Pregenerated sensors for RIPK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021408Ensembl transcript IDs: ENSMUST00000021844.15, ENSMUST00000167374.9, ENSMUST00000171137.2
Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGCTGAAAGGCCTCTGAGCCATGTGGAAGGACTGCCGTGGTGCTaGCCCCTTGGGGACAGAGTGTGCTGCATGGGAACACCTGTTCAC | + |
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Preference number: 1 (lower is better) Translates to: RAERPLSHVEGLPWC*PLGDRVCCMGTPVH Trigger: GTGAACAGGTGTTCCCATGCAGCACACTCTGTCCCCAAGGGGCCAGCACCACGGCAGTCCTTCCACATGGCTCAGAGGCCTTTCAGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR GCA 90 bp | GTGGAAGGACTGCCGTGGTGCTGGCCCCTTGGGGACAGAGTGTGCTaGATGGGAACACCTGTTCACCATCAGCATACCCTTCTGTTAGCA | + |
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Preference number: 1 (lower is better) Translates to: VEGLPWCWPLGDRVC*MGTPVHHQHTLLLA Trigger: TGCTAACAGAAGGGTATGCTGATGGTGAACAGGTGTTCCCATGCAGCACACTCTGTCCCCAAGGGGCCAGCACCACGGCAGTCCTTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR GCA 90 bp | CATGTGGAAGGACTGCCGTGGTGCTGGCCCCTTGGGGACAGAGTGTaGTGCATGGGAACACCTGTTCACCATCAGCATACCCTTCTGTTA | + |
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Preference number: 1 (lower is better) Translates to: HVEGLPWCWPLGDRV*CMGTPVHHQHTLLL Trigger: TAACAGAAGGGTATGCTGATGGTGAACAGGTGTTCCCATGCAGCACACTCTGTCCCCAAGGGGCCAGCACCACGGCAGTCCTTCCACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR GCA 90 bp | AGCCAGAACCAGCAGCAGCTCTGCAATGACAGCCAGTACCTGAGCTaGAATGACAGCCAGTACCTGAAGATCTCTCTCTGCCCTGCACCT | + |
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Preference number: 1 (lower is better) Translates to: SQNQQQLCNDSQYLS*NDSQYLKISLCPAP Trigger: AGGTGCAGGGCAGAGAGAGATCTTCAGGTACTGGCTGTCATTGCAGCTCAGGTACTGGCTGTCATTGCAGAGCTGCTGCTGGTTCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR CCA 90 bp | TGTGCTTGGGAGCAACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTaGCTCCCCTTGCTTATCTGGTTTCTGGCCAGGTATAGTCGTGCC | + |
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Preference number: 1 (lower is better) Translates to: CAWEQLSSLLSCFPA*LPLLIWFLARYSRA Trigger: GGCACGACTATACCTGGCCAGAAACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTTGCTCCCAAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR GCA 90 bp | TCATATCCAGAGAGGAGGAGATGGTATTTCCCGATCAGTGTTTCCTaGACATCTGTTCCCTCTGTGGGGCTCACAGGGTGGGAAACTGCA | + |
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Preference number: 1 (lower is better) Translates to: SYPERRRWYFPISVS*TSVPSVGLTGWETA Trigger: TGCAGTTTCCCACCCTGTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCTCCTCTCTGGATATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR CCA 90 bp | ACAGGAGAAGTAAGGCATATAAACTTACAGCAGGAAGCTGGGTGGTaGTGGCACATGCCTTTATTCCCAGCACTCAGGAGGCAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TGEVRHINLQQEAGW*WHMPLFPALRRQRQ Trigger: CTGCCTCTGCCTCCTGAGTGCTGGGAATAAAGGCATGTGCCACCACCACCCAGCTTCCTGCTGTAAGTTTATATGCCTTACTTCTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR CCA 90 bp | CTGTGTGACAGGAGAAGTAAGGCATATAAACTTACAGCAGGAAGCTaGGTGGTGGTGGCACATGCCTTTATTCCCAGCACTCAGGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: LCDRRSKAYKLTAGS*VVVAHAFIPSTQEA Trigger: TGCCTCCTGAGTGCTGGGAATAAAGGCATGTGCCACCACCACCCAGCTTCCTGCTGTAAGTTTATATGCCTTACTTCTCCTGTCACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR TCA 90 bp | TGGCATCTTGCAGATGGAGGCCAGGAATGTTCCCAAATATCCTACTaGGTACAGGATAGCCCAACAAAGGAGGATGAAGTGCCAATGAGT | + |
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Preference number: 1 (lower is better) Translates to: WHLADGGQECSQISY*VQDSPTKEDEVPMS Trigger: ACTCATTGGCACTTCATCCTCCTTTGTTGGGCTATCCTGTACTCAGTAGGATATTTGGGAACATTCCTGGCCTCCATCTGCAAGATGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR TCA 90 bp | TCATGGACCGACCATTCATTCAGCGGTCTTTATGCTTGCATGTTCTaGAGAATCACTGTGGGCTTCAGATTTCTCTTCCCATCCACCAGT | + |
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Preference number: 1 (lower is better) Translates to: SWTDHSFSGLYACMF*RITVGFRFLFPSTS Trigger: ACTGGTGGATGGGAAGAGAAATCTGAAGCCCACAGTGATTCTTCAGAACATGCAAGCATAAAGACCGCTGAATGAATGGTCGGTCCATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR CCA 90 bp | ATTTTTCTCACACCTGGTGGGTGTTGTGAGGTTGACTTGTACTGTTaGCATCTTGCAGATGGAGGCCAGGAATGTTCCCAAATATCCTAC | + |
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Preference number: 1 (lower is better) Translates to: IFLTPGGCCEVDLYC*HLADGGQECSQISY Trigger: GTAGGATATTTGGGAACATTCCTGGCCTCCATCTGCAAGATGCCAACAGTACAAGTCAACCTCACAACACCCACCAGGTGTGAGAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR TCA 90 bp | GTGGCACACAGAAGAAACATATTTGTACAGCACACTGGAGAAAACTaGGGAAACAGTTTATTGGGCACAGGGAACAGTGCTAAGGCACCA | + |
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Preference number: 1 (lower is better) Translates to: VAHRRNIFVQHTGEN*GNSLLGTGNSAKAP Trigger: TGGTGCCTTAGCACTGTTCCCTGTGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTACAAATATGTTTCTTCTGTGTGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR CCA 90 bp | ACATATTTGTACAGCACACTGGAGAAAACTGAGGAAACAGTTTATTaGGCACAGGGAACAGTGCTAAGGCACCAGTCATATCCAGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: TYLYSTLEKTEETVY*AQGTVLRHQSYPER Trigger: CCTCTCTGGATATGACTGGTGCCTTAGCACTGTTCCCTGTGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTACAAATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR TCA 90 bp | AAACTGTTCAAAGGAAAAATTGTTCAAAGACATGCATGCTCCCAGTaGCCTGCTTCTTGTAGTCAGGCCCCACCTCCTATATCTTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: KLFKGKIVQRHACSQ*PASCSQAPPPISSN Trigger: ATTGGAAGATATAGGAGGTGGGGCCTGACTACAAGAAGCAGGTCACTGGGAGCATGCATGTCTTTGAACAATTTTTCCTTTGAACAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR CCA 90 bp | TTCTTGATTGGTGGCACACAGAAGAAACATATTTGTACAGCACACTaGAGAAAACTGAGGAAACAGTTTATTGGGCACAGGGAACAGTGC | + |
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Preference number: 1 (lower is better) Translates to: FLIGGTQKKHICTAH*RKLRKQFIGHREQC Trigger: GCACTGTTCCCTGTGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTACAAATATGTTTCTTCTGTGTGCCACCAATCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR TCA 90 bp | GTACATCTTGCTGTGTTAGCTTTATGCACCACTGTGACAAACATTTaGGAACAATGTAAAAGGGGGAAAGGTTCATGGTTTCAGAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: VHLAVLALCTTVTNI*EQCKRGKGSWFQSS Trigger: AGAGCTCTGAAACCATGAACCTTTCCCCCTTTTACATTGTTCTCAAATGTTTGTCACAGTGGTGCATAAAGCTAACACAGCAAGATGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR CCA 90 bp | AACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTGTGGAAGGACTGCCGTaGTGCTGGCCCCTTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: NCRVSSLVFRPGSPCLSGVEGLP*CWPLGD Trigger: GTCCCCAAGGGGCCAGCACCACGGCAGTCCTTCCAC...ACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR CAA 90 bp | CATGGTTTCAGAGCTCTAAGCTCAAGGTCATCCGGACCCATTTCTTaGGGCCCGAGGAAAGGCAGTGCATGGTGGGAGCGGAGGCACTTA | + |
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Preference number: 2 (lower is better) Translates to: HGFRALSSRSSGPIS*GPRKGSAWWERRHL Trigger: TAAGTGCCTCCGCTCCCACCATGCACTGCCTTTCCTCGGGCCCAAAGAAATGGGTCCGGATGACCTTGAGCTTAGAGCTCTGAAACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR TCA 90 bp | CAACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGAGGCAGGCAGATCTCTaGATTGGGAGACCAATCTGG | + |
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Preference number: 2 (lower is better) Translates to: QLSSLLSCFPAWLPLLIWRQADL*IGRPIW Trigger: CCAGATTGGTCTCCCAATTCAGAGATCTGCCTGCCT...CCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR GCA 90 bp | CAACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTGTACCCCAGTCCACTaGATTCTGCTCGGCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: QLSSLLSCFPAWLPLLIWCTPVH*ILLGLG Trigger: TCCTAAGCCGAGCAGAATGCAGTGGACTGGGGTACA...CCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR CCA 90 bp | AACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTCAGCAGGAAGCTGGGTaGTGGTGGCACATGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: NCRVSSLVFRPGSPCLSGQQEAG*WWHMPL Trigger: TAAAGGCATGTGCCACCACCACCCAGCTTCCTGCTG...ACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR CCA 90 bp | AACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTTGCCAAGCCATTGTCTaGCTGTCAGTGGTGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: NCRVSSLVFRPGSPCLSGCQAIV*LSVVSL Trigger: CAGGCTCACCACTGACAGCCAGACAATGGCTTGGCA...ACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR TCA 90 bp | AACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTCAGTTCCAAACTGCATaGCCCTGTGTGCTCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: NCRVSSLVFRPGSPCLSGQFQTA*PCVLKC Trigger: GCATTTGAGCACACAGGGTCATGCAGTTTGGAACTG...ACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACAACCAGCAGCAGCTCTaGAATGACAGCCAGTACCTG | + |
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Preference number: 2 (lower is better) Translates to: MVFPDQCFLHICSLCGAHNQQQL*NDSQYL Trigger: CAGGTACTGGCTGTCATTGCAGAGCTGCTGCTGGTT...GTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAACAGTGCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATGGTATTTCCATCTGTTCCCTCTGTaGGGCTCACAGGGTGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: QGTVLRHQSYPERRRWYFHLFPL*GSQGGK Trigger: TTTCCCACCCTGTGAGCCCCACAGAGGGAACAGATG...GAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGCACTGTTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACCAGTTCCAAACTGCATaGCCCTGTGTGCTCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: MVFPDQCFLHICSLCGAHQFQTA*PCVLKC Trigger: GCATTTGAGCACACAGGGTCATGCAGTTTGGAACTG...GTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAAGCCTGGAACCTTCCCTGCTCCAATTCCCTTCCACTGTGCATGTTCCAATCTGGTCTACAAAGTaGGTTCCAGGACAGCGAGAA | + |
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Preference number: 2 (lower is better) Translates to: QESLEPSLLQFPSTVHVPIWSTK*VPGQRE Trigger: TTCTCGCTGTCCTGGAACTCACTTTGTAGACCAGAT...TGGAACATGCACAGTGGAAGGGAATTGGAGCAGGGAAGGTTCCAGGCTTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCACCAGACAAATAGTTTaGTTCCCACTGCCAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: GDGISRSVFPAHLFPLWGTRQIV*FPLPEP Trigger: AGGCTCTGGCAGTGGGAAGCAAACTATTTGTCTGGT...GCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAAGCCTGGAACCTTCCCTGCTCCAATTCCCTTCCACTGTGCATGTTCCAGGCAGATCTCTGAATTaGGAGACCAATCTGGTCTAC | + |
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Preference number: 2 (lower is better) Translates to: QESLEPSLLQFPSTVHVPGRSLN*ETNLVY Trigger: GTAGACCAGATTGGTCTCCCAATTCAGAGATCTGCC...TGGAACATGCACAGTGGAAGGGAATTGGAGCAGGGAAGGTTCCAGGCTTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTATGCTTGCATGTTCTaGAGAATCACTGTGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GDGISRSVFPAHLFPLWGYACMF*RITVGF Trigger: GAAGCCCACAGTGATTCTTCAGAACATGCAAGCATA...GCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACTTTCCCCTTACCCAATaGAACCACAGGAAACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: MVFPDQCFLHICSLCGAHFPLTQ*NHRKLS Trigger: GCTCAGTTTCCTGTGGTTTCATTGGGTAAGGGGAAA...GTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR-3UTR GCA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGACCAGACAAATAGTTTaGTTCCCACTGCCAGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: RRWYFPISVSCTSVPSVGTRQIV*FPLPEP Trigger: AGGCTCTGGCAGTGGGAAGCAAACTATTTGTCTGGT...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR-3UTR GCA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGGATCTCTCTCTGCCCTaGACCTTTTTCTCCTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: RRWYFPISVSCTSVPSVGDLSLP*TFFSLA Trigger: TGCTAAGGAGAAAAAGGTGCAGGGCAGAGAGAGATC...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR-3UTR GCA 90 bp | AACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTGGAAGCAAATGGGAGTaGTTAAAGGTCTTTGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: NCRVSSLVFRPGSPCLSGGSKWE*LKVFGS Trigger: AGACCCAAAGACCTTTAAGCACTCCCATTTGCTTCC...ACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR CCA 90 bp | AACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTCCTTCAGTGTTCTGGTaGCCATCTTGTTTTTCCATG | + |
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Preference number: 2 (lower is better) Translates to: NCRVSSLVFRPGSPCLSGPSVFW*PSCFSM Trigger: CATGGAAAAACAAGATGGCCACCAGAACACTGAAGG...ACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR CCA 90 bp | TCATTCTTTACAGTAACCACACAACTGATGAAAGACAGGACCACAAGCACAGCAGTGGTGCTGGCCCCTTaGGGACAGAGTGTGCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: SFFTVTTQLMKDRTTSTAVVLAP*GQSVLH Trigger: ATGCAGCACACTCTGTCCCCAAGGGGCCAGCACCAC...TGCTGTGCTTGTGGTCCTGTCTTTCATCAGTTGTGTGGTTACTGTAAAGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR CAA 90 bp | TCACACCTGGTGGGTGTTGTGAGGTTGACTTGTACTGTTGGCATCTaGCAGATGGAGGCCAGGAATGTTCCCAAATATCCTACTGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: SHLVGVVRLTCTVGI*QMEARNVPKYPTEY Trigger: GTACTCAGTAGGATATTTGGGAACATTCCTGGCCTCCATCTGCAAGATGCCAACAGTACAAGTCAACCTCACAACACCCACCAGGTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACTATGCTTGCATGTTCTaGAGAATCACTGTGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: MVFPDQCFLHICSLCGAHYACMF*RITVGF Trigger: GAAGCCCACAGTGATTCTTCAGAACATGCAAGCATA...GTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCTCACACCTGGTGGGTGTTGTGAGGTTGACTTGTACTGTTGGCATCTTGCCCAACAAAGGAGGATaGAGTGCCAATGAGTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: FFSHLVGVVRLTCTVGILPNKGG*SANECQ Trigger: CTGGCACTCATTGGCACTTCATCCTCCTTTGTTGGG...CAAGATGCCAACAGTACAAGTCAACCTCACAACACCCACCAGGTGTGAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGTCTGAAGAATCACTGTaGGCTTCAGATTTCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: RRWYFPISVSCTSVPSVGSEESL*ASDFSS Trigger: GGAAGAGAAATCTGAAGCCCACAGTGATTCTTCAGA...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACGAAACCACAGGAAACTaGGCAAATAACCTAAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: MVFPDQCFLHICSLCGAHETTGN*ANNLSD Trigger: ATCACTTAGGTTATTTGCTCAGTTTCCTGTGGTTTC...GTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAAGAGCCGTGGCTCATAGAAGGCATTTGAGCAGAACTTTTCTGACTCACCTGCATGACCCTGTGTaGTCAAATGCAGAGCTCATG | + |
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Preference number: 2 (lower is better) Translates to: FRRAVAHRRHLSRTFLTHLHDPV*SNAELM Trigger: CATGAGCTCTGCATTTGAGCACACAGGGTCATGCAG...GTGAGTCAGAAAAGTTCTGCTCAAATGCCTTCTATGAGCCACGGCTCTTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCTCACACCTGGTGGGTGTTGTGAGGTTGACTTGTACTGTTGGCATCTTGCTGAAGATCTCTCTCTaGCCTGCACCTTTTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: FFSHLVGVVRLTCTVGILLKISL*PAPFSP Trigger: AGGAGAAAAAGGTGCAGGGCAGAGAGAGATCTTCAG...CAAGATGCCAACAGTACAAGTCAACCTCACAACACCCACCAGGTGTGAGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR CAA 90 bp | TATCTAGTTATTTTTCTCACACCTGGTGGGTGTTGTGAGGTTGACTaGTACTGTTGGCATCTTGCAGATGGAGGCCAGGAATGTTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: YLVIFLTPGGCCEVD*YCWHLADGGQECSQ Trigger: TTGGGAACATTCCTGGCCTCCATCTGCAAGATGCCAACAGTACAAGTCAACCTCACAACACCCACCAGGTGTGAGAAAAATAACTAGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| 3UTR-3UTR TCA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCATCTTCTCTCCCTTTaGAAACTCAATACACTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: RRWYFPISVSCTSVPSVGHLLSL*KLNTLY Trigger: ATACAGTGTATTGAGTTTTCAAAGGGAGAGAAGATG...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTAGAAGAGCCGTGGCTCATAGAAGGCATTTGAGCAGAACTTTTCTGACTCACTTTCCCCTTACCCAATaGAACCACAGGAAACTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: FRRAVAHRRHLSRTFLTHFPLTQ*NHRKLS Trigger: GCTCAGTTTCCTGTGGTTTCATTGGGTAAGGGGAAA...GTGAGTCAGAAAAGTTCTGCTCAAATGCCTTCTATGAGCCACGGCTCTTCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGTACAGCACACTGGAGAAAACTGAGGAAACAGTTTATTGGGCACAGGGAACATCTGAAGAATCACTGTaGGCTTCAGATTTCTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LYSTLEKTEETVYWAQGTSEESL*ASDFSS Trigger: GGAAGAGAAATCTGAAGCCCACAGTGATTCTTCAGA...TGTTCCCTGTGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR CAA 90 bp | CTGAAGCTGTCCTTTCTTGATTGGTGGCACACAGAAGAAACATATTaGTACAGCACACTGGAGAAAACTGAGGAAACAGTTTATTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LKLSFLDWWHTEETY*YSTLEKTEETVYWA Trigger: TGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTACAAATATGTTTCTTCTGTGTGCCACCAATCAAGAAAGGACAGCTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTAGAAGAGCCGTGGCTCATAGAAGGCATTTGAGCAGAACTTTTCTGACTCACGAAACCACAGGAAACTaGGCAAATAACCTAAGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: FRRAVAHRRHLSRTFLTHETTGN*ANNLSD Trigger: ATCACTTAGGTTATTTGCTCAGTTTCCTGTGGTTTC...GTGAGTCAGAAAAGTTCTGCTCAAATGCCTTCTATGAGCCACGGCTCTTCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR TCA 72 bp | TTCAGGGAGGCACTTAGAGCAGAGCTGAAAGGCCTCTaGGCCATGTGGAAGGACTGCCGTGGTGCTGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: FREALRAELKGL*AMWKDCRGAGP Trigger: GGGGCCAGCACCACGGCAGTCCTTCCACATGGCTCAGAGGCCTTTCAGCTCTGCTCTAAGTGCCTCCCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR GCA 72 bp | GGACTGCCGTGGTGCTGGCCCCTTGGGGACAGAGTGTaGTGCATGGGAACACCTGTTCACCATCAGCATACC | + |
|
Preference number: 3 (lower is better) Translates to: GLPWCWPLGDRV*CMGTPVHHQHT Trigger: GGTATGCTGATGGTGAACAGGTGTTCCCATGCAGCACACTCTGTCCCCAAGGGGCCAGCACCACGGCAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR CCA 72 bp | GAGCCATGTGGAAGGACTGCCGTGGTGCTGGCCCCTTaGGGACAGAGTGTGCTGCATGGGAACACCTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: EPCGRTAVVLAP*GQSVLHGNTCS Trigger: TGAACAGGTGTTCCCATGCAGCACACTCTGTCCCCAAGGGGCCAGCACCACGGCAGTCCTTCCACATGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR GCA 72 bp | CTGCCGTGGTGCTGGCCCCTTGGGGACAGAGTGTGCTaGATGGGAACACCTGTTCACCATCAGCATACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LPWCWPLGDRVC*MGTPVHHQHTL Trigger: AAGGGTATGCTGATGGTGAACAGGTGTTCCCATGCAGCACACTCTGTCCCCAAGGGGCCAGCACCACGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR CCA 72 bp | CGTGGTGCTGGCCCCTTGGGGACAGAGTGTGCTGCATaGGAACACCTGTTCACCATCAGCATACCCTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGAGPLGTECAA*EHLFTISIPFC Trigger: ACAGAAGGGTATGCTGATGGTGAACAGGTGTTCCCATGCAGCACACTCTGTCCCCAAGGGGCCAGCACCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR TCA 72 bp | GCACAGCTCTTTTCAGGGAGGCACTTAGAGCAGAGCTaGAAGGCCTCTGAGCCATGTGGAAGGACTGCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: AQLFSGRHLEQS*KASEPCGRTAV Trigger: CACGGCAGTCCTTCCACATGGCTCAGAGGCCTTTCAGCTCTGCTCTAAGTGCCTCCCTGAAAAGAGCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR CCA 72 bp | TCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTaGGGCTCACAGGGTGGGAAACTGCATGAAGCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRSVFPAHLFPL*GSQGGKLHEAP Trigger: TGGCGCTTCATGCAGTTTCCCACCCTGTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR-3UTR CAA 90 bp | CAACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGACGCGCCCAGATCTCTaGTACAAGGGCACACACCAT | + |
|
Preference number: 3 (lower is better) Translates to: QLSSLLSCFPAWLPLLIWTRPDL*YKGTHH Trigger: ATGGTGTGTGCCCTTGTACAAGAGATCTGGGCGCGT...CCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR TCA 72 bp | ATAGAGAAGCCTAGGGTGAGGCTAGCCTTGGATGCTTaGTCCTCCTGTGTCAGCCTCCCAAGTGCTGGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: IEKPRVRLALDA*SSCVSLPSAGD Trigger: ATCCCCAGCACTTGGGAGGCTGACACAGGAGGATCAAGCATCCAAGGCTAGCCTCACCCTAGGCTTCTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR GCA 72 bp | GAGAGGAGGAGATGGTATTTCCCGATCAGTGTTTCCTaGACATCTGTTCCCTCTGTGGGGCTCACAGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ERRRWYFPISVS*TSVPSVGLTGW Trigger: CCACCCTGTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCTCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR GCA 72 bp | CAGCAGCAGCTCTGCAATGACAGCCAGTACCTGAGCTaGAATGACAGCCAGTACCTGAAGATCTCTCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QQQLCNDSQYLS*NDSQYLKISLC Trigger: GCAGAGAGAGATCTTCAGGTACTGGCTGTCATTGCAGCTCAGGTACTGGCTGTCATTGCAGAGCTGCTGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR CCA 72 bp | GAGCAACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTaGCTCCCCTTGCTTATCTGGTTTCTGGCCAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: EQLSSLLSCFPA*LPLLIWFLARY Trigger: ATACCTGGCCAGAAACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR TCA 72 bp | TGCATGACCCTGTGTGCTCAAATGCAGAGCTCATGCTaGGATAGAGTTCTGAAGGCTAGTGGGCAAACGGGG | + |
|
Preference number: 3 (lower is better) Translates to: CMTLCAQMQSSC*DRVLKASGQTG Trigger: CCCCGTTTGCCCACTAGCCTTCAGAACTCTATCTCAGCATGAGCTCTGCATTTGAGCACACAGGGTCATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR TCA 72 bp | TACAGGATAGCCCAACAAAGGAGGATGAAGTGCCAATaGGTGCCAGAATGGCCAACAAGGCCAAAGCGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: YRIAQQRRMKCQ*VPEWPTRPKRL Trigger: CAGCCGCTTTGGCCTTGTTGGCCATTCTGGCACTCATTGGCACTTCATCCTCCTTTGTTGGGCTATCCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR GCA 72 bp | GCCTGGAACCTTCCCTGCTCCAATTCCCTTCCACTGTaGATGTTCCATGCTGTTAATGATGGCCTAGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: AWNLPCSNSLPL*MFHAVNDGLAC Trigger: ACAGGCTAGGCCATCATTAACAGCATGGAACATGCACAGTGGAAGGGAATTGGAGCAGGGAAGGTTCCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR TCA 72 bp | CAGATTTCTCTTCCCATCCACCAGTTCCAAACTGCATaGCCCTGTGTGCTCAAATGCAGAGCTCATGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QISLPIHQFQTA*PCVLKCRAHAE Trigger: CTCAGCATGAGCTCTGCATTTGAGCACACAGGGTCATGCAGTTTGGAACTGGTGGATGGGAAGAGAAATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR TCA 72 bp | GCAGATGGAGGCCAGGAATGTTCCCAAATATCCTACTaGGTACAGGATAGCCCAACAAAGGAGGATGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ADGGQECSQISY*VQDSPTKEDEV Trigger: CACTTCATCCTCCTTTGTTGGGCTATCCTGTACTCAGTAGGATATTTGGGAACATTCCTGGCCTCCATCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR CCA 72 bp | GTGCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATaGTATTTCCCGATCAGTGTTTCCTGCACATCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VLRHQSYPERRR*YFPISVSCTSV Trigger: AACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTTGTACAGCACACTGGAGAAAACTGAGGAAACAGTTTATTGGGCACAGGGACACCAGACAAATAGTTaGCTTCCCACTGCCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: YLYSTLEKTEETVYWAQGHQTNS*LPTARA Trigger: GGCTCTGGCAGTGGGAAGCAAACTATTTGTCTGGTG...TCCCTGTGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTACAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR CCA 72 bp | TCAGTGTTCTGGTGGCCATCTTGTTTTTCCATGATGTaGACAATGACACTCAGGTCTGACTTGTACCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SVFWWPSCFSMM*TMTLRSDLYPS Trigger: ACTGGGGTACAAGTCAGACCTGAGTGTCATTGTCCACATCATGGAAAAACAAGATGGCCACCAGAACACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCAAGCCATTGTCTGGCTGTCAGTGGTGAGCCTGGAAAAGATCTGAAAGTCACATCTTCTCTCCCTTaGAAAACTCAATACACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: VPSHCLAVSGEPGKDLKVTSSLP*KTQYTV Trigger: TACAGTGTATTGAGTTTTCAAAGGGAGAGAAGATGT...GACTTTCAGATCTTTTCCAGGCTCACCACTGACAGCCAGACAATGGCTTGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR-3UTR CAA 90 bp | TCATTCTTTACAGTAACCACACAACTGATGAAAGACAGGACCACAAGCACAGCATGTACTGTTGGCATCTaGCAGATGGAGGCCAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SFFTVTTQLMKDRTTSTACTVGI*QMEARN Trigger: ATTCCTGGCCTCCATCTGCAAGATGCCAACAGTACA...TGCTGTGCTTGTGGTCCTGTCTTTCATCAGTTGTGTGGTTACTGTAAAGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR TCA 72 bp | AAAGGAAAAATTGTTCAAAGACATGCATGCTCCCAGTaGCCTGCTTCTTGTAGTCAGGCCCCACCTCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: KGKIVQRHACSQ*PASCSQAPPPI Trigger: TATAGGAGGTGGGGCCTGACTACAAGAAGCAGGTCACTGGGAGCATGCATGTCTTTGAACAATTTTTCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR CCA 72 bp | TACAGCACACTGGAGAAAACTGAGGAAACAGTTTATTaGGCACAGGGAACAGTGCTAAGGCACCAGTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: YSTLEKTEETVY*AQGTVLRHQSY Trigger: ATATGACTGGTGCCTTAGCACTGTTCCCTGTGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATGGTATTTCCCGATCAGTGTACATCTTCTCTCCCTTaGAAAACTCAATACACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: AKAPVISREEEMVFPDQCTSSLP*KTQYTV Trigger: TACAGTGTATTGAGTTTTCAAAGGGAGAGAAGATGT...ACACTGATCGGGAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGCTTAAGGTGACAGTACAGCATTGGATGCTCAAGTTAACAGATCCTATACACCAGACAAATAGTTaGCTTCCCACTGCCAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LKLKVTVQHWMLKLTDPIHQTNS*LPTARA Trigger: GGCTCTGGCAGTGGGAAGCAAACTATTTGTCTGGTG...TATAGGATCTGTTAACTTGAGCATCCAATGCTGTACTGTCACCTTAAGCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR TCA 72 bp | CTATCTTCAGCAGTGGACACACAAGTCTTCCCCTACTaGACACTAACAGACATGATTTTAATACTAGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: LSSAVDTQVFPY*TLTDMILILGP Trigger: GGGTCCTAGTATTAAAATCATGTCTGTTAGTGTTCAGTAGGGGAAGACTTGTGTGTCCACTGCTGAAGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR CCA 72 bp | CACAAGATGACTCTGAAGCTGTCCTTTCTTGATTGGTaGCACACAGAAGAAACATATTTGTACAGCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: HKMTLKLSFLDW*HTEETYLYSTL Trigger: CAGTGTGCTGTACAAATATGTTTCTTCTGTGTGCCACCAATCAAGAAAGGACAGCTTCAGAGTCATCTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR CCA 72 bp | AGGCACAAGATGACTCTGAAGCTGTCCTTTCTTGATTaGTGGCACACAGAAGAAACATATTTGTACAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: RHKMTLKLSFLD*WHTEETYLYST Trigger: TGTGCTGTACAAATATGTTTCTTCTGTGTGCCACCAATCAAGAAAGGACAGCTTCAGAGTCATCTTGTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTTGTACAGCACACTGGAGAAAACTGAGGAAACAGTTTATTGGGCACAGGGAGCTCATAGAAGGCATTaGAGCAGAACTTTTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: YLYSTLEKTEETVYWAQGAHRRH*SRTFLT Trigger: AGTCAGAAAAGTTCTGCTCAAATGCCTTCTATGAGC...TCCCTGTGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTACAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR TCA 72 bp | AGGCATTTGAGCAGAACTTTTCTGACTCACAGTCCATaGAGCGGGAAGCTAGCTGATTTTACATTCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RHLSRTFLTHSP*SGKLADFTFFE Trigger: TTCAAAGAATGTAAAATCAGCTAGCTTCCCGCTTCATGGACTGTGAGTCAGAAAAGTTCTGCTCAAATGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR CCA 72 bp | ATACAGCAGAGGCAATTAAAGGAACACCCAGATATGTaGACAAGAGTTGACACACTACTGGAATTTTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: IQQRQLKEHPDM*TRVDTLLEFSL Trigger: CAGTGAAAATTCCAGTAGTGTGTCAACTCTTGTCCACATATCTGGGTGTTCCTTTAATTGCCTCTGCTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | GCCATGTGGAAGGACTGCCGTGGTGCTGGCCCCTTGGGGACAGAGTGTGCTGCAGCAACATTGGTGAAGTaGCTGGGCCAACTTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AMWKDCRGAGPLGTECAAATLVK*LGQLSH Trigger: GTGGGAAAGTTGGCCCAGGCACTTCACCAATGTTGC...TGCAGCACACTCTGTCCCCAAGGGGCCAGCACCACGGCAGTCCTTCCACATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | GCCATGTGGAAGGACTGCCGTGGTGCTGGCCCCTTGGGGACAGAGTGTGCTGCATCCAAACTGTTTGGGTaGCTGGCCATGACAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AMWKDCRGAGPLGTECAASKLFG*LAMTAV Trigger: AACAGCTGTCATGGCCAGCCACCCAAACAGTTTGGA...TGCAGCACACTCTGTCCCCAAGGGGCCAGCACCACGGCAGTCCTTCCACATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | CAACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGGTCCTGTGGGTACTCTaGGGAGGAAGAAAACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLSSLLSCFPAWLPLLIWVLWVL*GGRKPG Trigger: TCCTGGTTTTCTTCCTCCCCAGAGTACCCACAGGAC...CCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR CAA 72 bp | AACCTGTGCTTGGGAGCAACTGTCGAGTCTCCTCTCTaGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NLCLGATVESPL*FSGLAPLAYLV Trigger: AACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTTGCTCCCAAGCACAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | GTGCCAAGCCATTGTCTGGCTGTCAGTGGTGAGCCTGGAAAAGATCTGAAAGTCAGCCCCTGGGAACTGTaGAGCGATCCAGGTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSHCLAVSGEPGKDLKVSPWEL*SDPGCS Trigger: AGAACAACCTGGATCGCTGCACAGTTCCCAGGGGCT...GACTTTCAGATCTTTTCCAGGCTCACCACTGACAGCCAGACAATGGCTTGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | TGCAATGACAGCCAGTACCTGAAGATCTCTCTCTGCCCTGCACCTTTTTCTCCTCCAACTTTCCCACTGTaGCCCCTTTGGTGCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CNDSQYLKISLCPAPFSPPTFPL*PLWCLP Trigger: GGGAAGGCACCAAAGGGGCCACAGTGGGAAAGTTGG...AGGAGAAAAAGGTGCAGGGCAGAGAGAGATCTTCAGGTACTGGCTGTCATTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | ATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACCCGTGGGCTTTGCATTaGTGTCATTCAGGTGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MVFPDQCFLHICSLCGAHPWALH*CHSGVR Trigger: CCGAACACCTGAATGACATCAATGCAAAGCCCACGG...GTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCCGTGGGCTTTGCATTaGTGTCATTCAGGTGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RRWYFPISVSCTSVPSVGPWALH*CHSGVR Trigger: CCGAACACCTGAATGACATCAATGCAAAGCCCACGG...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | GGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACAGCTGTGTCTCAGTCTGTaGATCATCTTCCCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GISRSVFPAHLFPLWGSQLCLSL*IIFPSS Trigger: GGAAGAGGGGAAGATGATGCACAGACTGAGACACAG...CTGTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | GCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATGGTATTTCCCGATCAGTGTAGCCCCTGGGAACTGTaGAGCGATCCAGGTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKAPVISREEEMVFPDQCSPWEL*SDPGCS Trigger: AGAACAACCTGGATCGCTGCACAGTTCCCAGGGGCT...ACACTGATCGGGAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | ATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACGCAACATTGGTGAAGTaGCTGGGCCAACTTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MVFPDQCFLHICSLCGAHATLVK*LGQLSH Trigger: GTGGGAAAGTTGGCCCAGGCACTTCACCAATGTTGC...GTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | CAACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGAGCACATGCCTTCTATaGCCTCCACGATTATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLSSLLSCFPAWLPLLIWSTCLL*PPRLSF Trigger: GAAGGATAATCGTGGAGGCCATAGAAGGCATGTGCT...CCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGGTCCTGTGGGTACTCTaGGGAGGAAGAAAACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRWYFPISVSCTSVPSVGVLWVL*GGRKPG Trigger: TCCTGGTTTTCTTCCTCCCCAGAGTACCCACAGGAC...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGATCCTGCAACATTGGTaGAGTGCCTGGGCCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRWYFPISVSCTSVPSVGILQHW*SAWANF Trigger: AAAGTTGGCCCAGGCACTTCACCAATGTTGCAGGAT...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGAACAGTGCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATGGTATTTCGCACGTGCATCAGGTTaGCCTTCTCCATGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGTVLRHQSYPERRRWYFARASG*PSPCTP Trigger: TGGAGTACATGGAGAAGGGCAACCTGATGCACGTGC...GAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGCACTGTTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | TGCAATGACAGCCAGTACCTGAAGATCTCTCTCTGCCCTGCACCTTTTTCTCCTTGGGTCTTTAGCACGTaGATCAGGTTGCCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CNDSQYLKISLCPAPFSPWVFST*IRLPFS Trigger: GGAGAAGGGCAACCTGATGCACGTGCTAAAGACCCA...AGGAGAAAAAGGTGCAGGGCAGAGAGAGATCTTCAGGTACTGGCTGTCATTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | GGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACAGCTTCTCCGTGGGCTTTaGATTGATGTCATTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GISRSVFPAHLFPLWGSQLLRGL*IDVIQV Trigger: CACCTGAATGACATCAATGCAAAGCCCACGGAGAAG...CTGTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | GGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCCTTCTCCGTGGGCTTTaGATTGATGTCATTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GDGISRSVFPAHLFPLWGLLRGL*IDVIQV Trigger: CACCTGAATGACATCAATGCAAAGCCCACGGAGAAG...GCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | GCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATGGTATTTCCCGATCAGTGTATGGCATGGTGGGTGTaGTTCCCGGTATGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKAPVISREEEMVFPDQCMAWWV*FPVCWS Trigger: AGACCAACATACCGGGAAGCACACCCACCATGCCAT...ACACTGATCGGGAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | GGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACAGAGCACATGCCTTCTATaGCCTCCACGATTATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GISRSVFPAHLFPLWGSQSTCLL*PPRLSF Trigger: GAAGGATAATCGTGGAGGCCATAGAAGGCATGTGCT...CTGTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | AACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTAATGCCAAGAAATGTTaGCCTGTCTTCTGGGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: NCRVSSLVFRPGSPCLSGNAKKC*PVFWDR Trigger: GCGATCCCAGAAGACAGGCCAACATTTCTTGGCATT...ACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCACCTTCCCCCAACATCTTCTCTCCCTTTGAAAACTCAATACACTGTATTCCCATCTGGAGCCCCTaGGAACTGTGCAGCGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPPSPNIFSPFENSIHCIPIWSP*ELCSDP Trigger: TGGATCGCTGCACAGTTCCCAGGGGCTCCAGATGGG...AATACAGTGTATTGAGTTTTCAAAGGGAGAGAAGATGTTGGGGGAAGGTGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR CAA 72 bp | GTCAATGACTGGCTTTGTGTCACGCGCCCAGATCTCTaGTACAAGGGCACACACCATGAGAGTAAACGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNDWLCVTRPDL*YKGTHHESKRL Trigger: AAGCCGTTTACTCTCATGGTGTGTGCCCTTGTACAAGAGATCTGGGCGCGTGACACAAAGCCAGTCATTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | ATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACACTGCTCAGTACAGATaGCATTCTCATAGGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MVFPDQCFLHICSLCGAHTAQYR*HSHRAP Trigger: AGGAGCCCTATGAGAATGTCATCTGTACTGAGCAGT...GTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | TGCAATGACAGCCAGTACCTGAAGATCTCTCTCTGCCCTGCACCTTTTTCTCCTTTGCCCAAAGGACAATaGCAAAGCTGTACACGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CNDSQYLKISLCPAPFSPLPKGQ*QSCTRP Trigger: CGGACGTGTACAGCTTTGGCATTGTCCTTTGGGCAA...AGGAGAAAAAGGTGCAGGGCAGAGAGAGATCTTCAGGTACTGGCTGTCATTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | GCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATGGTATTTCCCGATCAGTGTTTGCCCAAAGGACAATaGCAAAGCTGTACACGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AKAPVISREEEMVFPDQCLPKGQ*QSCTRP Trigger: CGGACGTGTACAGCTTTGGCATTGTCCTTTGGGCAA...ACACTGATCGGGAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | TATTTGTACAGCACACTGGAGAAAACTGAGGAAACAGTTTATTGGGCACAGGGACCCATCTGGAGCCCCTaGGAACTGTGCAGCGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLYSTLEKTEETVYWAQGPIWSP*ELCSDP Trigger: TGGATCGCTGCACAGTTCCCAGGGGCTCCAGATGGG...TCCCTGTGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTACAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | GTGCCAAGCCATTGTCTGGCTGTCAGTGGTGAGCCTGGAAAAGATCTGAAAGTCAGCCTCATTCTGCCTTaGCTGCGGTTTTGTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPSHCLAVSGEPGKDLKVSLILP*LRFCLF Trigger: AAACAGACAAAACCGCAGCCAAGGCAGAATGAGGCT...GACTTTCAGATCTTTTCCAGGCTCACCACTGACAGCCAGACAATGGCTTGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | GCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATGGTATTTCCCGATCAGTGTTCCAAACTGTTTGGGTaGCTGGCCATGACAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AKAPVISREEEMVFPDQCSKLFG*LAMTAV Trigger: AACAGCTGTCATGGCCAGCCACCCAAACAGTTTGGA...ACACTGATCGGGAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | GCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATGGTATTTCCCGATCAGTGTGAGGTCATCTGCTACTaGCCCAGAGAAGTATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKAPVISREEEMVFPDQCEVICY*PREVWH Trigger: ATGCCATACTTCTCTGGGCCAGTAGCAGATGACCTC...ACACTGATCGGGAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCACCTTCCCCCAACATCTTCTCTCCCTTTGAAAACTCAATACACTGTATTCCAACTTTCCCACTGTaGCCCCTTTGGTGCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPPSPNIFSPFENSIHCIPTFPL*PLWCLP Trigger: GGGAAGGCACCAAAGGGGCCACAGTGGGAAAGTTGG...AATACAGTGTATTGAGTTTTCAAAGGGAGAGAAGATGTTGGGGGAAGGTGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | GCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATGGTATTTCCCGATCAGTGTAATGCCAAGAAATGTTaGCCTGTCTTCTGGGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: AKAPVISREEEMVFPDQCNAKKC*PVFWDR Trigger: GCGATCCCAGAAGACAGGCCAACATTTCTTGGCATT...ACACTGATCGGGAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | ATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACTGGTGTTATCAAAGATaGCTTGGTGTCTGGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: MVFPDQCFLHICSLCGAHWCYQR*LGVWKS Trigger: CGACTTCCAGACACCAAGCCATCTTTGATAACACCA...GTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGTGGTGTTATCAAAGATaGCTTGGTGTCTGGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RRWYFPISVSCTSVPSVGWCYQR*LGVWKS Trigger: CGACTTCCAGACACCAAGCCATCTTTGATAACACCA...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| 3UTR CAA 72 bp | GTGGGTGTTGTGAGGTTGACTTGTACTGTTGGCATCTaGCAGATGGAGGCCAGGAATGTTCCCAAATATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGVVRLTCTVGI*QMEARNVPKYP Trigger: AGGATATTTGGGAACATTCCTGGCCTCCATCTGCAAGATGCCAACAGTACAAGTCAACCTCACAACACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| 3UTR CAA 72 bp | ATTTTTCTCACACCTGGTGGGTGTTGTGAGGTTGACTaGTACTGTTGGCATCTTGCAGATGGAGGCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IFLTPGGCCEVD*YCWHLADGGQE Trigger: TTCCTGGCCTCCATCTGCAAGATGCCAACAGTACAAGTCAACCTCACAACACCCACCAGGTGTGAGAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | GGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACAGTATCCTTCCTTTCAATaGAAGTGGGACATCTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GISRSVFPAHLFPLWGSQYPSFQ*KWDIYL Trigger: CAGATAGATGTCCCACTTTCATTGAAAGGAAGGATA...CTGTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | AACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTTATCCTTCCTTTCAATaGAAGTGGGACATCTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NCRVSSLVFRPGSPCLSGYPSFQ*KWDIYL Trigger: CAGATAGATGTCCCACTTTCATTGAAAGGAAGGATA...ACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGAAGGGTACACAGTCATaGTGCAGTGAAAACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRWYFPISVSCTSVPSVGKGTQS*CSENIL Trigger: GAGAATGTTTTCACTGCAGCATGACTGTGTACCCTT...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | GCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATGGTATTTCCCGATCAGTGTTCATTCTGCCTTGGCTaGGGTTTTGTCTGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKAPVISREEEMVFPDQCSFCLG*GFVCFS Trigger: AGAGAAACAGACAAAACCGCAGCCAAGGCAGAATGA...ACACTGATCGGGAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | TTTAGAAGAGCCGTGGCTCATAGAAGGCATTTGAGCAGAACTTTTCTGACTCACACGAGCTCTCTGCTGTaGAAAGGGGTCATGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FRRAVAHRRHLSRTFLTHTSSLL*KGVMRD Trigger: GTCTCTCATGACCCCTTTGCACAGCAGAGAGCTCGT...GTGAGTCAGAAAAGTTCTGCTCAAATGCCTTCTATGAGCCACGGCTCTTCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | TTGTACAGCACACTGGAGAAAACTGAGGAAACAGTTTATTGGGCACAGGGAACAACGAGCTCTCTGCTGTaGAAAGGGGTCATGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LYSTLEKTEETVYWAQGTTSSLL*KGVMRD Trigger: GTCTCTCATGACCCCTTTGCACAGCAGAGAGCTCGT...TGTTCCCTGTGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGATTGTTTGGTGGTTGTaGATTCAGTCCAACATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRWYFPISVSCTSVPSVGIVWWL*IQSNIH Trigger: ATGGATGTTGGACTGAATTCACAACCACCAAACAAT...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | TTTAGAAGAGCCGTGGCTCATAGAAGGCATTTGAGCAGAACTTTTCTGACTCACTCGATTTCATCGATCTaGGACTCAGTGAAGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRRAVAHRRHLSRTFLTHSISSI*DSVKPS Trigger: GCTGGGCTTCACTGAGTCTCAGATCGATGAAATCGA...GTGAGTCAGAAAAGTTCTGCTCAAATGCCTTCTATGAGCCACGGCTCTTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | TATTTGTACAGCACACTGGAGAAAACTGAGGAAACAGTTTATTGGGCACAGGGACTGTGTCTCAGTCTGTaGATCATCTTCCCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YLYSTLEKTEETVYWAQGLCLSL*IIFPSS Trigger: GGAAGAGGGGAAGATGATGCACAGACTGAGACACAG...TCCCTGTGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTACAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | TTTAGAAGAGCCGTGGCTCATAGAAGGCATTTGAGCAGAACTTTTCTGACTCACCATTCTCTGCAGCACTaGGCTTTGATCTGGATACTC | + |
|
Preference number: 4 (lower is better) Translates to: FRRAVAHRRHLSRTFLTHHSLQH*ALIWIL Trigger: GAGTATCCAGATCAAAGCCCAGTGCTGCAGAGAATG...GTGAGTCAGAAAAGTTCTGCTCAAATGCCTTCTATGAGCCACGGCTCTTCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCACCTTCCCCCAACATCTTCTCTCCCTTTGAAAACTCAATACACTGTATTAGCCTCATTCTGCCTTaGCTGCGGTTTTGTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPPSPNIFSPFENSIHCISLILP*LRFCLF Trigger: AAACAGACAAAACCGCAGCCAAGGCAGAATGAGGCT...AATACAGTGTATTGAGTTTTCAAAGGGAGAGAAGATGTTGGGGGAAGGTGGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | ATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACGTTGGTCTCTGGCACTaGAGTTTTATAAGTACTATA | + |
|
Preference number: 4 (lower is better) Translates to: MVFPDQCFLHICSLCGAHVGLWH*SFISTI Trigger: TATAGTACTTATAAAACTCCAGTGCCAGAGACCAAC...GTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | TCATTCTTTACAGTAACCACACAACTGATGAAAGACAGGACCACAAGCACAGCAGAGGTCATCTGCTACTaGCCCAGAGAAGTATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFFTVTTQLMKDRTTSTAEVICY*PREVWH Trigger: ATGCCATACTTCTCTGGGCCAGTAGCAGATGACCTC...TGCTGTGCTTGTGGTCCTGTCTTTCATCAGTTGTGTGGTTACTGTAAAGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | TGCAATGACAGCCAGTACCTGAAGATCTCTCTCTGCCCTGCACCTTTTTCTCCTGTTCCAAATCCATGCTaGTTATACAATCCATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CNDSQYLKISLCPAPFSPVPNPC*LYNPLF Trigger: GAACAATGGATTGTATAATCAGCATGGATTTGGAAC...AGGAGAAAAAGGTGCAGGGCAGAGAGAGATCTTCAGGTACTGGCTGTCATTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCACCTTCCCCCAACATCTTCTCTCCCTTTGAAAACTCAATACACTGTATTTCATTCTGCCTTGGCTaGGGTTTTGTCTGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPPSPNIFSPFENSIHCISFCLG*GFVCFS Trigger: AGAGAAACAGACAAAACCGCAGCCAAGGCAGAATGA...AATACAGTGTATTGAGTTTTCAAAGGGAGAGAAGATGTTGGGGGAAGGTGGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGCACCTTTTTCTCCTTAGCACTCCTTAAAAATCTCTCACTAATTGATAATGCACGTGCATCAGGTTaGCCTTCTCCATGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCTFFSLALLKNLSLIDNARASG*PSPCTP Trigger: TGGAGTACATGGAGAAGGGCAACCTGATGCACGTGC...ATTATCAATTAGTGAGAGATTTTTAAGGAGTGCTAAGGAGAAAAAGGTGCAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGCACCTTTTTCTCCTTAGCACTCCTTAAAAATCTCTCACTAATTGATAATATGGCATGGTGGGTGTaGTTCCCGGTATGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCTFFSLALLKNLSLIDNMAWWV*FPVCWS Trigger: AGACCAACATACCGGGAAGCACACCCACCATGCCAT...ATTATCAATTAGTGAGAGATTTTTAAGGAGTGCTAAGGAGAAAAAGGTGCAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | TTAAAGCTTAAGGTGACAGTACAGCATTGGATGCTCAAGTTAACAGATCCTATATCGATTTCATCGATCTaGGACTCAGTGAAGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKLKVTVQHWMLKLTDPISISSI*DSVKPS Trigger: GCTGGGCTTCACTGAGTCTCAGATCGATGAAATCGA...TATAGGATCTGTTAACTTGAGCATCCAATGCTGTACTGTCACCTTAAGCTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | CCCTGCACCTTTTTCTCCTTAGCACTCCTTAAAAATCTCTCACTAATTGATAATATCCTGCAACATTGGTaGAGTGCCTGGGCCAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PCTFFSLALLKNLSLIDNILQHW*SAWANF Trigger: AAAGTTGGCCCAGGCACTTCACCAATGTTGCAGGAT...ATTATCAATTAGTGAGAGATTTTTAAGGAGTGCTAAGGAGAAAAAGGTGCAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | AGGCCACCTTCCCCCAACATCTTCTCTCCCTTTGAAAACTCAATACACTGTATTGTTCCAAATCCATGCTaGTTATACAATCCATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPPSPNIFSPFENSIHCIVPNPC*LYNPLF Trigger: GAACAATGGATTGTATAATCAGCATGGATTTGGAAC...AATACAGTGTATTGAGTTTTCAAAGGGAGAGAAGATGTTGGGGGAAGGTGGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CCA 90 bp | TTGTACAGCACACTGGAGAAAACTGAGGAAACAGTTTATTGGGCACAGGGAACAGTTGGTCTCTGGCACTaGAGTTTTATAAGTACTATA | + |
|
Preference number: 4 (lower is better) Translates to: LYSTLEKTEETVYWAQGTVGLWH*SFISTI Trigger: TATAGTACTTATAAAACTCCAGTGCCAGAGACCAAC...TGTTCCCTGTGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGCACCTTTTTCTCCTTAGCACTCCTTAAAAATCTCTCACTAATTGATAATAAGGGTACACAGTCATaGTGCAGTGAAAACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCTFFSLALLKNLSLIDNKGTQS*CSENIL Trigger: GAGAATGTTTTCACTGCAGCATGACTGTGTACCCTT...ATTATCAATTAGTGAGAGATTTTTAAGGAGTGCTAAGGAGAAAAAGGTGCAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR TCA 90 bp | TTAAAGCTTAAGGTGACAGTACAGCATTGGATGCTCAAGTTAACAGATCCTATAATTGTTTGGTGGTTGTaGATTCAGTCCAACATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKLKVTVQHWMLKLTDPIIVWWL*IQSNIH Trigger: ATGGATGTTGGACTGAATTCACAACCACCAAACAAT...TATAGGATCTGTTAACTTGAGCATCCAATGCTGTACTGTCACCTTAAGCTTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | GCCATGTGGAAGGACTGCCGTGGTGCTGGCCCCTTGGGGACAGAGTGTGCTGCATCCAAGAGAACCTCATaGTACTCAGCGCGGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AMWKDCRGAGPLGTECAASKRTS*YSARLG Trigger: GCCCAACCGCGCTGAGTACAATGAGGTTCTCTTGGA...TGCAGCACACTCTGTCCCCAAGGGGCCAGCACCACGGCAGTCCTTCCACATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS GCA 90 bp | AACCAGGACTCCTCCACAGGACCCATCTGGAGCCCCTGGGAACTGTaGAGCGATCCAGGTTGTTCTGAATTTGACCTGCTCGGAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: NQDSSTGPIWSPWEL*SDPGCSEFDLLGGK Trigger: CTTACCTCCGAGCAGGTCAAATTCAGAACAACCTGGATCGCTGCACAGTTCCCAGGGGCTCCAGATGGGTCCTGTGGAGGAGTCCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CCA 90 bp | CAGCTTAGCCTGCACACTGCGATCATTCTCGTCCTGTGGGTACTCTaGGGAGGAAGAAAACCAGGACTCCTCCACAGGACCCATCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLSLHTAIILVLWVL*GGRKPGLLHRTHLE Trigger: CTCCAGATGGGTCCTGTGGAGGAGTCCTGGTTTTCTTCCTCCCCAGAGTACCCACAGGACGAGAATGATCGCAGTGTGCAGGCTAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS TCA 90 bp | CTGGCACGAATCAAGTGGTTCAGCAGGTCTATCCTGCAACATTGGTaGAGTGCCTGGGCCAACTTTCCCACTGTGGCCCCTTTGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LARIKWFSRSILQHW*SAWANFPTVAPLVP Trigger: AGGCACCAAAGGGGCCACAGTGGGAAAGTTGGCCCAGGCACTTCACCAATGTTGCAGGATAGACCTGCTGAACCACTTGATTCGTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS GCA 90 bp | ACGAATCAAGTGGTTCAGCAGGTCTATCCTGCAACATTGGTGAAGTaGCTGGGCCAACTTTCCCACTGTGGCCCCTTTGGTGCCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TNQVVQQVYPATLVK*LGQLSHCGPFGAFP Trigger: CGGGAAGGCACCAAAGGGGCCACAGTGGGAAAGTTGGCCCAGGCACTTCACCAATGTTGCAGGATAGACCTGCTGAACCACTTGATTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CCA 90 bp | GAGGAAGAAAACCAGGACTCCTCCACAGGACCCATCTGGAGCCCCTaGGAACTGTGCAGCGATCCAGGTTGTTCTGAATTTGACCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EEENQDSSTGPIWSP*ELCSDPGCSEFDLL Trigger: GAGCAGGTCAAATTCAGAACAACCTGGATCGCTGCACAGTTCCCAGGGGCTCCAGATGGGTCCTGTGGAGGAGTCCTGGTTTTCTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CCA 90 bp | TTCCTCTTGCAGCTTAGCCTGCACACTGCGATCATTCTCGTCCTGTaGGTACTCTGGGGAGGAAGAAAACCAGGACTCCTCCACAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: FLLQLSLHTAIILVL*VLWGGRKPGLLHRT Trigger: GGTCCTGTGGAGGAGTCCTGGTTTTCTTCCTCCCCAGAGTACCCACAGGACGAGAATGATCGCAGTGTGCAGGCTAAGCTGCAAGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS-3UTR CAA 90 bp | CAACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTCAGTGAAGCCCAGCTaGCGGGCACAGTTTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QLSSLLSCFPAWLPLLIWSVKPS*RAQFFH Trigger: GTGGAAAAACTGTGCCCGCAAGCTGGGCTTCACTGA...CCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS CCA 90 bp | TGGGATCGCCTGCCAGCACCGCTCCATGAGGCTGATGATCTCCCTTaGACAGTACTCAAGGATTTCCTCTACATTTGGCCTGTTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WDRLPAPLHEADDLP*TVLKDFLYIWPVPR Trigger: TCTGGGAACAGGCCAAATGTAGAGGAAATCCTTGAGTACTGTCCAAGGGAGATCATCAGCCTCATGGAGCGGTGCTGGCAGGCGATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CCA 90 bp | CTATCCTGCAACATTGGTGAAGTGCCTGGGCCAACTTTCCCACTGTaGCCCCTTTGGTGCCTTCCCGCATCAGCCACTTCTGAAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: LSCNIGEVPGPTFPL*PLWCLPASATSEAF Trigger: AAATGCTTCAGAAGTGGCTGATGCGGGAAGGCACCAAAGGGGCCACAGTGGGAAAGTTGGCCCAGGCACTTCACCAATGTTGCAGGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACAGCACGTGCATCAGGTaGCCCTTCTCCATGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: MVFPDQCFLHICSLCGAHSTCIR*PFSMYS Trigger: GGAGTACATGGAGAAGGGCAACCTGATGCACGTGCT...GTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| CDS GCA 90 bp | GCCCCTGGGAACTGTGCAGCGATCCAGGTTGTTCTGAATTTGACCTaGTCGGAGGTAAGGGTACACAGTCATGCTGCAGTGAAAACATTC | + |
|
Preference number: 5 (lower is better) Translates to: APGNCAAIQVVLNLT*SEVRVHSHAAVKTF Trigger: GAATGTTTTCACTGCAGCATGACTGTGTACCCTTACCTCCGAGCAGGTCAAATTCAGAACAACCTGGATCGCTGCACAGTTCCCAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CCA 90 bp | AGGCCTAAATTCTTCTTCAATGCCAAGAAATGTTGGCCTGTCTTCTaGGATCGCCTGCCAGCACCGCTCCATGAGGCTGATGATCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPKFFFNAKKCWPVF*DRLPAPLHEADDLP Trigger: AGGGAGATCATCAGCCTCATGGAGCGGTGCTGGCAGGCGATCCCAGAAGACAGGCCAACATTTCTTGGCATTGAAGAAGAATTTAGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CCA 90 bp | AACATTGGTGAAGTGCCTGGGCCAACTTTCCCACTGTGGCCCCTTTaGTGCCTTCCCGCATCAGCCACTTCTGAAGCATTTGGTAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: NIGEVPGPTFPLWPL*CLPASATSEAFGKL Trigger: AAGTTTACCAAATGCTTCAGAAGTGGCTGATGCGGGAAGGCACCAAAGGGGCCACAGTGGGAAAGTTGGCCCAGGCACTTCACCAATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS TCA 90 bp | CAATGCCAAAGCTGTACACGTCCGACTTCTCCGTGGGCTTTGCATTaGTGTCATTCAGGTGTTCGGGTGCCATGTAGTAAAGGGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QCQSCTRPTSPWALH*CHSGVRVPCSKGYH Trigger: GTGGTACCCTTTACTACATGGCACCCGAACACCTGAATGACATCAATGCAAAGCCCACGGAGAAGTCGGACGTGTACAGCTTTGGCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS GCA 90 bp | CCACACCAAGATCGGCTATCTGGGTCTTTAGCACGTGCATCAGGTTaGCCTTCTCCATGTACTCCATCACCAGCGAATAGTTCCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PHQDRLSGSLARASG*PSPCTPSPANSSLL Trigger: AAGAAGGGAACTATTCGCTGGTGATGGAGTACATGGAGAAGGGCAACCTGATGCACGTGCTAAAGACCCAGATAGCCGATCTTGGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171137.2 |
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| CDS-3UTR CAA 90 bp | GGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACAGTCAGGCTTCAGGTCCTaGTGTATCACACCTTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GISRSVFPAHLFPLWGSQSGFRS*CITPLS Trigger: TGACAAAGGTGTGATACACAAGGACCTGAAGCCTGA...CTGTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| CDS-3UTR CAA 90 bp | GGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACAGCTGCAGCACTGGGCTTaGATCTGGATACTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GISRSVFPAHLFPLWGSQLQHWA*IWILFL Trigger: AAGAAAGAGTATCCAGATCAAAGCCCAGTGCTGCAG...CTGTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| CDS-3UTR CAA 90 bp | GGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTCACAGGCCTTGGCTGCGGTTTaGTCTGTTTCTCTGCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: GISRSVFPAHLFPLWGSQALAAV*SVSLQI Trigger: TATTTGCAGAGAAACAGACAAAACCGCAGCCAAGGC...CTGTGAGCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| CDS TCA 90 bp | CATCTCTTTCATAGTCATGGTCGATTTCATCGATCTGAGACTCAGTaGAGCCCAGCTTGCGGGCACAGTTTTTCCACTGCCTTCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HLFHSHGRFHRSETQ*SPACGHSFSTAFPG Trigger: ACCTGGGAAGGCAGTGGAAAAACTGTGCCCGCAAGCTGGGCTTCACTGAGTCTCAGATCGATGAAATCGACCATGACTATGAAAGAGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS GCA 90 bp | ATGATGATGCCCAGTAGCTTCACCACTCGACTGTGTCTCAGTCTGTaGATCATCTTCCCCTCTTCCAAGAGAACCTCATTGTACTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: MMMPSSFTTRLCLSL*IIFPSSKRTSLYSA Trigger: CGCTGAGTACAATGAGGTTCTCTTGGAAGAGGGGAAGATGATGCACAGACTGAGACACAGTCGAGTGGTGAAGCTACTGGGCATCATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS GCA 90 bp | AAGGACAATGCCAAAGCTGTACACGTCCGACTTCTCCGTGGGCTTTaGATTGATGTCATTCAGGTGTTCGGGTGCCATGTAGTAAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KDNAKAVHVRLLRGL*IDVIQVFGCHVVKG Trigger: ACCCTTTACTACATGGCACCCGAACACCTGAATGACATCAATGCAAAGCCCACGGAGAAGTCGGACGTGTACAGCTTTGGCATTGTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS GCA 90 bp | ACCTCTTGCTCCTGCACTCTTAATATTCTCACGAGCTCTCTGCTGTaGAAAGGGGTCATGAGAGACCCTTCGTTTCCTTTCCTCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSCSCTLNILTSSLL*KGVMRDPSFPFLLS Trigger: AGAGAGGAGGAAAGGAAACGAAGGGTCTCTCATGACCCCTTTGCACAGCAGAGAGCTCGTGAGAATATTAAGAGTGCAGGAGCAAGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS GCA 90 bp | AATTCCACGACTCGTTGTGCTGGGATCAGAATGACCTCTTGCTCCTaGACTCTTAATATTCTCACGAGCTCTCTGCTGTGCAAAGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NSTTRCAGIRMTSCS*TLNILTSSLLCKGV Trigger: GACCCCTTTGCACAGCAGAGAGCTCGTGAGAATATTAAGAGTGCAGGAGCAAGAGGTCATTCTGATCCCAGCACAACGAGTCGTGGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS-3UTR CAA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTGCAGCACTGGGCTTaGATCTGGATACTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRWYFPISVSCTSVPSVGLQHWA*IWILFL Trigger: AAGAAAGAGTATCCAGATCAAAGCCCAGTGCTGCAG...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| CDS-3UTR CAA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGGCCTTGGCTGCGGTTTaGTCTGTTTCTCTGCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: RRWYFPISVSCTSVPSVGALAAV*SVSLQI Trigger: TATTTGCAGAGAAACAGACAAAACCGCAGCCAAGGC...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| CDS-3UTR CAA 90 bp | GGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCACATTTGGCTTAGATTaGGCGGATACCAAACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GDGISRSVFPAHLFPLWGTFGLD*ADTKLL Trigger: CAGGAGTTTGGTATCCGCCAAATCTAAGCCAAATGT...GCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| CDS-3UTR CAA 90 bp | CAGGAAAGCCTGGAACCTTCCCTGCTCCAATTCCCTTCCACTGTGCATGTTCCAACATTTGGCTTAGATTaGGCGGATACCAAACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QESLEPSLLQFPSTVHVPTFGLD*ADTKLL Trigger: CAGGAGTTTGGTATCCGCCAAATCTAAGCCAAATGT...TGGAACATGCACAGTGGAAGGGAATTGGAGCAGGGAAGGTTCCAGGCTTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
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| CDS GCA 90 bp | CGACTTCTCCGTGGGCTTTGCATTGATGTCATTCAGGTGTTCGGGTaGCATGTAGTAAAGGGTACCACCATTGTTCTTCTTAGTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLLRGLCIDVIQVFG*HVVKGTTIVLLSGA Trigger: AGCACCACTAAGAAGAACAATGGTGGTACCCTTTACTACATGGCACCCGAACACCTGAATGACATCAATGCAAAGCCCACGGAGAAGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS GCA 90 bp | CACTGCAATTCCACGACTCGTTGTGCTGGGATCAGAATGACCTCTTaGTCCTGCACTCTTAATATTCTCACGAGCTCTCTGCTGTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HCNSTTRCAGIRMTS*SCTLNILTSSLLCK Trigger: TTTGCACAGCAGAGAGCTCGTGAGAATATTAAGAGTGCAGGAGCAAGAGGTCATTCTGATCCCAGCACAACGAGTCGTGGAATTGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CCA 90 bp | GCCTCCACGATTATCCTTCCTTTCAATGAAAGTGGGACATCTATCTaGGTCTTTAGCACGTGCATCAGGTTGCCCTTCTCCATGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASTIILPFNESGTSI*VFSTCIRLPFSMYS Trigger: GGAGTACATGGAGAAGGGCAACCTGATGCACGTGCTAAAGACCCAGATAGATGTCCCACTTTCATTGAAAGGAAGGATAATCGTGGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| CDS CCA 90 bp | TATAGTATATTTTATGAGGTCATCTGCTACTGGCCCAGAGAAGTATaGCATGGTGGGTGTGCTTCCCGGTATGTTGGTCTCTGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: YSIFYEVICYWPREV*HGGCASRYVGLWHW Trigger: CCAGTGCCAGAGACCAACATACCGGGAAGCACACCCACCATGCCATACTTCTCTGGGCCAGTAGCAGATGACCTCATAAAATATACTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS-3UTR CAA 90 bp | AGGCCACCTTCCCCCAACATCTTCTCTCCCTTTGAAAACTCAATACACTGTATTTCCAAGAGAACCTCATaGTACTCAGCGCGGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPPSPNIFSPFENSIHCISKRTS*YSARLG Trigger: GCCCAACCGCGCTGAGTACAATGAGGTTCTCTTGGA...AATACAGTGTATTGAGTTTTCAAAGGGAGAGAAGATGTTGGGGGAAGGTGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGAACAGTGCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATGGTATTTCTCAGGCTTCAGGTCCTaGTGTATCACACCTTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QGTVLRHQSYPERRRWYFSGFRS*CITPLS Trigger: TGACAAAGGTGTGATACACAAGGACCTGAAGCCTGA...GAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGCACTGTTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | GGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCGGATTTCCTCTACATTaGGCCTGTTCCCAGATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GDGISRSVFPAHLFPLWGGFPLH*ACSQIL Trigger: TAAAATCTGGGAACAGGCCAAATGTAGAGGAAATCC...GCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | AGGCCACCTTCCCCCAACATCTTCTCTCCCTTTGAAAACTCAATACACTGTATTTCAGTGAAGCCCAGCTaGCGGGCACAGTTTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RPPSPNIFSPFENSIHCISVKPS*RAQFFH Trigger: GTGGAAAAACTGTGCCCGCAAGCTGGGCTTCACTGA...AATACAGTGTATTGAGTTTTCAAAGGGAGAGAAGATGTTGGGGGAAGGTGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | CAACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGCCACTTCTGAAGCATTaGGTAAACTTTCTCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLSSLLSCFPAWLPLLIWPLLKH*VNFLFQ Trigger: CTGAAAGAGAAAGTTTACCAAATGCTTCAGAAGTGG...CCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS GCA 90 bp | ATGAAAGTGGGACATCTATCTGGGTCTTTAGCACGTGCATCAGGTTaGCCTTCTCCATGTACTCCATCACCAGCGAATAGTTCCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MKVGHLSGSLARASG*PSPCTPSPANSSLL Trigger: AAGAAGGGAACTATTCGCTGGTGATGGAGTACATGGAGAAGGGCAACCTGATGCACGTGCTAAAGACCCAGATAGATGTCCCACTTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGGATGCCATCTTAATATaGTCCAAGGACATGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRWYFPISVSCTSVPSVGDAILI*SKDMSG Trigger: ACCAGACATGTCCTTGGACAATATTAAGATGGCATC...CCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | GGAGATGGTATTTCCCGATCAGTGTTTCCTGCACATCTGTTCCCTCTGTGGGGCTTCTCCTTAGTCAGTTaGCTCCATGTCTTAAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GDGISRSVFPAHLFPLWGFSLVS*LHVLKE Trigger: TTCCTTTAAGACATGGAGCAAACTGACTAAGGAGAA...GCCCCACAGAGGGAACAGATGTGCAGGAAACACTGATCGGGAAATACCATCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | AACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTTTCTCCTTAGTCAGTTaGCTCCATGTCTTAAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NCRVSSLVFRPGSPCLSGFSLVS*LHVLKE Trigger: TTCCTTTAAGACATGGAGCAAACTGACTAAGGAGAA...ACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | AACTGTCGAGTCTCCTCTCTTGTTTTCCGGCCTGGCTCCCCTTGCTTATCTGGTCTTTGCAAGTATTGTTaGGTGGTTGTGAATTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NCRVSSLVFRPGSPCLSGLCKYC*VVVNSV Trigger: GACTGAATTCACAACCACCAAACAATACTTGCAAAG...ACCAGATAAGCAAGGGGAGCCAGGCCGGAAAACAAGAGAGGAGACTCGACAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | GCTAAGGCACCAGTCATATCCAGAGAGGAGGAGATGGTATTTCCCGATCAGTGTCTCACTTCTTTCTGCTaGTTGTCTTTCTCCTTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AKAPVISREEEMVFPDQCLTSFC*LSFSLV Trigger: GACTAAGGAGAAAGACAACAAGCAGAAAGAAGTGAG...ACACTGATCGGGAAATACCATCTCCTCCTCTCTGGATATGACTGGTGCCTTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | TTTAGAAGAGCCGTGGCTCATAGAAGGCATTTGAGCAGAACTTTTCTGACTCACCAATGCCAAGAAATGTaGGCCTGTCTTCTGGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: FRRAVAHRRHLSRTFLTHQCQEM*ACLLGS Trigger: CGATCCCAGAAGACAGGCCAACATTTCTTGGCATTG...GTGAGTCAGAAAAGTTCTGCTCAAATGCCTTCTATGAGCCACGGCTCTTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS GCA 90 bp | GTTGTAAGCCTCATTCTGCCTTGGCTGCGGTTTTGTCTGTTTCTCTaGAAATATTCCAAAAGCATGATAGCTGGCTTCCTCTTGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VVSLILPWLRFCLFL*KYSKSMIAGFLLQL Trigger: AAGCTGCAAGAGGAAGCCAGCTATCATGCTTTTGGAATATTTGCAGAGAAACAGACAAAACCGCAGCCAAGGCAGAATGAGGCTTACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS TCA 90 bp | TTTGGCGGATACCAAACTCCTGTACCTGTAGTTCCAAATCCATGCTaGTTATACAATCCATTGTTCCAAACTGTTTGGGTGGCTGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FGGYQTPVPVVPNPC*LYNPLFQTVWVAGH Trigger: ATGGCCAGCCACCCAAACAGTTTGGAACAATGGATTGTATAATCAGCATGGATTTGGAACTACAGGTACAGGAGTTTGGTATCCGCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS GCA 90 bp | GCTTCAGGTCCTTGTGTATCACACCTTTGTCATGTAAGTAGCACATaGCTTCTATGGCCTCCACGATTATCCTTCCTTTCAATGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASGPCVSHLCHVSST*LLWPPRLSFLSMKV Trigger: CACTTTCATTGAAAGGAAGGATAATCGTGGAGGCCATAGAAGGCATGTGCTACTTACATGACAAAGGTGTGATACACAAGGACCTGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTCTCACACCTGGTGGGTGTTGTGAGGTTGACTTGTACTGTTGGCATCTTGGGATTTCCTCTACATTaGGCCTGTTCCCAGATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FFSHLVGVVRLTCTVGILGFPLH*ACSQIL Trigger: TAAAATCTGGGAACAGGCCAAATGTAGAGGAAATCC...CAAGATGCCAACAGTACAAGTCAACCTCACAACACCCACCAGGTGTGAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS TCA 90 bp | ACACAGTCATGCTGCAGTGAAAACATTCTCTGCAGCACTGGGCTTTaGTCTGGATACTCTTTCTTTAAACTTGCCACATCCTCTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: TQSCCSENILCSTGL*SGYSFFKLATSSST Trigger: TGTAGAAGAGGATGTGGCAAGTTTAAAGAAAGAGTATCCAGATCAAAGCCCAGTGCTGCAGAGAATGTTTTCACTGCAGCATGACTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CCA 90 bp | CCTTGTGTATCACACCTTTGTCATGTAAGTAGCACATGCCTTCTATaGCCTCCACGATTATCCTTCCTTTCAATGAAAGTGGGACATCTA | + |
|
Preference number: 5 (lower is better) Translates to: PCVSHLCHVSSTCLL*PPRLSFLSMKVGHL Trigger: TAGATGTCCCACTTTCATTGAAAGGAAGGATAATCGTGGAGGCCATAGAAGGCATGTGCTACTTACATGACAAAGGTGTGATACACAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS CCA 90 bp | TTCAGGTGTTCATCAGTCAGACTAGTGGTGTTATCAAAGATGGCTTaGTGTCTGGAAGTCGACTCTTCTTTGCAAGTATTGTTTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FRCSSVRLVVLSKMA*CLEVDSSLQVLFGG Trigger: ACCACCAAACAATACTTGCAAAGAAGAGTCGACTTCCAGACACCAAGCCATCTTTGATAACACCACTAGTCTGACTGATGAACACCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS-3UTR CAA 90 bp | TTGTACAGCACACTGGAGAAAACTGAGGAAACAGTTTATTGGGCACAGGGAACACTCACTTCTTTCTGCTaGTTGTCTTTCTCCTTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LYSTLEKTEETVYWAQGTLTSFC*LSFSLV Trigger: GACTAAGGAGAAAGACAACAAGCAGAAAGAAGTGAG...TGTTCCCTGTGCCCAATAAACTGTTTCCTCAGTTTTCTCCAGTGTGCTGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | TTTAGAAGAGCCGTGGCTCATAGAAGGCATTTGAGCAGAACTTTTCTGACTCACACTTCTTTCTGCTTGTaGTCTTTCTCCTTAGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FRRAVAHRRHLSRTFLTHTSFCL*SFSLVS Trigger: ACTGACTAAGGAGAAAGACAACAAGCAGAAAGAAGT...GTGAGTCAGAAAAGTTCTGCTCAAATGCCTTCTATGAGCCACGGCTCTTCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | AGGCCACCTTCCCCCAACATCTTCTCTCCCTTTGAAAACTCAATACACTGTATTACTTCTTTCTGCTTGTaGTCTTTCTCCTTAGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RPPSPNIFSPFENSIHCITSFCL*SFSLVS Trigger: ACTGACTAAGGAGAAAGACAACAAGCAGAAAGAAGT...AATACAGTGTATTGAGTTTTCAAAGGGAGAGAAGATGTTGGGGGAAGGTGGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACCTTTTTCTCCTTAGCACTCCTTAAAAATCTCTCACTAATTGATAATCAATGCCAAGAAATGTaGGCCTGTCTTCTGGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: PCTFFSLALLKNLSLIDNQCQEM*ACLLGS Trigger: CGATCCCAGAAGACAGGCCAACATTTCTTGGCATTG...ATTATCAATTAGTGAGAGATTTTTAAGGAGTGCTAAGGAGAAAAAGGTGCAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | AGGCCACCTTCCCCCAACATCTTCTCTCCCTTTGAAAACTCAATACACTGTATTCTTTGCAAGTATTGTTaGGTGGTTGTGAATTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPPSPNIFSPFENSIHCILCKYC*VVVNSV Trigger: GACTGAATTCACAACCACCAAACAATACTTGCAAAG...AATACAGTGTATTGAGTTTTCAAAGGGAGAGAAGATGTTGGGGGAAGGTGGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS TCA 90 bp | GTGTCTGGAAGTCGACTCTTCTTTGCAAGTATTGTTTGGTGGTTGTaGATTCAGTCCAACATCCATATAATTGTGGTTTCCAATCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSGSRLFFASIVWWL*IQSNIHIIVVSNLN Trigger: ATTCAGATTGGAAACCACAATTATATGGATGTTGGACTGAATTCACAACCACCAAACAATACTTGCAAAGAAGAGTCGACTTCCAGACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACCTTTTTCTCCTTAGCACTCCTTAAAAATCTCTCACTAATTGATAATGATGCCATCTTAATATaGTCCAAGGACATGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PCTFFSLALLKNLSLIDNDAILI*SKDMSG Trigger: ACCAGACATGTCCTTGGACAATATTAAGATGGCATC...ATTATCAATTAGTGAGAGATTTTTAAGGAGTGCTAAGGAGAAAAAGGTGCAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS-3UTR CAA 90 bp | TTAAAGCTTAAGGTGACAGTACAGCATTGGATGCTCAAGTTAACAGATCCTATACCACTTCTGAAGCATTaGGTAAACTTTCTCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKLKVTVQHWMLKLTDPIPLLKH*VNFLFQ Trigger: CTGAAAGAGAAAGTTTACCAAATGCTTCAGAAGTGG...TATAGGATCTGTTAACTTGAGCATCCAATGCTGTACTGTCACCTTAAGCTTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS GCA 72 bp | GTGCCTGGGCCAACTTTCCCACTGTGGCCCCTTTGGTaGCTTCCCGCATCAGCCACTTCTGAAGCATTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VPGPTFPLWPLW*LPASATSEAFG Trigger: ACCAAATGCTTCAGAAGTGGCTGATGCGGGAAGGCACCAAAGGGGCCACAGTGGGAAAGTTGGCCCAGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS GCA 72 bp | TCCTCCACAGGACCCATCTGGAGCCCCTGGGAACTGTaGAGCGATCCAGGTTGTTCTGAATTTGACCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSTGPIWSPWEL*SDPGCSEFDLL Trigger: GAGCAGGTCAAATTCAGAACAACCTGGATCGCTGCACAGTTCCCAGGGGCTCCAGATGGGTCCTGTGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CCA 72 bp | CTGCACACTGCGATCATTCTCGTCCTGTGGGTACTCTaGGGAGGAAGAAAACCAGGACTCCTCCACAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LHTAIILVLWVL*GGRKPGLLHRT Trigger: GGTCCTGTGGAGGAGTCCTGGTTTTCTTCCTCCCCAGAGTACCCACAGGACGAGAATGATCGCAGTGTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CCA 72 bp | GAAGTGCCTGGGCCAACTTTCCCACTGTGGCCCCTTTaGTGCCTTCCCGCATCAGCCACTTCTGAAGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: EVPGPTFPLWPL*CLPASATSEAF Trigger: AAATGCTTCAGAAGTGGCTGATGCGGGAAGGCACCAAAGGGGCCACAGTGGGAAAGTTGGCCCAGGCACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CCA 72 bp | AACATTGGTGAAGTGCCTGGGCCAACTTTCCCACTGTaGCCCCTTTGGTGCCTTCCCGCATCAGCCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: NIGEVPGPTFPL*PLWCLPASATS Trigger: AGAAGTGGCTGATGCGGGAAGGCACCAAAGGGGCCACAGTGGGAAAGTTGGCCCAGGCACTTCACCAATGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CAA 90 bp | CTGGCTGGCACGAATCAAGTGGTTCAGCAGGTCTATCCTGCAACATaGGTGAAGTGCCTGGGCCAACTTTCCCACTGTGGCCCCTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LAGTNQVVQQVYPAT*VKCLGQLSHCGPFG Trigger: ACCAAAGGGGCCACAGTGGGAAAGTTGGCCCAGGCACTTCACCAATGTTGCAGGATAGACCTGCTGAACCACTTGATTCGTGCCAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS GCA 72 bp | CTGCTACTGGCCCAGAGAAGTATGGCATGGTGGGTGTaGTTCCCGGTATGTTGGTCTCTGGCACTGGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLAQRSMAWWV*FPVCWSLALEF Trigger: AAACTCCAGTGCCAGAGACCAACATACCGGGAAGCACACCCACCATGCCATACTTCTCTGGGCCAGTAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS GCA 72 bp | GTGGTTCAGCAGGTCTATCCTGCAACATTGGTGAAGTaGCTGGGCCAACTTTCCCACTGTGGCCCCTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VVQQVYPATLVK*LGQLSHCGPFG Trigger: ACCAAAGGGGCCACAGTGGGAAAGTTGGCCCAGGCACTTCACCAATGTTGCAGGATAGACCTGCTGAACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CCA 72 bp | CAGCTTAGCCTGCACACTGCGATCATTCTCGTCCTGTaGGTACTCTGGGGAGGAAGAAAACCAGGACTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QLSLHTAIILVL*VLWGGRKPGLL Trigger: GAGGAGTCCTGGTTTTCTTCCTCCCCAGAGTACCCACAGGACGAGAATGATCGCAGTGTGCAGGCTAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS TCA 72 bp | ATCAAGTGGTTCAGCAGGTCTATCCTGCAACATTGGTaGAGTGCCTGGGCCAACTTTCCCACTGTGGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: IKWFSRSILQHW*SAWANFPTVAP Trigger: AGGGGCCACAGTGGGAAAGTTGGCCCAGGCACTTCACCAATGTTGCAGGATAGACCTGCTGAACCACTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS GCA 72 bp | TCAGTGAAGCCCAGCTTGCGGGCACAGTTTTTCCACTaGCTTCCCAGGTTTTCCCTGATAGGGTTCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SVKPSLRAQFFH*LPRFSLIGFRC Trigger: ACACCTGAACCCTATCAGGGAAAACCTGGGAAGGCAGTGGAAAAACTGTGCCCGCAAGCTGGGCTTCACTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CAA 90 bp | TCTGGAGCCCCTGGGAACTGTGCAGCGATCCAGGTTGTTCTGAATTaGACCTGCTCGGAGGTAAGGGTACACAGTCATGCTGCAGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SGAPGNCAAIQVVLN*TCSEVRVHSHAAVK Trigger: TTTCACTGCAGCATGACTGTGTACCCTTACCTCCGAGCAGGTCAAATTCAGAACAACCTGGATCGCTGCACAGTTCCCAGGGGCTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS GCA 72 bp | GCCAAAGCTGTACACGTCCGACTTCTCCGTGGGCTTTaGATTGATGTCATTCAGGTGTTCGGGTGCCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: AKAVHVRLLRGL*IDVIQVFGCHV Trigger: TACATGGCACCCGAACACCTGAATGACATCAATGCAAAGCCCACGGAGAAGTCGGACGTGTACAGCTTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CCA 72 bp | CTGCCAGCACCGCTCCATGAGGCTGATGATCTCCCTTaGACAGTACTCAAGGATTTCCTCTACATTTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPAPLHEADDLP*TVLKDFLYIWP Trigger: AGGCCAAATGTAGAGGAAATCCTTGAGTACTGTCCAAGGGAGATCATCAGCCTCATGGAGCGGTGCTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CCA 72 bp | TTCTTCTTCAATGCCAAGAAATGTTGGCCTGTCTTCTaGGATCGCCTGCCAGCACCGCTCCATGAGGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: FFFNAKKCWPVF*DRLPAPLHEAD Trigger: ATCAGCCTCATGGAGCGGTGCTGGCAGGCGATCCCAGAAGACAGGCCAACATTTCTTGGCATTGAAGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CAA 72 bp | CCTGGGAACTGTGCAGCGATCCAGGTTGTTCTGAATTaGACCTGCTCGGAGGTAAGGGTACACAGTCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGNCAAIQVVLN*TCSEVRVHSHA Trigger: AGCATGACTGTGTACCCTTACCTCCGAGCAGGTCAAATTCAGAACAACCTGGATCGCTGCACAGTTCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS CAA 72 bp | ACGAATCAAGTGGTTCAGCAGGTCTATCCTGCAACATaGGTGAAGTGCCTGGGCCAACTTTCCCACTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: TNQVVQQVYPAT*VKCLGQLSHCG Trigger: GCCACAGTGGGAAAGTTGGCCCAGGCACTTCACCAATGTTGCAGGATAGACCTGCTGAACCACTTGATTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS TCA 72 bp | CATAGTCATGGTCGATTTCATCGATCTGAGACTCAGTaGAGCCCAGCTTGCGGGCACAGTTTTTCCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: HSHGRFHRSETQ*SPACGHSFSTA Trigger: GGCAGTGGAAAAACTGTGCCCGCAAGCTGGGCTTCACTGAGTCTCAGATCGATGAAATCGACCATGACTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS GCA 72 bp | ATGACAGCTGTTGCACTGCAATTCCACGACTCGTTGTaGTGGGATCAGAATGACCTCTTGCTCCTGCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: MTAVALQFHDSL*WDQNDLLLLHS Trigger: AGAGTGCAGGAGCAAGAGGTCATTCTGATCCCAGCACAACGAGTCGTGGAATTGCAGTGCAACAGCTGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS GCA 72 bp | GATCGGCTATCTGGGTCTTTAGCACGTGCATCAGGTTaGCCTTCTCCATGTACTCCATCACCAGCGAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: DRLSGSLARASG*PSPCTPSPANS Trigger: ACTATTCGCTGGTGATGGAGTACATGGAGAAGGGCAACCTGATGCACGTGCTAAAGACCCAGATAGCCGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171137.2 |
||
| CDS CCA 72 bp | CATGTCTTAAAGGAAGCCACACCAAGATCGGCTATCTaGGTCTTTAGCACGTGCATCAGGTTGCCCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HVLKEATPRSAI*VFSTCIRLPFS Trigger: GGAGAAGGGCAACCTGATGCACGTGCTAAAGACCCAGATAGCCGATCTTGGTGTGGCTTCCTTTAAGACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171137.2 |
||
| CDS TCA 72 bp | AGCTGTACACGTCCGACTTCTCCGTGGGCTTTGCATTaGTGTCATTCAGGTGTTCGGGTGCCATGTAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SCTRPTSPWALH*CHSGVRVPCSK Trigger: TTTACTACATGGCACCCGAACACCTGAATGACATCAATGCAAAGCCCACGGAGAAGTCGGACGTGTACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS GCA 72 bp | GGACATCTATCTGGGTCTTTAGCACGTGCATCAGGTTaGCCTTCTCCATGTACTCCATCACCAGCGAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: GHLSGSLARASG*PSPCTPSPANS Trigger: ACTATTCGCTGGTGATGGAGTACATGGAGAAGGGCAACCTGATGCACGTGCTAAAGACCCAGATAGATGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
||
| CDS GCA 72 bp | GAATTTGACCTGCTCGGAGGTAAGGGTACACAGTCATaGTGCAGTGAAAACATTCTCTGCAGCACTGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EFDLLGGKGTQS*CSENILCSTGL Trigger: AAGCCCAGTGCTGCAGAGAATGTTTTCACTGCAGCATGACTGTGTACCCTTACCTCCGAGCAGGTCAAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
||
| CDS GCA 72 bp | ACTCGTTGTGCTGGGATCAGAATGACCTCTTGCTCCTaGACTCTTAATATTCTCACGAGCTCTCTGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: TRCAGIRMTSCS*TLNILTSSLLC Trigger: GCACAGCAGAGAGCTCGTGAGAATATTAAGAGTGCAGGAGCAAGAGGTCATTCTGATCCCAGCACAACGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CAA 72 bp | CTGTGCATCATCTTCCCCTCTTCCAAGAGAACCTCATaGTACTCAGCGCGGTTGGGCCCTGTGTATACTTTT | + |
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Preference number: 6 (lower is better) Translates to: LCIIFPSSKRTS*YSARLGPVYTF Trigger: AAAAGTATACACAGGGCCCAACCGCGCTGAGTACAATGAGGTTCTCTTGGAAGAGGGGAAGATGATGCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS GCA 72 bp | TCCTGCACTCTTAATATTCTCACGAGCTCTCTGCTGTaGAAAGGGGTCATGAGAGACCCTTCGTTTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SCTLNILTSSLL*KGVMRDPSFPF Trigger: GAAAGGAAACGAAGGGTCTCTCATGACCCCTTTGCACAGCAGAGAGCTCGTGAGAATATTAAGAGTGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS TCA 72 bp | ACTGCAATTCCACGACTCGTTGTGCTGGGATCAGAATaGCCTCTTGCTCCTGCACTCTTAATATTCTCACGA | + |
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Preference number: 6 (lower is better) Translates to: TAIPRLVVLGSE*PLAPALLIFSR Trigger: TCGTGAGAATATTAAGAGTGCAGGAGCAAGAGGTCATTCTGATCCCAGCACAACGAGTCGTGGAATTGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS GCA 72 bp | CGTGGGCTTTGCATTGATGTCATTCAGGTGTTCGGGTaGCATGTAGTAAAGGGTACCACCATTGTTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: RGLCIDVIQVFG*HVVKGTTIVLL Trigger: AAGAAGAACAATGGTGGTACCCTTTACTACATGGCACCCGAACACCTGAATGACATCAATGCAAAGCCCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CCA 72 bp | GCTGATTATACAATCCATTGTTCCAAACTGTTTGGGTaGCTGGCCATGACAGCTGTTGCACTGCAATTCCAC | + |
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Preference number: 6 (lower is better) Translates to: ADYTIHCSKLFG*LAMTAVALQFH Trigger: GTGGAATTGCAGTGCAACAGCTGTCATGGCCAGCCACCCAAACAGTTTGGAACAATGGATTGTATAATCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CCA 72 bp | TGGCATGGTGGGTGTGCTTCCCGGTATGTTGGTCTCTaGCACTGGAGTTTTATAAGTACTATACATTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: WHGGCASRYVGL*HWSFISTIHLA Trigger: AGCCAAATGTATAGTACTTATAAAACTCCAGTGCCAGAGACCAACATACCGGGAAGCACACCCACCATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CAA 72 bp | TGCAAATATTCCAAAAGCATGATAGCTGGCTTCCTCTaGCAGCTTAGCCTGCACACTGCGATCATTCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: CKYSKSMIAGFL*QLSLHTAIILV Trigger: GACGAGAATGATCGCAGTGTGCAGGCTAAGCTGCAAGAGGAAGCCAGCTATCATGCTTTTGGAATATTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CAA 90 bp | GTTCAGGTGTTCATCAGTCAGACTAGTGGTGTTATCAAAGATGGCTaGGTGTCTGGAAGTCGACTCTTCTTTGCAAGTATTGTTTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: VQVFISQTSGVIKDG*VSGSRLFFASIVWW Trigger: CCACCAAACAATACTTGCAAAGAAGAGTCGACTTCCAGACACCAAGCCATCTTTGATAACACCACTAGTCTGACTGATGAACACCTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS TCA 72 bp | TGCTGCAGTGAAAACATTCTCTGCAGCACTGGGCTTTaGTCTGGATACTCTTTCTTTAAACTTGCCACATCC | + |
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Preference number: 6 (lower is better) Translates to: CCSENILCSTGL*SGYSFFKLATS Trigger: GGATGTGGCAAGTTTAAAGAAAGAGTATCCAGATCAAAGCCCAGTGCTGCAGAGAATGTTTTCACTGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CAA 72 bp | TCTCCCTTGGACAGTACTCAAGGATTTCCTCTACATTaGGCCTGTTCCCAGATTTTATGCAGATCACGAACT | + |
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Preference number: 6 (lower is better) Translates to: SPLDSTQGFPLH*ACSQILCRSRT Trigger: AGTTCGTGATCTGCATAAAATCTGGGAACAGGCCAAATGTAGAGGAAATCCTTGAGTACTGTCCAAGGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS TCA 72 bp | TTAAAGGAAGCCACACCAAGATCGGCTATCTTAATGTaGAAGTCACGATCAACGAGGATATTCTCAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LKEATPRSAILM*KSRSTRIFSGF Trigger: GAAGCCTGAGAATATCCTCGTTGATCGTGACTTTCACATTAAGATAGCCGATCTTGGTGTGGCTTCCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| CDS GCA 72 bp | CAAAGATGGCTTGGTGTCTGGAAGTCGACTCTTCTTTaGAAGTATTGTTTGGTGGTTGTGAATTCAGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: QRWLGVWKSTLL*KYCLVVVNSVQ Trigger: TTGGACTGAATTCACAACCACCAAACAATACTTGCAAAGAAGAGTCGACTTCCAGACACCAAGCCATCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CCA 72 bp | TCACACCTTTGTCATGTAAGTAGCACATGCCTTCTATaGCCTCCACGATTATCCTTCCTTTCAATGAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SHLCHVSSTCLL*PPRLSFLSMKV Trigger: CACTTTCATTGAAAGGAAGGATAATCGTGGAGGCCATAGAAGGCATGTGCTACTTACATGACAAAGGTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 |
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| CDS CCA 72 bp | ATTGAATATAGTATATTTTATGAGGTCATCTGCTACTaGCCCAGAGAAGTATGGCATGGTGGGTGTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: IEYSIFYEVICY*PREVWHGGCAS Trigger: GGAAGCACACCCACCATGCCATACTTCTCTGGGCCAGTAGCAGATGACCTCATAAAATATACTATATTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CAA 72 bp | GCTTGGTGTCTGGAAGTCGACTCTTCTTTGCAAGTATaGTTTGGTGGTTGTGAATTCAGTCCAACATCCATA | + |
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Preference number: 6 (lower is better) Translates to: AWCLEVDSSLQV*FGGCEFSPTSI Trigger: TATGGATGTTGGACTGAATTCACAACCACCAAACAATACTTGCAAAGAAGAGTCGACTTCCAGACACCAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS CAA 72 bp | TCAAAGATGGCTTGGTGTCTGGAAGTCGACTCTTCTTaGCAAGTATTGTTTGGTGGTTGTGAATTCAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SKMAWCLEVDSS*QVLFGGCEFSP Trigger: TGGACTGAATTCACAACCACCAAACAATACTTGCAAAGAAGAGTCGACTTCCAGACACCAAGCCATCTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS TCA 72 bp | TACCAAACTCCTGTACCTGTAGTTCCAAATCCATGCTaGTTATACAATCCATTGTTCCAAACTGTTTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: YQTPVPVVPNPC*LYNPLFQTVWV Trigger: CACCCAAACAGTTTGGAACAATGGATTGTATAATCAGCATGGATTTGGAACTACAGGTACAGGAGTTTGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS GCA 72 bp | AGAACTATTGAATATAGTATATTTTATGAGGTCATCTaGTACTGGCCCAGAGAAGTATGGCATGGTGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RTIEYSIFYEVI*YWPREVWHGGC Trigger: ACACCCACCATGCCATACTTCTCTGGGCCAGTAGCAGATGACCTCATAAAATATACTATATTCAATAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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| CDS TCA 72 bp | AGTCGACTCTTCTTTGCAAGTATTGTTTGGTGGTTGTaGATTCAGTCCAACATCCATATAATTGTGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SRLFFASIVWWL*IQSNIHIIVVS Trigger: GGAAACCACAATTATATGGATGTTGGACTGAATTCACAACCACCAAACAATACTTGCAAAGAAGAGTCGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021844.15 ENSMUST00000167374.9 ENSMUST00000171137.2 |
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