Pregenerated sensors for RIOX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022724Ensembl transcript IDs: ENSMUST00000023407.12, ENSMUST00000120667.2, ENSMUST00000120674.8, ENSMUST00000138324.2, ENSMUST00000160571.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGTGGCACACGCCTTTAATCCCAGAGGAAGAGGCAGGTGGATTTaGGTTCGAGGCCAGCCTGGTCTACAGAGATCAGTTCCAGGACAG | + |
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Preference number: 1 (lower is better) Translates to: VVAHAFNPRGRGRWI*VRGQPGLQRSVPGQ Trigger: CTGTCCTGGAACTGATCTCTGTAGACCAGGCTGGCCTCGAACTCAAATCCACCTGCCTCTTCCTCTGGGATTAAAGGCGTGTGCCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR CCA 90 bp | AGCCTAATTTATTTTGGAGAAAAGCCACAGGATGCCGGGCAGTGGTaGCACACGCCTTTAATCCCAGAGGAAGAGGCAGGTGGATTTGAG | + |
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Preference number: 1 (lower is better) Translates to: SLIYFGEKPQDAGQW*HTPLIPEEEAGGFE Trigger: CTCAAATCCACCTGCCTCTTCCTCTGGGATTAAAGGCGTGTGCCACCACTGCCCGGCATCCTGTGGCTTTTCTCCAAAATAAATTAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR CCA 90 bp | AAGAGCCTAATTTATTTTGGAGAAAAGCCACAGGATGCCGGGCAGTaGTGGCACACGCCTTTAATCCCAGAGGAAGAGGCAGGTGGATTT | + |
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Preference number: 1 (lower is better) Translates to: KSLIYFGEKPQDAGQ*WHTPLIPEEEAGGF Trigger: AAATCCACCTGCCTCTTCCTCTGGGATTAAAGGCGTGTGCCACCACTGCCCGGCATCCTGTGGCTTTTCTCCAAAATAAATTAGGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR CCA 90 bp | ATTGTCCCAGCCACAACCCAAACTCTAGGAAAGACATTTTTCAGCTaGAACACACCTCGGATTCCTCCTCTTCTCCTATCATGTGCATCT | + |
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Preference number: 1 (lower is better) Translates to: IVPATTQTLGKTFFS*NTPRIPPLLLSCAS Trigger: AGATGCACATGATAGGAGAAGAGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTGGGTTGTGGCTGGGACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
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| 3UTR TCA 90 bp | AACTGTGACCTATTAACAAACCATATGGAGTCCAAACATGTTGGATaGAGTTCAGTGACTGTGCTGGCTTTACTGAGAAGAGGACGCTAT | + |
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Preference number: 1 (lower is better) Translates to: NCDLLTNHMESKHVG*SSVTVLALLRRGRY Trigger: ATAGCGTCCTCTTCTCAGTAAAGCCAGCACAGTCACTGAACTTCATCCAACATGTTTGGACTCCATATGGTTTGTTAATAGGTCACAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR TCA 90 bp | AAAATGGGTCAACACGGAAAAAGCTTTGAGACACATCTTCATGAATaGAGACCACCGGGTTTCCCTATTTATAGATCTCAGAGGTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: KMGQHGKSFETHLHE*RPPGFPIYRSQRSF Trigger: GAAGGACCTCTGAGATCTATAAATAGGGAAACCCGGTGGTCTTCATTCATGAAGATGTGTCTCAAAGCTTTTTCCGTGTTGACCCATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR TCA 90 bp | ATAGTACAAACATTAGGTTTGCTGAGAACACCGATGAACAAGGCTTaGGAGTCAGTTCTACCACTGGACTGTAAGGAATCTAGTATTGAG | + |
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Preference number: 1 (lower is better) Translates to: IVQTLGLLRTPMNKA*ESVLPLDCKESSIE Trigger: CTCAATACTAGATTCCTTACAGTCCAGTGGTAGAACTGACTCTCAAGCCTTGTTCATCGGTGTTCTCAGCAAACCTAATGTTTGTACTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR CCA 90 bp | GTTCTACCACTGGACTGTAAGGAATCTAGTATTGAGAATAGCAAGTaGGGAAAAATGGGTCAACACGGAAAAAGCTTTGAGACACATCTT | + |
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Preference number: 1 (lower is better) Translates to: VLPLDCKESSIENSK*GKMGQHGKSFETHL Trigger: AAGATGTGTCTCAAAGCTTTTTCCGTGTTGACCCATTTTTCCCCACTTGCTATTCTCAATACTAGATTCCTTACAGTCCAGTGGTAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR TCA 90 bp | CTTTCTCATTTATCTTGGCTCTCCGGTCTTTGCATCTTCAAACTGTaGCCTATTAACAAACCATATGGAGTCCAAACATGTTGGATGAAG | + |
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Preference number: 1 (lower is better) Translates to: LSHLSWLSGLCIFKL*PINKPYGVQTCWMK Trigger: CTTCATCCAACATGTTTGGACTCCATATGGTTTGTTAATAGGTCACAGTTTGAAGATGCAAAGACCGGAGAGCCAAGATAAATGAGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR TCA 90 bp | TTAAAGGAGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTaGCATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: LKELFLPKKQDEPGY*HNLYDMCTAVVPFL Trigger: TAGAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAACTCCTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGAGGAAGAGGCAGGTGGATTTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGGGAGACAGGTGTGTaGAACAGTTGGATCCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SQRKRQVDLSSRPAWSTEWETGV*NSWIPR Trigger: TCTAGGGATCCAACTGTTCCACACACCTGTCTCCCA...CTCTGTAGACCAGGCTGGCCTCGAACTCAAATCCACCTGCCTCTTCCTCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGAGGAAGAGGCAGGTGGATTTGAGTTCGAGGCCAGCCTGGTCTACAGAGTTGGGTGTTACCATGTaGCTTCAAGTACAGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: SQRKRQVDLSSRPAWSTELGVTM*LQVQQQ Trigger: CTGTTGCTGTACTTGAAGGCACATGGTAACACCCAA...CTCTGTAGACCAGGCTGGCCTCGAACTCAAATCCACCTGCCTCTTCCTCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGAGGAAGAGGCAGGTGGATTTGAGTTCGAGGCCAGCCTGGTCTACAGAGCTTTCTCATTTATCTTaGCTCTCCGGTCTTTGCATC | + |
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Preference number: 2 (lower is better) Translates to: SQRKRQVDLSSRPAWSTELSHLS*LSGLCI Trigger: GATGCAAAGACCGGAGAGCCAAGATAAATGAGAAAG...CTCTGTAGACCAGGCTGGCCTCGAACTCAAATCCACCTGCCTCTTCCTCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCACCACTGGGAAGCCAGGCCTTGGCTCTTGTTCTCTGGTGTCCCAAGAAAGAGATCCTTACCATATaGAAAACTAAGTCAGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LAPLGSQALALVLWCPKKEILTI*KTKSVH Trigger: GTGGACTGACTTAGTTTTGCATATGGTAAGGATCTC...TTTCTTGGGACACCAGAGAACAAGAGCCAAGGCCTGGCTTCCCAGTGGTGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCTTTCTCATTTATCTTGGCTCTCCGGTCTTTGCATCTTCAAACTGTGACAGGACGCTATCTTCATaGATGATGGCCACCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: CSFLIYLGSPVFASSNCDRTLSS*MMATQE Trigger: CTCCTGGGTGGCCATCATCCATGAAGATAGCGTCCT...GTCACAGTTTGAAGATGCAAAGACCGGAGAGCCAAGATAAATGAGAAAGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR-3UTR TCA 90 bp | AAGACGAGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCGTGTCCACAAGGACATaGACCAGCTTCTTCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: KTSQVTDIIFMTCVLQLCVSTRT*TSFFSL Trigger: CAAGGAGAAGAAGCTGGTTCATGTCCTTGTGGACAC...GCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAGGCTTGAGAGTCAGTTCTACCACTGGACTGTAAGGAATCTAGTATTGAGAGGTAAGAAGAATACCTaGTGGGCAAGCAGAAGGACC | + |
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Preference number: 2 (lower is better) Translates to: TRLESQFYHWTVRNLVLRGKKNT*WASRRT Trigger: GGTCCTTCTGCTTGCCCAGCAGGTATTCTTCTTACC...TCTCAATACTAGATTCCTTACAGTCCAGTGGTAGAACTGACTCTCAAGCCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCTTTCTCATTTATCTTGGCTCTCCGGTCTTTGCATCTTCAAACTGTGACAAGCTACCTACCACTTaGAGAGACGTAGGCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: CSFLIYLGSPVFASSNCDKLPTT*RDVGRK Trigger: CTTCCTGCCTACGTCTCTCCAAGTGGTAGGTAGCTT...GTCACAGTTTGAAGATGCAAAGACCGGAGAGCCAAGATAAATGAGAAAGCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR-3UTR TCA 90 bp | CGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCTCGTGTCCACAAGGACATaGACCAGCTTCTTCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: RSIVLSESGMPNNFLVFLVSTRT*TSFFSL Trigger: CAAGGAGAAGAAGCTGGTTCATGTCCTTGTGGACAC...GAGGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTTCTGTAGCTTTCTCATTTATCTTGGCTCTCCGGTCTTTGCATCTTCAAACGTGTTCTCATCACAATaGTCTCCATCATCAAACCAG | + |
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Preference number: 2 (lower is better) Translates to: QFCSFLIYLGSPVFASSNVFSSQ*SPSSNQ Trigger: CTGGTTTGATGATGGAGATCATTGTGATGAGAACAC...GTTTGAAGATGCAAAGACCGGAGAGCCAAGATAAATGAGAAAGCTACAGAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGCTTTCTCATTTATCTTGGCTCTCCGGTCTTTGCATCTTCAAACTGTGACTACCCACATAAAAGCTaGTGTGGCAAAATATGTCTG | + |
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Preference number: 2 (lower is better) Translates to: CSFLIYLGSPVFASSNCDYPHKS*CGKICL Trigger: CAGACATATTTTGCCACATCAGCTTTTATGTGGGTA...GTCACAGTTTGAAGATGCAAAGACCGGAGAGCCAAGATAAATGAGAAAGCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTGACATAATCTTTATGTGTGTACTGCAGTTGTaGCTTTTCTACAACACTGCA | + |
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Preference number: 2 (lower is better) Translates to: SYFFQRSKTSQVTDIIFMCVLQL*LFYNTA Trigger: TGCAGTGTTGTAGAAAAGGCACAACTGCAGTACACA...CATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTGACATAATCTTTATGTGCCTAATAATTTCCTaGTTTTCCTCTCGTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SYFFQRSKTSQVTDIIFMCLIIS*FSSRVH Trigger: GTGGACACGAGAGGAAAACCAGGAAATTATTAGGCA...CATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| 3UTR TCA 72 bp | AATCTCTGGCTCTTCTGTCATCTTCCAAGCAGCGTCTaGGAGCTCTGCACGGGCACAGATGCTGGGTACCTC | + |
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Preference number: 3 (lower is better) Translates to: NLWLFCHLPSSV*ELCTGTDAGYL Trigger: GAGGTACCCAGCATCTGTGCCCGTGCAGAGCTCTCAGACGCTGCTTGGAAGATGACAGAAGAGCCAGAGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023407.12 |
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| 3UTR CCA 72 bp | AGGGCCTGGCTCTCTATTCTTAATATCTGGCACCACTaGGAAGCCAGGCCTTGGCTCTTGTTCTCTGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: RAWLSILNIWHH*EARPWLLFSGV Trigger: GACACCAGAGAACAAGAGCCAAGGCCTGGCTTCCCAGTGGTGCCAGATATTAAGAATAGAGAGCCAGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR CCA 72 bp | TATTTTGGAGAAAAGCCACAGGATGCCGGGCAGTGGTaGCACACGCCTTTAATCCCAGAGGAAGAGGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: YFGEKPQDAGQW*HTPLIPEEEAG Trigger: ACCTGCCTCTTCCTCTGGGATTAAAGGCGTGTGCCACCACTGCCCGGCATCCTGTGGCTTTTCTCCAAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR TCA 72 bp | CACGCCTTTAATCCCAGAGGAAGAGGCAGGTGGATTTaGGTTCGAGGCCAGCCTGGTCTACAGAGATCAGTT | + |
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Preference number: 3 (lower is better) Translates to: HAFNPRGRGRWI*VRGQPGLQRSV Trigger: AACTGATCTCTGTAGACCAGGCTGGCCTCGAACTCAAATCCACCTGCCTCTTCCTCTGGGATTAAAGGCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR GCA 72 bp | TCGTGTCCACAAGGACATGAACCAGCTTCTTCTCCTTaGTCCTCTAGGTCACTACACCTCCACCCACAGTAC | + |
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Preference number: 3 (lower is better) Translates to: SCPQGHEPASSP*SSRSLHLHPQY Trigger: GTACTGTGGGTGGAGGTGTAGTGACCTAGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTTGTGGACACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| 3UTR CCA 72 bp | AAAGGCTACAGGGCCTGGCTCTCTATTCTTAATATCTaGCACCACTGGGAAGCCAGGCCTTGGCTCTTGTTC | + |
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Preference number: 3 (lower is better) Translates to: KGYRAWLSILNI*HHWEARPWLLF Trigger: GAACAAGAGCCAAGGCCTGGCTTCCCAGTGGTGCCAGATATTAAGAATAGAGAGCCAGGCCCTGTAGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR CCA 72 bp | ATTTATTTTGGAGAAAAGCCACAGGATGCCGGGCAGTaGTGGCACACGCCTTTAATCCCAGAGGAAGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: IYFGEKPQDAGQ*WHTPLIPEEEA Trigger: TGCCTCTTCCTCTGGGATTAAAGGCGTGTGCCACCACTGCCCGGCATCCTGTGGCTTTTCTCCAAAATAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTGGCACCACTGGGAAGCCAGGCCTTGGCTCTTGTTCTCTGGTGTCCCAAGAGTTAACATGTCTCTTTaGATATCTGATGAATCACCC | + |
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Preference number: 3 (lower is better) Translates to: IWHHWEARPWLLFSGVPRVNMSL*ISDESP Trigger: GGGTGATTCATCAGATATCAAAAGAGACATGTTAAC...TCTTGGGACACCAGAGAACAAGAGCCAAGGCCTGGCTTCCCAGTGGTGCCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR GCA 72 bp | GAAGATAACCGGAAGTATCACTTGGGTGTTACCATGTaGCTTCAAGTACAGCAACAGGACAGCACAGAGATC | + |
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Preference number: 3 (lower is better) Translates to: EDNRKYHLGVTM*LQVQQQDSTEI Trigger: GATCTCTGTGCTGTCCTGTTGCTGTACTTGAAGGCACATGGTAACACCCAAGTGATACTTCCGGTTATCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR CCA 72 bp | GAGCTCTGCACGGGCACAGATGCTGGGTACCTCTTATaGGTGTGGCAGTATTACACGAAACATGTTTATTTT | + |
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Preference number: 3 (lower is better) Translates to: ELCTGTDAGYLL*VWQYYTKHVYF Trigger: AAAATAAACATGTTTCGTGTAATACTGCCACACCCATAAGAGGTACCCAGCATCTGTGCCCGTGCAGAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023407.12 |
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| 3UTR CCA 72 bp | GCCACAACCCAAACTCTAGGAAAGACATTTTTCAGCTaGAACACACCTCGGATTCCTCCTCTTCTCCTATCA | + |
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Preference number: 3 (lower is better) Translates to: ATTQTLGKTFFS*NTPRIPPLLLS Trigger: TGATAGGAGAAGAGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTGGGTTGTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
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| 3UTR CCA 72 bp | TGCACGGGCACAGATGCTGGGTACCTCTTATGGGTGTaGCAGTATTACACGAAACATGTTTATTTTAATGGG | + |
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Preference number: 3 (lower is better) Translates to: CTGTDAGYLLWV*QYYTKHVYFNG Trigger: CCCATTAAAATAAACATGTTTCGTGTAATACTGCCACACCCATAAGAGGTACCCAGCATCTGTGCCCGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023407.12 |
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| 3UTR CCA 72 bp | ATTCTTAATATCTGGCACCACTGGGAAGCCAGGCCTTaGCTCTTGTTCTCTGGTGTCCCAAGAAATCATTTA | + |
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Preference number: 3 (lower is better) Translates to: ILNIWHHWEARP*LLFSGVPRNHL Trigger: TAAATGATTTCTTGGGACACCAGAGAACAAGAGCCAAGGCCTGGCTTCCCAGTGGTGCCAGATATTAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR TCA 72 bp | ACATTAGGTTTGCTGAGAACACCGATGAACAAGGCTTaGGAGTCAGTTCTACCACTGGACTGTAAGGAATCT | + |
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Preference number: 3 (lower is better) Translates to: TLGLLRTPMNKA*ESVLPLDCKES Trigger: AGATTCCTTACAGTCCAGTGGTAGAACTGACTCTCAAGCCTTGTTCATCGGTGTTCTCAGCAAACCTAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR CCA 72 bp | TCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTaGTTTTCCTCTCGTGTCCACAAGGACATGAACCAG | + |
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Preference number: 3 (lower is better) Translates to: SFYQSLGCLIIS*FSSRVHKDMNQ Trigger: CTGGTTCATGTCCTTGTGGACACGAGAGGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| 3UTR-3UTR CAA 90 bp | ACCCAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTGATGTAAACCACCTTTaGTTGAGCTTCATCACAAGA | + |
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Preference number: 3 (lower is better) Translates to: TQTLGKTFFSWNTPRIPPDVNHL*LSFITR Trigger: TCTTGTGATGAAGCTCAACAAAAGGTGGTTTACATC...AGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
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| 3UTR TCA 72 bp | CAACACGGAAAAAGCTTTGAGACACATCTTCATGAATaGAGACCACCGGGTTTCCCTATTTATAGATCTCAG | + |
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Preference number: 3 (lower is better) Translates to: QHGKSFETHLHE*RPPGFPIYRSQ Trigger: CTGAGATCTATAAATAGGGAAACCCGGTGGTCTTCATTCATGAAGATGTGTCTCAAAGCTTTTTCCGTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR CCA 72 bp | ATGATTGCTACAGATTCTAAACATCTAAACAGGTACTaGGGAGATAGCCTAGTGGGTAAGAAGAATACCTGC | + |
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Preference number: 3 (lower is better) Translates to: MIATDSKHLNRY*GDSLVGKKNTC Trigger: GCAGGTATTCTTCTTACCCACTAGGCTATCTCCCCAGTACCTGTTTAGATGTTTAGAATCTGTAGCAATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR CCA 72 bp | CTGGACTGTAAGGAATCTAGTATTGAGAATAGCAAGTaGGGAAAAATGGGTCAACACGGAAAAAGCTTTGAG | + |
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Preference number: 3 (lower is better) Translates to: LDCKESSIENSK*GKMGQHGKSFE Trigger: CTCAAAGCTTTTTCCGTGTTGACCCATTTTTCCCCACTTGCTATTCTCAATACTAGATTCCTTACAGTCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR TCA 72 bp | CTATTAACAAACCATATGGAGTCCAAACATGTTGGATaGAGTTCAGTGACTGTGCTGGCTTTACTGAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: LLTNHMESKHVG*SSVTVLALLRR Trigger: TCTTCTCAGTAAAGCCAGCACAGTCACTGAACTTCATCCAACATGTTTGGACTCCATATGGTTTGTTAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| 3UTR TCA 72 bp | TTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTaGCATAATCTTTATGACATGTGTACTGCAGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: LFLPKKQDEPGY*HNLYDMCTAVV Trigger: CACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| 3UTR TCA 72 bp | AAAGAGACTAAAGCTTTAATACAAATAAACACACAGTaGCTGACATACAGGCGGTATAGTACAAACATTAGG | + |
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Preference number: 3 (lower is better) Translates to: KETKALIQINTQ*LTYRRYSTNIR Trigger: CCTAATGTTTGTACTATACCGCCTGTATGTCAGTCACTGTGTGTTTATTTGTATTAAAGCTTTAGTCTCTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| CDS-3UTR GCA 90 bp | GCTCCTCTAGGTCACTACACCTCCACCCACAGTACTAACCAGAGCGCCAAGCCCGAGGCCCTGAGATCCTaGAGGAGTCATGTACACATT | + |
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Preference number: 4 (lower is better) Translates to: APLGHYTSTHSTNQSAKPEALRS*RSHVHI Trigger: AATGTGTACATGACTCCTGCAGGATCTCAGGGCCTC...GGGCTTGGCGCTCTGGTTAGTACTGTGGGTGGAGGTGTAGTGACCTAGAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CCA 90 bp | CCTCGGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGAGTGCCAGGGGCACAGTTaGGGAGTACAGGCGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PRIPPLLLSCASASHSSECQGHS*GVQAPV Trigger: CACTGGCGCCTGTACTCCCCAACTGTGCCCCTGGCA...CTCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCCGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
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| CDS-3UTR GCA 90 bp | GTCCACAAGGACATGAACCAGCTTCTTCTCCTTGCTCCTCTAGGTCACTACACCCACACTGTACTCGTGTaGCAGGGGCACAGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHKDMNQLLLLAPLGHYTHTVLV*QGHSWG Trigger: TCCCCAACTGTGCCCCTGGCACACGAGTACAGTGTG...GGTGTAGTGACCTAGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTTGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTGCTCCTCTAGGTCACTACACCTCCACCCACAGTACTAACCAGAGCGCCACAGGGTCATCCCTCTaGATGAGAAGGGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLAPLGHYTSTHSTNQSATGSSL*MRRGFC Trigger: ACAAAAGCCCCTTCTCATCCAGAGGGATGACCCTGT...GGCGCTCTGGTTAGTACTGTGGGTGGAGGTGTAGTGACCTAGAGGAGCAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGAGGAAGAGGCAGGTGGATTTGAGTTCGAGGCCAGCCTGGTCTACAGAGACAGGGTCATCCCTCTaGATGAGAAGGGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQRKRQVDLSSRPAWSTETGSSL*MRRGFC Trigger: ACAAAAGCCCCTTCTCATCCAGAGGGATGACCCTGT...CTCTGTAGACCAGGCTGGCCTCGAACTCAAATCCACCTGCCTCTTCCTCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
||
| 3UTR CAA 72 bp | GAATCACCCAGTCACAGCCCTGAAGCTACCTACCACTaGGAGAGACGTAGGCAGGAAGGGAAGATAACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESPSHSPEATYH*ERRRQEGKITG Trigger: TCCGGTTATCTTCCCTTCCTGCCTACGTCTCTCCAAGTGGTAGGTAGCTTCAGGGCTGTGACTGGGTGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTGCTCCTCTAGGTCACTACACCTCCACCCACAGTACTAACCAGAGCGCCAACATCATCATAATGTaGAGGGAGGCCCTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLAPLGHYTSTHSTNQSANIIIM*REALRS Trigger: GGATCTCAGGGCCTCCCTCCACATTATGATGATGTT...GGCGCTCTGGTTAGTACTGTGGGTGGAGGTGTAGTGACCTAGAGGAGCAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCTAGGTCACTACACCTCCACCCACAGTACTAACCAGAGCGCCAAGCCCTCTTCTCCTATCATGTaGATCTGCCTCACATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: APLGHYTSTHSTNQSAKPSSPIM*ICLTFF Trigger: GAAGAATGTGAGGCAGATGCACATGATAGGAGAAGA...GGGCTTGGCGCTCTGGTTAGTACTGTGGGTGGAGGTGTAGTGACCTAGAGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | GTCCACAAGGACATGAACCAGCTTCTTCTCCTTGCTCCTCTAGGTCACTACACCCATTCCAGCTTTTCCTaGATCCGCCACAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VHKDMNQLLLLAPLGHYTHSSFS*IRHSSS Trigger: GGATGAGCTGTGGCGGATCCAGGAAAAGCTGGAATG...GGTGTAGTGACCTAGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTTGTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | CACAAGGACATGAACCAGCTTCTTCTCCTTGCTCCTCTAGGTCACTACACCTCCCATTCCAGCTTTTCCTaGATCCGCCACAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HKDMNQLLLLAPLGHYTSHSSFS*IRHSSS Trigger: GGATGAGCTGTGGCGGATCCAGGAAAAGCTGGAATG...GGAGGTGTAGTGACCTAGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR TCA 90 bp | GTCCACAAGGACATGAACCAGCTTCTTCTCCTTGCTCCTCTAGGTCACTACACCAAGGCAGTCTCCCCATaGATTGTTCTGGTAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHKDMNQLLLLAPLGHYTKAVSP*IVLVGA Trigger: AGCACCTACCAGAACAATTCATGGGGAGACTGCCTT...GGTGTAGTGACCTAGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTTGTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | TCGGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGAGAACACACTGTACTCGTGTaGCAGGGGCACAGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDSSSSPIMCICLTFFREHTVLV*QGHSWG Trigger: TCCCCAACTGTGCCCCTGGCACACGAGTACAGTGTG...TTCTCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR CCA 90 bp | GTCCACAAGGACATGAACCAGCTTCTTCTCCTTGCTCCTCTAGGTCACTACACCACAGGGTCATCCCTCTaGATGAGAAGGGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VHKDMNQLLLLAPLGHYTTGSSL*MRRGFC Trigger: ACAAAAGCCCCTTCTCATCCAGAGGGATGACCCTGT...GGTGTAGTGACCTAGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTTGTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | AAGACGAGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCTGCCAGGGGCACAGTTaGGGAGTACAGGCGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTSQVTDIIFMTCVLQLCCQGHS*GVQAPV Trigger: CACTGGCGCCTGTACTCCCCAACTGTGCCCCTGGCA...GCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCTAGGTCACTACACCTCCACCCACAGTACTAACCAGAGCGCCAAGCCCGAAGAAAATGTGCTCTaGCGTCCTTATTTAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: APLGHYTSTHSTNQSAKPEENVL*RPYLKP Trigger: AGGTTTTAAATAAGGACGGCAGAGCACATTTTCTTC...GGGCTTGGCGCTCTGGTTAGTACTGTGGGTGGAGGTGTAGTGACCTAGAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | TCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCTGCCAGGGGCACAGTTaGGGAGTACAGGCGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SEVSFYQSLGCLIISWFSCQGHS*GVQAPV Trigger: CACTGGCGCCTGTACTCCCCAACTGTGCCCCTGGCA...GGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR TCA 90 bp | CAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTCTTAGAGTAGGCCAGGCCTaGAGGAGTTTCTGCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QTLGKTFFSWNTPRIPPLRVGQA*RSFCLM Trigger: CATCAGGCAGAAACTCCTTCAGGCCTGGCCTACTCT...AAGAGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR GCA 90 bp | GTCCACAAGGACATGAACCAGCTTCTTCTCCTTGCTCCTCTAGGTCACTACACCTTCGTTCCCTCCAGCTaGAGGATAAAAACCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VHKDMNQLLLLAPLGHYTFVPSS*RIKTST Trigger: TGTTGAGGTTTTTATCCTGCAGCTGGAGGGAACGAA...GGTGTAGTGACCTAGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTTGTGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTCTATTCTTAATATCTGGCACCACTGGGAAGCCAGGCCTTGGCTCTTGTCAGATCTGAGAGGCTaGACAGAGACTGGTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: WLSILNIWHHWEARPWLLSDLRG*TETGNI Trigger: AATATTACCAGTCTCTGTTCAGCCTCTCAGATCTGA...CAAGAGCCAAGGCCTGGCTTCCCAGTGGTGCCAGATATTAAGAATAGAGAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
||
| CDS-3UTR TCA 90 bp | CACAAGGACATGAACCAGCTTCTTCTCCTTGCTCCTCTAGGTCACTACACCTCCTCAGATCTGAGAGGCTaGACAGAGACTGGTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: HKDMNQLLLLAPLGHYTSSDLRG*TETGNI Trigger: AATATTACCAGTCTCTGTTCAGCCTCTCAGATCTGA...GGAGGTGTAGTGACCTAGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTTGTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | TCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCCACACTGTACTCGTGTaGCAGGGGCACAGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEVSFYQSLGCLIISWFSHTVLV*QGHSWG Trigger: TCCCCAACTGTGCCCCTGGCACACGAGTACAGTGTG...GGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGACGTTCTCATCCCCTGTaGGCTGCACTTTCTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLLLSCASASHSSENDRRSHPL*AALSLA Trigger: TGCCAAAGAAAGTGCAGCCCACAGGGGATGAGAACG...TCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR CCA 90 bp | GTCCACAAGGACATGAACCAGCTTCTTCTCCTTGCTCCTCTAGGTCACTACACCGATGAATGGTCCCTCTaGGAAAGTACAACAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHKDMNQLLLLAPLGHYTDEWSL*ESTTNL Trigger: GAGATTTGTTGTACTTTCCCAGAGGGACCATTCATC...GGTGTAGTGACCTAGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTTGTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR TCA 90 bp | CACCTCGGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGTCAGATCTGAGAGGCTaGACAGAGACTGGTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: HLGFLLFSYHVHLPHILQSDLRG*TETGNI Trigger: AATATTACCAGTCTCTGTTCAGCCTCTCAGATCTGA...CTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCCGAGGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
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| CDS-3UTR TCA 90 bp | AAGACGAGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCCTTCTTCTTCCCACTaGTGCTCCGGCAGACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTSQVTDIIFMTCVLQLCPSSSH*CSGRHS Trigger: TGAATGTCTGCCGGAGCATCAGTGGGAAGAAGAAGG...GCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTCAGAGTAGGCCAGGCCTaGAGGAGTTTCTGCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQVTDIIFMTCVLQLCLFRVGQA*RSFCLM Trigger: CATCAGGCAGAAACTCCTTCAGGCCTGGCCTACTCT...GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR TCA 90 bp | ATTGTCCCAGCCACAACCCAAACTCTAGGAAAGACATTTTTCAGCTGGAACACAAAGGCAGTCTCCCCATaGATTGTTCTGGTAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IVPATTQTLGKTFFSWNTKAVSP*IVLVGA Trigger: AGCACCTACCAGAACAATTCATGGGGAGACTGCCTT...TGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTGGGTTGTGGCTGGGACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
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| CDS-3UTR GCA 90 bp | CCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGAGAATGATAGAGAGGCCCTGAGATCCTaGAGGAGTCATGTACACATT | + |
|
Preference number: 4 (lower is better) Translates to: PPLLLSCASASHSSENDREALRS*RSHVHI Trigger: AATGTGTACATGACTCCTGCAGGATCTCAGGGCCTC...TCTATCATTCTCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTCTGTAGCTTTCTCATTTATCTTGGCTCTCCGGTCTTTGCATCTTCAAACCGTTCTCATCCCCTGTaGGCTGCACTTTCTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QFCSFLIYLGSPVFASSNRSHPL*AALSLA Trigger: TGCCAAAGAAAGTGCAGCCCACAGGGGATGAGAACG...GTTTGAAGATGCAAAGACCGGAGAGCCAAGATAAATGAGAAAGCTACAGAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
||
| CDS-3UTR GCA 90 bp | CACAAGGACATGAACCAGCTTCTTCTCCTTGCTCCTCTAGGTCACTACACCTCCGTGAAACTGAATTGTTaGCCTCTTCTGATCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: HKDMNQLLLLAPLGHYTSVKLNC*PLLIKI Trigger: GATTTTGATCAGAAGAGGGCAACAATTCAGTTTCAC...GGAGGTGTAGTGACCTAGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | AAGACGAGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCGAGGCCCTGAGATCCTaGAGGAGTCATGTACACATT | + |
|
Preference number: 4 (lower is better) Translates to: KTSQVTDIIFMTCVLQLCEALRS*RSHVHI Trigger: AATGTGTACATGACTCCTGCAGGATCTCAGGGCCTC...GCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | ACCCAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTTTCGTTCCCTCCAGCTaGAGGATAAAAACCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TQTLGKTFFSWNTPRIPPFVPSS*RIKTST Trigger: TGTTGAGGTTTTTATCCTGCAGCTGGAGGGAACGAA...AGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTCCGTTCTCATCCCCTGTaGGCTGCACTTTCTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQVTDIIFMTCVLQLCLFRSHPL*AALSLA Trigger: TGCCAAAGAAAGTGCAGCCCACAGGGGATGAGAACG...GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTCATCAATTCCCCACATAAAAAGCTCAGACTCCAACAACCGACTTTGAGTCATTCCAGCTTTTCCTaGATCCGCCACAGCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: KVINSPHKKLRLQQPTLSHSSFS*IRHSSS Trigger: GGATGAGCTGTGGCGGATCCAGGAAAAGCTGGAATG...ACTCAAAGTCGGTTGTTGGAGTCTGAGCTTTTTATGTGGGGAATTGATGACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR TCA 90 bp | AGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTGACATAATCTTTATGAGAGTAGGCCAGGCCTaGAGGAGTTTCTGCCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SYFFQRSKTSQVTDIIFMRVGQA*RSFCLM Trigger: CATCAGGCAGAAACTCCTTCAGGCCTGGCCTACTCT...CATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | TCGGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGAGAATGCCACATCTTCCTTTaGAATGTCAAATACGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SDSSSSPIMCICLTFFRECHIFL*NVKYEP Trigger: GGGTTCGTATTTGACATTGCAAAGGAAGATGTGGCA...TTCTCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR GCA 90 bp | CATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTTTGTTGAGCGATAAAGGCAGGCCTTaGATCAGGAACTGTCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HLPHILQRMIDVNHLLLSDKGRP*IRNCRT Trigger: TGTCCGACAGTTCCTGATGCAAGGCCTGCCTTTATC...GCTCAACAAAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR TCA 90 bp | CGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCTCGAGGGAGTCTGTGCTTaGCGAAGTCCTTCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: RSIVLSESGMPNNFLVFLEGVCA*RSPSSY Trigger: ATATGAAGAAGGACTTCGTCAAGCACAGACTCCCTC...GAGGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR TCA 90 bp | TCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCGAGGGAGTCTGTGCTTaGCGAAGTCCTTCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SEVSFYQSLGCLIISWFSEGVCA*RSPSSY Trigger: ATATGAAGAAGGACTTCGTCAAGCACAGACTCCCTC...GGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | AGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTGACATAATCTTTATGCGTTCTCATCCCCTGTaGGCTGCACTTTCTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYFFQRSKTSQVTDIIFMRSHPL*AALSLA Trigger: TGCCAAAGAAAGTGCAGCCCACAGGGGATGAGAACG...CATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | GAGAATGATAGATGTAAACCACCTTTTGTTGAGCTTCATCACAAGAGGAGGCTTAACATCATCATAATGTaGAGGGAGGCCCTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ENDRCKPPFVELHHKRRLNIIIM*REALRS Trigger: GGATCTCAGGGCCTCCCTCCACATTATGATGATGTT...AAGCCTCCTCTTGTGATGAAGCTCAACAAAAGGTGGTTTACATCTATCATTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTCAACATCATCATAATGTaGAGGGAGGCCCTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SQVTDIIFMTCVLQLCLFNIIIM*REALRS Trigger: GGATCTCAGGGCCTCCCTCCACATTATGATGATGTT...GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTCTAGGAAAGACATTTTTCAGCTGGAACACACCTCGGATTCCTCCTCTTGATGAATGGTCCCTCTaGGAAAGTACAACAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTLGKTFFSWNTPRIPPLDEWSL*ESTTNL Trigger: GAGATTTGTTGTACTTTCCCAGAGGGACCATTCATC...AAGAGGAGGAATCCGAGGTGTGTTCCAGCTGAAAAATGTCTTTCCTAGAGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR CCA 90 bp | TCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCCCTTGTTACATCAGCTaGGGTTTCCACATTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEVSFYQSLGCLIISWFSPCYIS*GFHIQE Trigger: CTCCTGAATGTGGAAACCCCAGCTGATGTAACAAGG...GGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTCTGTAGCTTTCTCATTTATCTTGGCTCTCCGGTCTTTGCATCTTCAAACCTGAGAATTCTGCCCTaGGGAAATCCACTACCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QFCSFLIYLGSPVFASSNLRILP*GNPLPY Trigger: ATAAGGTAGTGGATTTCCCCAGGGCAGAATTCTCAG...GTTTGAAGATGCAAAGACCGGAGAGCCAAGATAAATGAGAAAGCTACAGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
||
| CDS-3UTR CCA 90 bp | TCACATTCTTCAGAGAATGATAGATGTAAACCACCTTTTGTTGAGCTTCATCACACAGGGTCATCCCTCTaGATGAGAAGGGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSENDRCKPPFVELHHTGSSL*MRRGFC Trigger: ACAAAAGCCCCTTCTCATCCAGAGGGATGACCCTGT...GTGATGAAGCTCAACAAAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR CCA 90 bp | AAGACGAGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCGATGAATGGTCCCTCTaGGAAAGTACAACAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTSQVTDIIFMTCVLQLCDEWSL*ESTTNL Trigger: GAGATTTGTTGTACTTTCCCAGAGGGACCATTCATC...GCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CCA 90 bp | TTTCAGTCAAAAGTAATTGTCCCAGCCACAACCCAAACTCTAGGAAAGACATTTCCTTGTTACATCAGCTaGGGTTTCCACATTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FQSKVIVPATTQTLGKTFPCYIS*GFHIQE Trigger: CTCCTGAATGTGGAAACCCCAGCTGATGTAACAAGG...AAATGTCTTTCCTAGAGTTTGGGTTGTGGCTGGGACAATTACTTTTGACTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR TCA 90 bp | AATAAACTTGTCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCAAGGCAGTCTCCCCATaGATTGTTCTGGTAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKLVRSIVLSESGMPNNFKAVSP*IVLVGA Trigger: AGCACCTACCAGAACAATTCATGGGGAGACTGCCTT...GAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGACAAGTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR TCA 90 bp | TCACATTCTTCAGAGAATGATAGATGTAAACCACCTTTTGTTGAGCTTCATCACGAGGGAGTCTGTGCTTaGCGAAGTCCTTCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSENDRCKPPFVELHHEGVCA*RSPSSY Trigger: ATATGAAGAAGGACTTCGTCAAGCACAGACTCCCTC...GTGATGAAGCTCAACAAAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR TCA 90 bp | TCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCACTGTGAGGACAATGTaGTCTTTGAACTGCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEVSFYQSLGCLIISWFSTVRTM*SLNCSL Trigger: AAGACTGCAGTTCAAAGATCACATTGTCCTCACAGT...GGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | TCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCTGCCACATCTTCCTTTaGAATGTCAAATACGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SEVSFYQSLGCLIISWFSCHIFL*NVKYEP Trigger: GGGTTCGTATTTGACATTGCAAAGGAAGATGTGGCA...GGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR GCA 90 bp | CGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCTCCCTATCATGTGCATCTaGCTCACATTCTTCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSIVLSESGMPNNFLVFLPIMCI*LTFFRE Trigger: TTCTCTGAAGAATGTGAGGCAGATGCACATGATAGG...GAGGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTCTCTTCTCCTATCATGTaGATCTGCCTCACATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQVTDIIFMTCVLQLCLFSSPIM*ICLTFF Trigger: GAAGAATGTGAGGCAGATGCACATGATAGGAGAAGA...GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | CATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTCTACAACACTGCATTCCTTGTTACATCAGCTaGGGTTTCCACATTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HNLYDMCTAVVPFLQHCIPCYIS*GFHIQE Trigger: CTCCTGAATGTGGAAACCCCAGCTGATGTAACAAGG...AATGCAGTGTTGTAGAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTCTGTAGCTTTCTCATTTATCTTGGCTCTCCGGTCTTTGCATCTTCAAACGAAGAAAATGTGCTCTaGCGTCCTTATTTAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: QFCSFLIYLGSPVFASSNEENVL*RPYLKP Trigger: AGGTTTTAAATAAGGACGGCAGAGCACATTTTCTTC...GTTTGAAGATGCAAAGACCGGAGAGCCAAGATAAATGAGAAAGCTACAGAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
||
| CDS-3UTR GCA 90 bp | CATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTCTACAACACTGCATTTTCGTTCCCTCCAGCTaGAGGATAAAAACCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HNLYDMCTAVVPFLQHCIFVPSS*RIKTST Trigger: TGTTGAGGTTTTTATCCTGCAGCTGGAGGGAACGAA...AATGCAGTGTTGTAGAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTCAAATGGATTCTTATCTaGCCCTACTGTGAGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQVTDIIFMTCVLQLCLFKWILI*PYCEDN Trigger: ATTGTCCTCACAGTAGGGCCAGATAAGAATCCATTT...GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTCTTGAGCTTCATCAAATaGATTCTTATCTGGCCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SQVTDIIFMTCVLQLCLFLSFIK*ILIWPY Trigger: GTAGGGCCAGATAAGAATCCATTTGATGAAGCTCAA...GAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR TCA 90 bp | TCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCGGACAATGTGATCTTTaGACTGCAGTCTTATTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SEVSFYQSLGCLIISWFSGQCDL*TAVLLC Trigger: ACATAATAAGACTGCAGTTCAAAGATCACATTGTCC...GGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR TCA 90 bp | AGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTGACATAATCTTTATGACTGTGAGGACAATGTaGTCTTTGAACTGCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SYFFQRSKTSQVTDIIFMTVRTM*SLNCSL Trigger: AAGACTGCAGTTCAAAGATCACATTGTCCTCACAGT...CATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | AAAGTCATCAATTCCCCACATAAAAAGCTCAGACTCCAACAACCGACTTTGAGTGAAGAAAATGTGCTCTaGCGTCCTTATTTAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: KVINSPHKKLRLQQPTLSEENVL*RPYLKP Trigger: AGGTTTTAAATAAGGACGGCAGAGCACATTTTCTTC...ACTCAAAGTCGGTTGTTGGAGTCTGAGCTTTTTATGTGGGGAATTGATGACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS-3UTR GCA 90 bp | ATAAACTTGTCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGCCACATCTTCCTTTaGAATGTCAAATACGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: INLSEVSFYQSLGCLIISCHIFL*NVKYEP Trigger: GGGTTCGTATTTGACATTGCAAAGGAAGATGTGGCA...GGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGACAAGTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | AGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTGACATAATCTTTATGCCTATCATGTGCATCTaGCTCACATTCTTCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SYFFQRSKTSQVTDIIFMPIMCI*LTFFRE Trigger: TTCTCTGAAGAATGTGAGGCAGATGCACATGATAGG...CATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR TCA 90 bp | AATAAACTTGTCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCTCAGATCTGAGAGGCTaGACAGAGACTGGTAATATT | + |
|
Preference number: 4 (lower is better) Translates to: NKLVRSIVLSESGMPNNFSDLRG*TETGNI Trigger: AATATTACCAGTCTCTGTTCAGCCTCTCAGATCTGA...GAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGACAAGTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CCA 90 bp | TCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCTTTCGAAGAAACTACTaGGGCTGTCAAAGTTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: SEVSFYQSLGCLIISWFSFRRNY*GCQSLI Trigger: TATTAAACTTTGACAGCCCCAGTAGTTTCTTCGAAA...GGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CCA 90 bp | ATAAACTTGTCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCAAATGGATTCTTATCTaGCCCTACTGTGAGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: INLSEVSFYQSLGCLIISKWILI*PYCEDN Trigger: ATTGTCCTCACAGTAGGGCCAGATAAGAATCCATTT...GGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGACAAGTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CCA 90 bp | AGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTGACATAATCTTTATGTTGAGCTTCATCAAATaGATTCTTATCTGGCCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SYFFQRSKTSQVTDIIFMLSFIK*ILIWPY Trigger: GTAGGGCCAGATAAGAATCCATTTGATGAAGCTCAA...CATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR GCA 90 bp | AGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTGACATAATCTTTATGGAAGAAAATGTGCTCTaGCGTCCTTATTTAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SYFFQRSKTSQVTDIIFMEENVL*RPYLKP Trigger: AGGTTTTAAATAAGGACGGCAGAGCACATTTTCTTC...CATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR TCA 90 bp | AATAAACTTGTCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCGGACAATGTGATCTTTaGACTGCAGTCTTATTATGT | + |
|
Preference number: 4 (lower is better) Translates to: NKLVRSIVLSESGMPNNFGQCDL*TAVLLC Trigger: ACATAATAAGACTGCAGTTCAAAGATCACATTGTCC...GAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGACAAGTTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| 3UTR CAA 72 bp | ATGGCCTTTATCACACTTTCTATAAGGTCACAGCTATaGTGTTTTAAAGCTGCTATCAATACATCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: MAFITLSIRSQL*CFKAAINTSFT Trigger: TGTGAAGGATGTATTGATAGCAGCTTTAAAACACAATAGCTGTGACCTTATAGAAAGTGTGATAAAGGCCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
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| CDS-3UTR CAA 90 bp | GCTCCTCTAGGTCACTACACCTCCACCCACAGTACTAACCAGAGCGCCAAGCCCGTGCCAGGGGCACAGTaGGGGAGTACAGGCGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: APLGHYTSTHSTNQSAKPVPGAQ*GSTGAS Trigger: ACTGGCGCCTGTACTCCCCAACTGTGCCCCTGGCAC...GGGCTTGGCGCTCTGGTTAGTACTGTGGGTGGAGGTGTAGTGACCTAGAGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS GCA 90 bp | TGTCGGTGTGCCGATCCGGTCCTCAGATTCCACACTGTACTCGTGTaGCAGGGGCACAGTTGGGGAGTACAGGCGCCAGTGTTTCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CRCADPVLRFHTVLV*QGHSWGVQAPVFRS Trigger: GGAACGAAACACTGGCGCCTGTACTCCCCAACTGTGCCCCTGGCACACGAGTACAGTGTGGAATCTGAGGACCGGATCGGCACACCGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS CCA 90 bp | CCGGTCCTCAGATTCCACACTGTACTCGTGTGCCAGGGGCACAGTTaGGGAGTACAGGCGCCAGTGTTTCGTTCCCTCCAGCTGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PVLRFHTVLVCQGHS*GVQAPVFRSLQLQD Trigger: ATCCTGCAGCTGGAGGGAACGAAACACTGGCGCCTGTACTCCCCAACTGTGCCCCTGGCACACGAGTACAGTGTGGAATCTGAGGACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS-3UTR CAA 90 bp | TCGGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGAGAAGTGCCAGGGGCACAGTaGGGGAGTACAGGCGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SDSSSSPIMCICLTFFREVPGAQ*GSTGAS Trigger: ACTGGCGCCTGTACTCCCCAACTGTGCCCCTGGCAC...TTCTCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
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| CDS GCA 90 bp | AGTTTAATACAGAAAGCGTTTCAGGCAGCTCCTCCTTCACCCGCTTaGAAGGAACAGACGCTTCTTCGTTCTCATCCCCTGTGGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLIQKAFQAAPPSPA*KEQTLLRSHPLWAA Trigger: TGCAGCCCACAGGGGATGAGAACGAAGAAGCGTCTGTTCCTTGCAAGCGGGTGAAGGAGGAGCTGCCTGAAACGCTTTCTGTATTAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023407.12 ENSMUST00000120667.2 ENSMUST00000120674.8 ENSMUST00000138324.2 ENSMUST00000160571.2 |
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| CDS-3UTR CAA 90 bp | GCTCCTCTAGGTCACTACACCTCCACCCACAGTACTAACCAGAGCGCCAAGCCCGTTGGTGAAACTGAATaGTTGCCCTCTTCTGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: APLGHYTSTHSTNQSAKPVGETE*LPSSDQ Trigger: TTGATCAGAAGAGGGCAACAATTCAGTTTCACCAAC...GGGCTTGGCGCTCTGGTTAGTACTGTGGGTGGAGGTGTAGTGACCTAGAGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTTGCTCCTCTAGGTCACTACACCTCCACCCACAGTACTAACCAGAGCGCCTTATGTTGTCCAACCTaGGCAACTGTTTACCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLAPLGHYTSTHSTNQSALCCPT*ATVYLG Trigger: ACCCAGGTAAACAGTTGCCAAGGTTGGACAACATAA...GGCGCTCTGGTTAGTACTGTGGGTGGAGGTGTAGTGACCTAGAGGAGCAAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CAA 90 bp | GCTCCTCTAGGTCACTACACCTCCACCCACAGTACTAACCAGAGCGCCAAGCCCGGTGAAACTGAATTGTaGCCCTCTTCTGATCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: APLGHYTSTHSTNQSAKPGETEL*PSSDQN Trigger: ATTTTGATCAGAAGAGGGCAACAATTCAGTTTCACC...GGGCTTGGCGCTCTGGTTAGTACTGTGGGTGGAGGTGTAGTGACCTAGAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS TCA 90 bp | TCGTCTCCGTTCCATTTCCCTCGAAGAAAGGAGGGAGTCTGTGCTTaGCGAAGTCCTTCTTCATATCTGATGACAGCAGCTCTTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSPFHFPRRKEGVCA*RSPSSYLMTAALLC Trigger: GCAGAGAAGAGCTGCTGTCATCAGATATGAAGAAGGACTTCGTCAAGCACAGACTCCCTCCTTTCTTCGAGGGAAATGGAACGGAGACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS TCA 90 bp | GTTCTGGTAGGTGCTAATAGTCAGGTGAATAGAGTAGGCCAGGCCTaGAGGAGTTTCTGCCTGATGAATGGTCCCTCTGGGAAAGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: VLVGANSQVNRVGQA*RSFCLMNGPSGKVQ Trigger: TTGTACTTTCCCAGAGGGACCATTCATCAGGCAGAAACTCCTTCAGGCCTGGCCTACTCTATTCACCTGACTATTAGCACCTACCAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS GCA 90 bp | TCCATCGTCTCCGTTCCATTTCCCTCGAAGAAAGGAGGGAGTCTGTaGTTGACGAAGTCCTTCTTCATATCTGATGACAGCAGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIVSVPFPSKKGGSL*LTKSFFISDDSSSS Trigger: AGAAGAGCTGCTGTCATCAGATATGAAGAAGGACTTCGTCAAGCACAGACTCCCTCCTTTCTTCGAGGGAAATGGAACGGAGACGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS-3UTR CAA 90 bp | AGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTGACATAATCTTTATGGTGCCAGGGGCACAGTaGGGGAGTACAGGCGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SYFFQRSKTSQVTDIIFMVPGAQ*GSTGAS Trigger: ACTGGCGCCTGTACTCCCCAACTGTGCCCCTGGCAC...CATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTTGCTCCTCTAGGTCACTACACCTCCACCCACAGTACTAACCAGAGCGCCGTAAACCACCTTTTGTaGAGCTTCATCAAATGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LLAPLGHYTSTHSTNQSAVNHLL*SFIKWI Trigger: AATCCATTTGATGAAGCTCAACAAAAGGTGGTTTAC...GGCGCTCTGGTTAGTACTGTGGGTGGAGGTGTAGTGACCTAGAGGAGCAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CAA 90 bp | GTTAGTCCTGGGAGACAGGTGTGTGGAACAGTTGGATCCCTAGAGCTCACTGACGGTGAAACTGAATTGTaGCCCTCTTCTGATCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSPGRQVCGTVGSLELTDGETEL*PSSDQN Trigger: ATTTTGATCAGAAGAGGGCAACAATTCAGTTTCACC...GTCAGTGAGCTCTAGGGATCCAACTGTTCCACACACCTGTCTCCCAGGACTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTCTCTATTCTTAATATCTGGCACCACTGGGAAGCCAGGCCTTGGCTCTTGGTTGGTGAAACTGAATaGTTGCCCTCTTCTGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: WLSILNIWHHWEARPWLLVGETE*LPSSDQ Trigger: TTGATCAGAAGAGGGCAACAATTCAGTTTCACCAAC...CAAGAGCCAAGGCCTGGCTTCCCAGTGGTGCCAGATATTAAGAATAGAGAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
||
| CDS TCA 90 bp | GTCTCTTCCATAGTACACTCCTTTCTTGCAGAGTCTCTTCAGATCTaGGAGGCTGAACAGAGACTGGTAATATTTGGCCAGTACAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSSIVHSFLAESLQI*EAEQRLVIFGQYRV Trigger: GACCCTGTACTGGCCAAATATTACCAGTCTCTGTTCAGCCTCTCAGATCTGAAGAGACTCTGCAAGAAAGGAGTGTACTATGGAAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023407.12 ENSMUST00000120667.2 ENSMUST00000120674.8 ENSMUST00000160571.2 |
||
| CDS-3UTR CAA 90 bp | GTCCACAAGGACATGAACCAGCTTCTTCTCCTTGCTCCTCTAGGTCACTACACCCTTATATCTCTGAGGTaGGTGAAACTGAATTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VHKDMNQLLLLAPLGHYTLISLR*VKLNCC Trigger: GCAACAATTCAGTTTCACCAACCTCAGAGATATAAG...GGTGTAGTGACCTAGAGGAGCAAGGAGAAGAAGCTGGTTCATGTCCTTGTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS-3UTR CAA 90 bp | CACCTCGGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGATGCCACATCTTCCTTaGCAATGTCAAATACGAACC | + |
|
Preference number: 5 (lower is better) Translates to: HLGFLLFSYHVHLPHILQMPHLP*QCQIRT Trigger: GGTTCGTATTTGACATTGCAAAGGAAGATGTGGCAT...CTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCCGAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
||
| CDS TCA 90 bp | GAAAATGTGCTCTGCCGTCCTTATTTAAAACCTTCTTCTTCCCACTaGTGCTCCGGCAGACATTCACGTCTCTTCCATAGTACACTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ENVLCRPYLKPSSSH*CSGRHSRLFHSTLL Trigger: AAGGAGTGTACTATGGAAGAGACGTGAATGTCTGCCGGAGCATCAGTGGGAAGAAGAAGGTTTTAAATAAGGACGGCAGAGCACATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023407.12 ENSMUST00000120667.2 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS GCA 90 bp | TCAAGTTTCAGGTCCTTAACACGAATTGGTGACCCGCACCAGATTTaGTTCAGAGCATCCACATGTGATAAAGGAAAGCGAAGACCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSFRSLTRIGDPHQI*FRASTCDKGKRRPK Trigger: TTTCGGTCTTCGCTTTCCTTTATCACATGTGGATGCTCTGAAGCAAATCTGGTGCGGGTCACCAATTCGTGTTAAGGACCTGAAACTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS CCA 90 bp | GACAATGTGATCTTTGAACTGCAGTCTTATTATGTTGTCCAACCTTaGCAACTGTTTACCTGGGTCCATCGTCTCCGTTCCATTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DNVIFELQSYYVVQP*QLFTWVHRLRSISL Trigger: GAGGGAAATGGAACGGAGACGATGGACCCAGGTAAACAGTTGCCAAGGTTGGACAACATAATAAGACTGCAGTTCAAAGATCACATTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CAA 90 bp | TGTTGGATGAAGTTCAGTGACTGTGCTGGCTTTACTGAGAAGAGGACGCTATCTGATGAGAAGGGGCTTTaGTTCCCAGAATTCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CWMKFSDCAGFTEKRTLSDEKGL*FPEFLE Trigger: TTCAAGGAATTCTGGGAACAAAAGCCCCTTCTCATC...AGATAGCGTCCTCTTCTCAGTAAAGCCAGCACAGTCACTGAACTTCATCCAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| CDS-3UTR CAA 90 bp | GGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGAGAATGGATGAGAAGGGGCTTTaGTTCCCAGAATTCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GFLLFSYHVHLPHILQRMDEKGL*FPEFLE Trigger: TTCAAGGAATTCTGGGAACAAAAGCCCCTTCTCATC...CATTCTCTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
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| CDS-3UTR CAA 90 bp | CACCTCGGATTCCTCCTCTTCTCCTATCATGTGCATCTGCCTCACATTCTTCAGCTTATATCTCTGAGGTaGGTGAAACTGAATTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HLGFLLFSYHVHLPHILQLISLR*VKLNCC Trigger: GCAACAATTCAGTTTCACCAACCTCAGAGATATAAG...CTGAAGAATGTGAGGCAGATGCACATGATAGGAGAAGAGGAGGAATCCGAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
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| CDS-3UTR CAA 90 bp | AAGACGAGCCAGGTTACTGACATAATCTTTATGACATGTGTACTGCAGTTGTGCGATGAGAAGGGGCTTTaGTTCCCAGAATTCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KTSQVTDIIFMTCVLQLCDEKGL*FPEFLE Trigger: TTCAAGGAATTCTGGGAACAAAAGCCCCTTCTCATC...GCACAACTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS TCA 90 bp | GCTTCATCAAATGGATTCTTATCTGGCCCTACTGTGAGGACAATGTaGTCTTTGAACTGCAGTCTTATTATGTTGTCCAACCTTGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASSNGFLSGPTVRTM*SLNCSLIMLSNLGN Trigger: GTTGCCAAGGTTGGACAACATAATAAGACTGCAGTTCAAAGATCACATTGTCCTCACAGTAGGGCCAGATAAGAATCCATTTGATGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CAA 90 bp | GAGAATGATAGATGTAAACCACCTTTTGTTGAGCTTCATCACAAGAGGAGGCTTGTTGGTGAAACTGAATaGTTGCCCTCTTCTGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: ENDRCKPPFVELHHKRRLVGETE*LPSSDQ Trigger: TTGATCAGAAGAGGGCAACAATTCAGTTTCACCAAC...AAGCCTCCTCTTGTGATGAAGCTCAACAAAAGGTGGTTTACATCTATCATTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120674.8 |
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| CDS-3UTR CAA 90 bp | CGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCTCGTTGGTGAAACTGAATaGTTGCCCTCTTCTGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: RSIVLSESGMPNNFLVFLVGETE*LPSSDQ Trigger: TTGATCAGAAGAGGGCAACAATTCAGTTTCACCAAC...GAGGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CAA 90 bp | CGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCTCATGCCACATCTTCCTTaGCAATGTCAAATACGAACC | + |
|
Preference number: 5 (lower is better) Translates to: RSIVLSESGMPNNFLVFLMPHLP*QCQIRT Trigger: GGTTCGTATTTGACATTGCAAAGGAAGATGTGGCAT...GAGGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CAA 90 bp | ATCACAATGATCTCCATCATCAAACCAGACATTCAATCTGAAACTGACGTGTGCCTTATATCTCTGAGGTaGGTGAAACTGAATTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ITMISIIKPDIQSETDVCLISLR*VKLNCC Trigger: GCAACAATTCAGTTTCACCAACCTCAGAGATATAAG...GCACACGTCAGTTTCAGATTGAATGTCTGGTTTGATGATGGAGATCATTGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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| CDS-3UTR CAA 90 bp | AGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTGACATAATCTTTATGTTATGTTGTCCAACCTaGGCAACTGTTTACCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SYFFQRSKTSQVTDIIFMLCCPT*ATVYLG Trigger: ACCCAGGTAAACAGTTGCCAAGGTTGGACAACATAA...CATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CAA 90 bp | CGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCTCGATGTAAACCACCTTTaGTTGAGCTTCATCAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: RSIVLSESGMPNNFLVFLDVNHL*LSFIKW Trigger: CCATTTGATGAAGCTCAACAAAAGGTGGTTTACATC...GAGGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CAA 90 bp | CATAATCTTTATGACATGTGTACTGCAGTTGTGCCTTTTCTACAACACTGCATTATGCCACATCTTCCTTaGCAATGTCAAATACGAACC | + |
|
Preference number: 5 (lower is better) Translates to: HNLYDMCTAVVPFLQHCIMPHLP*QCQIRT Trigger: GGTTCGTATTTGACATTGCAAAGGAAGATGTGGCAT...AATGCAGTGTTGTAGAAAAGGCACAACTGCAGTACACATGTCATAAAGATTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CAA 90 bp | CGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCTGGTTTTCCTCGTAAACCACCTTTTGTaGAGCTTCATCAAATGGATT | + |
|
Preference number: 5 (lower is better) Translates to: RSIVLSESGMPNNFLVFLVNHLL*SFIKWI Trigger: AATCCATTTGATGAAGCTCAACAAAAGGTGGTTTAC...GAGGAAAACCAGGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CAA 90 bp | AGTTATTTCTTCCAAAGAAGCAAGACGAGCCAGGTTACTGACATAATCTTTATGCTTATATCTCTGAGGTaGGTGAAACTGAATTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SYFFQRSKTSQVTDIIFMLISLR*VKLNCC Trigger: GCAACAATTCAGTTTCACCAACCTCAGAGATATAAG...CATAAAGATTATGTCAGTAACCTGGCTCGTCTTGCTTCTTTGGAAGAAATAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS-3UTR CAA 90 bp | ATAAACTTGTCCGAAGTATCGTTTTATCAGAGTCTGGGATGCCTAATAATTTCCGATGTAAACCACCTTTaGTTGAGCTTCATCAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: INLSEVSFYQSLGCLIISDVNHL*LSFIKW Trigger: CCATTTGATGAAGCTCAACAAAAGGTGGTTTACATC...GGAAATTATTAGGCATCCCAGACTCTGATAAAACGATACTTCGGACAAGTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS GCA 72 bp | GCCGATCCGGTCCTCAGATTCCACACTGTACTCGTGTaGCAGGGGCACAGTTGGGGAGTACAGGCGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ADPVLRFHTVLV*QGHSWGVQAPV Trigger: CACTGGCGCCTGTACTCCCCAACTGTGCCCCTGGCACACGAGTACAGTGTGGAATCTGAGGACCGGATCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS CAA 90 bp | TCCGGTCCTCAGATTCCACACTGTACTCGTGTGCCAGGGGCACAGTaGGGGAGTACAGGCGCCAGTGTTTCGTTCCCTCCAGCTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGPQIPHCTRVPGAQ*GSTGASVSFPPAAG Trigger: TCCTGCAGCTGGAGGGAACGAAACACTGGCGCCTGTACTCCCCAACTGTGCCCCTGGCACACGAGTACAGTGTGGAATCTGAGGACCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS CCA 72 bp | AGATTCCACACTGTACTCGTGTGCCAGGGGCACAGTTaGGGAGTACAGGCGCCAGTGTTTCGTTCCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RFHTVLVCQGHS*GVQAPVFRSLQ Trigger: CTGGAGGGAACGAAACACTGGCGCCTGTACTCCCCAACTGTGCCCCTGGCACACGAGTACAGTGTGGAATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS CAA 72 bp | CAGATTCCACACTGTACTCGTGTGCCAGGGGCACAGTaGGGGAGTACAGGCGCCAGTGTTTCGTTCCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QIPHCTRVPGAQ*GSTGASVSFPP Trigger: TGGAGGGAACGAAACACTGGCGCCTGTACTCCCCAACTGTGCCCCTGGCACACGAGTACAGTGTGGAATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS GCA 72 bp | CAGAAAGCGTTTCAGGCAGCTCCTCCTTCACCCGCTTaGAAGGAACAGACGCTTCTTCGTTCTCATCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QKAFQAAPPSPA*KEQTLLRSHPL Trigger: CAGGGGATGAGAACGAAGAAGCGTCTGTTCCTTGCAAGCGGGTGAAGGAGGAGCTGCCTGAAACGCTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023407.12 ENSMUST00000120667.2 ENSMUST00000120674.8 ENSMUST00000138324.2 ENSMUST00000160571.2 |
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| CDS CCA 72 bp | CCTCAGAAAGCCACTCAACTTCCTTGTTACATCAGCTaGGGTTTCCACATTCAGGAGCATCCGCCGGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PQKATQLPCYIS*GFHIQEHPPGH Trigger: ATGCCCCGGCGGATGCTCCTGAATGTGGAAACCCCAGCTGATGTAACAAGGAAGTTGAGTGGCTTTCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS CAA 72 bp | ACAGAAAGCGTTTCAGGCAGCTCCTCCTTCACCCGCTaGCAAGGAACAGACGCTTCTTCGTTCTCATCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TESVSGSSSFTR*QGTDASSFSSP Trigger: AGGGGATGAGAACGAAGAAGCGTCTGTTCCTTGCAAGCGGGTGAAGGAGGAGCTGCCTGAAACGCTTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023407.12 ENSMUST00000120667.2 ENSMUST00000120674.8 ENSMUST00000138324.2 ENSMUST00000160571.2 |
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| CDS TCA 72 bp | GGTGCTAATAGTCAGGTGAATAGAGTAGGCCAGGCCTaGAGGAGTTTCTGCCTGATGAATGGTCCCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GANSQVNRVGQA*RSFCLMNGPSG Trigger: CCCAGAGGGACCATTCATCAGGCAGAAACTCCTTCAGGCCTGGCCTACTCTATTCACCTGACTATTAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS CAA 90 bp | AAGTTTAATACAGAAAGCGTTTCAGGCAGCTCCTCCTTCACCCGCTaGCAAGGAACAGACGCTTCTTCGTTCTCATCCCCTGTGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KFNTESVSGSSSFTR*QGTDASSFSSPVGC Trigger: GCAGCCCACAGGGGATGAGAACGAAGAAGCGTCTGTTCCTTGCAAGCGGGTGAAGGAGGAGCTGCCTGAAACGCTTTCTGTATTAAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023407.12 ENSMUST00000120667.2 ENSMUST00000120674.8 ENSMUST00000138324.2 ENSMUST00000160571.2 |
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| CDS GCA 72 bp | AGTCCTTCTTCATATCTGATGACAGCAGCTCTTCTCTaGCCTCGAGCTGGTCTGCAAGAGTCCTCAGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPSSYLMTAALL*PRAGLQESSES Trigger: GCTTTCTGAGGACTCTTGCAGACCAGCTCGAGGGCAGAGAAGAGCTGCTGTCATCAGATATGAAGAAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS CCA 72 bp | ATATCTGATGACAGCAGCTCTTCTCTGCCCTCGAGCTaGTCTGCAAGAGTCCTCAGAAAGCCACTCAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISDDSSSSLPSS*SARVLRKPLNF Trigger: GAAGTTGAGTGGCTTTCTGAGGACTCTTGCAGACCAGCTCGAGGGCAGAGAAGAGCTGCTGTCATCAGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS CAA 90 bp | ATCGTCTCCGTTCCATTTCCCTCGAAGAAAGGAGGGAGTCTGTGCTaGACGAAGTCCTTCTTCATATCTGATGACAGCAGCTCTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: IVSVPFPSKKGGSLC*TKSFFISDDSSSSL Trigger: CAGAGAAGAGCTGCTGTCATCAGATATGAAGAAGGACTTCGTCAAGCACAGACTCCCTCCTTTCTTCGAGGGAAATGGAACGGAGACGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS CCA 72 bp | CAGCTGCAGGATAAAAACCTCAACATCATCATAATGTaGAGGGAGGCCCTGAGATCCTGCAGGAGTCATGTA | + |
|
Preference number: 6 (lower is better) Translates to: QLQDKNLNIIIM*REALRSCRSHV Trigger: TACATGACTCCTGCAGGATCTCAGGGCCTCCCTCCACATTATGATGATGTTGAGGTTTTTATCCTGCAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS CAA 72 bp | GCCGGGGCATTCCACTCCTTAATGCCACATCTTCCTTaGCAATGTCAAATACGAACCCCGAAATGGAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGAFHSLMPHLP*QCQIRTPKWNP Trigger: TGGATTCCATTTCGGGGTTCGTATTTGACATTGCAAAGGAAGATGTGGCATTAAGGAGTGGAATGCCCCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS CAA 72 bp | GTTCCATTTCCCTCGAAGAAAGGAGGGAGTCTGTGCTaGACGAAGTCCTTCTTCATATCTGATGACAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VPFPSKKGGSLC*TKSFFISDDSS Trigger: GCTGCTGTCATCAGATATGAAGAAGGACTTCGTCAAGCACAGACTCCCTCCTTTCTTCGAGGGAAATGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS TCA 72 bp | CTCTGCCGTCCTTATTTAAAACCTTCTTCTTCCCACTaGTGCTCCGGCAGACATTCACGTCTCTTCCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: LCRPYLKPSSSH*CSGRHSRLFHS Trigger: ACTATGGAAGAGACGTGAATGTCTGCCGGAGCATCAGTGGGAAGAAGAAGGTTTTAAATAAGGACGGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023407.12 ENSMUST00000120667.2 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS TCA 72 bp | TTCCATTTCCCTCGAAGAAAGGAGGGAGTCTGTGCTTaGCGAAGTCCTTCTTCATATCTGATGACAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FHFPRRKEGVCA*RSPSSYLMTAA Trigger: AGCTGCTGTCATCAGATATGAAGAAGGACTTCGTCAAGCACAGACTCCCTCCTTTCTTCGAGGGAAATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
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| CDS TCA 72 bp | ATCTGTGTCAAGTTTCAGGTCCTTAACACGAATTGGTaGCCCGCACCAGATTTGCTTCAGAGCATCCACATG | + |
|
Preference number: 6 (lower is better) Translates to: ICVKFQVLNTNW*PAPDLLQSIHM Trigger: CATGTGGATGCTCTGAAGCAAATCTGGTGCGGGTCACCAATTCGTGTTAAGGACCTGAAACTTGACACAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS CCA 72 bp | TCTTATTATGTTGTCCAACCTTGGCAACTGTTTACCTaGGTCCATCGTCTCCGTTCCATTTCCCTCGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SYYVVQPWQLFT*VHRLRSISLEE Trigger: TTCTTCGAGGGAAATGGAACGGAGACGATGGACCCAGGTAAACAGTTGCCAAGGTTGGACAACATAATAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
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| CDS CAA 72 bp | CTGGATCCGCCACAGCTCATCCTTATATCTCTGAGGTaGGTGAAACTGAATTGTTGCCCTCTTCTGATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LDPPQLILISLR*VKLNCCPLLIK Trigger: TTTGATCAGAAGAGGGCAACAATTCAGTTTCACCAACCTCAGAGATATAAGGATGAGCTGTGGCGGATCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
||
| CDS CAA 72 bp | TGCCCTGGGGAAATCCACTACCTTATATCTCTGAGGTaGGTGAAACTGAATTGTTGCCCTCTTCTGATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: CPGEIHYLISLR*VKLNCCPLLIK Trigger: TTTGATCAGAAGAGGGCAACAATTCAGTTTCACCAACCTCAGAGATATAAGGTAGTGGATTTCCCCAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
||
| CDS CAA 90 bp | CTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTTTGTaGAGCTTCATCAAATGGATTCTTATCTGGCCCTACTGTGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LPHILQRMIDVNHLL*SFIKWILIWPYCED Trigger: GTCCTCACAGTAGGGCCAGATAAGAATCCATTTGATGAAGCTCAACAAAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS CCA 72 bp | CACCTTTTGTTGAGCTTCATCAAATGGATTCTTATCTaGCCCTACTGTGAGGACAATGTGATCTTTGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: HLLLSFIKWILI*PYCEDNVIFEL Trigger: CAGTTCAAAGATCACATTGTCCTCACAGTAGGGCCAGATAAGAATCCATTTGATGAAGCTCAACAAAAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS CAA 90 bp | CATCTGCCTCACATTCTTCAGAGAATGATAGATGTAAACCACCTTTaGTTGAGCTTCATCAAATGGATTCTTATCTGGCCCTACTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: HLPHILQRMIDVNHL*LSFIKWILIWPYCE Trigger: CTCACAGTAGGGCCAGATAAGAATCCATTTGATGAAGCTCAACAAAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTGAGGCAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS TCA 72 bp | AATGGATTCTTATCTGGCCCTACTGTGAGGACAATGTaGTCTTTGAACTGCAGTCTTATTATGTTGTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: NGFLSGPTVRTM*SLNCSLIMLSN Trigger: GTTGGACAACATAATAAGACTGCAGTTCAAAGATCACATTGTCCTCACAGTAGGGCCAGATAAGAATCCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS CAA 72 bp | CATCCTTATATCTCTGAGGTTGGTGAAACTGAATTGTaGCCCTCTTCTGATCAAAATCTTTTCTCAGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: HPYISEVGETEL*PSSDQNLFSAE Trigger: TTCAGCTGAGAAAAGATTTTGATCAGAAGAGGGCAACAATTCAGTTTCACCAACCTCAGAGATATAAGGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023407.12 ENSMUST00000120674.8 ENSMUST00000160571.2 |
||
| CDS CAA 72 bp | CACATTCTTCAGAGAATGATAGATGTAAACCACCTTTaGTTGAGCTTCATCAAATGGATTCTTATCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HILQRMIDVNHL*LSFIKWILIWP Trigger: GGGCCAGATAAGAATCCATTTGATGAAGCTCAACAAAAGGTGGTTTACATCTATCATTCTCTGAAGAATGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023407.12 ENSMUST00000160571.2 |
||
| CDS CAA 72 bp | CTACCTTATATCTCTGAGGTTGGTGAAACTGAATTGTaGCCCTCTTCTGATCAAAATCTTTTCTCAGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LPYISEVGETEL*PSSDQNLFSAE Trigger: TTCAGCTGAGAAAAGATTTTGATCAGAAGAGGGCAACAATTCAGTTTCACCAACCTCAGAGATATAAGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120667.2 |
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