCTCTTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CCA 90 bp | TCTCGTCAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCGCTTCCCTCTTACTCTaGATCCACTGTTGGGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: SRQVDKSNLGKSNTERRGASLLL*IHCWAI Trigger: TATAGCCCAACAGTGGATCCAGAGTAAGAGGGAAGC...GCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTGACGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCTTCCATCAGAAACAAAGGCCACTTTAAGGCACTGTTACATACTAGAAAGGGCGTCCAGCGATTaGTTAAGGCAGGCTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KCLPSETKATLRHCYILERASSD*LRQASV Trigger: GACTGAAGCCTGCCTTAACCAATCGCTGGACGCCCT...TTCTAGTATGTAACAGTGCCTTAAAGTGGCCTTTGTTTCTGATGGAAGACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR CCA 90 bp | CAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCCGACATTTGAAGGCGGTGCTTTaGAAAGCACAGGTACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVDKSNLGKSNTERRGRHLKAVL*KAQVLL Trigger: CAGAAGTACCTGTGCTTTCCAAAGCACCGCCTTCAA...ATGTCGGCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR TCA 90 bp | GGGAAGAGACTCTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTCAGCTGTCTGACTTTTaGGGTCCTTGTAGGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GKRLFHQPSVKRLILSCFQLSDF*GPCRFG Trigger: ACCAAACCTACAAGGACCTCAAAAGTCAGACAGCTG...AAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAGAGTCTCTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR GCA 90 bp | TTAGCTGTGTGGAGGAGTGTACCTGCCTTCAGTTCAAAAACCATGGTGTTTTACCAATTTCATGCAGGATaGGGAATCTCAATGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LAVWRSVPAFSSKTMVFYQFHAG*GISMAM Trigger: CATGGCCATTGAGATTCCGCATCCTGCATGAAATTG...GTAAAACACCATGGTTTTTGAACTGAAGGCAGGTACACTCCTCCACACAGCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR GCA 90 bp | GACGTATCTAGCAGCTGTCTGACTTTTGAGGTCCTTGTAGGTTTGGTGCTAATGCCAAGAGCAATTTCATaGAGGATGCGGAATCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DVSSSCLTFEVLVGLVLMPRAIS*RMRNLN Trigger: ATTGAGATTCCGCATCCTGCATGAAATTGCTCTTGG...CATTAGCACCAAACCTACAAGGACCTCAAAAGTCAGACAGCTGCTAGATACGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCTTCCATCAGAAACAAAGGCCACTTTAAGGCACTGTTACATACTAGAAAATCCAGGACAGTGGTGTaGCTTCAACGAAGAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSIRNKGHFKALLHTRKSRTVV*LQRRAV Trigger: GACTGCTCTTCGTTGAAGGCACACCACTGTCCTGGA...TTTTCTAGTATGTAACAGTGCCTTAAAGTGGCCTTTGTTTCTGATGGAAGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR CCA 90 bp | GGGAAGAGACTCTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTTCATCTGGCTCACAATaGCTTCCCTCTTACTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKRLFHQPSVKRLILSCFSSGSQ*LPSYSG Trigger: TCCAGAGTAAGAGGGAAGCCATTGTGAGCCAGATGA...AAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAGAGTCTCTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR GCA 90 bp | TTAGCTGTGTGGAGGAGTGTACCTGCCTTCAGTTCAAAAACCATGGTGTTTTACCCAAGAGCAATTTCATaGAGGATGCGGAATCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LAVWRSVPAFSSKTMVFYPRAIS*RMRNLN Trigger: ATTGAGATTCCGCATCCTGCATGAAATTGCTCTTGG...GTAAAACACCATGGTTTTTGAACTGAAGGCAGGTACACTCCTCCACACAGCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR GCA 90 bp | CGTCAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCCGAGAGAGAGTGACATCATaGGCCATTTTGATAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RQVDKSNLGKSNTERRGRERVTS*AILINQ Trigger: TTGGTTTATCAAAATGGCGCATGATGTCACTCTCTC...TCGGCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CCA 90 bp | GGAATCCGCAGAGAAGGTGAGTGTGAAAGTGTCTTCCATCAGAAACAAAGGCCAATGAGGTATATCAAATaGCAAATTCTCCTCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIRREGECESVFHQKQRPMRYIK*QILLTG Trigger: ACCAGTGAGGAGAATTTGCCATTTGATATACCTCAT...TGGCCTTTGTTTCTGATGGAAGACACTTTCACACTCACCTTCTCTGCGGATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCTTCCATCAGAAACAAAGGCCACTTTAAGGCACTGTTACATACTAGAATGGTTTCCAGGACAGTaGTGTGCCTTCAACGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCLPSETKATLRHCYILEWFPGQ*CAFNEE Trigger: CTCTTCGTTGAAGGCACACCACTGTCCTGGAAACCA...TTCTAGTATGTAACAGTGCCTTAAAGTGGCCTTTGTTTCTGATGGAAGACACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR CCA 90 bp | GGGAAGAGACTCTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTGCAAACTCTTCTCCTTaGATGTCAGACGTATCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKRLFHQPSVKRLILSCFANSSP*MSDVSS Trigger: GCTAGATACGTCTGACATCCAAGGAGAAGAGTTTGC...AAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAGAGTCTCTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| 3UTR CAA 72 bp | GAGAGGATCCACACGATTCCTCCTGTGGGGGATGATTaGCAGGTATGTTTAGCGATAAATCCATTTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ERIHTIPPVGDD*QVCLAINPFSY Trigger: ATAAGAAAATGGATTTATCGCTAAACATACCTGCAAATCATCCCCCACAGGAGGAATCGTGTGGATCCTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS-3UTR TCA 90 bp | TCTCGTCAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCTACAAGCTTTTATTCTaGGGGAAATTTGAAGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRQVDKSNLGKSNTERRGYKLLF*GKFEGG Trigger: ACCGCCTTCAAATTTCCCTCAGAATAAAAGCTTGTA...GCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTGACGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR GCA 90 bp | CAAGTTGATAAGAGCAATCTTGGAAAATCAAACACAGAGAGGCGTGGCCGACATGAGAGAGTGACATCATaGGCCATTTTGATAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: QVDKSNLGKSNTERRGRHERVTS*AILINQ Trigger: TTGGTTTATCAAAATGGCGCATGATGTCACTCTCTC...ATGTCGGCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAGAGACTCTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTACACTGTACATGATCTaGAAAGGATTGGTGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKRLFHQPSVKRLILSCFTLYMI*KGLVTS Trigger: AGAGGTCACCAATCCTTTGCAGATCATGTACAGTGT...AAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAGAGTCTCTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTCTATACAAATAGAAGGCTGCCCCTGGTaGTACAGAAACGATACCATC | + |
|
Preference number: 4 (lower is better) Translates to: LPSTFSEASNTLMFSIQIEGCPW*YRNDTI Trigger: GATGGTATCGTTTCTGTACCACCAGGGGCAGCCTTC...TATTTGTATAGAAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR TCA 90 bp | CTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTCTATACAAATACAGGTGGCATATAGATaGTTGTTCCTCCTTCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSTFSEASNTLMFSIQIQVAYR*LFLLRV Trigger: CACCCGAAGGAGGAACAATCATCTATATGCCACCTG...TATTTGTATAGAAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGTCTTCCATCAGAAACAAAGGCCACTTTAAGGCACTGTTACATACTAGAACTTTCATCTGGGTTTTaGGCCCATCCACTCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: KCLPSETKATLRHCYILELSSGF*AHPLCI Trigger: AATACAGAGTGGATGGGCGCAAAACCCAGATGAAAG...TTCTAGTATGTAACAGTGCCTTAAAGTGGCCTTTGTTTCTGATGGAAGACACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTCTATACAAATAATACCATCCCAGCTGTaGTTTCCAGGACAGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPSTFSEASNTLMFSIQIIPSQL*FPGQWC Trigger: ACACCACTGTCCTGGAAACCACAGCTGGGATGGTAT...TATTTGTATAGAAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| 3UTR CAA 72 bp | TTTTTATTGTTTCTCGTCAAGTTGATAAGAGCAATCTaGGAAAATCAAACACAGAGAGGCGTGGCCGACATG | + |
|
Preference number: 4 (lower is better) Translates to: FLLFLVKLIRAI*ENQTQRGVADM Trigger: CATGTCGGCCACGCCTCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTGACGAGAAACAATAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| 3UTR CAA 72 bp | GCACACTGTATTGCCTTTTTATTGTTTCTCGTCAAGTaGATAAGAGCAATCTTGGAAAATCAAACACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHCIAFLLFLVK*IRAILENQTQR Trigger: TCTCTGTGTTTGATTTTCCAAGATTGCTCTTATCAACTTGACGAGAAACAATAAAAAGGCAATACAGTGTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS GCA 90 bp | ATATCATTTCTTTCACTGTCGAGCAGCGGCGTGTGGATGTGTAGGTaGTTCACTGCCACCCGCACGCGCCAGTCTGCGTGTCGTGCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISFLSLSSSGVWMCR*FTATRTRQSACRAD Trigger: GTCGGCACGACACGCAGACTGGCGCGTGCGGGTGGCAGTGAAGCACCTACACATCCACACGCCGCTGCTCGACAGTGAAAGAAATGATAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CAA 90 bp | GACGTATCTAGCAGCTGTCTGACTTTTGAGGTCCTTGTAGGTTTGGTGCTAATGGCTTCACACTGGCCCTaGATTTCTGTCCTGGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DVSSSCLTFEVLVGLVLMASHWP*ISVLAH Trigger: ATGAGCCAGGACAGAAATCAAGGGCCAGTGTGAAGC...CATTAGCACCAAACCTACAAGGACCTCAAAAGTCAGACAGCTGCTAGATACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS CCA 90 bp | ATATCAAATGGCAAATTCTCCTCACTGGTGTCAGGTCGATGTCCCTaGGACACACTGTACATGATCTGCAAAGGATTGGTGACCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISNGKFSSLVSGRCP*DTLYMICKGLVTSS Trigger: TGAAGAGGTCACCAATCCTTTGCAGATCATGTACAGTGTGTCCCAGGGACATCGACCTGACACCAGTGAGGAGAATTTGCCATTTGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CAA 90 bp | GGAATCCGCAGAGAAGGTGAGTGTGAAAGTGTCTTCCATCAGAAACAAAGGCCATTCTGCACTACAACTTaGGCAAACTCTTCTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GIRREGECESVFHQKQRPFCTTT*ANSSPW Trigger: CCAAGGAGAAGAGTTTGCCAAAGTTGTAGTGCAGAA...TGGCCTTTGTTTCTGATGGAAGACACTTTCACACTCACCTTCTCTGCGGATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR CAA 90 bp | TTAGCTGTGTGGAGGAGTGTACCTGCCTTCAGTTCAAAAACCATGGTGTTTTACTCTTTCATCTGGGTTTaGCGCCCATCCACTCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LAVWRSVPAFSSKTMVFYSFIWV*RPSTLY Trigger: ATACAGAGTGGATGGGCGCAAAACCCAGATGAAAGA...GTAAAACACCATGGTTTTTGAACTGAAGGCAGGTACACTCCTCCACACAGCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS TCA 90 bp | TTTCATCTGGGTTTTGCGCCCATCCACTCTGTATTAGAGAGATCATaGGACCTCGATGAGGTATATCAAATGGCAAATTCTCCTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: FHLGFAPIHSVLERS*DLDEVYQMANSPHW Trigger: CCAGTGAGGAGAATTTGCCATTTGATATACCTCATCGAGGTCTCATGATCTCTCTAATACAGAGTGGATGGGCGCAAAACCCAGATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGTCTTCCATCAGAAACAAAGGCCACTTTAAGGCACTGTTACATACTAGAAGCTTCACACTGGCCCTaGATTTCTGTCCTGGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KCLPSETKATLRHCYILEASHWP*ISVLAH Trigger: ATGAGCCAGGACAGAAATCAAGGGCCAGTGTGAAGC...TTCTAGTATGTAACAGTGCCTTAAAGTGGCCTTTGTTTCTGATGGAAGACACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTCTATACAAATAAAGGGCGTCCAGCGATaGGTTAAGGCAGGCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPSTFSEASNTLMFSIQIKGVQR*VKAGFS Trigger: ACTGAAGCCTGCCTTAACCAATCGCTGGACGCCCTT...TATTTGTATAGAAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR CAA 90 bp | TCAACGAAGAGCAGTCTTGAGGTGCTCCAGATAAAAATCCCTTGTCTTGAGGAGACATCATGCGCCATTTaGATAAACCAAAATCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: STKSSLEVLQIKIPCLEETSCAI*INQNLQ Trigger: TTGCAGATTTTGGTTTATCAAAATGGCGCATGATGT...CTCCTCAAGACAAGGGATTTTTATCTGGAGCACCTCAAGACTGCTCTTCGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183871.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCTTCCATCAGAAACAAAGGCCACTTTAAGGCACTGTTACATACTAGAAAATTTGAAGGCGGTGCTTaGGAAAGCACAGGTACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSSIRNKGHFKALLHTRKFEGGA*ESTGTS Trigger: AGAAGTACCTGTGCTTTCCAAAGCACCGCCTTCAAA...TTTTCTAGTATGTAACAGTGCCTTAAAGTGGCCTTTGTTTCTGATGGAAGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR CAA 90 bp | GGGAAGAGACTCTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTTATTCTGAGGGAAATTaGAAGGCGGTGCTTTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GKRLFHQPSVKRLILSCFYSEGN*KAVLWK Trigger: TTTCCAAAGCACCGCCTTCAAATTTCCCTCAGAATA...AAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAGAGTCTCTTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS-3UTR CAA 90 bp | CTTCCATCAACCTTCAGTGAAGCGTCTAATACTCTCATGTTTTCTATACAAATAACTCTGGATCCACTGTaGGGCTATACCAATTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSTFSEASNTLMFSIQITLDPL*GYTNWW Trigger: CCACCAATTGGTATAGCCCAACAGTGGATCCAGAGT...TATTTGTATAGAAAACATGAGAGTATTAGACGCTTCACTGAAGGTTGATGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037035.12 |
||
| CDS GCA 90 bp | TCATATTGTGCAGATAATTTACACCAAGAGCAATTTCATGCAGGATaGGGAATCTCAATGGCCATGCAATATCAGGATATTCAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SYCADNLHQEQFHAG*GISMAMQYQDIQFF Trigger: GAAAAACTGAATATCCTGATATTGCATGGCCATTGAGATTCCGCATCCTGCATGAAATTGCTCTTGGTGTAAATTATCTGCACAATATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCTTCCATCAGAAACAAAGGCCACTTTAAGGCACTGTTACATACTAGAAAAACATCATGCGCCATTTaGATAAACCAAAATCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VSSIRNKGHFKALLHTRKTSCAI*INQNLQ Trigger: TTGCAGATTTTGGTTTATCAAAATGGCGCATGATGT...TTTTCTAGTATGTAACAGTGCCTTAAAGTGGCCTTTGTTTCTGATGGAAGACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS GCA 72 bp | CTTCACTGCCACCCGCACGCGCCAGTCTGCGTGTCGTaGCGACGAGACCGTGCCAGAGGCGCCCCGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LHCHPHAPVCVS*RRDRARGAPAE Trigger: CTCAGCCGGGGCGCCTCTGGCACGGTCTCGTCGGCACGACACGCAGACTGGCGCGTGCGGGTGGCAGTGAAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS TCA 72 bp | GTCGTGCCGACGAGACCGTGCCAGAGGCGCCCCGGCTaGGGTAGTGCAGGTCGGCGAGCTTGTGGTACGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VVPTRPCQRRPG*GSAGRRACGTG Trigger: TCCCGTACCACAAGCTCGCCGACCTGCACTACCTCAGCCGGGGCGCCTCTGGCACGGTCTCGTCGGCACGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS GCA 72 bp | CTTTCACTGTCGAGCAGCGGCGTGTGGATGTGTAGGTaGTTCACTGCCACCCGCACGCGCCAGTCTGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSLSSSGVWMCR*FTATRTRQSAC Trigger: ACACGCAGACTGGCGCGTGCGGGTGGCAGTGAAGCACCTACACATCCACACGCCGCTGCTCGACAGTGAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS CCA 72 bp | AAGATATCATTTCTTTCACTGTCGAGCAGCGGCGTGTaGATGTGTAGGTGCTTCACTGCCACCCGCACGCGC | + |
|
Preference number: 6 (lower is better) Translates to: KISFLSLSSSGV*MCRCFTATRTR Trigger: GCGCGTGCGGGTGGCAGTGAAGCACCTACACATCCACACGCCGCTGCTCGACAGTGAAAGAAATGATATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS CCA 72 bp | GGCAAATTCTCCTCACTGGTGTCAGGTCGATGTCCCTaGGACACACTGTACATGATCTGCAAAGGATTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GKFSSLVSGRCP*DTLYMICKGLV Trigger: CACCAATCCTTTGCAGATCATGTACAGTGTGTCCCAGGGACATCGACCTGACACCAGTGAGGAGAATTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS CCA 72 bp | CTCGATGAGGTATATCAAATGGCAAATTCTCCTCACTaGTGTCAGGTCGATGTCCCTGGGACACACTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: LDEVYQMANSPH*CQVDVPGTHCT Trigger: TGTACAGTGTGTCCCAGGGACATCGACCTGACACCAGTGAGGAGAATTTGCCATTTGATATACCTCATCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS CAA 72 bp | CTGCATAGCTGTATATATCATGCTTCACACTGGCCCTaGATTTCTGTCCTGGCTCATAGTTCTCAGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LHSCIYHASHWP*ISVLAHSSQVA Trigger: TGCCACCTGAGAACTATGAGCCAGGACAGAAATCAAGGGCCAGTGTGAAGCATGATATATACAGCTATGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS TCA 72 bp | GGTTTTGCGCCCATCCACTCTGTATTAGAGAGATCATaGGACCTCGATGAGGTATATCAAATGGCAAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: GFAPIHSVLERS*DLDEVYQMANS Trigger: AGAATTTGCCATTTGATATACCTCATCGAGGTCTCATGATCTCTCTAATACAGAGTGGATGGGCGCAAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS GCA 72 bp | AAGCATTTCAAAAAGGATGGTCTTTCATCTGGGTTTTaGGCCCATCCACTCTGTATTAGAGAGATCATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KHFKKDGLSSGF*AHPLCIREIMR Trigger: TCTCATGATCTCTCTAATACAGAGTGGATGGGCGCAAAACCCAGATGAAAGACCATCCTTTTTGAAATGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS CCA 72 bp | ACCAAGAGCAATTTCATGCAGGATGCGGAATCTCAATaGCCATGCAATATCAGGATATTCAGTTTTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TKSNFMQDAESQ*PCNIRIFSFSV Trigger: CACAGAAAAACTGAATATCCTGATATTGCATGGCCATTGAGATTCCGCATCCTGCATGAAATTGCTCTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||
| CDS GCA 72 bp | GCAGATAATTTACACCAAGAGCAATTTCATGCAGGATaGGGAATCTCAATGGCCATGCAATATCAGGATATT | + |
|
Preference number: 6 (lower is better) Translates to: ADNLHQEQFHAG*GISMAMQYQDI Trigger: AATATCCTGATATTGCATGGCCATTGAGATTCCGCATCCTGCATGAAATTGCTCTTGGTGTAAATTATCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037035.12 ENSMUST00000183871.2 |
||