Pregenerated sensors for RINL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051735Ensembl transcript IDs: ENSMUST00000059857.8, ENSMUST00000207462.2, ENSMUST00000209035.2
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTCTTGTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATGGCGTaGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCACTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: LSCSHPFVLLVSRMA*VLLESQTQSPGHCP Trigger: GGGACAGTGCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAACAAGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
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| 3UTR TCA 90 bp | ACTTTTTCCACCTCATTCTGCTGTATAGCTGGAGGCGTAAGCTCATaGTGGTCCCTGTACCTCTGCCACCCTCCTAACTACATGAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: TFSTSFCCIAGGVSS*WSLYLCHPPNYMSC Trigger: GCAGCTCATGTAGTTAGGAGGGTGGCAGAGGTACAGGGACCATCATGAGCTTACGCCTCCAGCTATACAGCAGAATGAGGTGGAAAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR CCA 90 bp | TCCATGCTGACCCAGATGCCTCCAGAATCTTGCTTAGCAGAGGAGTaGGTCAAAAGGTTCGGAAGTGACTGGGGTTTGAGAACTCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: SMLTQMPPESCLAEE*VKRFGSDWGLRTPV Trigger: AACTGGAGTTCTCAAACCCCAGTCACTTCCGAACCTTTTGACCCACTCCTCTGCTAAGCAAGATTCTGGAGGCATCTGGGTCAGCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCGAACGAGCTGGGTGGTaGGGGCACACACCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: LSPAWRGCSWSHRHSPRGERAGW*GHTPLI Trigger: GATTAAAGGTGTGTGCCCCCACCACCCAGCTCGTTC...GCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
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| 3UTR CAA 90 bp | AGCCCAGCATCTCCCGTCTCTCTTGTTCCCATCCGTTCGTTCTCCTaGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGT | + |
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Preference number: 2 (lower is better) Translates to: SPASPVSLVPIRSFS*SPAWRGCSWSHRHS Trigger: ACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAACAAGAGAGACGGGAGATGCTGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCGAGGAAGTAAGACATTaGAGGAGGCACGTCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: LSPAWRGCSWSHRHSPRGEEVRH*RRHVSF Trigger: AAAGGAGACGTGCCTCCTGCAATGTCTTACTTCCTC...GCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAAGTTCCAGGACAGCCAGGGCTACACCGAGGAGCCCTGTCTTGAAAAACCCCTGCCCTCCATGCTaGCCCAGATGCCTCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: TASSRTARATPRSPVLKNPCPPC*PRCLQN Trigger: ATTCTGGAGGCATCTGGGTCAGCATGGAGGGCAGGG...GTTTTTCAAGACAGGGCTCCTCGGTGTAGCCCTGGCTGTCCTGGAACTTGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCACTGTCCCTCATTTATGCCTCCAGAATCTTaGTTAGCAGAGGAGTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: AWVLLESQTQSPGHCPSFMPPES*LAEEWV Trigger: GACCCACTCCTCTGCTAAGCAAGATTCTGGAGGCAT...AAATGAGGGACAGTGCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTTTCCTGGAGTAGCCCAGCATCTCCCGTCTCTCTTGTTCCCATCCGTTCGGCACGTCTCCTTTCCTaGCCTGCCCTCCATGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: KLSWSSPASPVSLVPIRSARLLS*PALHAD Trigger: GTCAGCATGGAGGGCAGGGCAGGAAAGGAGACGTGC...CGAACGGATGGGAACAAGAGAGACGGGAGATGCTGGGCTACTCCAGGAAAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR CCA 90 bp | GCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCACTGTCCCTCATTTAGTACTGTCTGGGTGTaGGTTTTGTTTGCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: AWVLLESQTQSPGHCPSFSTVWV*VLFAGE Trigger: CTCCCCAGCAAACAAAACCCACACCCAGACAGTACT...AAATGAGGGACAGTGCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCAGTGTCCTCATGGTCTTaGCCTCAAGTACTTTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: CLPHGVGAPGVTDTVPGAVSSWS*PQVLFP Trigger: TGGAAAAAGTACTTGAGGCCAAGACCATGAGGACAC...TGCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCCGAGGAGCCCTGTCTTaGAAAACCAAAACAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: LSPAWRGCSWSHRHSPRGRGALS*KTKTTK Trigger: TTTTGTTGTTTTGGTTTTTCAAGACAGGGCTCCTCG...GCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCGTCTCTCTTGTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATGGCGTGGATGCCTCCAGAATCTTaGTTAGCAGAGGAGTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: SRLSCSHPFVLLVSRMAWMPPES*LAEEWV Trigger: GACCCACTCCTCTGCTAAGCAAGATTCTGGAGGCAT...CCACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAACAAGAGAGACGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCTCTCAGGTCCAGACATaGTGTCATTTTTGTAACGAT | + |
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Preference number: 2 (lower is better) Translates to: LSPAWRGCSWSHRHSPRGSQVQT*CHFCND Trigger: ATCGTTACAAAAATGACAGCATGTCTGGACCTGAGA...GCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCTGCTTAGCAGAGGAGTaGGTCAAAAGGTTCGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: FSLSPAWRGCSWSHRHSPCLAEE*VKRFGS Trigger: ACTTCCGAACCTTTTGACCCACTCCTCTGCTAAGCA...GGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGTAGCCCAGCATCTCCCGTCTCTCTTGTTCCCATCCGTTCGTTCTCCTTGGAACGAGCTGGGTGGTaGGGGCACACACCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: WSSPASPVSLVPIRSFSLERAGW*GHTPLI Trigger: GATTAAAGGTGTGTGCCCCCACCACCCAGCTCGTTC...CAAGGAGAACGAACGGATGGGAACAAGAGAGACGGGAGATGCTGGGCTACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTGACATCACTAATCTCACAGAAACCAGGTTGACAGCAGGGCCCCATGACCCCTGCCCTCCATGCTaGCCCAGATGCCTCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: SSDITNLTETRLTAGPHDPCPPC*PRCLQN Trigger: ATTCTGGAGGCATCTGGGTCAGCATGGAGGGCAGGG...GTCATGGGGCCCTGCTGTCAACCTGGTTTCTGTGAGATTAGTGATGTCAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCCACCCTCCTAACTACATGAGCTGCAGAAGAATCCAGAATAAGCTCCCAGCACGTCTCCTTTCCTaGCCTGCCCTCCATGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LCHPPNYMSCRRIQNKLPARLLS*PALHAD Trigger: GTCAGCATGGAGGGCAGGGCAGGAAAGGAGACGTGC...TGGGAGCTTATTCTGGATTCTTCTGCAGCTCATGTAGTTAGGAGGGTGGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGGTTGTAGTTGTAGTACTGTCTGGGTGTGGGTTTTGTTTGCTGGGGAGCGCCAGACCCGAAGGAGGTaGATTGAGGAGGAGGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: EGCSCSTVWVWVLFAGERQTRRR*IEEEEV Trigger: TACTTCCTCCTCCTCAATTCACCTCCTTCGGGTCTG...GCGCTCCCCAGCAAACAAAACCCACACCCAGACAGTACTACAACTACAACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAGTAGCCCAGCATCTCCCGTCTCTCTTGTTCCCATCCGTTCGTTCTCCTTGTGCCTTTATTCTACCTaGCCCAAAGAGATTCAGGCG | + |
|
Preference number: 2 (lower is better) Translates to: WSSPASPVSLVPIRSFSLCLYST*PKEIQA Trigger: CGCCTGAATCTCTTTGGGGCAGGTAGAATAAAGGCA...CAAGGAGAACGAACGGATGGGAACAAGAGAGACGGGAGATGCTGGGCTACTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGAAGCTTTCCTGGAGTAGCCCAGCATCTCCCGTCTCTCTTGTTCCCATCCAGAGATTAGGGCAGTaGTATGTTTTCAAGGCACAT | + |
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Preference number: 2 (lower is better) Translates to: GEKLSWSSPASPVSLVPIQRLGQ*YVFKAH Trigger: ATGTGCCTTGAAAACATATCACTGCCCTAATCTCTG...GATGGGAACAAGAGAGACGGGAGATGCTGGGCTACTCCAGGAAAGCTTCTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTGACATCACTAATCTCACAGAAACCAGGTTGACAGCAGGGCCCCATGACCAAAAGGTTCGGAAGTaGCTGGGGTTTGAGAACTCC | + |
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Preference number: 2 (lower is better) Translates to: SSDITNLTETRLTAGPHDQKVRK*LGFENS Trigger: GGAGTTCTCAAACCCCAGTCACTTCCGAACCTTTTG...GTCATGGGGCCCTGCTGTCAACCTGGTTTCTGTGAGATTAGTGATGTCAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAAGTTCCAGGACAGCCAGGGCTACACCGAGGAGCCCTGTCTTGAAAAACCAGAGATTAGGGCAGTaGTATGTTTTCAAGGCACAT | + |
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Preference number: 2 (lower is better) Translates to: TASSRTARATPRSPVLKNQRLGQ*YVFKAH Trigger: ATGTGCCTTGAAAACATATCACTGCCCTAATCTCTG...GTTTTTCAAGACAGGGCTCCTCGGTGTAGCCCTGGCTGTCCTGGAACTTGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR TCA 90 bp | TATTACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGGACAGCAGGGCCCCATaGCTTCTGCAGCTCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: YYHLGVLRRQEFICSQFWDSRAP*LLQLSE Trigger: CTCTGAGAGCTGCAGAAGTCATGGGGCCCTGCTGTC...CCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGGTCAGACAAAAGGTTCGGAAGTaGCTGGGGTTTGAGAACTCC | + |
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Preference number: 2 (lower is better) Translates to: PWCLKTAGIYLLTILEVRQKVRK*LGFENS Trigger: GGAGTTCTCAAACCCCAGTCACTTCCGAACCTTTTG...TCTGACCTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR CCA 90 bp | TACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGGAGTACTGTCTGGGTGTaGGTTTTGTTTGCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: YHLGVLRRQEFICSQFWRSTVWV*VLFAGE Trigger: CTCCCCAGCAAACAAAACCCACACCCAGACAGTACT...CCTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR CCA 90 bp | TACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGGTGCTTAGCAGAGGAGTaGGTCAAAAGGTTCGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: YHLGVLRRQEFICSQFWRCLAEE*VKRFGS Trigger: ACTTCCGAACCTTTTGACCCACTCCTCTGCTAAGCA...CCTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR CAA 90 bp | TTATTATTATTACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTaGCTCACAATTCTGGAGGTCAGAGTTCTGACATCACTAATCTCA | + |
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Preference number: 2 (lower is better) Translates to: LLLLPPWCLKTAGIY*LTILEVRVLTSLIS Trigger: TGAGATTAGTGATGTCAGAACTCTGACCTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTAATAATAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
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| 3UTR CCA 72 bp | TCGTTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTaGAGTCACAGACACAGTCCCCGGGGCACTGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: SFSLSPAWRGCS*SHRHSPRGTVP Trigger: AGGGACAGTGCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
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| 3UTR CCA 72 bp | CTTGTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATaGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: LVPIRSFSLSPA*RGCSWSHRHSP Trigger: GGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
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| 3UTR TCA 72 bp | ACGAGCTGGGTGGTGGGGGCACACACCTTTAATCCCTaGTGTCTGAGTTCGAGGCCAGCCAGGTCTACACAG | + |
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Preference number: 3 (lower is better) Translates to: TSWVVGAHTFNP*CLSSRPARSTQ Trigger: CTGTGTAGACCTGGCTGGCCTCGAACTCAGACATCAGGGATTAAAGGTGTGTGCCCCCACCACCCAGCTCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR GCA 72 bp | GGAAGTAAGACATTGCAGGAGGCACGTCTCCTTTCCTaGCCTGCCCTCCATGCTGACCCAGATGCCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: GSKTLQEARLLS*PALHADPDASR Trigger: TCTGGAGGCATCTGGGTCAGCATGGAGGGCAGGGCAGGAAAGGAGACGTGCCTCCTGCAATGTCTTACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR TCA 72 bp | CTGGGTGTGGGTTTTGTTTGCTGGGGAGCGCCTCGTTaGGGTAACATCTGGACAGACCCGAAGGAGGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: LGVGFVCWGAPR*GNIWTDPKEVN Trigger: ATTCACCTCCTTCGGGTCTGTCCAGATGTTACCTCAACGAGGCGCTCCCCAGCAAACAAAACCCACACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR GCA 72 bp | CTGCCCTCCATGCTGACCCAGATGCCTCCAGAATCTTaGTTAGCAGAGGAGTGGGTCAAAAGGTTCGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: LPSMLTQMPPES*LAEEWVKRFGS Trigger: ACTTCCGAACCTTTTGACCCACTCCTCTGCTAAGCAAGATTCTGGAGGCATCTGGGTCAGCATGGAGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR CCA 72 bp | AGGCGAGAGGGTTGTAGTTGTAGTACTGTCTGGGTGTaGGTTTTGTTTGCTGGGGAGCGCCTCGTTGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: RREGCSCSTVWV*VLFAGERLVEV Trigger: TACCTCAACGAGGCGCTCCCCAGCAAACAAAACCCACACCCAGACAGTACTACAACTACAACCCTCTCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR TCA 72 bp | ACCTCATTCTGCTGTATAGCTGGAGGCGTAAGCTCATaGTGGTCCCTGTACCTCTGCCACCCTCCTAACTAC | + |
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Preference number: 3 (lower is better) Translates to: TSFCCIAGGVSS*WSLYLCHPPNY Trigger: GTAGTTAGGAGGGTGGCAGAGGTACAGGGACCATCATGAGCTTACGCCTCCAGCTATACAGCAGAATGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR TCA 72 bp | GATGGTCCCTGTACCTCTGCCACCCTCCTAACTACATaGGCTGCAGAAGAATCCAGAATAAGCTCCCATCTC | + |
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Preference number: 3 (lower is better) Translates to: DGPCTSATLLTT*AAEESRISSHL Trigger: GAGATGGGAGCTTATTCTGGATTCTTCTGCAGCTCATGTAGTTAGGAGGGTGGCAGAGGTACAGGGACCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR CCA 72 bp | ACCCAGATGCCTCCAGAATCTTGCTTAGCAGAGGAGTaGGTCAAAAGGTTCGGAAGTGACTGGGGTTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: TQMPPESCLAEE*VKRFGSDWGLR Trigger: TCTCAAACCCCAGTCACTTCCGAACCTTTTGACCCACTCCTCTGCTAAGCAAGATTCTGGAGGCATCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTCTGACATCACTAATCTCACAGAAACCAGGTTGACAGCAGGGCCCCATGACAGTGTCCTCATGGTCTaGGCCTCAAGTACTTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: SSDITNLTETRLTAGPHDSVLMV*ASSTFS Trigger: GGAAAAAGTACTTGAGGCCAAGACCATGAGGACACT...GTCATGGGGCCCTGCTGTCAACCTGGTTTCTGTGAGATTAGTGATGTCAGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR CCA 72 bp | CTCAAGTACTTTTTCCACCTCATTCTGCTGTATAGCTaGAGGCGTAAGCTCATGATGGTCCCTGTACCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LKYFFHLILLYS*RRKLMMVPVPL Trigger: CAGAGGTACAGGGACCATCATGAGCTTACGCCTCCAGCTATACAGCAGAATGAGGTGGAAAAAGTACTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| 3UTR GCA 72 bp | AGAATCCAGAATAAGCTCCCATCTCAGGTCCAGACATaGTGTCATTTTTGTAACGATCACTTGACCAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: RIQNKLPSQVQT*CHFCNDHLTKL Trigger: TAACTTGGTCAAGTGATCGTTACAAAAATGACAGCATGTCTGGACCTGAGATGGGAGCTTATTCTGGATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS-3UTR TCA 90 bp | TTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCAGCTGGCGCACATCCTaGAGCAGCTCTGTGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LSPAWRGCSWSHRHSPRGSWRTS*SSSVAG Trigger: CCCGGCCACAGAGCTGCTTCAGGATGTGCGCCAGCT...GCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS-3UTR CCA 90 bp | GCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCACTGTCCCTCATTTCGTCTTCGATGCCACTaGCGCAGGGAGGCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: AWVLLESQTQSPGHCPSFRLRCH*RREARA Trigger: GGCCCGGGCCTCCCTGCGCCAGTGGCATCGAAGACG...AAATGAGGGACAGTGCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
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| CDS-3UTR CCA 90 bp | GTGGCAGTGGGGAGAAGCTTTCCTGGAGTAGCCCAGCATCTCCCGTCTCTCTTGCCAGGAGACCCGGTGTaGGGTGGGCTTCCTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VAVGRSFPGVAQHLPSLLPGDPV*GGLPGG Trigger: GCCCCCAGGAAGCCCACCCCACACCGGGTCTCCTGG...CAAGAGAGACGGGAGATGCTGGGCTACTCCAGGAAAGCTTCTCCCCACTGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS-3UTR CCA 90 bp | TTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCTGTGGCCGGGTCCCCTaGGCTGTAGGGATTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSPAWRGCSWSHRHSPRGCGRVP*AVGISR Trigger: TCTGGAAATCCCTACAGCCCAGGGGACCCGGCCACA...GCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCTCTTGTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATGGCGTGGGTGCCGTCTTCGATGCCACTaGCGCAGGGAGGCCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSLVPIRSFSLSPAWRGCRLRCH*RREARA Trigger: GGCCCGGGCCTCCCTGCGCCAGTGGCATCGAAGACG...GCACCCACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAACAAGAGAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTGTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGCTGAGCCCCTGGGGTaGACGGCCAGTGTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLFPSVRSPCLPHGVGAPAEPLG*TASVWL Trigger: CAGCCAGACACTGGCCGTGCACCCCAGGGGCTCAGC...AGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAACAAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTGCCCTGTCTGGGCTGTaGGCTGGGCTTGCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPIRSFSLSPAWRGCSWSALSGL*AGLAGA Trigger: TGCACCAGCAAGCCCAGCCCACAGCCCAGACAGGGC...ACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207462.2 |
||
| CDS-3UTR CCA 90 bp | GGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCACTGTCCCTCATTGCCAGAGCACGGATGTaGGCAGTGAGCATATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GVGAPGVTDTVPGALSLIARARM*AVSISS Trigger: CGAGGATATGCTCACTGCCCACATCCGTGCTCTGGC...AATGAGGGACAGTGCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGTTGTAGTTGTAGTACTGTCTGGGTGTGGGTTTTGTTTGCTGGGGAGCGCCCAGGAGACCCGGTGTaGGGTGGGCTTCCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGCSCSTVWVWVLFAGERPGDPV*GGLPGG Trigger: GCCCCCAGGAAGCCCACCCCACACCGGGTCTCCTGG...GCGCTCCCCAGCAAACAAAACCCACACCCAGACAGTACTACAACTACAACCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAGAAGCTTTCCTGGAGTAGCCCAGCATCTCCCGTCTCTCTTGTTCCCATCAGCTGCTCCGGGTCCTaGCCAGAGCACGGATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEKLSWSSPASPVSLVPISCSGS*PEHGCG Trigger: CCCACATCCGTGCTCTGGCCAGGACCCGGAGCAGCT...GATGGGAACAAGAGAGACGGGAGATGCTGGGCTACTCCAGGAAAGCTTCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTGGCATCGGTACTGCCTaGCTACATAGCTGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPIRSFSLSPAWRGCSWSGIGTA*LHSCSG Trigger: CCCGGAGCAGCTATGTAGCCAGGCAGTACCGATGCC...ACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR TCA 90 bp | GCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCACTGTCCCTCATTTCGATGGGGATCTGAGTaGTTATCTCCAGCCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AWVLLESQTQSPGHCPSFRWGSE*LSPAPT Trigger: TGTGGGGGCTGGAGATAATCACTCAGATCCCCATCG...AAATGAGGGACAGTGCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR TCA 90 bp | GCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCACTGTCCCTCATTTAATTCTGGAGGTCAGTaGGGAGCTGGCGCACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AWVLLESQTQSPGHCPSFNSGGQ*GAGAHP Trigger: AGGATGTGCGCCAGCTCCTCACTGACCTCCAGAATT...AAATGAGGGACAGTGCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | TTCGTTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGGGCTGGGCTTGCTGGTaGAGTGTCCGTCTTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FVLLVSRMAWVLLESQTQGWACW*SVRLRC Trigger: GCATCGAAGACGGACACTGCACCAGCAAGCCCAGCC...CTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCGTCTCTCTTGTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATGGCGTGGCTGTGGGCTGGGCTTaGTGGTGCAGTGTCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLFPSVRSPCLPHGVAVGWA*WCSVRL Trigger: AAGACGGACACTGCACCAGCAAGCCCAGCCCACAGC...CACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAACAAGAGAGACGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | TTCGTTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGGCTGTGGGCTGGGCTTaGTGGTGCAGTGTCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FVLLVSRMAWVLLESQTQAVGWA*WCSVRL Trigger: AAGACGGACACTGCACCAGCAAGCCCAGCCCACAGC...CTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTGATGTCTGAGTTCGAGGCCAGCCAGGTCTACACAGCAAGTTCCAGGACAAGCTGCTCCGGGTCCTaGCCAGAGCACGGATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLMSEFEASQVYTASSRTSCSGS*PEHGCG Trigger: CCCACATCCGTGCTCTGGCCAGGACCCGGAGCAGCT...TGTCCTGGAACTTGCTGTGTAGACCTGGCTGGCCTCGAACTCAGACATCAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCGTCTCTCTTGTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATGGCGTGTGTGGCCGGGTCCCCTaGGCTGTAGGGATTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLFPSVRSPCLPHGVCGRVP*AVGISR Trigger: TCTGGAAATCCCTACAGCCCAGGGGACCCGGCCACA...CACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAACAAGAGAGACGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTGATGTCTGAGTTCGAGGCCAGCCAGGTCTACACAGCAAGTTCCAGGACACCTGAAGCAGCTCTGTaGCCGGGTCCCCTGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLMSEFEASQVYTASSRTPEAAL*PGPLGC Trigger: ACAGCCCAGGGGACCCGGCCACAGAGCTGCTTCAGG...TGTCCTGGAACTTGCTGTGTAGACCTGGCTGGCCTCGAACTCAGACATCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCACTGTCCCTCATTTCCTCGCAACTCCCCTaGATCCAAGAGCTCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVGAPGVTDTVPGALSLISSQLP*IQELHK Trigger: CTTATGGAGCTCTTGGATCCAGGGGAGTTGCGAGGA...AATGAGGGACAGTGCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | TTCGTTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGGTGGGCTGGGCTTGCTaGTGCAGTGTCCGTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: FVLLVSRMAWVLLESQTQVGWAC*CSVRLR Trigger: TCGAAGACGGACACTGCACCAGCAAGCCCAGCCCAC...CTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTGATGTCTGAGTTCGAGGCCAGCCAGGTCTACACAGCAAGTTCCAGGACAGGTTGGCCTGGGCTGTaGGCTGGGCTTGCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLMSEFEASQVYTASSRTGWPGL*AGLAGA Trigger: TGCACCAGCAAGCCCAGCCCACAGCCCAGGCCAACC...TGTCCTGGAACTTGCTGTGTAGACCTGGCTGGCCTCGAACTCAGACATCAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CCCGGGGCACTGTCCCTCATTTTATCATCTTCAATGATGGCTGAACGAGCTGGGCCGAGGAGCCCTGTCTaGGCTGTGGGCTGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGALSLILSSSMMAERAGPRSPV*AVGWAC Trigger: GCAAGCCCAGCCCACAGCCCAGACAGGGCTCCTCGG...CCCAGCTCGTTCAGCCATCATTGAAGATGATAAAATGAGGGACAGTGCCCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207462.2 |
||
| CDS-3UTR GCA 90 bp | GGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCACTGTCCCTCATTACTCTCTGTGTCCTCTaGAGTCGAAGAAGTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVGAPGVTDTVPGALSLITLCVL*SRRSGS Trigger: AGAGCCACTTCTTCGACTGCAGAGGACACAGAGAGT...AATGAGGGACAGTGCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | TCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGTCTCTGGCTCTGTTTaGTGTGGAGTCTCTGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPCLPHGVGAPGVTDTVPVSGSV*CGVSVP Trigger: GGGAACAGAGACTCCACAGCAAACAGAGCCAGAGAC...GGGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAGAAGCTTTCCTGGAGTAGCCCAGCATCTCCCGTCTCTCTTGTTCCCATCGGCATCGGTACTGCCTaGCTACATAGCTGCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GEKLSWSSPASPVSLVPIGIGTA*LHSCSG Trigger: CCCGGAGCAGCTATGTAGCCAGGCAGTACCGATGCC...GATGGGAACAAGAGAGACGGGAGATGCTGGGCTACTCCAGGAAAGCTTCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCCGGGGCACTGTCCCTCATTTTCCTCGCAACTCCCCTaGATCCAAGAGCTCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: AWVLLESQTQSPGHCPSFSSQLP*IQELHK Trigger: CTTATGGAGCTCTTGGATCCAGGGGAGTTGCGAGGA...AAATGAGGGACAGTGCCCCGGGGACTGTGTCTGTGACTCCAGGAGCACCCACGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGTCAGAGTTCTGACATCACTAATCTCACAGAAACCAGGTTGACAGCAGGGCGTCTTCGATGCCACTaGCGCAGGGAGGCCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGQSSDITNLTETRLTAGRLRCH*RREARA Trigger: GGCCCGGGCCTCCCTGCGCCAGTGGCATCGAAGACG...CCCTGCTGTCAACCTGGTTTCTGTGAGATTAGTGATGTCAGAACTCTGACCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGGGAGAAGCTTTCCTGGAGTAGCCCAGCATCTCCCGTCTCTCTTGTTCCCGTGGGCTGGGCTTGCTaGTGCAGTGTCCGTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SGEKLSWSSPASPVSLVPVGWAC*CSVRLR Trigger: TCGAAGACGGACACTGCACCAGCAAGCCCAGCCCAC...GGGAACAAGAGAGACGGGAGATGCTGGGCTACTCCAGGAAAGCTTCTCCCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR TCA 90 bp | GAGGAGGAGGAAGTAAGACATTGCAGGAGGCACGTCTCCTTTCCTGCCCTGCCCGCGTCTGCTCCAGGATaGTGCACTTCCTGTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EEEEVRHCRRHVSFPALPASAPG*CTSCPV Trigger: TACTGGACAGGAAGTGCATCATCCTGGAGCAGACGC...GGGCAGGGCAGGAAAGGAGACGTGCCTCCTGCAATGTCTTACTTCCTCCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGGGAGAAGCTTTCCTGGAGTAGCCCAGCATCTCCCGTCTCTCTTGTTCCCAGGTGTCCACCTGGATaGAGCCAAGCCGATGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGEKLSWSSPASPVSLVPRCPPG*SQADGD Trigger: ATCCCCATCGGCTTGGCTGCATCCAGGTGGACACCT...GGGAACAAGAGAGACGGGAGATGCTGGGCTACTCCAGGAAAGCTTCTCCCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGTCCCGACGTCGGGGTCTTTTaGCAGGTAATTCTGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSLSPAWRGCSWSHRHSPDVGVF*QVILEV Trigger: GACCTCCAGAATTACCTGGCAAAAGACCCCGACGTC...GGGACTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTGTACCTCTGCCACCCTCCTAACTACATGAGCTGCAGAAGAATCCAGAATGCTGAGCCCCTGGGGTaGACGGCCAGTGTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLYLCHPPNYMSCRRIQNAEPLG*TASVWL Trigger: CAGCCAGACACTGGCCGTGCACCCCAGGGGCTCAGC...ATTCTGGATTCTTCTGCAGCTCATGTAGTTAGGAGGGTGGCAGAGGTACAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CTCTTGTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGCAAAACGTCCCTGCTaGCTGACAGAAAGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFPSVRSPCLPHGVGAPAKRPC*LTERPG Trigger: TCCTGGCCTTTCTGTCAGCCAGCAGGGACGTTTTGC...AGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAACAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | TCCCGTCTCTCTTGTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATGGCGTGGGCAAAACGTCCCTGCTaGCTGACAGAAAGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRLSCSHPFVLLVSRMAWAKRPC*LTERPG Trigger: TCCTGGCCTTTCTGTCAGCCAGCAGGGACGTTTTGC...CCACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAACAAGAGAGACGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGTTGTAGTTGTAGTACTGTCTGGGTGTGGGTTTTGTTTGCTGGGGAGCGCAAAGGCTGGTTGGCCTaGGCTGTGGGCTGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGCSCSTVWVWVLFAGERKGWLA*AVGWAC Trigger: GCAAGCCCAGCCCACAGCCCAGGCCAACCAGCCTTT...GCGCTCCCCAGCAAACAAAACCCACACCCAGACAGTACTACAACTACAACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTGTCCCCTATTGCCCATaGCTCCTCAAAAGGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VPIRSFSLSPAWRGCSWSVPYCP*LLKRLV Trigger: AACCAGCCTTTTGAGGAGCCATGGGCAATAGGGGAC...ACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | TCCCGTCTCTCTTGTTCCCATCCGTTCGTTCTCCTTGTCTCCCGCATGGCGTGGTTGGCAAAACGTCCCTaGTGGCTGACAGAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRLSCSHPFVLLVSRMAWLAKRP*WLTERP Trigger: TGGCCTTTCTGTCAGCCAGCAGGGACGTTTTGCCAA...CCACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAACAAGAGAGACGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGGGAGAAGCTTTCCTGGAGTAGCCCAGCATCTCCCGTCTCTCTTGTTCCCGTGGGGTGGGCTTCCTaGGGGCTAGACTGTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGEKLSWSSPASPVSLVPVGWAS*GLDCIS Trigger: AGAAATACAGTCTAGCCCCCAGGAAGCCCACCCCAC...GGGAACAAGAGAGACGGGAGATGCTGGGCTACTCCAGGAAAGCTTCTCCCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGTCAGAGTTCTGACATCACTAATCTCACAGAAACCAGGTTGACAGCAGGGGCCTGGGCTGTGGGCTaGGCTTGCTGGTGCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGQSSDITNLTETRLTAGAWAVG*ACWCSV Trigger: GACACTGCACCAGCAAGCCCAGCCCACAGCCCAGGC...CCCTGCTGTCAACCTGGTTTCTGTGAGATTAGTGATGTCAGAACTCTGACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCAAGTTCCAGGACAGCCAGGGCTACACCGAGGAGCCCTGTCTTGAAAAACAATTCTGGAGGTCAGTaGGGAGCTGGCGCACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TASSRTARATPRSPVLKNNSGGQ*GAGAHP Trigger: AGGATGTGCGCCAGCTCCTCACTGACCTCCAGAATT...GTTTTTCAAGACAGGGCTCCTCGGTGTAGCCCTGGCTGTCCTGGAACTTGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | TTCGTTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGACTCTCTGTGTCCTCTaGAGTCGAAGAAGTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FVLLVSRMAWVLLESQTQTLCVL*SRRSGS Trigger: AGAGCCACTTCTTCGACTGCAGAGGACACAGAGAGT...CTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCATCTCAGGTCCAGACATGCTGTCATTTTTGTAACGATCACTTGACCAAGGCTGAGCCCCTGGGGTaGACGGCCAGTGTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSQVQTCCHFCNDHLTKAEPLG*TASVWL Trigger: CAGCCAGACACTGGCCGTGCACCCCAGGGGCTCAGC...CTTGGTCAAGTGATCGTTACAAAAATGACAGCATGTCTGGACCTGAGATGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCACAGTGTCCTCATGGTCTTGGCCTCAAGTACTTTTTCCACCTCATTCAAAGGCTGGTTGGCCTaGGCTGTGGGCTGGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QCHSVLMVLASSTFSTSFKGWLA*AVGWAC Trigger: GCAAGCCCAGCCCACAGCCCAGGCCAACCAGCCTTT...GAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAGGACACTGTGGCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGACATCACTAATCTCACAGAAACCAGGTTGACAGCAGGGCCCCATGACCCTCAAAAGGCTGGTTaGCCTGGGCTGTGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSDITNLTETRLTAGPHDPQKAG*PGLWAG Trigger: CCCAGCCCACAGCCCAGGCCAACCAGCCTTTTGAGG...GTCATGGGGCCCTGCTGTCAACCTGGTTTCTGTGAGATTAGTGATGTCAGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| 3UTR CAA 72 bp | CCTGCCCTCCATGCTGACCCAGATGCCTCCAGAATCTaGCTTAGCAGAGGAGTGGGTCAAAAGGTTCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PALHADPDASRI*LSRGVGQKVRK Trigger: CTTCCGAACCTTTTGACCCACTCCTCTGCTAAGCAAGATTCTGGAGGCATCTGGGTCAGCATGGAGGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR TCA 90 bp | CTCATGGTCTTGGCCTCAAGTACTTTTTCCACCTCATTCTGCTGTATAGCTGGAAGCTGGCGCACATCCTaGAGCAGCTCTGTGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LMVLASSTFSTSFCCIAGSWRTS*SSSVAG Trigger: CCCGGCCACAGAGCTGCTTCAGGATGTGCGCCAGCT...TCCAGCTATACAGCAGAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTGATGTCTGAGTTCGAGGCCAGCCAGGTCTACACAGCAAGTTCCAGGACATTCAACATCAGGACCTaGCCAGGCTCATGTCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLMSEFEASQVYTASSRTFNIRT*PGSCPM Trigger: CATCGGACATGAGCCTGGCCAGGTCCTGATGTTGAA...TGTCCTGGAACTTGCTGTGTAGACCTGGCTGGCCTCGAACTCAGACATCAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGTTGTAGTTGTAGTACTGTCTGGGTGTGGGTTTTGTTTGCTGGGGAGCAGAAAGGCCAGGAGATaGGGACAGTCGGGCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ERVVVVVLSGCGFCLLGSRKARR*GQSGMQ Trigger: CTGCATGCCCGACTGTCCCCATCTCCTGGCCTTTCT...GCTCCCCAGCAAACAAAACCCACACCCAGACAGTACTACAACTACAACCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCTCATGGTCTTGGCCTCAAGTACTTTTTCCACCTCATTCTGCTGTATCCTGAAGCAGCTCTGTaGCCGGGTCCCCTGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QCPHGLGLKYFFHLILLYPEAAL*PGPLGC Trigger: ACAGCCCAGGGGACCCGGCCACAGAGCTGCTTCAGG...ATACAGCAGAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAGGACACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCACCCTCCTAACTACATGAGCTGCAGAAGAATCCAGAATAAGCTCCCAGTGGGCTGGGCTTGCTaGTGCAGTGTCCGTCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LCHPPNYMSCRRIQNKLPVGWAC*CSVRLR Trigger: TCGAAGACGGACACTGCACCAGCAAGCCCAGCCCAC...TGGGAGCTTATTCTGGATTCTTCTGCAGCTCATGTAGTTAGGAGGGTGGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CTCATGGTCTTGGCCTCAAGTACTTTTTCCACCTCATTCTGCTGTATAGCTGGAGGTTGGCCTGGGCTGTaGGCTGGGCTTGCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LMVLASSTFSTSFCCIAGGWPGL*AGLAGA Trigger: TGCACCAGCAAGCCCAGCCCACAGCCCAGGCCAACC...TCCAGCTATACAGCAGAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGACATCACTAATCTCACAGAAACCAGGTTGACAGCAGGGCCCCATGACAACGTCCCTGCTGGCTaGCAGAAAGGCCAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSDITNLTETRLTAGPHDNVPAG*QKGQEM Trigger: CATCTCCTGGCCTTTCTGTCAGCCAGCAGGGACGTT...GTCATGGGGCCCTGCTGTCAACCTGGTTTCTGTGAGATTAGTGATGTCAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGTTGTAGTTGTAGTACTGTCTGGGTGTGGGTTTTGTTTGCTGGGGAGCGACGTCGGGGTCTTTTaGCAGGTAATTCTGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ERVVVVVLSGCGFCLLGSDVGVF*QVILEV Trigger: GACCTCCAGAATTACCTGGCAAAAGACCCCGACGTC...GCTCCCCAGCAAACAAAACCCACACCCAGACAGTACTACAACTACAACCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | CTCATGGTCTTGGCCTCAAGTACTTTTTCCACCTCATTCTGCTGTATAGCTGGAGGCTGGGCTTGCTGGTaGAGTGTCCGTCTTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LMVLASSTFSTSFCCIAGGWACW*SVRLRC Trigger: GCATCGAAGACGGACACTGCACCAGCAAGCCCAGCC...TCCAGCTATACAGCAGAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCCTCATGGTCTTGGCCTCAAGTACTTTTTCCACCTCATTCTGCTGTATGCTGTGGGCTGGGCTTaGTGGTGCAGTGTCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QCPHGLGLKYFFHLILLYAVGWA*WCSVRL Trigger: AAGACGGACACTGCACCAGCAAGCCCAGCCCACAGC...ATACAGCAGAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAGGACACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCACCCTCCTAACTACATGAGCTGCAGAAGAATCCAGAATAAGCTCCCACTGCAGTCGAAGAAGTaGCTCTGTGGTGCTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LCHPPNYMSCRRIQNKLPLQSKK*LCGAED Trigger: GTCCTCAGCACCACAGAGCCACTTCTTCGACTGCAG...TGGGAGCTTATTCTGGATTCTTCTGCAGCTCATGTAGTTAGGAGGGTGGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGACATCACTAATCTCACAGAAACCAGGTTGACAGCAGGGCCCCATGACTGGCTCTGTTTGCTGTaGAGTCTCTGTTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSDITNLTETRLTAGPHDWLCLL*SLCSPA Trigger: GGCTGGGGAACAGAGACTCCACAGCAAACAGAGCCA...GTCATGGGGCCCTGCTGTCAACCTGGTTTCTGTGAGATTAGTGATGTCAGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGTGTCACAGTCACAGATAGGATCAGGATGAAGACACCTTTGGGGACGGTGGCCAGAGCACGGATGTaGGCAGTGAGCATATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSVTVTDRIRMKTPLGTVARARM*AVSISS Trigger: CGAGGATATGCTCACTGCCCACATCCGTGCTCTGGC...CACCGTCCCCAAAGGTGTCTTCATCCTGATCCTATCTGTGACTGTGACACTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | ATCACTAATCTCACAGAAACCAGGTTGACAGCAGGGCCCCATGACTTCTGCAGCTCCTCGCAACTCCCCTaGATCCAAGAGCTCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITNLTETRLTAGPHDFCSSSQLP*IQELHK Trigger: CTTATGGAGCTCTTGGATCCAGGGGAGTTGCGAGGA...GCTGCAGAAGTCATGGGGCCCTGCTGTCAACCTGGTTTCTGTGAGATTAGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CCCGGGGCACTGTCCCTCATTTTATCATCTTCAATGATGGCTGAACGAGCTGGGGAGCCCCAAACCACGTaGTCAGATAATACCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGALSLILSSSMMAERAGEPQTT*SDNTQL Trigger: AAGCTGGGTATTATCTGACCACGTGGTTTGGGGCTC...CCCAGCTCGTTCAGCCATCATTGAAGATGATAAAATGAGGGACAGTGCCCCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | TTACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGGCCTGGGCTGTGGGCTaGGCTTGCTGGTGCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPPWCLKTAGIYLLTILEAWAVG*ACWCSV Trigger: GACACTGCACCAGCAAGCCCAGCCCACAGCCCAGGC...CTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGTGGGGAGAAGCTTTCCTGGAGTAGCCCAGCATCTCCCGTCTCTCTTGGAATTTGATAGGTGTTaGTATCTCCTGAAGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VAVGRSFPGVAQHLPSLLEFDRC*YLLKKV Trigger: GACCTTCTTCAGGAGATATCAACACCTATCAAATTC...CAAGAGAGACGGGAGATGCTGGGCTACTCCAGGAAAGCTTCTCCCCACTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCCTCATGGTCTTGGCCTCAAGTACTTTTTCCACCTCATTCTGCTGTATAGGTGTCCACCTGGATaGAGCCAAGCCGATGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QCPHGLGLKYFFHLILLYRCPPG*SQADGD Trigger: ATCCCCATCGGCTTGGCTGCATCCAGGTGGACACCT...ATACAGCAGAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAGGACACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGTCAGAGTTCTGACATCACTAATCTCACAGAAACCAGGTTGACAGCAGGGTTCAACATCAGGACCTaGCCAGGCTCATGTCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GGQSSDITNLTETRLTAGFNIRT*PGSCPM Trigger: CATCGGACATGAGCCTGGCCAGGTCCTGATGTTGAA...CCCTGCTGTCAACCTGGTTTCTGTGAGATTAGTGATGTCAGAACTCTGACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGGTCAGAGGGGACAGTCGGGCATaGAGAGGTTGGAGGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PWCLKTAGIYLLTILEVRGDSRA*RGWRIP Trigger: TGGAATCCTCCAACCTCTGCATGCCCGACTGTCCCC...TCTGACCTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | TACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGGGGGGACAGTCGGGCATaGAGAGGTTGGAGGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YHLGVLRRQEFICSQFWRGDSRA*RGWRIP Trigger: TGGAATCCTCCAACCTCTGCATGCCCGACTGTCCCC...CCTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCTCATGGTCTTGGCCTCAAGTACTTTTTCCACCTCATTCTGCTGTATGTGGGGTGGGCTTCCTaGGGGCTAGACTGTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QCPHGLGLKYFFHLILLYVGWAS*GLDCIS Trigger: AGAAATACAGTCTAGCCCCCAGGAAGCCCACCCCAC...ATACAGCAGAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAGGACACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | TATTACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGCCTCAAAAGGCTGGTTaGCCTGGGCTGTGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YYHLGVLRRQEFICSQFWPQKAG*PGLWAG Trigger: CCCAGCCCACAGCCCAGGCCAACCAGCCTTTTGAGG...CCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| 3UTR CAA 72 bp | GTCACAGTCACAGATAGGATCAGGATGAAGACACCTTaGGGGACGGTGCCTTTATTCTACCTGCCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTVTDRIRMKTP*GTVPLFYLPQR Trigger: TCTTTGGGGCAGGTAGAATAAAGGCACCGTCCCCAAAGGTGTCTTCATCCTGATCCTATCTGTGACTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR TCA 90 bp | TTACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGAACGTCCCTGCTGGCTaGCAGAAAGGCCAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LPPWCLKTAGIYLLTILENVPAG*QKGQEM Trigger: CATCTCCTGGCCTTTCTGTCAGCCAGCAGGGACGTT...CTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR TCA 90 bp | TACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGGGCGTCTGCTCCAGGATaGTGCACTTCCTGTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YHLGVLRRQEFICSQFWRASAPG*CTSCPV Trigger: TACTGGACAGGAAGTGCATCATCCTGGAGCAGACGC...CCTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | CTCATGGTCTTGGCCTCAAGTACTTTTTCCACCTCATTCTGCTGTATAGCTGGAGTCTCTGGCTCTGTTTaGTGTGGAGTCTCTGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LMVLASSTFSTSFCCIAGVSGSV*CGVSVP Trigger: GGGAACAGAGACTCCACAGCAAACAGAGCCAGAGAC...TCCAGCTATACAGCAGAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR GCA 90 bp | TATTACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGGGCTGGGCTTGCTGGTaGAGTGTCCGTCTTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YYHLGVLRRQEFICSQFWGWACW*SVRLRC Trigger: GCATCGAAGACGGACACTGCACCAGCAAGCCCAGCC...CCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | TACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGGCTGCAGTCGAAGAAGTaGCTCTGTGGTGCTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YHLGVLRRQEFICSQFWRLQSKK*LCGAED Trigger: GTCCTCAGCACCACAGAGCCACTTCTTCGACTGCAG...CCTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCATCTCAGGTCCAGACATGCTGTCATTTTTGTAACGATCACTTGACCAAGGTCCCCTATTGCCCATaGCTCCTCAAAAGGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPSQVQTCCHFCNDHLTKVPYCP*LLKRLV Trigger: AACCAGCCTTTTGAGGAGCCATGGGCAATAGGGGAC...CTTGGTCAAGTGATCGTTACAAAAATGACAGCATGTCTGGACCTGAGATGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR TCA 90 bp | TTACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGCGATGGGGATCTGAGTaGTTATCTCCAGCCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPPWCLKTAGIYLLTILERWGSE*LSPAPT Trigger: TGTGGGGGCTGGAGATAATCACTCAGATCCCCATCG...CTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCATCTCAGGTCCAGACATGCTGTCATTTTTGTAACGATCACTTGACCAAGGAGCCCCAAACCACGTaGTCAGATAATACCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPSQVQTCCHFCNDHLTKEPQTT*SDNTQL Trigger: AAGCTGGGTATTATCTGACCACGTGGTTTGGGGCTC...CTTGGTCAAGTGATCGTTACAAAAATGACAGCATGTCTGGACCTGAGATGGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CTCATGGTCTTGGCCTCAAGTACTTTTTCCACCTCATTCTGCTGTATAGCTGGAGAGCCCCAAACCACGTaGTCAGATAATACCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LMVLASSTFSTSFCCIAGEPQTT*SDNTQL Trigger: AAGCTGGGTATTATCTGACCACGTGGTTTGGGGCTC...TCCAGCTATACAGCAGAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | CTCATGGTCTTGGCCTCAAGTACTTTTTCCACCTCATTCTGCTGTATAGCTGGATTTCTGTCCAGTCTCTaGCTCTGTTTGCTGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LMVLASSTFSTSFCCIAGFLSSL*LCLLWS Trigger: ACTCCACAGCAAACAGAGCCAGAGACTGGACAGAAA...TCCAGCTATACAGCAGAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| 3UTR CAA 72 bp | CCTACTATGTTTCAGTGCCACAGTGTCCTCATGGTCTaGGCCTCAAGTACTTTTTCCACCTCATTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTMFQCHSVLMV*ASSTFSTSFCC Trigger: ACAGCAGAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAGGACACTGTGGCACTGAAACATAGTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | TTATTACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGTGGCTCTGTTTGCTGTaGAGTCTCTGTTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPPWCLKTAGIYLLTILWLCLL*SLCSPA Trigger: GGCTGGGGAACAGAGACTCCACAGCAAACAGAGCCA...CAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CCA 90 bp | TTACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGTTTCTGTCCAGTCTCTaGCTCTGTTTGCTGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPWCLKTAGIYLLTILEFLSSL*LCLLWS Trigger: ACTCCACAGCAAACAGAGCCAGAGACTGGACAGAAA...CTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS GCA 90 bp | GCCTGGGCTGTGGGCTGGGCTTGCTGGTGCAGTGTCCGTCTTCGATaGCACTGGCGCAGGGAGGCCCGGGCCTCGGAGCTGAGCCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AWAVGWACWCSVRLR*HWRREARASELSPW Trigger: CCAGGGGCTCAGCTCCGAGGCCCGGGCCTCCCTGCGCCAGTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS GCA 90 bp | GGGGCTCTTTATTCTCGCCACCGCCTAGGCCCGCGTAGACGTCGCTaGACACCGCCAGCAACAGCGCCACCTTGCGGCGCGGGGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: GALYSRHRLGPRRRR*TPPATAPPCGAGRT Trigger: CGTGCGCCCCGCGCCGCAAGGTGGCGCTGTTGCTGGCGGTGTGCAGCGACGTCTACGCGGGCCTAGGCGGTGGCGAGAATAAAGAGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS TCA 90 bp | AGCAACAGCGCCACCTTGCGGCGCGGGGCGCACGCCGCATGCAAGTaGGCAAGGCGTGCGTGGATACGGTTCCGGTTCCGCAAGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SNSATLRRGAHAACK*ARRAWIRFRFRKAG Trigger: CCCGGCCTTGCGGAACCGGAACCGTATCCACGCACGCCTTGCTCACTTGCATGCGGCGTGCGCCCCGCGCCGCAAGGTGGCGCTGTTGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS GCA 90 bp | CACCTTGCGGCGCGGGGCGCACGCCGCATGCAAGTGAGCAAGGCGTaGGTGGATACGGTTCCGGTTCCGCAAGGCCGGGCTCTGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLAARGARRMQVSKA*VDTVPVPQGRALSL Trigger: GAGGGACAGAGCCCGGCCTTGCGGAACCGGAACCGTATCCACGCACGCCTTGCTCACTTGCATGCGGCGTGCGCCCCGCGCCGCAAGGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS GCA 90 bp | GCTACACCGAGGAGCCCTGTCTGGGCTGTGGGCTGGGCTTGCTGGTaGAGTGTCCGTCTTCGATGCCACTGGCGCAGGGAGGCCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ATPRSPVWAVGWACW*SVRLRCHWRREARA Trigger: GGCCCGGGCCTCCCTGCGCCAGTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGACAGGGCTCCTCGGTGTAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207462.2 |
||
| CDS CCA 90 bp | AGGGCTACACCGAGGAGCCCTGTCTGGGCTGTGGGCTGGGCTTGCTaGTGCAGTGTCCGTCTTCGATGCCACTGGCGCAGGGAGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RATPRSPVWAVGWAC*CSVRLRCHWRREAR Trigger: CCGGGCCTCCCTGCGCCAGTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGACAGGGCTCCTCGGTGTAGCCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207462.2 |
||
| CDS GCA 90 bp | TCCTCAAAAGGCTGGTTGGCCTGGGCTGTGGGCTGGGCTTGCTGGTaGAGTGTCCGTCTTCGATGCCACTGGCGCAGGGAGGCCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSKGWLAWAVGWACW*SVRLRCHWRREARA Trigger: GGCCCGGGCCTCCCTGCGCCAGTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGGCCAACCAGCCTTTTGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS CCA 90 bp | GGCTCCTCAAAAGGCTGGTTGGCCTGGGCTGTGGGCTGGGCTTGCTaGTGCAGTGTCCGTCTTCGATGCCACTGGCGCAGGGAGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSKGWLAWAVGWAC*CSVRLRCHWRREAR Trigger: CCGGGCCTCCCTGCGCCAGTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGGCCAACCAGCCTTTTGAGGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS GCA 90 bp | CATGGCTCCTCAAAAGGCTGGTTGGCCTGGGCTGTGGGCTGGGCTTaGTGGTGCAGTGTCCGTCTTCGATGCCACTGGCGCAGGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HGSSKGWLAWAVGWA*WCSVRLRCHWRREA Trigger: GGCCTCCCTGCGCCAGTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGGCCAACCAGCCTTTTGAGGAGCCATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGTGTGGGTTTTGTTTGCTGGGGAGCGCCTCGTTGAGGTAACATCTGGAAGCAACAGCGCCACCTaGCGGCGCGGGGCGCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: VWVWVLFAGERLVEVTSGSNSAT*RRGAHA Trigger: GGCGTGCGCCCCGCGCCGCAAGGTGGCGCTGTTGCT...TCCAGATGTTACCTCAACGAGGCGCTCCCCAGCAAACAAAACCCACACCCAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS CCA 90 bp | ATTGCCCATGGCTCCTCAAAAGGCTGGTTGGCCTGGGCTGTGGGCTaGGCTTGCTGGTGCAGTGTCCGTCTTCGATGCCACTGGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IAHGSSKGWLAWAVG*ACWCSVRLRCHWRR Trigger: CCTGCGCCAGTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGGCCAACCAGCCTTTTGAGGAGCCATGGGCAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | TTCGTTCTCCTTGTCTCCCGCATGGCGTGGGTGCTCCTGGAGTCACAGACACAGGGCTGTGGGCTGGGCTaGCTGGTGCAGTGTCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FVLLVSRMAWVLLESQTQGCGLG*LVQCPS Trigger: AGACGGACACTGCACCAGCAAGCCCAGCCCACAGCC...CTGTGTCTGTGACTCCAGGAGCACCCACGCCATGCGGGAGACAAGGAGAACGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS TCA 90 bp | CTGTGGCCGGGTCCCCTGGGCTGTAGGGATTTCCAGAATCTGAGATaGGGCGTGCCCGAAGGCATCGGTACTGCCTGGCTACATAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LWPGPLGCRDFQNLR*GVPEGIGTAWLHSC Trigger: GCAGCTATGTAGCCAGGCAGTACCGATGCCTTCGGGCACGCCTCATCTCAGATTCTGGAAATCCCTACAGCCCAGGGGACCCGGCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS CCA 90 bp | CCTACCCTCAAGGCTATTTGGCGCCTGCGCAGTCGTCGTAGTTCCTaGGCTCTGAGAGTTCGGAGTTTGGTCCACAGGGCGGGCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTLKAIWRLRSRRSS*ALRVRSLVHRAGFR Trigger: CCTGAAGCCCGCCCTGTGGACCAAACTCCGAACTCTCAGAGCCCAGGAACTACGACGACTGCGCAGGCGCCAAATAGCCTTGAGGGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGTGGGGAGAAGCTTTCCTGGAGTAGCCCAGCATCTCCCGTCTCTCTTGTCCTCAAAAGGCTGGTaGGCCTGGGCTGTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VAVGRSFPGVAQHLPSLLSSKGW*AWAVGW Trigger: CCAGCCCACAGCCCAGGCCAACCAGCCTTTTGAGGA...CAAGAGAGACGGGAGATGCTGGGCTACTCCAGGAAAGCTTCTCCCCACTGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS TCA 90 bp | AGGAAGCTCCCCAGTGGCCACAGCTCTAGAAAGGCCTTGGCATACTaGGCATCCAGCTCGGGGACCTCCCACACTCTCTGTGTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RKLPSGHSSRKALAY*ASSSGTSHTLCVLC Trigger: GCAGAGGACACAGAGAGTGTGGGAGGTCCCCGAGCTGGATGCTCAGTATGCCAAGGCCTTTCTAGAGCTGTGGCCACTGGGGAGCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS TCA 90 bp | CAGCTCTGTGGCCGGGTCCCCTGGGCTGTAGGGATTTCCAGAATCTaGGATGAGGCGTGCCCGAAGGCATCGGTACTGCCTGGCTACATA | + |
|
Preference number: 5 (lower is better) Translates to: QLCGRVPWAVGISRI*DEACPKASVLPGYI Trigger: TATGTAGCCAGGCAGTACCGATGCCTTCGGGCACGCCTCATCTCAGATTCTGGAAATCCCTACAGCCCAGGGGACCCGGCCACAGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS TCA 90 bp | TCAAGGCTATTTGGCGCCTGCGCAGTCGTCGTAGTTCCTGGGCTCTaGGAGTTCGGAGTTTGGTCCACAGGGCGGGCTTCAGGGGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SRLFGACAVVVVPGL*EFGVWSTGRASGAL Trigger: TAGAGCCCCTGAAGCCCGCCCTGTGGACCAAACTCCGAACTCTCAGAGCCCAGGAACTACGACGACTGCGCAGGCGCCAAATAGCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS GCA 90 bp | CCCTGCTGGCTGACAGAAAGGCCAGGAGATGGGGACAGTCGGGCATaGAGAGGTTGGAGGATTCCAGGGACACACCTCCAGGAAACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PCWLTERPGDGDSRA*RGWRIPGTHLQETS Trigger: AGAGGTTTCCTGGAGGTGTGTCCCTGGAATCCTCCAACCTCTGCATGCCCGACTGTCCCCATCTCCTGGCCTTTCTGTCAGCCAGCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGTAGCCCAGCATCTCCCGTCTCTCTTGTTCCCATCCGTTCGTTCTCCTTGGGCTGTGGGCTGGGCTaGCTGGTGCAGTGTCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WSSPASPVSLVPIRSFSLGCGLG*LVQCPS Trigger: AGACGGACACTGCACCAGCAAGCCCAGCCCACAGCC...CAAGGAGAACGAACGGATGGGAACAAGAGAGACGGGAGATGCTGGGCTACTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS TCA 90 bp | ACACTCTCTGTGTCCTCTGCAGTCGAAGAAGTGGCTCTGTGGTGCTaGGGACCCCTAGTGGGCTCTTGTCTGCTCCATCCGCTAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSVSSAVEEVALWC*GPLVGSCLLHPLVA Trigger: GGCCACTAGCGGATGGAGCAGACAAGAGCCCACTAGGGGTCCTCAGCACCACAGAGCCACTTCTTCGACTGCAGAGGACACAGAGAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS TCA 90 bp | AAGGTCCTGCCTTCAACATCAGGACCTGGCCAGGCTCATGTCCGATaGCCAGGAAGCTCCCCAGTGGCCACAGCTCTAGAAAGGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KVLPSTSGPGQAHVR*PGSSPVATALERPW Trigger: CCAAGGCCTTTCTAGAGCTGTGGCCACTGGGGAGCTTCCTGGTCATCGGACATGAGCCTGGCCAGGTCCTGATGTTGAAGGCAGGACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS CCA 90 bp | GTCCTTGGCAAAACGTCCCTGCTGGCTGACAGAAAGGCCAGGAGATaGGGACAGTCGGGCATGCAGAGGTTGGAGGATTCCAGGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: VLGKTSLLADRKARR*GQSGMQRLEDSRDT Trigger: TGTGTCCCTGGAATCCTCCAACCTCTGCATGCCCGACTGTCCCCATCTCCTGGCCTTTCTGTCAGCCAGCAGGGACGTTTTGCCAAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | CCCGGGGCACTGTCCCTCATTTTATCATCTTCAATGATGGCTGAACGAGCTGGGGGCTGTGGGCTGGGCTaGCTGGTGCAGTGTCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGALSLILSSSMMAERAGGCGLG*LVQCPS Trigger: AGACGGACACTGCACCAGCAAGCCCAGCCCACAGCC...CCCAGCTCGTTCAGCCATCATTGAAGATGATAAAATGAGGGACAGTGCCCCGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGTTGTAGTTGTAGTACTGTCTGGGTGTGGGTTTTGTTTGCTGGGGAGCGCTCCTCAAAAGGCTGGTaGGCCTGGGCTGTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EGCSCSTVWVWVLFAGERSSKGW*AWAVGW Trigger: CCAGCCCACAGCCCAGGCCAACCAGCCTTTTGAGGA...GCGCTCCCCAGCAAACAAAACCCACACCCAGACAGTACTACAACTACAACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS CCA 90 bp | GTGTTGATATCTCCTGAAGAAGGTCCTGCCTTCAACATCAGGACCTaGCCAGGCTCATGTCCGATGACCAGGAAGCTCCCCAGTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLISPEEGPAFNIRT*PGSCPMTRKLPSGH Trigger: GTGGCCACTGGGGAGCTTCCTGGTCATCGGACATGAGCCTGGCCAGGTCCTGATGTTGAAGGCAGGACCTTCTTCAGGAGATATCAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGTGTGGGTTTTGTTTGCTGGGGAGCGCCTCGTTGAGGTAACATCTGGATCGGGCATGCAGAGGTaGGAGGATTCCAGGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: VWVWVLFAGERLVEVTSGSGMQR*EDSRDT Trigger: TGTGTCCCTGGAATCCTCCAACCTCTGCATGCCCGA...TCCAGATGTTACCTCAACGAGGCGCTCCCCAGCAAACAAAACCCACACCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | CAGACATGCTGTCATTTTTGTAACGATCACTTGACCAAGTTAAGTGTCACAGTCAGCAACAGCGCCACCTaGCGGCGCGGGGCGCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: QTCCHFCNDHLTKLSVTVSNSAT*RRGAHA Trigger: GGCGTGCGCCCCGCGCCGCAAGGTGGCGCTGTTGCT...GACTGTGACACTTAACTTGGTCAAGTGATCGTTACAAAAATGACAGCATGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS CCA 90 bp | TGTCTGGCTGGTAGTGAGCAATGTGGTAGAGAGCCCCAAACCACGTaGTCAGATAATACCCAGCTTCTCCTCGCAACTCCCCTGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLAGSEQCGREPQTT*SDNTQLLLATPLDP Trigger: TGGATCCAGGGGAGTTGCGAGGAGAAGCTGGGTATTATCTGACCACGTGGTTTGGGGCTCTCTACCACATTGCTCACTACCAGCCAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | GCACTGTCCCTCATTTTATCATCTTCAATGATGGCTGAACGAGCTGGGTGGTGGGCAAGAGCAGGGTCCTaGGCAAAACGTCCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALSLILSSSMMAERAGWWARAGS*AKRPCW Trigger: CCAGCAGGGACGTTTTGCCAAGGACCCTGCTCTTGC...CCACCACCCAGCTCGTTCAGCCATCATTGAAGATGATAAAATGAGGGACAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGTCAGAGTTCTGACATCACTAATCTCACAGAAACCAGGTTGACAGCAGGGCTGAGAGTTCGGAGTTaGGTCCACAGGGCGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGQSSDITNLTETRLTAGLRVRS*VHRAGF Trigger: GAAGCCCGCCCTGTGGACCAAACTCCGAACTCTCAG...CCCTGCTGTCAACCTGGTTTCTGTGAGATTAGTGATGTCAGAACTCTGACCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | CAGTGCCACAGTGTCCTCATGGTCTTGGCCTCAAGTACTTTTTCCACCTCATTCCTGAGAGTTCGGAGTTaGGTCCACAGGGCGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QCHSVLMVLASSTFSTSFLRVRS*VHRAGF Trigger: GAAGCCCGCCCTGTGGACCAAACTCCGAACTCTCAG...GAATGAGGTGGAAAAAGTACTTGAGGCCAAGACCATGAGGACACTGTGGCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCATCTCAGGTCCAGACATGCTGTCATTTTTGTAACGATCACTTGACCAAGTCGGGCATGCAGAGGTaGGAGGATTCCAGGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: LPSQVQTCCHFCNDHLTKSGMQR*EDSRDT Trigger: TGTGTCCCTGGAATCCTCCAACCTCTGCATGCCCGA...CTTGGTCAAGTGATCGTTACAAAAATGACAGCATGTCTGGACCTGAGATGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS-3UTR CAA 90 bp | TTACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGGCAAGAGCAGGGTCCTaGGCAAAACGTCCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPPWCLKTAGIYLLTILEARAGS*AKRPCW Trigger: CCAGCAGGGACGTTTTGCCAAGGACCCTGCTCTTGC...CTCCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS TCA 90 bp | ATTCCAGGGACACACCTCCAGGAAACCTCTGAATTTGATAGGTGTTaGTATCTCCTGAAGAAGGTCCTGCCTTCAACATCAGGACCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IPGTHLQETSEFDRC*YLLKKVLPSTSGPG Trigger: GCCAGGTCCTGATGTTGAAGGCAGGACCTTCTTCAGGAGATATCAACACCTATCAAATTCAGAGGTTTCCTGGAGGTGTGTCCCTGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS-3UTR CAA 90 bp | TATTACCACCTTGGTGTCTTAAGACGGCAGGAATTTATTTGCTCACAATTCTGGAGTCTCTGGCTCTGTTaGCTGTGGAGTCTCTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YYHLGVLRRQEFICSQFWSLWLC*LWSLCS Trigger: GGAACAGAGACTCCACAGCAAACAGAGCCAGAGACT...CCAGAATTGTGAGCAAATAAATTCCTGCCGTCTTAAGACACCAAGGTGGTAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS TCA 72 bp | GCCACCTTGCGGCGCGGGGCGCACGCCGCATGCAAGTaGGCAAGGCGTGCGTGGATACGGTTCCGGTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ATLRRGAHAACK*ARRAWIRFRFR Trigger: GCGGAACCGGAACCGTATCCACGCACGCCTTGCTCACTTGCATGCGGCGTGCGCCCCGCGCCGCAAGGTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS GCA 72 bp | GCGCGGGGCGCACGCCGCATGCAAGTGAGCAAGGCGTaGGTGGATACGGTTCCGGTTCCGCAAGGCCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARGARRMQVSKA*VDTVPVPQGRA Trigger: AGCCCGGCCTTGCGGAACCGGAACCGTATCCACGCACGCCTTGCTCACTTGCATGCGGCGTGCGCCCCGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS GCA 72 bp | TATTCTCGCCACCGCCTAGGCCCGCGTAGACGTCGCTaGACACCGCCAGCAACAGCGCCACCTTGCGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: YSRHRLGPRRRR*TPPATAPPCGA Trigger: CGCGCCGCAAGGTGGCGCTGTTGCTGGCGGTGTGCAGCGACGTCTACGCGGGCCTAGGCGGTGGCGAGAATA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS GCA 72 bp | GGCTGGTTGGCCTGGGCTGTGGGCTGGGCTTGCTGGTaGAGTGTCCGTCTTCGATGCCACTGGCGCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GWLAWAVGWACW*SVRLRCHWRRE Trigger: CTCCCTGCGCCAGTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGGCCAACCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS CCA 72 bp | CCGAGGAGCCCTGTCTGGGCTGTGGGCTGGGCTTGCTaGTGCAGTGTCCGTCTTCGATGCCACTGGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRSPVWAVGWAC*CSVRLRCHWRR Trigger: CCTGCGCCAGTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGACAGGGCTCCTCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207462.2 |
||
| CDS GCA 72 bp | AGGAGCCCTGTCTGGGCTGTGGGCTGGGCTTGCTGGTaGAGTGTCCGTCTTCGATGCCACTGGCGCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSPVWAVGWACW*SVRLRCHWRRE Trigger: CTCCCTGCGCCAGTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGACAGGGCTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207462.2 |
||
| CDS CCA 72 bp | TCCAGGACAGCCAGGGCTACACCGAGGAGCCCTGTCTaGGCTGTGGGCTGGGCTTGCTGGTGCAGTGTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SRTARATPRSPV*AVGWACWCSVR Trigger: ACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGACAGGGCTCCTCGGTGTAGCCCTGGCTGTCCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207462.2 |
||
| CDS CAA 90 bp | CCATGGCTCCTCAAAAGGCTGGTTGGCCTGGGCTGTGGGCTGGGCTaGCTGGTGCAGTGTCCGTCTTCGATGCCACTGGCGCAGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PWLLKRLVGLGCGLG*LVQCPSSMPLAQGG Trigger: GCCTCCCTGCGCCAGTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGGCCAACCAGCCTTTTGAGGAGCCATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS GCA 72 bp | GTGCCCGAAGGCATCGGTACTGCCTGGCTACATAGCTaGTCCGGGTCCTGGCCAGAGCACGGATGTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VPEGIGTAWLHS*SGSWPEHGCGQ Trigger: CTGCCCACATCCGTGCTCTGGCCAGGACCCGGAGCAGCTATGTAGCCAGGCAGTACCGATGCCTTCGGGCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS CCA 72 bp | AAAGGCTGGTTGGCCTGGGCTGTGGGCTGGGCTTGCTaGTGCAGTGTCCGTCTTCGATGCCACTGGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KGWLAWAVGWAC*CSVRLRCHWRR Trigger: CCTGCGCCAGTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGGCCAACCAGCCTTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS CCA 72 bp | AGGGCTACACCGAGGAGCCCTGTCTGGGCTGTGGGCTaGGCTTGCTGGTGCAGTGTCCGTCTTCGATGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RATPRSPVWAVG*ACWCSVRLRCH Trigger: GTGGCATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGACAGGGCTCCTCGGTGTAGCCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207462.2 |
||
| CDS CCA 72 bp | CAGCCAGGGCTACACCGAGGAGCCCTGTCTGGGCTGTaGGCTGGGCTTGCTGGTGCAGTGTCCGTCTTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: QPGLHRGALSGL*AGLAGAVSVFD Trigger: ATCGAAGACGGACACTGCACCAGCAAGCCCAGCCCACAGCCCAGACAGGGCTCCTCGGTGTAGCCCTGGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207462.2 |
||
| CDS CAA 90 bp | CGCCTGCGCAGTCGTCGTAGTTCCTGGGCTCTGAGAGTTCGGAGTTaGGTCCACAGGGCGGGCTTCAGGGGCTCTAGAACCGCTCGACAC | + |
|
Preference number: 6 (lower is better) Translates to: RLRSRRSSWALRVRS*VHRAGFRGSRTARH Trigger: GTGTCGAGCGGTTCTAGAGCCCCTGAAGCCCGCCCTGTGGACCAAACTCCGAACTCTCAGAGCCCAGGAACTACGACGACTGCGCAGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS TCA 72 bp | GGCCGGGTCCCCTGGGCTGTAGGGATTTCCAGAATCTaGGATGAGGCGTGCCCGAAGGCATCGGTACTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRVPWAVGISRI*DEACPKASVLP Trigger: AGGCAGTACCGATGCCTTCGGGCACGCCTCATCTCAGATTCTGGAAATCCCTACAGCCCAGGGGACCCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS TCA 72 bp | GGTGTCCACCTGGATGCAGCCAAGCCGATGGGGATCTaGGTGATTATCTCCAGCCCCCACAGTAGGCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GVHLDAAKPMGI*VIISSPHSRRG Trigger: CCCACGCCTACTGTGGGGGCTGGAGATAATCACTCAGATCCCCATCGGCTTGGCTGCATCCAGGTGGACACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
||
| CDS GCA 72 bp | TCCAGCTCGGGGACCTCCCACACTCTCTGTGTCCTCTaGAGTCGAAGAAGTGGCTCTGTGGTGCTGAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SSSGTSHTLCVL*SRRSGSVVLRT Trigger: GGTCCTCAGCACCACAGAGCCACTTCTTCGACTGCAGAGGACACAGAGAGTGTGGGAGGTCCCCGAGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS CCA 72 bp | GGAAGCTCCCCAGTGGCCACAGCTCTAGAAAGGCCTTaGCATACTGAGCATCCAGCTCGGGGACCTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: GSSPVATALERP*HTEHPARGPPT Trigger: TGTGGGAGGTCCCCGAGCTGGATGCTCAGTATGCCAAGGCCTTTCTAGAGCTGTGGCCACTGGGGAGCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS TCA 72 bp | GTGTCCTCTGCAGTCGAAGAAGTGGCTCTGTGGTGCTaGGGACCCCTAGTGGGCTCTTGTCTGCTCCATCCG | + |
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Preference number: 6 (lower is better) Translates to: VSSAVEEVALWC*GPLVGSCLLHP Trigger: CGGATGGAGCAGACAAGAGCCCACTAGGGGTCCTCAGCACCACAGAGCCACTTCTTCGACTGCAGAGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS TCA 72 bp | CCCAGTGGCCACAGCTCTAGAAAGGCCTTGGCATACTaGGCATCCAGCTCGGGGACCTCCCACACTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: PSGHSSRKALAY*ASSSGTSHTLC Trigger: ACAGAGAGTGTGGGAGGTCCCCGAGCTGGATGCTCAGTATGCCAAGGCCTTTCTAGAGCTGTGGCCACTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS TCA 72 bp | GGTCCCCTGGGCTGTAGGGATTTCCAGAATCTGAGATaGGGCGTGCCCGAAGGCATCGGTACTGCCTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: GPLGCRDFQNLR*GVPEGIGTAWL Trigger: TAGCCAGGCAGTACCGATGCCTTCGGGCACGCCTCATCTCAGATTCTGGAAATCCCTACAGCCCAGGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS GCA 72 bp | CTGACAGAAAGGCCAGGAGATGGGGACAGTCGGGCATaGAGAGGTTGGAGGATTCCAGGGACACACCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LTERPGDGDSRA*RGWRIPGTHLQ Trigger: CTGGAGGTGTGTCCCTGGAATCCTCCAACCTCTGCATGCCCGACTGTCCCCATCTCCTGGCCTTTCTGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS CAA 72 bp | AGTCGTCGTAGTTCCTGGGCTCTGAGAGTTCGGAGTTaGGTCCACAGGGCGGGCTTCAGGGGCTCTAGAACC | + |
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Preference number: 6 (lower is better) Translates to: SRRSSWALRVRS*VHRAGFRGSRT Trigger: GGTTCTAGAGCCCCTGAAGCCCGCCCTGTGGACCAAACTCCGAACTCTCAGAGCCCAGGAACTACGACGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS CAA 90 bp | AGTCGAAGAAGTGGCTCTGTGGTGCTGAGGACCCCTAGTGGGCTCTaGTCTGCTCCATCCGCTAGTGGCCAAACCAGCCTGTCCACTTCA | + |
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Preference number: 6 (lower is better) Translates to: SRRSGSVVLRTPSGL*SAPSASGQTSLSTS Trigger: TGAAGTGGACAGGCTGGTTTGGCCACTAGCGGATGGAGCAGACAAGAGCCCACTAGGGGTCCTCAGCACCACAGAGCCACTTCTTCGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS TCA 72 bp | CCTTCAACATCAGGACCTGGCCAGGCTCATGTCCGATaGCCAGGAAGCTCCCCAGTGGCCACAGCTCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: PSTSGPGQAHVR*PGSSPVATALE Trigger: TTCTAGAGCTGTGGCCACTGGGGAGCTTCCTGGTCATCGGACATGAGCCTGGCCAGGTCCTGATGTTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS CCA 72 bp | TCTCCTGAAGAAGGTCCTGCCTTCAACATCAGGACCTaGCCAGGCTCATGTCCGATGACCAGGAAGCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SPEEGPAFNIRT*PGSCPMTRKLP Trigger: GGGGAGCTTCCTGGTCATCGGACATGAGCCTGGCCAGGTCCTGATGTTGAAGGCAGGACCTTCTTCAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS CCA 72 bp | AAAACGTCCCTGCTGGCTGACAGAAAGGCCAGGAGATaGGGACAGTCGGGCATGCAGAGGTTGGAGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: KTSLLADRKARR*GQSGMQRLEDS Trigger: GGAATCCTCCAACCTCTGCATGCCCGACTGTCCCCATCTCCTGGCCTTTCTGTCAGCCAGCAGGGACGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS GCA 72 bp | GGAAAAGTGCACTTCCGACCCAAGGGAGTGAGCGTCTaGTCCAGGATGATGCACTTCCTGTCCAGTATGGTG | + |
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Preference number: 6 (lower is better) Translates to: GKVHFRPKGVSV*SRMMHFLSSMV Trigger: CACCATACTGGACAGGAAGTGCATCATCCTGGAGCAGACGCTCACTCCCTTGGGTCGGAAGTGCACTTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS CCA 72 bp | GGTAGTGAGCAATGTGGTAGAGAGCCCCAAACCACGTaGTCAGATAATACCCAGCTTCTCCTCGCAACTCCC | + |
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Preference number: 6 (lower is better) Translates to: GSEQCGREPQTT*SDNTQLLLATP Trigger: GGGAGTTGCGAGGAGAAGCTGGGTATTATCTGACCACGTGGTTTGGGGCTCTCTACCACATTGCTCACTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
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| CDS GCA 72 bp | GCTAGACTGTATTTCTGTCCAGTCTCTGGCTCTGTTTaGTGTGGAGTCTCTGTTCCCCAGCCTCCATGTGTC | + |
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Preference number: 6 (lower is better) Translates to: ARLYFCPVSGSV*CGVSVPQPPCV Trigger: GACACATGGAGGCTGGGGAACAGAGACTCCACAGCAAACAGAGCCAGAGACTGGACAGAAATACAGTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS CCA 72 bp | GGTCAGATAATACCCAGCTTCTCCTCGCAACTCCCCTaGATCCAAGAGCTCCATAAGAAACTCCACATCCAG | + |
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Preference number: 6 (lower is better) Translates to: GQIIPSFSSQLP*IQELHKKLHIQ Trigger: CTGGATGTGGAGTTTCTTATGGAGCTCTTGGATCCAGGGGAGTTGCGAGGAGAAGCTGGGTATTATCTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059857.8 ENSMUST00000207462.2 ENSMUST00000209035.2 |
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| CDS TCA 72 bp | AGGAAACCTCTGAATTTGATAGGTGTTGATATCTCCTaGAGAAGGTCCTGCCTTCAACATCAGGACCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RKPLNLIGVDIS*RRSCLQHQDLA Trigger: GGCCAGGTCCTGATGTTGAAGGCAGGACCTTCTTCAGGAGATATCAACACCTATCAAATTCAGAGGTTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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| CDS TCA 72 bp | ACACACCTCCAGGAAACCTCTGAATTTGATAGGTGTTaGTATCTCCTGAAGAAGGTCCTGCCTTCAACATCA | + |
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Preference number: 6 (lower is better) Translates to: THLQETSEFDRC*YLLKKVLPSTS Trigger: TGATGTTGAAGGCAGGACCTTCTTCAGGAGATATCAACACCTATCAAATTCAGAGGTTTCCTGGAGGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059857.8 ENSMUST00000209035.2 |
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