Pregenerated sensors for RIOK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021428Ensembl transcript IDs: ENSMUST00000021866.10, ENSMUST00000223656.2, ENSMUST00000224477.2, ENSMUST00000224956.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGCTGGCATGTCATCCTTGCCAATGAAGCCCATGAGAAGAACATaGCTTCTTAGCCTGATTGGTTCTGGACATGGTATGTTTGCTGTT | + |
|
Preference number: 1 (lower is better) Translates to: GAGMSSLPMKPMRRT*LLSLIGSGHGMFAV Trigger: AACAGCAAACATACCATGTCCAGAACCAATCAGGCTAAGAAGTCATGTTCTTCTCATGGGCTTCATTGGCAAGGATGACATGCCAGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR CCA 90 bp | AGCTATATCCCAGTTCCTAGAACACTGAAATATCTGATGAACAAATaGCTGGGTGTGAAATGGCACCTGAGCTGGGAGGGCTCACTGGAA | + |
|
Preference number: 1 (lower is better) Translates to: SYIPVPRTLKYLMNK*LGVKWHLSWEGSLE Trigger: TTCCAGTGAGCCCTCCCAGCTCAGGTGCCATTTCACACCCAGCCATTTGTTCATCAGATATTTCAGTGTTCTAGGAACTGGGATATAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR TCA 90 bp | GGTTTGCCTGATAGTTACTGCCGCCATTCCAGGTACAACCCTTGGTaGGTTTTCCAGTTGCATCGTCCAAGTACCAATCATCATCATCAT | + |
|
Preference number: 1 (lower is better) Translates to: GLPDSYCRHSRYNPW*VFQLHRPSTNHHHH Trigger: ATGATGATGATGATTGGTACTTGGACGATGCAACTGGAAAACTCACCAAGGGTTGTACCTGGAATGGCGGCAGTAACTATCAGGCAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR GCA 90 bp | TTTTTCTTTCCTTTTTATCAATGTCAGGGTCAGCAATATGGTTTCTaGATCCGGCTTGATCTTCCTGCTCTTCAGAGACTGTGTCGGAGC | + |
|
Preference number: 1 (lower is better) Translates to: FFFPFYQCQGQQYGF*IRLDLPALQRLCRS Trigger: GCTCCGACACAGTCTCTGAAGAGCAGGAAGATCAAGCCGGATGCAGAAACCATATTGCTGACCCTGACATTGATAAAAAGGAAAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR GCA 90 bp | TTCTTTGTTTTCACAGTTCCTTTAATTCATAAATCAAATGACGGATaGTCTGTCGCTGCAAAAGCCCTCCTCTGGCCTGTAAGACCTGAA | + |
|
Preference number: 1 (lower is better) Translates to: FFVFTVPLIHKSNDG*SVAAKALLWPVRPE Trigger: TTCAGGTCTTACAGGCCAGAGGAGGGCTTTTGCAGCGACAGAGCATCCGTCATTTGATTTATGAATTAAAGGAACTGTGAAAACAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR TCA 90 bp | TTCAAATTTTCGCAAGGACTTGTCAATTGGAGTAGACATTTTGGCTaGATTGTAGTTAGAAGTCTGTCGGTTTGCCTGATAGTTACTGCC | + |
|
Preference number: 1 (lower is better) Translates to: FKFSQGLVNWSRHFG*IVVRSLSVCLIVTA Trigger: GGCAGTAACTATCAGGCAAACCGACAGACTTCTAACTACAATTCAGCCAAAATGTCTACTCCAATTGACAAGTCCTTGCGAAAATTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR CCA 90 bp | GTCTTTGGCATAGACAAAGAAAACAAATGTTCCCAAGTTCGTCCGTaGATGTTCATCATAAACACTCATGTTCTGATACTTGTGGGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: VFGIDKENKCSQVRP*MFIINTHVLILVGK Trigger: TTTTCCCACAAGTATCAGAACATGAGTGTTTATGATGAACATCCACGGACGAACTTGGGAACATTTGTTTTCTTTGTCTATGCCAAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR-3UTR GCA 90 bp | ATGGTACAGCATGTTGAATTCACTGAGATCCGCGTGGACAAGTCTAGCGTCCTGCGGATGCTCTGTCGCTaGAAAAGCCCTCCTCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: MVQHVEFTEIRVDKSSVLRMLCR*KSPPLA Trigger: GGCCAGAGGAGGGCTTTTGCAGCGACAGAGCATCCG...CAGGACGCTAGACTTGTCCACGCGGATCTCAGTGAATTCAACATGCTGTACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR-3UTR GCA 90 bp | GATGGAGGGATCTGTGACGAAGTCGAAGAGCTCCCGCACGGTCATCACTGCAACCCTCATCTCCTTCTCTaGCCACGTCCTCACCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: DGGICDEVEELPHGHHCNPHLLL*PRPHHF Trigger: AAAATGGTGAGGACGTGGGCAGAGAAGGAGATGAGG...GTTGCAGTGATGACCGTGCGGGAGCTCTTCGACTTCGTCACAGATCCCTCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCGGAGCGGAGCTCCAGGCTGTTTCAGATATGTCTTTGGCATAGACAAAGACTGACAGTGAGACAGTaGGGAAGCCTCCTCCAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LSERSSRLFQICLWHRQRLTVRQ*GSLLQL Trigger: TAGCTGGAGGAGGCTTCCTCACTGTCTCACTGTCAG...TCTTTGTCTATGCCAAAGACATATCTGAAACAGCCTGGAGCTCCGCTCCGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR-3UTR TCA 90 bp | GTGTCGGAGCACTCAGAGCCCCCAGCATCGTCTGAACCAAAACAAGTCTCTTCCAGGTACAACCCTTGGTaGGTTTTCCAGTTGCATCGT | + |
|
Preference number: 2 (lower is better) Translates to: VSEHSEPPASSEPKQVSSRYNPW*VFQLHR Trigger: ACGATGCAACTGGAAAACTCACCAAGGGTTGTACCT...GGAAGAGACTTGTTTTGGTTCAGACGATGCTGGGGGCTCTGAGTGCTCCGACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGGGATCTGTGACGAAGTCGAAGAGCTCCCGCACGGTCATCACTGCAACAGCTCTGCATGGATTGGCTaGAGTTCTTTGTTTTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: GGICDEVEELPHGHHCNSSAWIG*SSLFSQ Trigger: CTGTGAAAACAAAGAACTGCAGCCAATCCATGCAGA...GCTGTTGCAGTGATGACCGTGCGGGAGCTCTTCGACTTCGTCACAGATCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTGATGGAGGGATCTGTGACGAAGTCGAAGAGCTCCCGCACGGTCATCACTGCAACCTGTTCTACGGTTaGTCTGTCGGCCTTATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SDGGICDEVEELPHGHHCNLFYG*SVGLIF Trigger: AAAGATAAGGCCGACAGAGCAACCGTAGAACAGGTT...GCAGTGATGACCGTGCGGGAGCTCTTCGACTTCGTCACAGATCCCTCCATCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR-3UTR GCA 90 bp | CTCCAATGCATGTGGGTGGTCATGCTCCACAGACTGAGAAACATCAATGATGTAGTCGCCCTTCACCTCTaGTGCAGCATTCTGGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LQCMWVVMLHRLRNINDVVALHL*CSILEA Trigger: AGCCTCCAGAATGCTGCAGCAGAGGTGAAGGGCGAC...TACATCATTGATGTTTCTCAGTCTGTGGAGCATGACCACCCACATGCATTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR CAA 90 bp | TCCGTTAAAAGCAGAGCCAGGACTGGATCCCGAAAGAATAGGCTTTaGAAACAATCACATGACCACACCCCAGCCTCCTCTGACAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SVKSRARTGSRKNRL*KQSHDHTPASSDSE Trigger: CTCACTGTCAGAGGAGGCTGGGGTGTGGTCATGTGATTGTTTCAAAAGCCTATTCTTTCGGGATCCAGTCCTGGCTCTGCTTTTAACGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR-3UTR TCA 90 bp | CTCTCGGAGCGGAGCTCCAGGCTGTTTCAGATATGTCTTTGGCATAGACAAAGATTTGAAACAATCACATaGCCACACCCCAGCCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LSERSSRLFQICLWHRQRFETIT*PHPSLL Trigger: GAGGAGGCTGGGGTGTGGTCATGTGATTGTTTCAAA...TCTTTGTCTATGCCAAAGACATATCTGAAACAGCCTGGAGCTCCGCTCCGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR-3UTR TCA 90 bp | CCATGGTACAGCATGTTGAATTCACTGAGATCCGCGTGGACAAGTCTAGCGTCCCATGACTTCTTAGCCTaGTTGGTTCTGGACATGGTA | + |
|
Preference number: 2 (lower is better) Translates to: PWYSMLNSLRSAWTSLASHDFLA*LVLDMV Trigger: TACCATGTCCAGAACCAATCAGGCTAAGAAGTCATG...GGACGCTAGACTTGTCCACGCGGATCTCAGTGAATTCAACATGCTGTACCATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCTTGTTCTGGGATCCAAAACCTGTTCTACGGTTGCTCTGTCGGCCTTATCTCCGCCATCTTCTGCATaGATTGGCTGCAGTTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ILVLGSKTCSTVALSALSPPSSA*IGCSSL Trigger: CAAAGAACTGCAGCCAATCCATGCAGAAGATGGCGG...AGATAAGGCCGACAGAGCAACCGTAGAACAGGTTTTGGATCCCAGAACAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR-3UTR GCA 90 bp | AATATGGTTTCTGCATCCGGCTTGATCTTCCTGCTCTTCAGAGACTGTGTCGGATCTCAAGAACTCCAATaGATGTGGGTGGTCATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: NMVSASGLIFLLFRDCVGSQELQ*MWVVML Trigger: GAGCATGACCACCCACATGCATTGGAGTTCTTGAGA...TCCGACACAGTCTCTGAAGAGCAGGAAGATCAAGCCGGATGCAGAAACCATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTGGGAATGGCACAGAAAGAATAGGCTTTTaGAACAATCACATGACCACA | + |
|
Preference number: 2 (lower is better) Translates to: TASCVSRTHRNRAPGNGTERIGF*NNHMTT Trigger: TGTGGTCATGTGATTGTTTCAAAAGCCTATTCTTTC...TGTGCCATTCCCAGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR CAA 90 bp | ACGAAGTCGAAGAGCTCCCGCACGGTCATCACTGCAACAGCATGCTaGGAAAAGAAATCATTGACATTGGTACAGTCTTTTCTCAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: TKSKSSRTVITATAC*EKKSLTLVQSFLKN Trigger: GTTCTTGAGAAAAGACTGTACCAATGTCAATGATTTCTTTTCCAAGCATGCTGTTGCAGTGATGACCGTGCGGGAGCTCTTCGACTTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR-3UTR CCA 90 bp | AATATGGTTTCTGCATCCGGCTTGATCTTCCTGCTCTTCAGAGACTGTGTCGGAGACATTTTTCAAAAGTaGGGCTGGCATGTCATCCTT | + |
|
Preference number: 2 (lower is better) Translates to: NMVSASGLIFLLFRDCVGDIFQK*GWHVIL Trigger: AAGGATGACATGCCAGCCCCACTTTTGAAAAATGTC...TCCGACACAGTCTCTGAAGAGCAGGAAGATCAAGCCGGATGCAGAAACCATATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCTCTTCAGAGACTGTGTCGGAGCACTCAGAGCCCCCAGCATCGTCTGAACTACAACTCCCGTGCCTaGGACTCTGACAGCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PALQRLCRSTQSPQHRLNYNSRA*DSDSWT Trigger: TGTCCAGCTGTCAGAGTCCAAGGCACGGGAGTTGTA...GTTCAGACGATGCTGGGGGCTCTGAGTGCTCCGACACAGTCTCTGAAGAGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR CCA 72 bp | TGTATCCAGAACACACAGGAACAGGGCTCCTGGGAATaGCACATAACGGCCAGACGATGTCTCTCGGAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: CIQNTQEQGSWE*HITARRCLSER Trigger: CCGCTCCGAGAGACATCGTCTGGCCGTTATGTGCCATTCCCAGGAGCCCTGTTCCTGTGTGTTCTGGATACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR TCA 72 bp | ATGACCACACCCCAGCCTCCTCTGACAGTGAGACAGTaGGGAAGCCTCCTCCAGCTACTTCTGTTTCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: MTTPQPPLTVRQ*GSLLQLLLFQG Trigger: ACCCTGAAACAGAAGTAGCTGGAGGAGGCTTCCTCACTGTCTCACTGTCAGAGGAGGCTGGGGTGTGGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR CCA 72 bp | GTCTCAGCGTCGCCCTTCACCTCTGCTGCAGCATTCTaGAGGCTTTTAAGTAGAACGCCGCCATCTTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VSASPFTSAAAF*RLLSRTPPSSA Trigger: TGCAGAAGATGGCGGCGTTCTACTTAAAAGCCTCCAGAATGCTGCAGCAGAGGTGAAGGGCGACGCTGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR CCA 72 bp | TTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTaGGAATGGCACATAACGGCCAGACGATGTCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: FLCIQNTQEQGS*EWHITARRCLS Trigger: CGAGAGACATCGTCTGGCCGTTATGTGCCATTCCCAGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR TCA 72 bp | GCAGAGCCAGGACTGGATCCCGAAAGAATAGGCTTTTaGAACAATCACATGACCACACCCCAGCCTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AEPGLDPERIGF*NNHMTTPQPPL Trigger: CAGAGGAGGCTGGGGTGTGGTCATGTGATTGTTTCAAAAGCCTATTCTTTCGGGATCCAGTCCTGGCTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR TCA 72 bp | GACTGTGTCGGAGCACTCAGAGCCCCCAGCATCGTCTaGACCAAAACAAGTCTCTTCCTTAACTTCACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: DCVGALRAPSIV*TKTSLFLNFTF Trigger: GAAAGTGAAGTTAAGGAAGAGACTTGTTTTGGTTCAGACGATGCTGGGGGCTCTGAGTGCTCCGACACAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR CCA 72 bp | CTGAAATATCTGATGAACAAATGGCTGGGTGTGAAATaGCACCTGAGCTGGGAGGGCTCACTGGAAAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LKYLMNKWLGVK*HLSWEGSLERY Trigger: ATACCTTTCCAGTGAGCCCTCCCAGCTCAGGTGCCATTTCACACCCAGCCATTTGTTCATCAGATATTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR-3UTR CAA 90 bp | AATATGGTTTCTGCATCCGGCTTGATCTTCCTGCTCTTCAGAGACTGTGTCGGAAAACCTGTTCTACGGTaGCTCTGTCGGCCTTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: NMVSASGLIFLLFRDCVGKPVLR*LCRPYL Trigger: AAGATAAGGCCGACAGAGCAACCGTAGAACAGGTTT...TCCGACACAGTCTCTGAAGAGCAGGAAGATCAAGCCGGATGCAGAAACCATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGTCGGAGCACTCAGAGCCCCCAGCATCGTCTGAACCAAAACAAGTCTCTTCTGGGAATATATGCTaGTTTGAACACCTCTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: TVSEHSEPPASSEPKQVSSGNIC*FEHLFI Trigger: GATGAAGAGGTGTTCAAACAAGCATATATTCCCAGA...AGAGACTTGTTTTGGTTCAGACGATGCTGGGGGCTCTGAGTGCTCCGACACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR TCA 72 bp | GATAGTTACTGCCGCCATTCCAGGTACAACCCTTGGTaGGTTTTCCAGTTGCATCGTCCAAGTACCAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: DSYCRHSRYNPW*VFQLHRPSTNH Trigger: ATGATTGGTACTTGGACGATGCAACTGGAAAACTCACCAAGGGTTGTACCTGGAATGGCGGCAGTAACTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR GCA 72 bp | CCTTTTTATCAATGTCAGGGTCAGCAATATGGTTTCTaGATCCGGCTTGATCTTCCTGCTCTTCAGAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: PFYQCQGQQYGF*IRLDLPALQRL Trigger: CAGTCTCTGAAGAGCAGGAAGATCAAGCCGGATGCAGAAACCATATTGCTGACCCTGACATTGATAAAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR CCA 72 bp | TGGAGGCTTTTAAGTAGAACGCCGCCATCTTCTGCATaGATTGGCTGCAGTTCTTTGTTTTCACAGTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: WRLLSRTPPSSA*IGCSSLFSQFL Trigger: AAGGAACTGTGAAAACAAAGAACTGCAGCCAATCCATGCAGAAGATGGCGGCGTTCTACTTAAAAGCCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTACAGTCTTTTCTCAAGAACTCCAATGCATGTGGGTGGTCATGCTCCACACATCTTCTGCATGGATaGGCTGCAGTTCTTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LVQSFLKNSNACGWSCSTHLLHG*AAVLCF Trigger: AAAACAAAGAACTGCAGCCAATCCATGCAGAAGATG...TGTGGAGCATGACCACCCACATGCATTGGAGTTCTTGAGAAAAGACTGTACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR TCA 72 bp | ATGTCATCCTTGCCAATGAAGCCCATGAGAAGAACATaGCTTCTTAGCCTGATTGGTTCTGGACATGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: MSSLPMKPMRRT*LLSLIGSGHGM Trigger: CATACCATGTCCAGAACCAATCAGGCTAAGAAGTCATGTTCTTCTCATGGGCTTCATTGGCAAGGATGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR GCA 72 bp | CATCCTTGTTCTGGGATCCAAAACCTGTTCTACGGTTaGTCTGTCGGCCTTATCTTTAATTCGATACGATTC | + |
|
Preference number: 3 (lower is better) Translates to: HPCSGIQNLFYG*SVGLIFNSIRF Trigger: GAATCGTATCGAATTAAAGATAAGGCCGACAGAGCAACCGTAGAACAGGTTTTGGATCCCAGAACAAGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR TCA 72 bp | TCGCAAGGACTTGTCAATTGGAGTAGACATTTTGGCTaGATTGTAGTTAGAAGTCTGTCGGTTTGCCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: SQGLVNWSRHFG*IVVRSLSVCLI Trigger: TATCAGGCAAACCGACAGACTTCTAACTACAATTCAGCCAAAATGTCTACTCCAATTGACAAGTCCTTGCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR TCA 72 bp | AATCCCATGACAGTCTGGTATAGAATGTTGTCTTGCTaGGTGTTCAAAGCCATGTCTTCTTCCTTTAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: NPMTVWYRMLSC*VFKAMSSSFNL Trigger: GAGGTTAAAGGAAGAAGACATGGCTTTGAACACTCAGCAAGACAACATTCTATACCAGACTGTCATGGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR CCA 72 bp | ATAGACAAAGAAAACAAATGTTCCCAAGTTCGTCCGTaGATGTTCATCATAAACACTCATGTTCTGATACTT | + |
|
Preference number: 3 (lower is better) Translates to: IDKENKCSQVRP*MFIINTHVLIL Trigger: AAGTATCAGAACATGAGTGTTTATGATGAACATCCACGGACGAACTTGGGAACATTTGTTTTCTTTGTCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTGTCGGAGCACTCAGAGCCCCCAGCATCGTCTGAACCAAAACAAGTCTCTTCCGCGTCGTCAAATTaGCCGGGGACCACCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVSEHSEPPASSEPKQVSSASSN*PGTTEA Trigger: GGCTTCGGTGGTCCCCGGGCAATTTGACGACGCGGA...AGAGACTTGTTTTGGTTCAGACGATGCTGGGGGCTCTGAGTGCTCCGACACAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| CDS-3UTR TCA 90 bp | CTGATGAACAAATGGCTGGGTGTGAAATGGCACCTGAGCTGGGAGGGCTCACTGTCCTCATGTACTGAATaGCCTGCAGGTACAACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LMNKWLGVKWHLSWEGSLSSCTE*PAGTTP Trigger: GGGAGTTGTACCTGCAGGTCATTCAGTACATGAGGA...CAGTGAGCCCTCCCAGCTCAGGTGCCATTTCACACCCAGCCATTTGTTCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CCA 90 bp | CTGATGAACAAATGGCTGGGTGTGAAATGGCACCTGAGCTGGGAGGGCTCACTGGAACTCCAATGCATGTaGGTGGTCATGCTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMNKWLGVKWHLSWEGSLELQCM*VVMLHR Trigger: TCTGTGGAGCATGACCACCCACATGCATTGGAGTTC...CAGTGAGCCCTCCCAGCTCAGGTGCCATTTCACACCCAGCCATTTGTTCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | ACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTGGGAATGGCACACCTCATCTCCTTCTCTaGCCACGTCCTCACCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TASCVSRTHRNRAPGNGTPHLLL*PRPHHF Trigger: AAAATGGTGAGGACGTGGGCAGAGAAGGAGATGAGG...TGTGCCATTCCCAGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CCA 90 bp | GCTCTCTCCACTGGGTGTGCTAGCATAGTATACATTAGCTTCTTTTCCAGTGCTCTCCTCACAGTCACTTaGAAGGCTCGACCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALSTGCASIVYISFFSSALLTVT*KARPGW Trigger: CCAGCCAGGTCGAGCCTTCCAAGTGACTGTGAGGAG...AGCACTGGAAAAGAAGCTAATGTATACTATGCTAGCACACCCAGTGGAGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| 3UTR CAA 72 bp | AGCAGAGCCAGGACTGGATCCCGAAAGAATAGGCTTTaGAAACAATCACATGACCACACCCCAGCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRARTGSRKNRL*KQSHDHTPASS Trigger: AGAGGAGGCTGGGGTGTGGTCATGTGATTGTTTCAAAAGCCTATTCTTTCGGGATCCAGTCCTGGCTCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | ACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTGGGAATGGCACATTTGTTTTCACTGTCTaGGGAATCCGCGTCGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TASCVSRTHRNRAPGNGTFVFTV*GIRVVK Trigger: TTTGACGACGCGGATTCCTCAGACAGTGAAAACAAA...TGTGCCATTCCCAGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | GAAATATCTGATGAACAAATGGCTGGGTGTGAAATGGCACCTGAGCTGGGAGGGTTTCTGCATCCGGCTTaGTCTTCCTGCTCTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EISDEQMAGCEMAPELGGFLHPA*SSCSSE Trigger: CTCTGAAGAGCAGGAAGATCAAGCCGGATGCAGAAA...CCCTCCCAGCTCAGGTGCCATTTCACACCCAGCCATTTGTTCATCAGATATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | CCTAGGGTTTCCTTTACAATAGCCACGCCGGAACCTGAATTCCCCAGTCACATAAGGTACAACCCTTGGTaGGTTTTCCAGTTGCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: PRVSFTIATPEPEFPSHIRYNPW*VFQLHR Trigger: ACGATGCAACTGGAAAACTCACCAAGGGTTGTACCT...TATGTGACTGGGGAATTCAGGTTCCGGCGTGGCTATTGTAAAGGAAACCCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224477.2 |
||
| CDS-3UTR TCA 90 bp | CAGGATCATAGGACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTCCCATGAGAAGAACATaGCTTCTTAGCCTGATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QDHRTASCVSRTHRNRAPPMRRT*LLSLIG Trigger: ACCAATCAGGCTAAGAAGTCATGTTCTTCTCATGGG...AGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGTCCTATGATCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | ACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTGGGAATGGCACACCTTTAACCTCATCATaGTGTCCACATCTCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TASCVSRTHRNRAPGNGTPLTSS*CPHLSH Trigger: ATGAGAGAGATGTGGACATCATGATGAGGTTAAAGG...TGTGCCATTCCCAGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | AAACAAATGTTCCCAAGTTCGTCCGTGGATGTTCATCATAAACACTCATGTTCTTCCGCGTCGTCAAATTaGCCGGGGACCACCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQMFPSSSVDVHHKHSCSSASSN*PGTTEA Trigger: GGCTTCGGTGGTCCCCGGGCAATTTGACGACGCGGA...AGAACATGAGTGTTTATGATGAACATCCACGGACGAACTTGGGAACATTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | AAGAATAGGCTTTTGAAACAATCACATGACCACACCCCAGCCTCCTCTGACAGTGCCCTTCACCTCTGCTaGAGCATTCTGGAGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KNRLLKQSHDHTPASSDSALHLC*SILEAF Trigger: AAAAGCCTCCAGAATGCTGCAGCAGAGGTGAAGGGC...ACTGTCAGAGGAGGCTGGGGTGTGGTCATGTGATTGTTTCAAAAGCCTATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | CTCCTTCTCTGCCCACGTCCTCACCATTTTCCTAGGGTTTCCTTTACAATAGCCGCTAGCCTCTTGGTTTaGCCTCCTTTCCAAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCPRPHHFPRVSFTIAASLLV*PPFQKD Trigger: GTCTTTTTGGAAAGGAGGGCAAACCAAGAGGCTAGC...GGCTATTGTAAAGGAAACCCTAGGAAAATGGTGAGGACGTGGGCAGAGAAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTGGGAATGGCACAGACATTTTTCAAAAGTaGGGCTGGCATGTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TASCVSRTHRNRAPGNGTDIFQK*GWHVIL Trigger: AAGGATGACATGCCAGCCCCACTTTTGAAAAATGTC...TGTGCCATTCCCAGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | CTCTCGGAGCGGAGCTCCAGGCTGTTTCAGATATGTCTTTGGCATAGACAAAGACATGACTTCTTAGCCTaGTTGGTTCTGGACATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSERSSRLFQICLWHRQRHDFLA*LVLDMV Trigger: TACCATGTCCAGAACCAATCAGGCTAAGAAGTCATG...TCTTTGTCTATGCCAAAGACATATCTGAAACAGCCTGGAGCTCCGCTCCGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | CATAGGACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTGGGAATACAAGTCTAGCGTCCTaGTACATTTTCCTCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HRTASCVSRTHRNRAPGNTSLAS*YIFLMY Trigger: GTACATGAGGAAAATGTATCAGGACGCTAGACTTGT...ATTCCCAGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGTCCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | GTGCTAATACAGCCATGTATCTCTGATATGTGGTCTTTATGCAACAACTTGAATTCCGCGTCGTCAAATTaGCCGGGGACCACCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLIQPCISDMWSLCNNLNSASSN*PGTTEA Trigger: GGCTTCGGTGGTCCCCGGGCAATTTGACGACGCGGA...ATTCAAGTTGTTGCATAAAGACCACATATCAGAGATACATGGCTGTATTAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223656.2 ENSMUST00000224477.2 |
||
| CDS-3UTR GCA 90 bp | GATTGCTCTGCTCTCTCCACTGGGTGTGCTAGCATAGTATACATTAGCTTCTTTGCCCTTCACCTCTGCTaGAGCATTCTGGAGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DCSALSTGCASIVYISFFALHLC*SILEAF Trigger: AAAAGCCTCCAGAATGCTGCAGCAGAGGTGAAGGGC...AAAGAAGCTAATGTATACTATGCTAGCACACCCAGTGGAGAGAGCAGAGCAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224477.2 |
||
| CDS-3UTR GCA 90 bp | CCTAGGGTTTCCTTTACAATAGCCACGCCGGAACCTGAATTCCCCAGTCACATAGGTGAGTTTTCCAGTTaGATCGTCCAAGTACCAATC | + |
|
Preference number: 4 (lower is better) Translates to: PRVSFTIATPEPEFPSHIGEFSS*IVQVPI Trigger: GATTGGTACTTGGACGATGCAACTGGAAAACTCACC...TATGTGACTGGGGAATTCAGGTTCCGGCGTGGCTATTGTAAAGGAAACCCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224477.2 |
||
| CDS-3UTR GCA 90 bp | GGATCCCGAAAGAATAGGCTTTTGAAACAATCACATGACCACACCCCAGCCTCCCTTGGTCCTCTGGGATaGTATTTCCATAGCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSRKNRLLKQSHDHTPASLGPLG*YFHSLF Trigger: GAAAAGGCTATGGAAATAGCATCCCAGAGGACCAAG...GGAGGCTGGGGTGTGGTCATGTGATTGTTTCAAAAGCCTATTCTTTCGGGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CCA 90 bp | CTCTCGGAGCGGAGCTCCAGGCTGTTTCAGATATGTCTTTGGCATAGACAAAGATCTGCTGCAGCATTCTaGAGGCTTTTAAGTAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: LSERSSRLFQICLWHRQRSAAAF*RLLSRT Trigger: CGTTCTACTTAAAAGCCTCCAGAATGCTGCAGCAGA...TCTTTGTCTATGCCAAAGACATATCTGAAACAGCCTGGAGCTCCGCTCCGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CCA 90 bp | CTTTTGAAACAATCACATGACCACACCCCAGCCTCCTCTGACAGTGAGACAGTGTTTCAAAAGTGGGGCTaGCATGTCATCCTTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKQSHDHTPASSDSETVFQKWG*HVILAN Trigger: ATTGGCAAGGATGACATGCCAGCCCCACTTTTGAAA...CACTGTCTCACTGTCAGAGGAGGCTGGGGTGTGGTCATGTGATTGTTTCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | GGATCCCGAAAGAATAGGCTTTTGAAACAATCACATGACCACACCCCAGCCTCCACCTCTTCATCCACATaGTCTTGGCTAGTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRKNRLLKQSHDHTPASTSSST*SWLVFS Trigger: AGAAAAGACTAGCCAAGATCATGTGGATGAAGAGGT...GGAGGCTGGGGTGTGGTCATGTGATTGTTTCAAAAGCCTATTCTTTCGGGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | CCTAGGGTTTCCTTTACAATAGCCACGCCGGAACCTGAATTCCCCAGTCACATATCTGCATGGATTGGCTaGAGTTCTTTGTTTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PRVSFTIATPEPEFPSHISAWIG*SSLFSL Trigger: CAGTGAAAACAAAGAACTGCAGCCAATCCATGCAGA...TATGTGACTGGGGAATTCAGGTTCCGGCGTGGCTATTGTAAAGGAAACCCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224477.2 |
||
| CDS-3UTR GCA 90 bp | GAAAACAAATGTTCCCAAGTTCGTCCGTGGATGTTCATCATAAACACTCATGTTGTCGCCCTTCACCTCTaGTGCAGCATTCTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENKCSQVRPWMFIINTHVVALHL*CSILEA Trigger: AGCCTCCAGAATGCTGCAGCAGAGGTGAAGGGCGAC...AACATGAGTGTTTATGATGAACATCCACGGACGAACTTGGGAACATTTGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CCA 90 bp | CAGGATCATAGGACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTATCTTCTGCATGGATTaGCTGCAGTTCTTTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QDHRTASCVSRTHRNRAPIFCMD*LQFFVF Trigger: GAAAACAAAGAACTGCAGCCAATCCATGCAGAAGAT...AGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGTCCTATGATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CCA 90 bp | AAGAATAGGCTTTTGAAACAATCACATGACCACACCCCAGCCTCCTCTGACAGTTCTTCCTTGGTCCTCTaGGATGCTATTTCCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNRLLKQSHDHTPASSDSSSLVL*DAISIA Trigger: GGCTATGGAAATAGCATCCCAGAGGACCAAGGAAGA...ACTGTCAGAGGAGGCTGGGGTGTGGTCATGTGATTGTTTCAAAAGCCTATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | CATAGGACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTGGGAATAGTAGACATTTTGGCTaGATTGTAGTTAGAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRTASCVSRTHRNRAPGNSRHFG*IVVRSL Trigger: CAGACTTCTAACTACAATTCAGCCAAAATGTCTACT...ATTCCCAGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGTCCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | GAAATATCTGATGAACAAATGGCTGGGTGTGAAATGGCACCTGAGCTGGGAGGGACAGCCATGTATCTCTaGTATGTGGTCTTTATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EISDEQMAGCEMAPELGGTAMYL*YVVFMQ Trigger: TTGCATAAAGACCACATATCAGAGATACATGGCTGT...CCCTCCCAGCTCAGGTGCCATTTCACACCCAGCCATTTGTTCATCAGATATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | AGCGGAGCTCCAGGCTGTTTCAGATATGTCTTTGGCATAGACAAAGAAAACAAACCGTGCCTTGGACTCTaGCAGCTGGACATTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGAPGCFRYVFGIDKENKPCLGL*QLDIFQ Trigger: TTGAAAAATGTCCAGCTGTCAGAGTCCAAGGCACGG...TTTGTTTTCTTTGTCTATGCCAAAGACATATCTGAAACAGCCTGGAGCTCCGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | GTATATTTTGATTGCTCTGCTCTCTCCACTGGGTGTGCTAGCATAGTATACATTGTATGGAAGCCTGTCTaGGGAATCCGCGTCGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VYFDCSALSTGCASIVYIVWKPV*GIRVVK Trigger: TTTGACGACGCGGATTCCTCAGACAGGCTTCCATAC...AATGTATACTATGCTAGCACACCCAGTGGAGAGAGCAGAGCAATCAAAATATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTTCTCTGCCCACGTCCTCACCATTTTCCTAGGGTTTCCTTTACAATAGCCATCTTCTGCATGGATTaGCTGCAGTTCTTTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLCPRPHHFPRVSFTIAIFCMD*LQFFVF Trigger: GAAAACAAAGAACTGCAGCCAATCCATGCAGAAGAT...GGCTATTGTAAAGGAAACCCTAGGAAAATGGTGAGGACGTGGGCAGAGAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224477.2 |
||
| CDS-3UTR CCA 90 bp | CAGGATCATAGGACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTAAATCATCCTTGTTCTaGGATCCAAAACCTGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QDHRTASCVSRTHRNRAPKSSLF*DPKPVL Trigger: TAGAACAGGTTTTGGATCCCAGAACAAGGATGATTT...AGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGTCCTATGATCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CCA 90 bp | CTTTTGAAACAATCACATGACCACACCCCAGCCTCCTCTGACAGTGAGACAGTGAATCCCATGACAGTCTaGTATAGAATGTTGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKQSHDHTPASSDSETVNPMTV*YRMLSC Trigger: GCAAGACAACATTCTATACCAGACTGTCATGGGATT...CACTGTCTCACTGTCAGAGGAGGCTGGGGTGTGGTCATGTGATTGTTTCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | GAAATATCTGATGAACAAATGGCTGGGTGTGAAATGGCACCTGAGCTGGGAGGGACTGAGAAACATCAATaGTGTAAACATCTCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: EISDEQMAGCEMAPELGGTEKHQ*CKHLHH Trigger: ATGGTGGAGATGTTTACATCATTGATGTTTCTCAGT...CCCTCCCAGCTCAGGTGCCATTTCACACCCAGCCATTTGTTCATCAGATATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | GAAATATCTGATGAACAAATGGCTGGGTGTGAAATGGCACCTGAGCTGGGAGGGGAATATATGCTTGTTTaGACACCTCTTCATCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: EISDEQMAGCEMAPELGGEYMLV*TPLHPH Trigger: ATGTGGATGAAGAGGTGTTCAAACAAGCATATATTC...CCCTCCCAGCTCAGGTGCCATTTCACACCCAGCCATTTGTTCATCAGATATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | AACCTGAATTCCCCAGTCACATACTTATCACGATCTTTGAACATCAAAATAGAAGTCGCCCTTCACCTCTaGTGCAGCATTCTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLNSPVTYLSRSLNIKIEVALHL*CSILEA Trigger: AGCCTCCAGAATGCTGCAGCAGAGGTGAAGGGCGAC...TTCTATTTTGATGTTCAAAGATCGTGATAAGTATGTGACTGGGGAATTCAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224477.2 |
||
| CDS-3UTR CCA 90 bp | AATAATACCTTAATAAGTCCGTTAAAAGCAGAGCCAGGACTGGATCCCGAAAGACCGCCATCTTCTGCATaGATTGGCTGCAGTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NNTLISPLKAEPGLDPERPPSSA*IGCSSL Trigger: CAAAGAACTGCAGCCAATCCATGCAGAAGATGGCGG...TCTTTCGGGATCCAGTCCTGGCTCTGCTTTTAACGGACTTATTAAGGTATTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR CAA 72 bp | AAGAGCTCCCGCACGGTCATCACTGCAACAGCATGCTaGGAAAAGAAATCATTGACATTGGTACAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSSRTVITATAC*EKKSLTLVQSF Trigger: AAAAGACTGTACCAATGTCAATGATTTCTTTTCCAAGCATGCTGTTGCAGTGATGACCGTGCGGGAGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| CDS-3UTR TCA 90 bp | GAAAACAAATGTTCCCAAGTTCGTCCGTGGATGTTCATCATAAACACTCATGTTAGGTACAACCCTTGGTaGGTTTTCCAGTTGCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: ENKCSQVRPWMFIINTHVRYNPW*VFQLHR Trigger: ACGATGCAACTGGAAAACTCACCAAGGGTTGTACCT...AACATGAGTGTTTATGATGAACATCCACGGACGAACTTGGGAACATTTGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | GAAAACAAATGTTCCCAAGTTCGTCCGTGGATGTTCATCATAAACACTCATGTTTCTCAAGAACTCCAATaGATGTGGGTGGTCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ENKCSQVRPWMFIINTHVSQELQ*MWVVML Trigger: GAGCATGACCACCCACATGCATTGGAGTTCTTGAGA...AACATGAGTGTTTATGATGAACATCCACGGACGAACTTGGGAACATTTGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CCA 90 bp | CCTGAATTCCCCAGTCACATACTTATCACGATCTTTGAACATCAAAATAGAAGTCCGCCATCTTCTGCATaGATTGGCTGCAGTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PEFPSHILITIFEHQNRSPPSSA*IGCSSL Trigger: CAAAGAACTGCAGCCAATCCATGCAGAAGATGGCGG...ACTTCTATTTTGATGTTCAAAGATCGTGATAAGTATGTGACTGGGGAATTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224477.2 |
||
| CDS-3UTR CCA 90 bp | ATAGACAAAGAAAACAAATGTTCCCAAGTTCGTCCGTGGATGTTCATCATAAACAGCGCGGGGACCTTCTaGACTCCTGACAAATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IDKENKCSQVRPWMFIINSAGTF*TPDKSF Trigger: AAAAGATTTGTCAGGAGTCCAGAAGGTCCCCGCGCT...GTTTATGATGAACATCCACGGACGAACTTGGGAACATTTGTTTTCTTTGTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | AGCGGAGCTCCAGGCTGTTTCAGATATGTCTTTGGCATAGACAAAGAAAACAAAGGTTCTGGGAATATATaGTTGTTTGAACACCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGAPGCFRYVFGIDKENKGSGNI*LFEHLF Trigger: GAAGAGGTGTTCAAACAAGCATATATTCCCAGAACC...TTTGTTTTCTTTGTCTATGCCAAAGACATATCTGAAACAGCCTGGAGCTCCGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | GAACCTGAATTCCCCAGTCACATACTTATCACGATCTTTGAACATCAAAATAGATTTGTTTTCACTGTCTaGGGAATCCGCGTCGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EPEFPSHILITIFEHQNRFVFTV*GIRVVK Trigger: TTTGACGACGCGGATTCCTCAGACAGTGAAAACAAA...TCTATTTTGATGTTCAAAGATCGTGATAAGTATGTGACTGGGGAATTCAGGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224477.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAATGTTCCCAAGTTCGTCCGTGGATGTTCATCATAAACACTCATGTTCTATTTTCCTCATGTACTaGATGACCTGCAGGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: KQMFPSSSVDVHHKHSCSIFLMY*MTCRYN Trigger: GTTGTACCTGCAGGTCATTCAGTACATGAGGAAAAT...AGAACATGAGTGTTTATGATGAACATCCACGGACGAACTTGGGAACATTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | ATAGACAAAGAAAACAAATGTTCCCAAGTTCGTCCGTGGATGTTCATCATAAACGGTGAGTTTTCCAGTTaGATCGTCCAAGTACCAATC | + |
|
Preference number: 4 (lower is better) Translates to: IDKENKCSQVRPWMFIINGEFSS*IVQVPI Trigger: GATTGGTACTTGGACGATGCAACTGGAAAACTCACC...GTTTATGATGAACATCCACGGACGAACTTGGGAACATTTGTTTTCTTTGTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | ATAGACAAAGAAAACAAATGTTCCCAAGTTCGTCCGTGGATGTTCATCATAAACAACCTGTTCTACGGTTaGTCTGTCGGCCTTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IDKENKCSQVRPWMFIINNLFYG*SVGLIF Trigger: AAAGATAAGGCCGACAGAGCAACCGTAGAACAGGTT...GTTTATGATGAACATCCACGGACGAACTTGGGAACATTTGTTTTCTTTGTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR TCA 90 bp | AATAATACCTTAATAAGTCCGTTAAAAGCAGAGCCAGGACTGGATCCCGAAAGAAAGTTTTGTATATTTTaGTTGCTCTGCTCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NNTLISPLKAEPGLDPERKFCIF*LLCSLH Trigger: GTGGAGAGAGCAGAGCAATCAAAATATACAAAACTT...TCTTTCGGGATCCAGTCCTGGCTCTGCTTTTAACGGACTTATTAAGGTATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR GCA 90 bp | ATAGACAAAGAAAACAAATGTTCCCAAGTTCGTCCGTGGATGTTCATCATAAACTCTGCATGGATTGGCTaGAGTTCTTTGTTTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: IDKENKCSQVRPWMFIINSAWIG*SSLFSL Trigger: CAGTGAAAACAAAGAACTGCAGCCAATCCATGCAGA...GTTTATGATGAACATCCACGGACGAACTTGGGAACATTTGTTTTCTTTGTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| 3UTR CAA 72 bp | GGCCTTATCTTTAATTCGATACGATTCTGCTTCCTTTaGTCTCAATTTTACGGTGACTTTATTTGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLIFNSIRFCFL*SQFYGDFICHR Trigger: TCTGTGACAAATAAAGTCACCGTAAAATTGAGACAAAAGGAAGCAGAATCGTATCGAATTAAAGATAAGGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| CDS-3UTR CAA 90 bp | CTGATGAACAAATGGCTGGGTGTGAAATGGCACCTGAGCTGGGAGGGCTCACTGATCCGCGTCGTCAAATaGCCCGGGGACCACCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LMNKWLGVKWHLSWEGSLIRVVK*PGDHRS Trigger: GCTTCGGTGGTCCCCGGGCAATTTGACGACGCGGAT...CAGTGAGCCCTCCCAGCTCAGGTGCCATTTCACACCCAGCCATTTGTTCATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CAA 90 bp | CTTGATCTTCCTGCTCTTCAGAGACTGTGTCGGAGCACTCAGAGCCCCCAGCATGCTGGCCTCCCTTTTTaGCCTCAATTCTCTCCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LDLPALQRLCRSTQSPQHAGLPF*PQFSPL Trigger: TAGCGGAGAGAATTGAGGCAAAAAAGGGAGGCCAGC...ATGCTGGGGGCTCTGAGTGCTCCGACACAGTCTCTGAAGAGCAGGAAGATCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| CDS TCA 90 bp | GCCATCTTCTGCATGGATTGGCTGCAGTTCTTTGTTTTCACTGTCTaGGGAATCCGCGTCGTCAAATTGCCCGGGGACCACCGAAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AIFCMDWLQFFVFTV*GIRVVKLPGDHRSH Trigger: ATGGCTTCGGTGGTCCCCGGGCAATTTGACGACGCGGATTCCTCAGACAGTGAAAACAAAGAACTGCAGCCAATCCATGCAGAAGATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021866.10 ENSMUST00000224477.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCCACTGGGTGTGCTAGCATAGTATACATTAGCTTCTTTTCCAGTGCTAATATCCGCGTCGTCAAATaGCCCGGGGACCACCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSTGCASIVYISFFSSANIRVVK*PGDHRS Trigger: GCTTCGGTGGTCCCCGGGCAATTTGACGACGCGGAT...ATTAGCACTGGAAAAGAAGCTAATGTATACTATGCTAGCACACCCAGTGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000223656.2 ENSMUST00000224477.2 |
||
| CDS-3UTR CAA 90 bp | CAGGATCATAGGACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTGTTTCTGCATCCGGCTaGATCTTCCTGCTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QDHRTASCVSRTHRNRAPVSASG*IFLLFR Trigger: TCTGAAGAGCAGGAAGATCAAGCCGGATGCAGAAAC...AGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGTCCTATGATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS GCA 90 bp | GAGGGAAGCCAGGGTAGAAGCTCGACGCAGGAACTGTTCTACGGTTaGTCTGTCGGCCTTATCTTTAATTCGATACGATTCTGCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EGSQGRSSTQELFYG*SVGLIFNSIRFCFL Trigger: AAGGAAGCAGAATCGTATCGAATTAAAGATAAGGCCGACAGAGCAACCGTAGAACAGTTCCTGCGTCGAGCTTCTACCCTGGCTTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224956.2 |
||
| CDS-3UTR CAA 90 bp | CCGGAACCTGAATTCCCCAGTCACATACTTATCACGATCTTTGAACATCAAAATATCCGCGTCGTCAAATaGCCCGGGGACCACCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PEPEFPSHILITIFEHQNIRVVK*PGDHRS Trigger: GCTTCGGTGGTCCCCGGGCAATTTGACGACGCGGAT...ATTTTGATGTTCAAAGATCGTGATAAGTATGTGACTGGGGAATTCAGGTTCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000223656.2 ENSMUST00000224477.2 |
||
| CDS-3UTR CAA 90 bp | GAAATATCTGATGAACAAATGGCTGGGTGTGAAATGGCACCTGAGCTGGGAGGGCTGGACATGGTATGTTaGCTGTTTTTAGCCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: EISDEQMAGCEMAPELGGLDMVC*LFLACT Trigger: TGTGCAGGCTAAAAACAGCAAACATACCATGTCCAG...CCCTCCCAGCTCAGGTGCCATTTCACACCCAGCCATTTGTTCATCAGATATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CAA 90 bp | AATAATACCTTAATAAGTCCGTTAAAAGCAGAGCCAGGACTGGATCCCGAAAGATACAACTCCCGTGCCTaGGACTCTGACAGCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: NNTLISPLKAEPGLDPERYNSRA*DSDSWT Trigger: TGTCCAGCTGTCAGAGTCCAAGGCACGGGAGTTGTA...TCTTTCGGGATCCAGTCCTGGCTCTGCTTTTAACGGACTTATTAAGGTATTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CAA 90 bp | CATAGGACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTGGGAATACTGCAACAGCATGCTaGGAAAAGAAATCATTGACA | + |
|
Preference number: 5 (lower is better) Translates to: HRTASCVSRTHRNRAPGNTATAC*EKKSLT Trigger: TGTCAATGATTTCTTTTCCAAGCATGCTGTTGCAGT...ATTCCCAGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGTCCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CAA 90 bp | CATAGGACAGCTTCCTGTGTATCCAGAACACACAGGAACAGGGCTCCTGGGAATTCTGGGAATATATGCTaGTTTGAACACCTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: HRTASCVSRTHRNRAPGNSGNIC*FEHLFI Trigger: GATGAAGAGGTGTTCAAACAAGCATATATTCCCAGA...ATTCCCAGGAGCCCTGTTCCTGTGTGTTCTGGATACACAGGAAGCTGTCCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CAA 90 bp | AAGAATAGGCTTTTGAAACAATCACATGACCACACCCCAGCCTCCTCTGACAGTCATCTTCTGCATGGATaGGCTGCAGTTCTTTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KNRLLKQSHDHTPASSDSHLLHG*AAVLCF Trigger: AAAACAAAGAACTGCAGCCAATCCATGCAGAAGATG...ACTGTCAGAGGAGGCTGGGGTGTGGTCATGTGATTGTTTCAAAAGCCTATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CAA 90 bp | AATAATACCTTAATAAGTCCGTTAAAAGCAGAGCCAGGACTGGATCCCGAAAGAAAACCTGTTCTACGGTaGCTCTGTCGGCCTTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: NNTLISPLKAEPGLDPERKPVLR*LCRPYL Trigger: AAGATAAGGCCGACAGAGCAACCGTAGAACAGGTTT...TCTTTCGGGATCCAGTCCTGGCTCTGCTTTTAACGGACTTATTAAGGTATTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CAA 90 bp | AATAATACCTTAATAAGTCCGTTAAAAGCAGAGCCAGGACTGGATCCCGAAAGACTAGTCTTTTCTTCCTaGGTCCTCTGGGATGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: NNTLISPLKAEPGLDPERLVFSS*VLWDAI Trigger: AATAGCATCCCAGAGGACCAAGGAAGAAAAGACTAG...TCTTTCGGGATCCAGTCCTGGCTCTGCTTTTAACGGACTTATTAAGGTATTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CAA 90 bp | AATAATACCTTAATAAGTCCGTTAAAAGCAGAGCCAGGACTGGATCCCGAAAGACGATTCTGCTTCCTTTaGTCTCAATTTTACGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NNTLISPLKAEPGLDPERRFCFL*SQFYGD Trigger: GTCACCGTAAAATTGAGACAAAAGGAAGCAGAATCG...TCTTTCGGGATCCAGTCCTGGCTCTGCTTTTAACGGACTTATTAAGGTATTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS-3UTR CAA 90 bp | GTATATTTTGATTGCTCTGCTCTCTCCACTGGGTGTGCTAGCATAGTATACATTCGATTCTGCTTCCTTTaGTCTCAATTTTACGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VYFDCSALSTGCASIVYIRFCFL*SQFYGD Trigger: GTCACCGTAAAATTGAGACAAAAGGAAGCAGAATCG...AATGTATACTATGCTAGCACACCCAGTGGAGAGAGCAGAGCAATCAAAATATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224477.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTAATACAGCCATGTATCTCTGATATGTGGTCTTTATGCAACAACTTGAATCATCTTCTGCATGGATaGGCTGCAGTTCTTTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLIQPCISDMWSLCNNLNHLLHG*AAVLCF Trigger: AAAACAAAGAACTGCAGCCAATCCATGCAGAAGATG...ATTCAAGTTGTTGCATAAAGACCACATATCAGAGATACATGGCTGTATTAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224477.2 |
||
| CDS-3UTR CAA 90 bp | AATAATACCTTAATAAGTCCGTTAAAAGCAGAGCCAGGACTGGATCCCGAAAGAGAAGTTTTGTATATTTaGATTGCTCTGCTCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NNTLISPLKAEPGLDPEREVLYI*IALLSP Trigger: TGGAGAGAGCAGAGCAATCAAAATATACAAAACTTC...TCTTTCGGGATCCAGTCCTGGCTCTGCTTTTAACGGACTTATTAAGGTATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021866.10 |
||
| CDS GCA 72 bp | TATGGAAGCCTGTCTGAGGAATCCGCGTCGTCAAATTaGCCGGGGACCACCGAAGCCATCCTGTCCAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: YGSLSEESASSN*PGTTEAILSRL Trigger: CAGTCTGGACAGGATGGCTTCGGTGGTCCCCGGGCAATTTGACGACGCGGATTCCTCAGACAGGCTTCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| CDS GCA 72 bp | TTGTTTTCACTGTCTGAGGAATCCGCGTCGTCAAATTaGCCGGGGACCACCGAAGCCATCCTGTCCAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: LFSLSEESASSN*PGTTEAILSRL Trigger: CAGTCTGGACAGGATGGCTTCGGTGGTCCCCGGGCAATTTGACGACGCGGATTCCTCAGACAGTGAAAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021866.10 ENSMUST00000224477.2 |
||
| CDS CAA 90 bp | TTAAGTAGAACGCCGCCATCTTCTGCATGGATTGGCTGCAGTTCTTaGTTTTCACTGTCTGAGGAATCCGCGTCGTCAAATTGCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRTPPSSAWIGCSS*FSLSEESASSNCPG Trigger: CCCCGGGCAATTTGACGACGCGGATTCCTCAGACAGTGAAAACAAAGAACTGCAGCCAATCCATGCAGAAGATGGCGGCGTTCTACTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021866.10 ENSMUST00000224477.2 |
||
| CDS CAA 72 bp | ACGCCGCCATCTTCTGCATGGATTGGCTGCAGTTCTTaGTTTTCACTGTCTGAGGAATCCGCGTCGTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: TPPSSAWIGCSS*FSLSEESASSN Trigger: ATTTGACGACGCGGATTCCTCAGACAGTGAAAACAAAGAACTGCAGCCAATCCATGCAGAAGATGGCGGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021866.10 ENSMUST00000224477.2 |
||
| CDS CAA 72 bp | CTCAATTCTCTCCGCTACGCTGTAGGTGCTAGCCTCTaGGTTTGCCCTCCTTTCCAAAAAGACAGTAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LNSLRYAVGASL*VCPPFQKDSSD Trigger: GTCACTACTGTCTTTTTGGAAAGGAGGGCAAACCAAGAGGCTAGCACCTACAGCGTAGCGGAGAGAATTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| CDS GCA 72 bp | TTAAGTAGAACGCCGCCATCTTCTGCATGGATTGGCTaGAGTTCTTTGTTTTCACTGTCTGAGGAATCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: LSRTPPSSAWIG*SSLFSLSEESA Trigger: CGCGGATTCCTCAGACAGTGAAAACAAAGAACTGCAGCCAATCCATGCAGAAGATGGCGGCGTTCTACTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021866.10 ENSMUST00000224477.2 |
||
| CDS GCA 72 bp | CAGGGTAGAAGCTCGACGCAGGAACTGTTCTACGGTTaGTCTGTCGGCCTTATCTTTAATTCGATACGATTC | + |
|
Preference number: 6 (lower is better) Translates to: QGRSSTQELFYG*SVGLIFNSIRF Trigger: GAATCGTATCGAATTAAAGATAAGGCCGACAGAGCAACCGTAGAACAGTTCCTGCGTCGAGCTTCTACCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224956.2 |
||
| CDS GCA 72 bp | TCTCTCCGCTACGCTGTAGGTGCTAGCCTCTTGGTTTaGCCTCCTTTCCAAAAAGACAGTAGTGACTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: SLRYAVGASLLV*PPFQKDSSDLI Trigger: AATCAAGTCACTACTGTCTTTTTGGAAAGGAGGGCAAACCAAGAGGCTAGCACCTACAGCGTAGCGGAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| CDS TCA 72 bp | TGGTTTGCCCTCCTTTCCAAAAAGACAGTAGTGACTTaGTTTGTCTTGTTCATCATACTCGCAGAGGTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: WFALLSKKTVVT*FVLFIILAEVK Trigger: TTTTACCTCTGCGAGTATGATGAACAAGACAAATCAAGTCACTACTGTCTTTTTGGAAAGGAGGGCAAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||
| CDS CAA 72 bp | TTGGTTTGCCCTCCTTTCCAAAAAGACAGTAGTGACTaGATTTGTCTTGTTCATCATACTCGCAGAGGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LVCPPFQKDSSD*ICLVHHTRRGK Trigger: TTTACCTCTGCGAGTATGATGAACAAGACAAATCAAGTCACTACTGTCTTTTTGGAAAGGAGGGCAAACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223656.2 |
||