Pregenerated sensors for RIN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044456Ensembl transcript IDs: ENSMUST00000056950.14, ENSMUST00000101114.11, ENSMUST00000133820.2, ENSMUST00000150795.8
Found 428 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TTTGTGAAACAATGGCAGGGTCGGGGTGGGGCTAGAAGCGGAGCCTaGTGGACTCAGACTCGGAGGACTCAGAAGCCGGGCTCAGAGCGG | + |
Preference number: 1 (lower is better) Translates to: FVKQWQGRGGARSGA*WTQTRRTQKPGSER Trigger: CCGCTCTGAGCCCGGCTTCTGAGTCCTCCGAGTCTGAGTCCACCAGGCTCCGCTTCTAGCCCCACCCCGACCCTGCCATTGTTTCACAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR GCA 90 bp | GTGGACTCAGACTCGGAGGACTCAGAAGCCGGGCTCAGAGCGGCTTaGAGAACACAGAAGGCTGCAGAGCAGAGCAGAGGCTGTTGCTCA | + |
Preference number: 1 (lower is better) Translates to: VDSDSEDSEAGLRAA*RTQKAAEQSRGCCS Trigger: TGAGCAACAGCCTCTGCTCTGCTCTGCAGCCTTCTGTGTTCTGCAAGCCGCTCTGAGCCCGGCTTCTGAGTCCTCCGAGTCTGAGTCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR TCA 90 bp | CAGGCACCTAGATGGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATaGGAGCCCAGTCCCAATCCCTCTAGCCTCCTCTCAGGAGATCCT | + |
Preference number: 1 (lower is better) Translates to: QAPRWQGCVVKESGQ*EPSPNPSSLLSGDP Trigger: AGGATCTCCTGAGAGGAGGCTAGAGGGATTGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCCATCTAGGTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR GCA 90 bp | GGAGAATTGCCTGAGGAACCTGGTGTGAGCAGGGTTGGGCTTGTTTaGTGCAGCTGGCAAGAGCCTCTTCCACCTGAGCCTTGGTTTCCC | + |
Preference number: 1 (lower is better) Translates to: GELPEEPGVSRVGLV*CSWQEPLPPEPWFP Trigger: GGGAAACCAAGGCTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCACACCAGGTTCCTCAGGCAATTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR TCA 90 bp | CCTGATTGGCTTAGGCATGCTCAGTGGGCGTTACACCAGTGTGACTaGCACAGGCACCTAGATGGCAGGGATGTGTGGTTAAGGAGAGCG | + |
Preference number: 1 (lower is better) Translates to: PDWLRHAQWALHQCD*HRHLDGRDVWLRRA Trigger: CGCTCTCCTTAACCACACATCCCTGCCATCTAGGTGCCTGTGTCAGTCACACTGGTGTAACGCCCACTGAGCATGCCTAAGCCAATCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR TCA 90 bp | CACAGAAGGCTGCAGAGCAGAGCAGAGGCTGTTGCTCACAAAGTCTaGTGGCCCTCCCCTCCACTTCTCAGAATTCTCCATGCAGGTTTG | + |
Preference number: 1 (lower is better) Translates to: HRRLQSRAEAVAHKV*WPSPPLLRILHAGL Trigger: CAAACCTGCATGGAGAATTCTGAGAAGTGGAGGGGAGGGCCATCAGACTTTGTGAGCAACAGCCTCTGCTCTGCTCTGCAGCCTTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR CCA 90 bp | CAGGGCTGTCTCTTCAAAACAATACTCTTAGATCTTGGGTTGTGGTaGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCAGCTGGGG | + |
Preference number: 1 (lower is better) Translates to: QGCLFKTILLDLGLW*NISAPSPRVREQLG Trigger: CCCCAGCTGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTATTGTTTTGAAGAGACAGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CCA 90 bp | CCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTCCCTaGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTG | + |
Preference number: 1 (lower is better) Translates to: PLPILWHWLNLSMCP*SWLGCFQWSSGAPL Trigger: CAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR TCA 90 bp | TATATACCTGTCAGTGGCAGTGGAAAGGCTGAGGTAGGAGGACCATaGGTTCGAGGCCAGCCTGGATTAAAGATCCCCAAACAGGCTCCC | + |
Preference number: 1 (lower is better) Translates to: YIPVSGSGKAEVGGP*VRGQPGLKIPKQAP Trigger: GGGAGCCTGTTTGGGGATCTTTAATCCAGGCTGGCCTCGAACTCATGGTCCTCCTACCTCAGCCTTTCCACTGCCACTGACAGGTATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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3UTR CCA 90 bp | GTGCAGGGCTGTCTCTTCAAAACAATACTCTTAGATCTTGGGTTGTaGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCAGCTG | + |
Preference number: 1 (lower is better) Translates to: VQGCLFKTILLDLGL*WNISAPSPRVREQL Trigger: CAGCTGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTATTGTTTTGAAGAGACAGCCCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CCA 90 bp | GGATGCGGTGCAGGGCTGTCTCTTCAAAACAATACTCTTAGATCTTaGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGA | + |
Preference number: 1 (lower is better) Translates to: GCGAGLSLQNNTLRS*VVVEHLSSIPEGQG Trigger: TCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTATTGTTTTGAAGAGACAGCCCTGCACCGCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CCA 90 bp | TTTATGGCATTGGTTGAACTTGTCCATGTGTCCCTGGAGCTGGCTTaGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCACT | + |
Preference number: 1 (lower is better) Translates to: FMALVELVHVSLELA*LLPVELRSPVVLGT Trigger: AGTGCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGTTCAACCAATGCCATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CCA 90 bp | ACCAGGGCCAGGTGTCTGGCAGTTTCAGGTCTTCATCTGTTCAGATaGACTGGAAAGCTAACCTCTCCTTGGCTCTGGGTAAAAGTCAGT | + |
Preference number: 1 (lower is better) Translates to: TRARCLAVSGLHLFR*TGKLTSPWLWVKVS Trigger: ACTGACTTTTACCCAGAGCCAAGGAGAGGTTAGCTTTCCAGTCCATCTGAACAGATGAAGACCTGAAACTGCCAGACACCTGGCCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR CCA 90 bp | ACGACACACGGCAAGTCATGGCTTGAGAATGTAGTAATGAGTCACTaGAACCCAGGACCGGACATCTCATTTCCTCCCCTTTCTCTGTCG | + |
Preference number: 1 (lower is better) Translates to: TTHGKSWLENVVMSH*NPGPDISFPPLSLS Trigger: CGACAGAGAAAGGGGAGGAAATGAGATGTCCGGTCCTGGGTTCCAGTGACTCATTACTACATTCTCAAGCCATGACTTGCCGTGTGTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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3UTR CCA 90 bp | CCATCACAGAACAGGCCTTTAATGACCCTCCCACTCCCAATTTTATaGCATTGGTTGAACTTGTCCATGTGTCCCTGGAGCTGGCTTGGT | + |
Preference number: 1 (lower is better) Translates to: PSQNRPLMTLPLPIL*HWLNLSMCPWSWLG Trigger: ACCAAGCCAGCTCCAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGCCTGTTCTGTGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CCA 90 bp | GAGAAAGCTGAATTTCAGAGAGACGACACGACACACGGCAAGTCATaGCTTGAGAATGTAGTAATGAGTCACTGGAACCCAGGACCGGAC | + |
Preference number: 1 (lower is better) Translates to: EKAEFQRDDTTHGKS*LENVVMSHWNPGPD Trigger: GTCCGGTCCTGGGTTCCAGTGACTCATTACTACATTCTCAAGCCATGACTTGCCGTGTGTCGTGTCGTCTCTCTGAAATTCAGCTTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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3UTR CCA 90 bp | ATGACGTCTTTAATAGTACAAAGCCACTGTGGAATCCAGGCATGGTaGTATATACCTGTCAGTGGCAGTGGAAAGGCTGAGGTAGGAGGA | + |
Preference number: 1 (lower is better) Translates to: MTSLIVQSHCGIQAW*YIPVSGSGKAEVGG Trigger: TCCTCCTACCTCAGCCTTTCCACTGCCACTGACAGGTATATACCACCATGCCTGGATTCCACAGTGGCTTTGTACTATTAAAGACGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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3UTR CCA 90 bp | TCCATGACGTCTTTAATAGTACAAAGCCACTGTGGAATCCAGGCATaGTGGTATATACCTGTCAGTGGCAGTGGAAAGGCTGAGGTAGGA | + |
Preference number: 1 (lower is better) Translates to: SMTSLIVQSHCGIQA*WYIPVSGSGKAEVG Trigger: TCCTACCTCAGCCTTTCCACTGCCACTGACAGGTATATACCACCATGCCTGGATTCCACAGTGGCTTTGTACTATTAAAGACGTCATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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3UTR CAA 90 bp | GGTGGACTCAGACTCGGAGGACTCAGAAGCCGGGCTCAGAGCGGCTaGCAGAACACAGAAGGCTGCAGAGCAGAGCAGAGGCTGTTGCTC | + |
Preference number: 2 (lower is better) Translates to: GGLRLGGLRSRAQSG*QNTEGCRAEQRLLL Trigger: GAGCAACAGCCTCTGCTCTGCTCTGCAGCCTTCTGTGTTCTGCAAGCCGCTCTGAGCCCGGCTTCTGAGTCCTCCGAGTCTGAGTCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR TCA 90 bp | AACAATGGCAGGGTCGGGGTGGGGCTAGAAGCGGAGCCTGGTGGACTCAGACTCGGTGTGTCCAGTCCTTaGCTGCATGGGTCTGAGGAC | + |
Preference number: 2 (lower is better) Translates to: NNGRVGVGLEAEPGGLRLGVSSP*LHGSED Trigger: GTCCTCAGACCCATGCAGTCAAGGACTGGACACACC...GAGTCTGAGTCCACCAGGCTCCGCTTCTAGCCCCACCCCGACCCTGCCATTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR TCA 90 bp | GTGAGCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGAAGGAGAGCGGCCAATaGGAGCCCAGTCCCAATCCC | + |
Preference number: 2 (lower is better) Translates to: VSRVGLVCCSWQEPLPPEKESGQ*EPSPNP Trigger: GGGATTGGGACTGGGCTCTCATTGGCCGCTCTCCTT...CTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR TCA 90 bp | GCCGGGCTCAGAGCGGCTTGCAGAACACAGAAGGCTGCAGAGCAGAGCAGAGGCAGTGCCCTTGACAGGTaGCCTCATGCAGTTATCCTG | + |
Preference number: 2 (lower is better) Translates to: AGLRAACRTQKAAEQSRGSALDR*PHAVIL Trigger: CAGGATAACTGCATGAGGTCACCTGTCAAGGGCACT...GCCTCTGCTCTGCTCTGCAGCCTTCTGTGTTCTGCAAGCCGCTCTGAGCCCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR GCA 90 bp | TTCAGCACCGGGGACACCTCGTCAGACAGAACCTTCCAGATGGTTCCTCAGGAGGCCAACAGGCCAGTCTaGGCCATCCCTGGCTTCCTG | + |
Preference number: 2 (lower is better) Translates to: FSTGDTSSDRTFQMVPQEANRPV*AIPGFL Trigger: CAGGAAGCCAGGGATGGCGCAGACTGGCCTGTTGGC...CTCCTGAGGAACCATCTGGAAGGTTCTGTCTGACGAGGTGTCCCCGGTGCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR CCA 90 bp | ACTTGTCCATGTGTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGGGGTCAGGGAGCAGCTaGGGCCAGGAACCCCTTCAT | + |
Preference number: 2 (lower is better) Translates to: TCPCVPGAGLVASSGAQEGSGSS*GQEPLH Trigger: ATGAAGGGGTTCCTGGCCCCAGCTGCTCCCTGACCC...CTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR TCA 90 bp | CTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCGGCGTTACACCAGTGTaGCTGACACAGGCACCTAGA | + |
Preference number: 2 (lower is better) Translates to: LELAWLLPVELRSPVVLGGVTPV*LTQAPR Trigger: TCTAGGTGCCTGTGTCAGTCACACTGGTGTAACGCC...GCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR TCA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTACCAGGAGAATTGCCTaGGGAACCTGGTGTGAGCAG | + |
Preference number: 2 (lower is better) Translates to: VPGAGLVASSGAQEPRCTTRRIA*GTWCEQ Trigger: CTGCTCACACCAGGTTCCTCAGGCAATTCTCCTGGT...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR GCA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGGTTGGGCTTGTTTaGTGCAGCTGGCAAGAGCCT | + |
Preference number: 2 (lower is better) Translates to: VPGAGLVASSGAQEPRCTRVGLV*CSWQEP Trigger: AGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCT...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR TCA 90 bp | AACAATGGCAGGGTCGGGGTGGGGCTAGAAGCGGAGCCTGGTGGACTCAGACTCGAGGTCACATTCTCTTaGGAGCAGGGCCATTCTGTT | + |
Preference number: 2 (lower is better) Translates to: NNGRVGVGLEAEPGGLRLEVTFS*EQGHSV Trigger: AACAGAATGGCCCTGCTCTCAAGAGAATGTGACCTC...GAGTCTGAGTCCACCAGGCTCCGCTTCTAGCCCCACCCCGACCCTGCCATTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR TCA 90 bp | AGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCAATGGGGGCTAGGAGGTaGGACAGGACCAGGAGAATT | + |
Preference number: 2 (lower is better) Translates to: RSWVVVEHLSSIPEGQGAMGARR*DRTRRI Trigger: AATTCTCCTGGTCCTGTCTCACCTCCTAGCCCCCAT...TGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR CCA 90 bp | GCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGCCTTGATGGCAGGGATGTGTaGTTAAGGAGAGCGGCCAAT | + |
Preference number: 2 (lower is better) Translates to: AGLGLFAAAGKSLFHLSLDGRDV*LRRAAN Trigger: ATTGGCCGCTCTCCTTAACCACACATCCCTGCCATC...AAGGCTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 90 bp | ATGGCATTGGTTGAACTTGTCCATGTGTCCCTGGAGCTGGCTTGGTaGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCACTCTG | + |
Preference number: 2 (lower is better) Translates to: MALVELVHVSLELAW*LPVELRSPVVLGTL Trigger: CAGAGTGCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGTTCAACCAATGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 90 bp | AGCGGCTTGCAGAACACAGAAGGCTGCAGAGCAGAGCAGAGGCTGTaGCTCACAAAGTCTGATGGCCCTCCCCTCCACTTCTCAGAATTC | + |
Preference number: 2 (lower is better) Translates to: SGLQNTEGCRAEQRL*LTKSDGPPLHFSEF Trigger: GAATTCTGAGAAGTGGAGGGGAGGGCCATCAGACTTTGTGAGCAACAGCCTCTGCTCTGCTCTGCAGCCTTCTGTGTTCTGCAAGCCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR TCA 90 bp | TGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCACTCTGGTAGCTTTACACCAGTGTGACTaGCACAGGCACCTAGATGGC | + |
Preference number: 2 (lower is better) Translates to: WLLPVELRSPVVLGTLVALHQCD*HRHLDG Trigger: GCCATCTAGGTGCCTGTGTCAGTCACACTGGTGTAA...AGCTACCAGAGTGCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR GCA 90 bp | GTGGACTCAGACTCGGAGGACTCAGAAGCCGGGCTCAGAGCGGCTTGCAGAACACAGTCAGCCTCTTGTTaGAATGTCAGAAGGTTGGAC | + |
Preference number: 2 (lower is better) Translates to: VDSDSEDSEAGLRAACRTQSASC*NVRRLD Trigger: GTCCAACCTTCTGACATTGCAACAAGAGGCTGACTG...TGTTCTGCAAGCCGCTCTGAGCCCGGCTTCTGAGTCCTCCGAGTCTGAGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR CCA 90 bp | GAGACAGGACCAGGAGAATTGCCTGAGGAACCTGGTGTGAGCAGGGTTGGGCTTGATGGCAGGGATGTGTaGTTAAGGAGAGCGGCCAAT | + |
Preference number: 2 (lower is better) Translates to: ETGPGELPEEPGVSRVGLDGRDV*LRRAAN Trigger: ATTGGCCGCTCTCCTTAACCACACATCCCTGCCATC...AAGCCCAACCCTGCTCACACCAGGTTCCTCAGGCAATTCTCCTGGTCCTGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR CCA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTCTTCCACCTGAGCCTTaGTTTCCCTTACATCCAACT | + |
Preference number: 2 (lower is better) Translates to: VPGAGLVASSGAQEPRCTLPPEP*FPLHPT Trigger: AGTTGGATGTAAGGGAAACCAAGGCTCAGGTGGAAG...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 90 bp | GCGGTGCAGGGCTGTCTCTTCAAAACAATACTCTTAGATCTTGGGTaGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCAG | + |
Preference number: 2 (lower is better) Translates to: AVQGCLFKTILLDLG*WWNISAPSPRVREQ Trigger: CTGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTATTGTTTTGAAGAGACAGCCCTGCACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 90 bp | ACTGGAAAGCTAACCTCTCCTTGGCTCTGGGTAAAAGTCAGTCTGTaGAGCCCAGCTCTGTGTCTTCAGCACCGGGGACACCTCGTCAGA | + |
Preference number: 2 (lower is better) Translates to: TGKLTSPWLWVKVSL*SPALCLQHRGHLVR Trigger: TCTGACGAGGTGTCCCCGGTGCTGAAGACACAGAGCTGGGCTCAACAGACTGACTTTTACCCAGAGCCAAGGAGAGGTTAGCTTTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR TCA 90 bp | ACTGTGGAATCCAGGCATGGTGGTATATACCTGTCAGTGGCAGTGGAAAGGCTGGTTCTGGTAGCCCTATaGACACCCAGGAGTTTTGCC | + |
Preference number: 2 (lower is better) Translates to: TVESRHGGIYLSVAVERLVLVAL*TPRSFA Trigger: GGCAAAACTCCTGGGTGTTCATAGGGCTACCAGAAC...CAGCCTTTCCACTGCCACTGACAGGTATATACCACCATGCCTGGATTCCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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3UTR-3UTR CCA 90 bp | TGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCACTCTGGTAGCTTTAGATCTTGGGTTGTaGTGGAACATCTCAGCTCCA | + |
Preference number: 2 (lower is better) Translates to: WLLPVELRSPVVLGTLVALDLGL*WNISAP Trigger: TGGAGCTGAGATGTTCCACCACAACCCAAGATCTAA...AGCTACCAGAGTGCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR CCA 90 bp | TCATGGCAGGTGAGCCTGGAGTTTATAGCTTGGTCCTTTTCTTGCCCTCTCTTGAGAGCACAGAAAGGCTaGCAAAGCTGCGCCTTGCCT | + |
Preference number: 2 (lower is better) Translates to: SWQVSLEFIAWSFSCPLLRAQKG*QSCALP Trigger: AGGCAAGGCGCAGCTTTGCCAGCCTTTCTGTGCTCT...CAAGAGAGGGCAAGAAAAGGACCAAGCTATAAACTCCAGGCTCACCTGCCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR GCA 90 bp | TCTGTGTTTGGATTTGCCTCCCCTGAGCATATCTACTTTGGAGTCTCACATGTGGGGCTCAGAGCGGCTTaGAGAACACAGAAGGCTGCA | + |
Preference number: 2 (lower is better) Translates to: SVFGFASPEHIYFGVSHVGLRAA*RTQKAA Trigger: TGCAGCCTTCTGTGTTCTGCAAGCCGCTCTGAGCCC...CACATGTGAGACTCCAAAGTAGATATGCTCAGGGGAGGCAAATCCAAACACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR GCA 90 bp | AAAGATCCCCAAACAGGCTCCCCACAAGCCCAGGTCTGTTCTGGTAGCCCTATGCTCTGTCGTCCTTTGTaGTCAGCAAACAAGAGACAA | + |
Preference number: 2 (lower is better) Translates to: KDPQTGSPQAQVCSGSPMLCRPL*SANKRQ Trigger: TTGTCTCTTGTTTGCTGAGCACAAAGGACGACAGAG...CATAGGGCTACCAGAACAGACCTGGGCTTGTGGGGAGCCTGTTTGGGGATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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3UTR-3UTR CCA 90 bp | GGGCCAGGTGTCTGGCAGTTTCAGGTCTTCATCTGTTCAGATGGACTGGAAAGCACCTCTCCTTGGCTCTaGGTAAAAGTCAGTCTGTTG | + |
Preference number: 2 (lower is better) Translates to: GPGVWQFQVFICSDGLESTSPWL*VKVSLL Trigger: CAACAGACTGACTTTTACCCAGAGCCAAGGAGAGGT...GCTTTCCAGTCCATCTGAACAGATGAAGACCTGAAACTGCCAGACACCTGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR TCA 90 bp | AGGCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCACCAGGAGAATTGCCTaGGGAACCTGGTGTGAGCAG | + |
Preference number: 2 (lower is better) Translates to: RPLMTLPLPILWHWLNLSTRRIA*GTWCEQ Trigger: CTGCTCACACCAGGTTCCTCAGGCAATTCTCCTGGT...GGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR GCA 90 bp | AGGCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCAGGGTTGGGCTTGTTTaGTGCAGCTGGCAAGAGCCT | + |
Preference number: 2 (lower is better) Translates to: RPLMTLPLPILWHWLNLSRVGLV*CSWQEP Trigger: AGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCT...GGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
3UTR-3UTR GCA 90 bp | CAGGCATGGTGGTATATACCTGTCAGTGGCAGTGGAAAGGCTGAGGTAGGAGGAGCCTTTGGAATTGCTTaGCCATGTGACCCTAACAAA | + |
Preference number: 2 (lower is better) Translates to: QAWWYIPVSGSGKAEVGGAFGIA*PCDPNK Trigger: TTTGTTAGGGTCACATGGGCAAGCAATTCCAAAGGC...TCCTCCTACCTCAGCCTTTCCACTGCCACTGACAGGTATATACCACCATGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
||
3UTR-3UTR CCA 90 bp | GACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTCCCTGGATCTTGGGTTGTGGTaGAACATCTCAGCTCCATCC | + |
Preference number: 2 (lower is better) Translates to: DPPTPNFMALVELVHVSLDLGLW*NISAPS Trigger: GGATGGAGCTGAGATGTTCCACCACAACCCAAGATC...CAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
3UTR-3UTR CCA 90 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATCTTGGTTGCTTCCAGTaGAGCTCAGGAGCCCCGTTG | + |
Preference number: 2 (lower is better) Translates to: AFNDPPTPNFMALVELVHLGCFQ*SSGAPL Trigger: CAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAG...ATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
3UTR-3UTR CCA 90 bp | GGTAGGAGGACCATGAGTTCGAGGCCAGCCTGGATTAAAGATCCCCAAACAGGCACACACGGCAAGTCATaGCTTGAGAATGTAGTAATG | + |
Preference number: 2 (lower is better) Translates to: GRRTMSSRPAWIKDPQTGTHGKS*LENVVM Trigger: CATTACTACATTCTCAAGCCATGACTTGCCGTGTGT...GCCTGTTTGGGGATCTTTAATCCAGGCTGGCCTCGAACTCATGGTCCTCCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
||
3UTR-3UTR TCA 90 bp | AGGCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCAGAGCCTCTTCCACCTaGGCCTTGGTTTCCCTTACA | + |
Preference number: 2 (lower is better) Translates to: RPLMTLPLPILWHWLNLSRASST*ALVSLT Trigger: TGTAAGGGAAACCAAGGCTCAGGTGGAAGAGGCTCT...GGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
3UTR-3UTR GCA 90 bp | TGCACAATTGTCATTGTGATAGATTTTAGGGCATTTTATAGCTACCTCCCTACCGGCAAAGCTGCGCCTTaGCTGTACCAGGGCCAGGTG | + |
Preference number: 2 (lower is better) Translates to: CTIVIVIDFRAFYSYLPTGKAAP*LYQGQV Trigger: CACCTGGCCCTGGTACAGGCAAGGCGCAGCTTTGCC...GGTAGGGAGGTAGCTATAAAATGCCCTAAAATCTATCACAATGACAATTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR-3UTR CCA 90 bp | TGTACCAGGGCCAGGTGTCTGGCAGTTTCAGGTCTTCATCTGTTCAGATGGACTAAGCTAACCTCTCCTTaGCTCTGGGTAAAAGTCAGT | + |
Preference number: 2 (lower is better) Translates to: CTRARCLAVSGLHLFRWTKLTSP*LWVKVS Trigger: ACTGACTTTTACCCAGAGCCAAGGAGAGGTTAGCTT...AGTCCATCTGAACAGATGAAGACCTGAAACTGCCAGACACCTGGCCCTGGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR-3UTR TCA 90 bp | TTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTGGCGTTACACCAGTGTaGCTGACACAGGCACCTAGA | + |
Preference number: 2 (lower is better) Translates to: LMTLPLPILWHWLNLSMCGVTPV*LTQAPR Trigger: TCTAGGTGCCTGTGTCAGTCACACTGGTGTAACGCC...ACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
3UTR-3UTR TCA 90 bp | TCATGGCAGGTGAGCCTGGAGTTTATAGCTTGGTCCTTTTCTTGCCCTCTCTTGTTCTCCATGCAGGTTTaGGTAGGTTTCAACACTCTG | + |
Preference number: 2 (lower is better) Translates to: SWQVSLEFIAWSFSCPLLFSMQV*VGFNTL Trigger: CAGAGTGTTGAAACCTACTCAAACCTGCATGGAGAA...CAAGAGAGGGCAAGAAAAGGACCAAGCTATAAACTCCAGGCTCACCTGCCATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR CAA 90 bp | CAGGTGAGCCTGGAGTTTATAGCTTGGTCCTTTTCTTGCCCTCTCTaGCTTTTTGGTGGAGATGTGGAAGATGTCCTAGTCACACATTCT | + |
Preference number: 2 (lower is better) Translates to: QVSLEFIAWSFSCPL*LFGGDVEDVLVTHS Trigger: AGAATGTGTGACTAGGACATCTTCCACATCTCCACCAAAAAGCAAGAGAGGGCAAGAAAAGGACCAAGCTATAAACTCCAGGCTCACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR TCA 90 bp | TTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTTTACACCAGTGTGACTaGCACAGGCACCTAGATGGC | + |
Preference number: 2 (lower is better) Translates to: LMTLPLPILWHWLNLSMCLHQCD*HRHLDG Trigger: GCCATCTAGGTGCCTGTGTCAGTCACACTGGTGTAA...ACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
3UTR-3UTR TCA 90 bp | TTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGCAGTCCTGGGGAAAGTaGGCTCTTCTCAGGAAAGAC | + |
Preference number: 2 (lower is better) Translates to: FNDPPTPNFMALVELVHVQSWGK*ALLRKD Trigger: GTCTTTCCTGAGAAGAGCTCACTTTCCCCAGGACTG...CACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR TCA 90 bp | TGCACAATTGTCATTGTGATAGATTTTAGGGCATTTTATAGCTACCTCCCTACCCATGGTCCTTCTGGGTaGACTTCGTCACAGTCAGCC | + |
Preference number: 2 (lower is better) Translates to: CTIVIVIDFRAFYSYLPTHGPSG*TSSQSA Trigger: GGCTGACTGTGACGAAGTTCACCCAGAAGGACCATG...GGTAGGGAGGTAGCTATAAAATGCCCTAAAATCTATCACAATGACAATTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR CCA 90 bp | CATAGCTGCACAATTGTCATTGTGATAGATTTTAGGGCATTTTATAGCTACCTCCCAGGGCCAGGTGTCTaGCAGTTTCAGGTCTTCATC | + |
Preference number: 2 (lower is better) Translates to: HSCTIVIVIDFRAFYSYLPGPGV*QFQVFI Trigger: GATGAAGACCTGAAACTGCCAGACACCTGGCCCTGG...GAGGTAGCTATAAAATGCCCTAAAATCTATCACAATGACAATTGTGCAGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR CCA 90 bp | TCATTTATCAAATGGGTTTCTCCTCCTCTTCCTCCTCCTCCTTTTGGTATAAAATCTGTTCAGATGGACTaGAAAGCTAACCTCTCCTTG | + |
Preference number: 2 (lower is better) Translates to: SFIKWVSPPLPPPPFGIKSVQMD*KANLSL Trigger: CAAGGAGAGGTTAGCTTTCCAGTCCATCTGAACAGA...TTTTATACCAAAAGGAGGAGGAGGAAGAGGAGGAGAAACCCATTTGATAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR GCA 72 bp | GACTCGGAGGACTCAGAAGCCGGGCTCAGAGCGGCTTaGAGAACACAGAAGGCTGCAGAGCAGAGCAGAGGC | + |
Preference number: 3 (lower is better) Translates to: DSEDSEAGLRAA*RTQKAAEQSRG Trigger: GCCTCTGCTCTGCTCTGCAGCCTTCTGTGTTCTGCAAGCCGCTCTGAGCCCGGCTTCTGAGTCCTCCGAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR CAA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTCAGGGTTGGGCTTGTTaGCTGCAGCTGGCAAGAGCC | + |
Preference number: 3 (lower is better) Translates to: VPGAGLVASSGAQEPRCTQGWAC*LQLARA Trigger: GGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTG...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR GCA 72 bp | GAGGAACCTGGTGTGAGCAGGGTTGGGCTTGTTTGCTaGAGCTGGCAAGAGCCTCTTCCACCTGAGCCTTGG | + |
Preference number: 3 (lower is better) Translates to: EEPGVSRVGLVC*SWQEPLPPEPW Trigger: CCAAGGCTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCACACCAGGTTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR GCA 72 bp | CCTGAGGAACCTGGTGTGAGCAGGGTTGGGCTTGTTTaGTGCAGCTGGCAAGAGCCTCTTCCACCTGAGCCT | + |
Preference number: 3 (lower is better) Translates to: PEEPGVSRVGLV*CSWQEPLPPEP Trigger: AGGCTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCACACCAGGTTCCTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CCA 72 bp | CCTGGTGTGAGCAGGGTTGGGCTTGTTTGCTGCAGCTaGCAAGAGCCTCTTCCACCTGAGCCTTGGTTTCCC | + |
Preference number: 3 (lower is better) Translates to: PGVSRVGLVCCS*QEPLPPEPWFP Trigger: GGGAAACCAAGGCTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCACACCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR CAA 90 bp | CCTGAGAGCACAGAAAGGCTGGCAAAGCTGCGCCTTGCCTGTACCAGGGCCAGGCAGCTCACTCCATGCTaGAGGTCACATTCTCTTGAG | + |
Preference number: 3 (lower is better) Translates to: PESTERLAKLRLACTRARQLTPC*RSHSLE Trigger: CTCAAGAGAATGTGACCTCAAGCATGGAGTGAGCTG...CCTGGCCCTGGTACAGGCAAGGCGCAGCTTTGCCAGCCTTTCTGTGCTCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR TCA 72 bp | CAGGCCAGTCTGCGCCATCCCTGGCTTCCTGTGTGGTaGCTTTCATCTCCAGCTCACTCCATGCTTGAGGTC | + |
Preference number: 3 (lower is better) Translates to: QASLRHPWLPVW*LSSPAHSMLEV Trigger: GACCTCAAGCATGGAGTGAGCTGGAGATGAAAGTCACCACACAGGAAGCCAGGGATGGCGCAGACTGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR CAA 90 bp | CCTGAGAGCACAGAAAGGCTGGCAAAGCTGCGCCTTGCCTGTACCAGGGCCAGGGTAAAAGTCAGTCTGTaGAGCCCAGCTCTGTGTCTT | + |
Preference number: 3 (lower is better) Translates to: PESTERLAKLRLACTRARVKVSL*SPALCL Trigger: AAGACACAGAGCTGGGCTCAACAGACTGACTTTTAC...CCTGGCCCTGGTACAGGCAAGGCGCAGCTTTGCCAGCCTTTCTGTGCTCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR TCA 72 bp | AGATGGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATaGGAGCCCAGTCCCAATCCCTCTAGCCTCCTCTCA | + |
Preference number: 3 (lower is better) Translates to: RWQGCVVKESGQ*EPSPNPSSLLS Trigger: TGAGAGGAGGCTAGAGGGATTGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCCATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR TCA 72 bp | AGACAGGACCAGGAGAATTGCCTGAGGAACCTGGTGTaGGCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAG | + |
Preference number: 3 (lower is better) Translates to: RQDQENCLRNLV*AGLGLFAAAGK Trigger: CTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCACACCAGGTTCCTCAGGCAATTCTCCTGGTCCTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR CAA 90 bp | ATACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCCAGGGTTGGGCTTGTTaGCTGCAGCTGGCAAGAGCC | + |
Preference number: 3 (lower is better) Translates to: ILLDLGLWWNISAPSPRVQGWAC*LQLARA Trigger: GGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTG...GACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR CAA 90 bp | GTGGACTCAGACTCGGAGGACTCAGAAGCCGGGCTCAGAGCGGCTTGCAGAACATTATCAAAGAAGTCATaGCCAACAGGCCAGTCTGCG | + |
Preference number: 3 (lower is better) Translates to: VDSDSEDSEAGLRAACRTLSKKS*PTGQSA Trigger: CGCAGACTGGCCTGTTGGCAATGACTTCTTTGATAA...TGTTCTGCAAGCCGCTCTGAGCCCGGCTTCTGAGTCCTCCGAGTCTGAGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR TCA 72 bp | TCAGTGCCCTTGACAGGTGACCTCATGCAGTTATCCTaGGAGCACAGAAAGGCTGGCAAAGCTGCGCCTTGC | + |
Preference number: 3 (lower is better) Translates to: SVPLTGDLMQLS*EHRKAGKAAPC Trigger: GCAAGGCGCAGCTTTGCCAGCCTTTCTGTGCTCTCAGGATAACTGCATGAGGTCACCTGTCAAGGGCACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR CCA 72 bp | TTGGTTGAACTTGTCCATGTGTCCCTGGAGCTGGCTTaGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTA | + |
Preference number: 3 (lower is better) Translates to: LVELVHVSLELA*LLPVELRSPVV Trigger: TACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGTTCAACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CCA 72 bp | CAAAGCTGCGCCTTGCCTGTACCAGGGCCAGGTGTCTaGCAGTTTCAGGTCTTCATCTGTTCAGATGGACTG | + |
Preference number: 3 (lower is better) Translates to: QSCALPVPGPGV*QFQVFICSDGL Trigger: CAGTCCATCTGAACAGATGAAGACCTGAAACTGCCAGACACCTGGCCCTGGTACAGGCAAGGCGCAGCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR TCA 72 bp | CTGCAGAGCAGAGCAGAGGCTGTTGCTCACAAAGTCTaGTGGCCCTCCCCTCCACTTCTCAGAATTCTCCAT | + |
Preference number: 3 (lower is better) Translates to: LQSRAEAVAHKV*WPSPPLLRILH Trigger: ATGGAGAATTCTGAGAAGTGGAGGGGAGGGCCATCAGACTTTGTGAGCAACAGCCTCTGCTCTGCTCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR TCA 72 bp | GCTCCCCACAAGCCCAGGTCTGTTCTGGTAGCCCTATaGACACCCAGGAGTTTTGCCTTTGGAATTGCTTGC | + |
Preference number: 3 (lower is better) Translates to: APHKPRSVLVAL*TPRSFAFGIAC Trigger: GCAAGCAATTCCAAAGGCAAAACTCCTGGGTGTTCATAGGGCTACCAGAACAGACCTGGGCTTGTGGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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3UTR-3UTR CAA 90 bp | GGTAGGAGGACCATGAGTTCGAGGCCAGCCTGGATTAAAGATCCCCAAACAGGCCCAGGAGTTTTGCCTTaGGAATTGCTTGCCCATGTG | + |
Preference number: 3 (lower is better) Translates to: GRRTMSSRPAWIKDPQTGPGVLP*ELLAHV Trigger: CACATGGGCAAGCAATTCCAAAGGCAAAACTCCTGG...GCCTGTTTGGGGATCTTTAATCCAGGCTGGCCTCGAACTCATGGTCCTCCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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3UTR TCA 72 bp | GTTGTACTAGGCACTCTGGTAGCTGAAGGCAAATTCTaGGGCAGGGATGCGGTGCAGGGCTGTCTCTTCAAA | + |
Preference number: 3 (lower is better) Translates to: VVLGTLVAEGKF*GRDAVQGCLFK Trigger: TTTGAAGAGACAGCCCTGCACCGCATCCCTGCCTCAGAATTTGCCTTCAGCTACCAGAGTGCCTAGTACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CCA 72 bp | TGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGCCTTaGTTTCCCTTACATCCAACTAAGAACTTGGTGCCT | + |
Preference number: 3 (lower is better) Translates to: CCSWQEPLPPEP*FPLHPTKNLVP Trigger: AGGCACCAAGTTCTTAGTTGGATGTAAGGGAAACCAAGGCTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR CAA 90 bp | AGGCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCCTGGAGCTGGCTTGGTaGCTTCCAGTGGAGCTCAGG | + |
Preference number: 3 (lower is better) Translates to: RPLMTLPLPILWHWLNLSLELAW*LPVELR Trigger: CCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAG...GGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR TCA 72 bp | TCAGAGAGACGACACGACACACGGCAAGTCATGGCTTaGGAATGTAGTAATGAGTCACTGGAACCCAGGACC | + |
Preference number: 3 (lower is better) Translates to: SERRHDTRQVMA*ECSNESLEPRT Trigger: GGTCCTGGGTTCCAGTGACTCATTACTACATTCTCAAGCCATGACTTGCCGTGTGTCGTGTCGTCTCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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3UTR GCA 72 bp | CCCATTATCAAAGAAGTCATTGCCAACAGGCCAGTCTaGGCCATCCCTGGCTTCCTGTGTGGTGACTTTCAT | + |
Preference number: 3 (lower is better) Translates to: PIIKEVIANRPV*AIPGFLCGDFH Trigger: ATGAAAGTCACCACACAGGAAGCCAGGGATGGCGCAGACTGGCCTGTTGGCAATGACTTCTTTGATAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR CAA 90 bp | TTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGCTGGAGCTGGCTTGGTaGCTTCCAGTGGAGCTCAGG | + |
Preference number: 3 (lower is better) Translates to: FNDPPTPNFMALVELVHVLELAW*LPVELR Trigger: CCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAG...CACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR-3UTR CAA 90 bp | GTGTTTGGATTTGCCTCCCCTGAGCATATCTACTTTGGAGTCTCACATGTGCTTCTTAGCTCAGTGCCCTaGACAGGTGACCTCATGCAG | + |
Preference number: 3 (lower is better) Translates to: VFGFASPEHIYFGVSHVLLSSVP*TGDLMQ Trigger: CTGCATGAGGTCACCTGTCAAGGGCACTGAGCTAAG...AAGCACATGTGAGACTCCAAAGTAGATATGCTCAGGGGAGGCAAATCCAAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR-3UTR CAA 90 bp | GTGTTTGGATTTGCCTCCCCTGAGCATATCTACTTTGGAGTCTCACATGTGCTTGCAGAGCAGAGGCTGTaGCTCACAAAGTCTGATGGC | + |
Preference number: 3 (lower is better) Translates to: VFGFASPEHIYFGVSHVLAEQRL*LTKSDG Trigger: GCCATCAGACTTTGTGAGCAACAGCCTCTGCTCTGC...AAGCACATGTGAGACTCCAAAGTAGATATGCTCAGGGGAGGCAAATCCAAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR TCA 72 bp | CCTTACATCCAACTAAGAACTTGGTGCCTCAGGCAATaGCTCTACCTGATTGGCTTAGGCATGCTCAGTGGG | + |
Preference number: 3 (lower is better) Translates to: PYIQLRTWCLRQ*LYLIGLGMLSG Trigger: CCCACTGAGCATGCCTAAGCCAATCAGGTAGAGTCATTGCCTGAGGCACCAAGTTCTTAGTTGGATGTAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
3UTR GCA 72 bp | TTCCTGTGTGGTGACTTTCATCTCCAGCTCACTCCATaGTTGAGGTCACATTCTCTTGAGAGCAGGGCCATT | + |
Preference number: 3 (lower is better) Translates to: FLCGDFHLQLTP*LRSHSLESRAI Trigger: AATGGCCCTGCTCTCAAGAGAATGTGACCTCAAGCATGGAGTGAGCTGGAGATGAAAGTCACCACACAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR CCA 72 bp | CTCTTCAAAACAATACTCTTAGATCTTGGGTTGTGGTaGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAG | + |
Preference number: 3 (lower is better) Translates to: LFKTILLDLGLW*NISAPSPRVRE Trigger: CTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTATTGTTTTGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
3UTR CCA 72 bp | TTCAGATGGACTGGAAAGCTAACCTCTCCTTGGCTCTaGGTAAAAGTCAGTCTGTTGAGCCCAGCTCTGTGT | + |
Preference number: 3 (lower is better) Translates to: FRWTGKLTSPWL*VKVSLLSPALC Trigger: ACACAGAGCTGGGCTCAACAGACTGACTTTTACCCAGAGCCAAGGAGAGGTTAGCTTTCCAGTCCATCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR CCA 72 bp | AGGTGTCTGGCAGTTTCAGGTCTTCATCTGTTCAGATaGACTGGAAAGCTAACCTCTCCTTGGCTCTGGGTA | + |
Preference number: 3 (lower is better) Translates to: RCLAVSGLHLFR*TGKLTSPWLWV Trigger: TACCCAGAGCCAAGGAGAGGTTAGCTTTCCAGTCCATCTGAACAGATGAAGACCTGAAACTGCCAGACACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR-3UTR CAA 90 bp | AGTACAAAGCCACTGTGGAATCCAGGCATGGTGGTATATACCTGTCAGTGGCAGGTTTTGCCTTTGGAATaGCTTGCCCATGTGACCCTA | + |
Preference number: 3 (lower is better) Translates to: STKPLWNPGMVVYTCQWQVLPLE*LAHVTL Trigger: TAGGGTCACATGGGCAAGCAATTCCAAAGGCAAAAC...CTGCCACTGACAGGTATATACCACCATGCCTGGATTCCACAGTGGCTTTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
||
3UTR CCA 72 bp | TGTCTCTTCAAAACAATACTCTTAGATCTTGGGTTGTaGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGG | + |
Preference number: 3 (lower is better) Translates to: CLFKTILLDLGL*WNISAPSPRVR Trigger: CCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTATTGTTTTGAAGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
3UTR CCA 72 bp | CCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTaGTTGAACTTGTCCATGTGTCCCTGGAGCTGGCTT | + |
Preference number: 3 (lower is better) Translates to: PLMTLPLPILWH*LNLSMCPWSWL Trigger: AAGCCAGCTCCAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
3UTR CCA 72 bp | AACAGGCCTTTAATGACCCTCCCACTCCCAATTTTATaGCATTGGTTGAACTTGTCCATGTGTCCCTGGAGC | + |
Preference number: 3 (lower is better) Translates to: NRPLMTLPLPIL*HWLNLSMCPWS Trigger: GCTCCAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGCCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
3UTR-3UTR CAA 90 bp | GAGAAAGCTGAATTTCAGAGAGACGACACGACACACGGCAAGTCATGGCTTGAGTTTCTCTGTCGTCCTTaGTGCTCAGCAAACAAGAGA | + |
Preference number: 3 (lower is better) Translates to: EKAEFQRDDTTHGKSWLEFLCRP*CSANKR Trigger: TCTCTTGTTTGCTGAGCACAAAGGACGACAGAGAAA...CTCAAGCCATGACTTGCCGTGTGTCGTGTCGTCTCTCTGAAATTCAGCTTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
||
3UTR-3UTR CAA 90 bp | TCCTTGACTCCCATGGCTTCATTTATCAAATGGGTTTCTCCTCCTCTTCCTCCTAAAGCTAACCTCTCCTaGGCTCTGGGTAAAAGTCAG | + |
Preference number: 3 (lower is better) Translates to: SLTPMASFIKWVSPPLPPKANLS*ALGKSQ Trigger: CTGACTTTTACCCAGAGCCAAGGAGAGGTTAGCTTT...AGGAGGAAGAGGAGGAGAAACCCATTTGATAAATGAAGCCATGGGAGTCAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR-3UTR CAA 90 bp | TCTGTGTTTGGATTTGCCTCCCCTGAGCATATCTACTTTGGAGTCTCACATGTGACAGTCAGCCTCTTGTaGCAATGTCAGAAGGTTGGA | + |
Preference number: 3 (lower is better) Translates to: SVFGFASPEHIYFGVSHVTVSLL*QCQKVG Trigger: TCCAACCTTCTGACATTGCAACAAGAGGCTGACTGT...CACATGTGAGACTCCAAAGTAGATATGCTCAGGGGAGGCAAATCCAAACACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR GCA 72 bp | AGTCAGCCTCTTGTTGCAATGTCAGAAGGTTGGACATaGCTGGTAGAAGAGTCACTCAATGTGCTTAGCTCA | + |
Preference number: 3 (lower is better) Translates to: SQPLVAMSEGWT*LVEESLNVLSS Trigger: TGAGCTAAGCACATTGAGTGACTCTTCTACCAGGCATGTCCAACCTTCTGACATTGCAACAAGAGGCTGACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR CCA 72 bp | TCTGGCAGTTTCAGGTCTTCATCTGTTCAGATGGACTaGAAAGCTAACCTCTCCTTGGCTCTGGGTAAAAGT | + |
Preference number: 3 (lower is better) Translates to: SGSFRSSSVQMD*KANLSLALGKS Trigger: ACTTTTACCCAGAGCCAAGGAGAGGTTAGCTTTCCAGTCCATCTGAACAGATGAAGACCTGAAACTGCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR CCA 72 bp | GAACACTTGGCCTCAAGACCTCCCCCAACCCAAAGCTaGCTAGTAATATCGCAATTCTCCTTTTGTGAAACA | + |
Preference number: 3 (lower is better) Translates to: EHLASRPPPTQS*LVISQFSFCET Trigger: TGTTTCACAAAAGGAGAATTGCGATATTACTAGCCAGCTTTGGGTTGGGGGAGGTCTTGAGGCCAAGTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR CCA 72 bp | GAATTTCAGAGAGACGACACGACACACGGCAAGTCATaGCTTGAGAATGTAGTAATGAGTCACTGGAACCCA | + |
Preference number: 3 (lower is better) Translates to: EFQRDDTTHGKS*LENVVMSHWNP Trigger: TGGGTTCCAGTGACTCATTACTACATTCTCAAGCCATGACTTGCCGTGTGTCGTGTCGTCTCTCTGAAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
||
3UTR CCA 72 bp | TTAATAGTACAAAGCCACTGTGGAATCCAGGCATGGTaGTATATACCTGTCAGTGGCAGTGGAAAGGCTGAG | + |
Preference number: 3 (lower is better) Translates to: LIVQSHCGIQAW*YIPVSGSGKAE Trigger: CTCAGCCTTTCCACTGCCACTGACAGGTATATACCACCATGCCTGGATTCCACAGTGGCTTTGTACTATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
||
3UTR CCA 72 bp | TTAGGTTCCTTGACTCCCATGGCTTCATTTATCAAATaGGTTTCTCCTCCTCTTCCTCCTCCTCCTTTTGGT | + |
Preference number: 3 (lower is better) Translates to: LGSLTPMASFIK*VSPPLPPPPFG Trigger: ACCAAAAGGAGGAGGAGGAAGAGGAGGAGAAACCCATTTGATAAATGAAGCCATGGGAGTCAAGGAACCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
3UTR CCA 72 bp | TCTTTAATAGTACAAAGCCACTGTGGAATCCAGGCATaGTGGTATATACCTGTCAGTGGCAGTGGAAAGGCT | + |
Preference number: 3 (lower is better) Translates to: SLIVQSHCGIQA*WYIPVSGSGKA Trigger: AGCCTTTCCACTGCCACTGACAGGTATATACCACCATGCCTGGATTCCACAGTGGCTTTGTACTATTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
||
3UTR CCA 72 bp | AAACTCCATGACGTCTTTAATAGTACAAAGCCACTGTaGAATCCAGGCATGGTGGTATATACCTGTCAGTGG | + |
Preference number: 3 (lower is better) Translates to: KLHDVFNSTKPL*NPGMVVYTCQW Trigger: CCACTGACAGGTATATACCACCATGCCTGGATTCCACAGTGGCTTTGTACTATTAAAGACGTCATGGAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
||
3UTR-3UTR CAA 90 bp | TCCTTGACTCCCATGGCTTCATTTATCAAATGGGTTTCTCCTCCTCTTCCTCCTAATGGAACAATGAACTaGTGTCCTATCATGCTTTTG | + |
Preference number: 3 (lower is better) Translates to: SLTPMASFIKWVSPPLPPNGTMN*CPIMLL Trigger: CAAAAGCATGATAGGACACAAGTTCATTGTTCCATT...AGGAGGAAGAGGAGGAGAAACCCATTTGATAAATGAAGCCATGGGAGTCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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3UTR TCA 72 bp | TTTTTCACTAAACATGTTTCCATCCCTGTGGTACCATaGGCCATTGCTTCATTTCTATTTATAGTTGAGAAA | + |
Preference number: 3 (lower is better) Translates to: FFTKHVSIPVVP*AIASFLFIVEK Trigger: TTTCTCAACTATAAATAGAAATGAAGCAATGGCTCATGGTACCACAGGGATGGAAACATGTTTAGTGAAAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR CCA 90 bp | GTGTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTAGCCTCGTCGGCCAGCTaGAAGCAGCGCCCGTCCACC | + |
Preference number: 4 (lower is better) Translates to: VSLELAWLLPVELRSPVVASSAS*KQRPST Trigger: GGTGGACGGGCGCTGCTTCCAGCTGGCCGACGAGGC...TACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | CCCGAGGGTCAGGGAGCAGCTGGGGCCAGGAACCCCTTCATTAGCCAGTCCTGGGCAGGATCTTCTCCATaGCAGCCACCTCAGGCACGC | + |
Preference number: 4 (lower is better) Translates to: PEGQGAAGARNPFISQSWAGSSP*QPPQAR Trigger: GCGTGCCTGAGGTGGCTGTCATGGAGAAGATCCTGC...CCAGGACTGGCTAATGAAGGGGTTCCTGGCCCCAGCTGCTCCCTGACCCTCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTGCCTCGTCGGCCAGCTaGAAGCAGCGCCCGTCCACC | + |
Preference number: 4 (lower is better) Translates to: GRDVWLRRAANESPVPIPASSAS*KQRPST Trigger: GGTGGACGGGCGCTGCTTCCAGCTGGCCGACGAGGC...AGGGATTGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | CTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCCCTCAGGCACGCTGGTaGTCACACCCAGGTCGGTGG | + |
Preference number: 4 (lower is better) Translates to: LELAWLLPVELRSPVVLGPQARW*SHPGRW Trigger: CCACCGACCTGGGTGTGACCACCAGCGTGCCTGAGG...GCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | AGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTCTAGCCTCCTCTCAGGAGATCGCTTCTCCAGGACACTaGTGCCCCGGCGTGGGATGC | + |
Preference number: 4 (lower is better) Translates to: RAANESPVPIPLASSQEIASPGH*CPGVGC Trigger: GCATCCCACGCCGGGGCATCAGTGTCCTGGAGAAGC...GATCTCCTGAGAGGAGGCTAGAGGGATTGGGACTGGGCTCTCATTGGCCGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056950.14 |
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CDS-3UTR TCA 90 bp | CCCCAAACAGGCTCCCCACAAGCCCAGGTCTGTTCTGGTAGCCCTATGAACACCGCTTCTCCAGGACACTaGTGCCCCGGCGTGGGATGC | + |
Preference number: 4 (lower is better) Translates to: PQTGSPQAQVCSGSPMNTASPGH*CPGVGC Trigger: GCATCCCACGCCGGGGCATCAGTGTCCTGGAGAAGC...GGTGTTCATAGGGCTACCAGAACAGACCTGGGCTTGTGGGGAGCCTGTTTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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CDS-3UTR CCA 90 bp | CCTGAGAGCACAGAAAGGCTGGCAAAGCTGCGCCTTGCCTGTACCAGGGCCAGGTTGGCAGCCTCTGCCTaGCCTAGACCTAGCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: PESTERLAKLRLACTRARLAASA*PRPSCS Trigger: GCTGCAGCTAGGTCTAGGCCAGGCAGAGGCTGCCAA...CCTGGCCCTGGTACAGGCAAGGCGCAGCTTTGCCAGCCTTTCTGTGCTCTCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR CCA 90 bp | GGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTCCACCTCAGGCACGCTaGTGGTCACACCCAGGTCGG | + |
Preference number: 4 (lower is better) Translates to: GRDVWLRRAANESPVPIPPPQAR*WSHPGR Trigger: CCGACCTGGGTGTGACCACCAGCGTGCCTGAGGTGG...AGGGATTGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | CTAGATGGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCACAGGGGCTGGGCTTCTaGGTGGCTCTGCAGAGCCTC | + |
Preference number: 4 (lower is better) Translates to: LDGRDVWLRRAANESPVPQGLGF*VALQSL Trigger: GAGGCTCTGCAGAGCCACTCAGAAGCCCAGCCCCTG...TGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCCATCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | ACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGCCGGAGGCTGGAGGATaGAGGGGTCCCAGGGGCTGG | + |
Preference number: 4 (lower is better) Translates to: TLRSWVVVEHLSSIPEGQPEAGG*RGPRGW Trigger: CCAGCCCCTGGGACCCCTGCATCCTCCAGCCTCCGG...CTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCAGCTGGGGCAGGAGGCACTGGTATaGTGTCAGCATGGCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: GLWWNISAPSPRVREQLGQEALV*CQHGWL Trigger: AAGCCAGCCATGCTGACAGCATACCAGTGCCTCCTG...CCCCAGCTGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTCTTGGAGGTGCTGCATaGCAGCTTGCCGGACAGGAC | + |
Preference number: 4 (lower is better) Translates to: VPGAGLVASSGAQEPRCTLGGAA*QLAGQD Trigger: GTCCTGTCCGGCAAGCTGGCATGCAGCACCTCCAAG...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTGCACTGTGCACACAGTaGCTGGGCTGCTGTGTCTGC | + |
Preference number: 4 (lower is better) Translates to: VPGAGLVASSGAQEPRCTALCTQ*LGCCVC Trigger: GCAGACACAGCAGCCCAGGCACTGTGTGCACAGTGC...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ACTTGTCCATGTGTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGAGGGGTCCCAGGGGCTaGGCTTCTGAGTGGCTCTGC | + |
Preference number: 4 (lower is better) Translates to: TCPCVPGAGLVASSGAQERGPRG*ASEWLC Trigger: GCAGAGCCACTCAGAAGCCCAGCCCCTGGGACCCCT...CTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | CTAGATGGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCAGCCCAGGCCTACAGCTaGGCGAGGGAGACTCTCGCA | + |
Preference number: 4 (lower is better) Translates to: LDGRDVWLRRAANESPVPAQAYS*ARETLA Trigger: TGCGAGAGTCTCCCTCGCCCAGCTGTAGGCCTGGGC...TGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCCATCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTCAGAAATGCGCCTCCTaGGAGGGGCTGCTGGAAGAG | + |
Preference number: 4 (lower is better) Translates to: VPGAGLVASSGAQEPRCTQKCAS*EGLLEE Trigger: CTCTTCCAGCAGCCCCTCCCAGGAGGCGCATTTCTG...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCAGCTGGGGCTTCTTCCTTGGGGGTaGTACTGGGGGTTGTTTGGC | + |
Preference number: 4 (lower is better) Translates to: GLWWNISAPSPRVREQLGLLPWG*YWGLFG Trigger: GCCAAACAACCCCCAGTACCACCCCCAAGGAAGAAG...CCCCAGCTGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | TGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCACTCTGGTAGCTCCACCTCAGGCACGCTaGTGGTCACACCCAGGTCGG | + |
Preference number: 4 (lower is better) Translates to: WLLPVELRSPVVLGTLVAPPQAR*WSHPGR Trigger: CCGACCTGGGTGTGACCACCAGCGTGCCTGAGGTGG...AGCTACCAGAGTGCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GTGTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTAGTTCCCAGCGATGGATaGAGTCCTGCACCTCCACGC | + |
Preference number: 4 (lower is better) Translates to: VSLELAWLLPVELRSPVVVPSDG*SPAPPR Trigger: GCGTGGAGGTGCAGGACTCCATCCATCGCTGGGAAC...TACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GTGTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTATGTGCACACAGTGCCTaGGCTGCTGTGTCTGCCCGT | + |
Preference number: 4 (lower is better) Translates to: VSLELAWLLPVELRSPVVCAHSA*AAVSAR Trigger: ACGGGCAGACACAGCAGCCCAGGCACTGTGTGCACA...TACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 72 bp | AGACTCGGAGGACTCAGAAGCCGGGCTCAGAGCGGCTaGCAGAACACAGAAGGCTGCAGAGCAGAGCAGAGG | + |
Preference number: 4 (lower is better) Translates to: RLGGLRSRAQSG*QNTEGCRAEQR Trigger: CCTCTGCTCTGCTCTGCAGCCTTCTGTGTTCTGCAAGCCGCTCTGAGCCCGGCTTCTGAGTCCTCCGAGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR TCA 90 bp | GTGTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTAGGGGCAGCCGTAGAGTaGAGGGCAGTAAGTCTCTAC | + |
Preference number: 4 (lower is better) Translates to: VSLELAWLLPVELRSPVVGAAVE*RAVSLY Trigger: GTAGAGACTTACTGCCCTTCACTCTACGGCTGCCCC...TACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | GTGAGCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGGGCTCTCCAAGGGACTaGGAAGGGTTGAGGCCAGCT | + |
Preference number: 4 (lower is better) Translates to: VSRVGLVCCSWQEPLPPEGSPRD*EGLRPA Trigger: AGCTGGCCTCAACCCTTCTCAGTCCCTTGGAGAGCC...CTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | GTGAGCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGCTTGAGCTGCTGCAGTaGGCCATCCCGGCTGTGGAT | + |
Preference number: 4 (lower is better) Translates to: VSRVGLVCCSWQEPLPPELELLQ*AIPAVD Trigger: ATCCACAGCCGGGATGGCTCACTGCAGCAGCTCAAG...CTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | GTGAGCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGGCAGGGCGGGGTCCATaGGCTCCATCATGTACTCCA | + |
Preference number: 4 (lower is better) Translates to: VSRVGLVCCSWQEPLPPEAGRGP*APSCTP Trigger: TGGAGTACATGATGGAGCTCATGGACCCCGCCCTGC...CTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GTGAGCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGCTTGGAGGTGCTGCATaGCAGCTTGCCGGACAGGAC | + |
Preference number: 4 (lower is better) Translates to: VSRVGLVCCSWQEPLPPELGGAA*QLAGQD Trigger: GTCCTGTCCGGCAAGCTGGCATGCAGCACCTCCAAG...CTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | CTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCTTCTCCTTGAGCTGCTaGAGTGAGCCATCCCGGCTG | + |
Preference number: 4 (lower is better) Translates to: LELAWLLPVELRSPVVLGFSLSC*SEPSRL Trigger: CAGCCGGGATGGCTCACTGCAGCAGCTCAAGGAGAA...GCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | AGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTCTAGCCTCCTCTCAGGAGATCGAACCCTCTCCTAACTaGAGGGCGGGGTCCATGAGC | + |
Preference number: 4 (lower is better) Translates to: RAANESPVPIPLASSQEIEPSPN*RAGSMS Trigger: GCTCATGGACCCCGCCCTGCAGTTAGGAGAGGGTTC...GATCTCCTGAGAGGAGGCTAGAGGGATTGGGACTGGGCTCTCATTGGCCGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGCCTTGCACTGTGCACACAGTaGCTGGGCTGCTGTGTCTGC | + |
Preference number: 4 (lower is better) Translates to: AGLGLFAAAGKSLFHLSLALCTQ*LGCCVC Trigger: GCAGACACAGCAGCCCAGGCACTGTGTGCACAGTGC...AAGGCTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGCCTTCTTCTCAGCGCACTGTaGACACAGTGCCTGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: AGLGLFAAAGKSLFHLSLLLSAL*TQCLGC Trigger: GCAGCCCAGGCACTGTGTGCACAGTGCGCTGAGAAG...AAGGCTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | AGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTCTAGCCTCCTCTCAGGAGATCCAGAAATGCGCCTCCTaGGAGGGGCTGCTGGAAGAG | + |
Preference number: 4 (lower is better) Translates to: RAANESPVPIPLASSQEIQKCAS*EGLLEE Trigger: CTCTTCCAGCAGCCCCTCCCAGGAGGCGCATTTCTG...GATCTCCTGAGAGGAGGCTAGAGGGATTGGGACTGGGCTCTCATTGGCCGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
CDS-3UTR CCA 90 bp | TGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCACTCTGGTAGCTCCTGGCTTTGCTCCGTaGTCCTTGGAGGCCTGTCCC | + |
Preference number: 4 (lower is better) Translates to: WLLPVELRSPVVLGTLVAPGFAP*SLEACP Trigger: GGGACAGGCCTCCAAGGACCACGGAGCAAAGCCAGG...AGCTACCAGAGTGCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ACTTGTCCATGTGTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCACCCAGGTCGGTGGTaGTGGTGGCCAGGACCACTA | + |
Preference number: 4 (lower is better) Translates to: TCPCVPGAGLVASSGAQEHPGRW*WWPGPL Trigger: TAGTGGTCCTGGCCACCACCACCACCGACCTGGGTG...CTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTTGTGCACACAGTGCCTaGGCTGCTGTGTCTGCCCGT | + |
Preference number: 4 (lower is better) Translates to: GRDVWLRRAANESPVPIPCAHSA*AAVSAR Trigger: ACGGGCAGACACAGCAGCCCAGGCACTGTGTGCACA...AGGGATTGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GAACCTGGTGTGAGCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTTCCTTGCCGCTGTCCTaGGGCCGGTACACGAAGTGG | + |
Preference number: 4 (lower is better) Translates to: EPGVSRVGLVCCSWQEPLSLPLS*GRYTKW Trigger: CCACTTCGTGTACCGGCCCCAGGACAGCGGCAAGGA...AAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCACACCAGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | AGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCATCCTTGCCGCTGTCCTaGGGCCGGTACACGAAGTGG | + |
Preference number: 4 (lower is better) Translates to: RSWVVVEHLSSIPEGQGASLPLS*GRYTKW Trigger: CCACTTCGTGTACCGGCCCCAGGACAGCGGCAAGGA...TGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | AGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCAGGCTCTCCAAGGGACTaGGAAGGGTTGAGGCCAGCT | + |
Preference number: 4 (lower is better) Translates to: RSWVVVEHLSSIPEGQGAGSPRD*EGLRPA Trigger: AGCTGGCCTCAACCCTTCTCAGTCCCTTGGAGAGCC...TGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | ACTTGTCCATGTGTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGGCAGGGCGGGGTCCATaGGCTCCATCATGTACTCCA | + |
Preference number: 4 (lower is better) Translates to: TCPCVPGAGLVASSGAQEAGRGP*APSCTP Trigger: TGGAGTACATGATGGAGCTCATGGACCCCGCCCTGC...CTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | TGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCACTCTGGTAGCTTGGCCTAGACCTAGCTaGAGCCACACAGGGCAGGTC | + |
Preference number: 4 (lower is better) Translates to: WLLPVELRSPVVLGTLVAWPRPS*SHTGQV Trigger: GACCTGCCCTGTGTGGCTGCAGCTAGGTCTAGGCCA...AGCTACCAGAGTGCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056950.14 |
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CDS-3UTR GCA 90 bp | CCCCAAACAGGCTCCCCACAAGCCCAGGTCTGTTCTGGTAGCCCTATGAACACCCCAGCCATCTCCTGCTaGAGGATCTTGGCAGCCTCT | + |
Preference number: 4 (lower is better) Translates to: PQTGSPQAQVCSGSPMNTPAISC*RILAAS Trigger: AGAGGCTGCCAAGATCCTGCAGCAGGAGATGGCTGG...GGTGTTCATAGGGCTACCAGAACAGACCTGGGCTTGTGGGGAGCCTGTTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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CDS-3UTR GCA 90 bp | GGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCAGCTGGGGACACACAGCACCAATTaGTTCAGGTTGTTGTCCCGG | + |
Preference number: 4 (lower is better) Translates to: GLWWNISAPSPRVREQLGTHSTN*FRLLSR Trigger: CCGGGACAACAACCTGAAGCAATTGGTGCTGTGTGT...CCCCAGCTGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTGGAGCTCTTGTCCTGTaGCAGCTCCACCACCTTCTT | + |
Preference number: 4 (lower is better) Translates to: VPGAGLVASSGAQEPRCTGALVL*QLHHLL Trigger: AAGAAGGTGGTGGAGCTGGCACAGGACAAGAGCTCC...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GAACCTGGTGTGAGCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTGAACCCTCTCCTAACTaGAGGGCGGGGTCCATGAGC | + |
Preference number: 4 (lower is better) Translates to: EPGVSRVGLVCCSWQEPLEPSPN*RAGSMS Trigger: GCTCATGGACCCCGCCCTGCAGTTAGGAGAGGGTTC...AAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCACACCAGGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | CTAGATGGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCATTGGCAGCCTCTGCCTaGCCTAGACCTAGCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: LDGRDVWLRRAANESPVPLAASA*PRPSCS Trigger: GCTGCAGCTAGGTCTAGGCCAGGCAGAGGCTGCCAA...TGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCCATCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056950.14 |
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CDS-3UTR CCA 90 bp | GAGACAGGACCAGGAGAATTGCCTGAGGAACCTGGTGTGAGCAGGGTTGGGCTTGGAGGGGGAGGGGCTTaGTGCAAGGGATTGGGAGTT | + |
Preference number: 4 (lower is better) Translates to: ETGPGELPEEPGVSRVGLGGGGA*CKGLGV Trigger: AACTCCCAATCCCTTGCACCAAGCCCCTCCCCCTCC...AAGCCCAACCCTGCTCACACCAGGTTCCTCAGGCAATTCTCCTGGTCCTGTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ACTTGTCCATGTGTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGTTGCTCCGTGGTCCTTaGAGGCCTGTCCCCAAGGCT | + |
Preference number: 4 (lower is better) Translates to: TCPCVPGAGLVASSGAQELLRGP*RPVPKA Trigger: AGCCTTGGGGACAGGCCTCCAAGGACCACGGAGCAA...CTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | CTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCCAGCATGGCTGGCTTTaGCCTCTGTGTCCTGGCTTT | + |
Preference number: 4 (lower is better) Translates to: LELAWLLPVELRSPVVLGQHGWL*PLCPGF Trigger: AAAGCCAGGACACAGAGGCCAAAGCCAGCCATGCTG...GCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GTGTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTATGCTGTCAGCATGGCTaGCTTTGGCCTCTGTGTCCT | + |
Preference number: 4 (lower is better) Translates to: VSLELAWLLPVELRSPVVCCQHG*LWPLCP Trigger: AGGACACAGAGGCCAAAGCCAGCCATGCTGACAGCA...TACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | CTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCCTTCCCAGGAGGCACTaGTATGCTGTCAGCATGGCT | + |
Preference number: 4 (lower is better) Translates to: LELAWLLPVELRSPVVLGLPRRH*YAVSMA Trigger: AGCCATGCTGACAGCATACCAGTGCCTCCTGGGAAG...GCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTCTTCCCAGGAGGCACTaGTATGCTGTCAGCATGGCT | + |
Preference number: 4 (lower is better) Translates to: VPGAGLVASSGAQEPRCTLPRRH*YAVSMA Trigger: AGCCATGCTGACAGCATACCAGTGCCTCCTGGGAAG...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGCCTCAGGCACGCTGGTaGTCACACCCAGGTCGGTGG | + |
Preference number: 4 (lower is better) Translates to: TLRSWVVVEHLSSIPEGQPQARW*SHPGRW Trigger: CCACCGACCTGGGTGTGACCACCAGCGTGCCTGAGG...CTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | ATACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCGCATGGGGTGCAAGGTaGGAGGTGGGCGTTAGGGGG | + |
Preference number: 4 (lower is better) Translates to: ILLDLGLWWNISAPSPRVAWGAR*EVGVRG Trigger: CCCCCTAACGCCCACCTCTCACCTTGCACCCCATGC...GACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTGGGAGGAAGGTTGAGTaGTGCTGTCCTAGAAATGCC | + |
Preference number: 4 (lower is better) Translates to: VPGAGLVASSGAQEPRCTGRKVE*CCPRNA Trigger: GGCATTTCTAGGACAGCATCACTCAACCTTCCTCCC...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | CCCGAGGGTCAGGGAGCAGCTGGGGCCAGGAACCCCTTCATTAGCCAGTCCTGGCTTGTCCAGGATCATTaGGGGTTTCTTCTTCACGTT | + |
Preference number: 4 (lower is better) Translates to: PEGQGAAGARNPFISQSWLVQDH*GFLLHV Trigger: AACGTGAAGAAGAAACCCTCAATGATCCTGGACAAG...CCAGGACTGGCTAATGAAGGGGTTCCTGGCCCCAGCTGCTCCCTGACCCTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | ATACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCGCCCGGTGCATGGGGTaGAAGGTGAGAGGTGGGCGT | + |
Preference number: 4 (lower is better) Translates to: ILLDLGLWWNISAPSPRVARCMG*KVRGGR Trigger: ACGCCCACCTCTCACCTTGCACCCCATGCACCGGGC...GACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTGGAGCTCTTGTCCTGTaGCAGCTCCACCACCTTCTT | + |
Preference number: 4 (lower is better) Translates to: GRDVWLRRAANESPVPIPGALVL*QLHHLL Trigger: AAGAAGGTGGTGGAGCTGGCACAGGACAAGAGCTCC...AGGGATTGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | AGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCATTCTCCTTGAGCTGCTaGAGTGAGCCATCCCGGCTG | + |
Preference number: 4 (lower is better) Translates to: RSWVVVEHLSSIPEGQGAFSLSC*SEPSRL Trigger: CAGCCGGGATGGCTCACTGCAGCAGCTCAAGGAGAA...TGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ATACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCGCCCAGGCCTACAGCTaGGCGAGGGAGACTCTCGCA | + |
Preference number: 4 (lower is better) Translates to: ILLDLGLWWNISAPSPRVAQAYS*ARETLA Trigger: TGCGAGAGTCTCCCTCGCCCAGCTGTAGGCCTGGGC...GACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | TGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCACTCTGGTAGCTGCAGCATCTCAGTGCTaGATGTCTGGCGGGCCATCA | + |
Preference number: 4 (lower is better) Translates to: WLLPVELRSPVVLGTLVAAASQC*MSGGPS Trigger: TGATGGCCCGCCAGACATCCAGCACTGAGATGCTGC...AGCTACCAGAGTGCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | AGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCAGCAGCATCTCAGTGCTaGATGTCTGGCGGGCCATCA | + |
Preference number: 4 (lower is better) Translates to: RSWVVVEHLSSIPEGQGAAASQC*MSGGPS Trigger: TGATGGCCCGCCAGACATCCAGCACTGAGATGCTGC...TGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | AGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTCTAGCCTCCTCTCAGGAGATCGGGCTCCGTAGGTGGTaGTCAGATAGTAGGAACCCT | + |
Preference number: 4 (lower is better) Translates to: RAANESPVPIPLASSQEIGLRRW*SDSRNP Trigger: AGGGTTCCTACTATCTGACCACCACCTACGGAGCCC...GATCTCCTGAGAGGAGGCTAGAGGGATTGGGACTGGGCTCTCATTGGCCGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | CCCGAGGGTCAGGGAGCAGCTGGGGCCAGGAACCCCTTCATTAGCCAGTCCTGGAGAACGCAATCAGTCTaGAGATGTCCTCAAACACAA | + |
Preference number: 4 (lower is better) Translates to: PEGQGAAGARNPFISQSWRTQSV*RCPQTQ Trigger: TTGTGTTTGAGGACATCTTCAGACTGATTGCGTTCT...CCAGGACTGGCTAATGAAGGGGTTCCTGGCCCCAGCTGCTCCCTGACCCTCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | GACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTCCCTGCAGGGGCTGGGCTTCTaGGTGGCTCTGCAGAGCCTC | + |
Preference number: 4 (lower is better) Translates to: DPPTPNFMALVELVHVSLQGLGF*VALQSL Trigger: GAGGCTCTGCAGAGCCACTCAGAAGCCCAGCCCCTG...CAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | ACTTGTCCATGTGTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCTAGCTGGTTCTCCTTaGGCTGCTGCAGTGAGCCAT | + |
Preference number: 4 (lower is better) Translates to: TCPCVPGAGLVASSGAQELAGSP*AAAVSH Trigger: ATGGCTCACTGCAGCAGCTCAAGGAGAACCAGCTAG...CTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | ACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGCAGGATCTTCTCCATaGCAGCCACCTCAGGCACGC | + |
Preference number: 4 (lower is better) Translates to: TLRSWVVVEHLSSIPEGQAGSSP*QPPQAR Trigger: GCGTGCCTGAGGTGGCTGTCATGGAGAAGATCCTGC...CTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | CTAGATGGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCAGGTAGGACACACAGATaGAGTCCTGCACAGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: LDGRDVWLRRAANESPVPGRTHR*SPAQRS Trigger: GCTCCTCTGTGCAGGACTTCATCTGTGTGTCCTACC...TGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCCATCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | AGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCAGGTAGGACACACAGATaGAGTCCTGCACAGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: RSWVVVEHLSSIPEGQGAGRTHR*SPAQRS Trigger: GCTCCTCTGTGCAGGACTTCATCTGTGTGTCCTACC...TGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | CCTCTTCCACCTGAGCCTTGGTTTCCCTTACATCCAACTAAGAACTTGGTGCCTGCCCGGTGCATGGGGTaGAAGGTGAGAGGTGGGCGT | + |
Preference number: 4 (lower is better) Translates to: PLPPEPWFPLHPTKNLVPARCMG*KVRGGR Trigger: ACGCCCACCTCTCACCTTGCACCCCATGCACCGGGC...AGGCACCAAGTTCTTAGTTGGATGTAAGGGAAACCAAGGCTCAGGTGGAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTCTGTTTCTCAGAGGATaGCTCCTGTATGGGGCTCTC | + |
Preference number: 4 (lower is better) Translates to: GRDVWLRRAANESPVPIPLFLRG*LLYGAL Trigger: GAGAGCCCCATACAGGAGGCATCCTCTGAGAAACAG...AGGGATTGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ACACTGATGACCTGTGGTGTTTCCATCACAGAACAGGCCTTTAATGACCCTCCCAGGGGTCCCAGGGGCTaGGCTTCTGAGTGGCTCTGC | + |
Preference number: 4 (lower is better) Translates to: TLMTCGVSITEQAFNDPPRGPRG*ASEWLC Trigger: GCAGAGCCACTCAGAAGCCCAGCCCCTGGGACCCCT...GGGAGGGTCATTAAAGGCCTGTTCTGTGATGGAAACACCACAGGTCATCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGACCCGCTTCTTCCTTaGGGGTGGTACTGGGGGTTG | + |
Preference number: 4 (lower is better) Translates to: TLRSWVVVEHLSSIPEGQDPLLP*GWYWGL Trigger: CAACCCCCAGTACCACCCCCAAGGAAGAAGCGGGTC...CTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GTGAGCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGTCTGAGAGTGAGGCCTaGGAACCCTTGAACTCTGGA | + |
Preference number: 4 (lower is better) Translates to: VSRVGLVCCSWQEPLPPESESEA*EPLNSG Trigger: TCCAGAGTTCAAGGGTTCCCAGGCCTCACTCTCAGA...CTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ACTTGTCCATGTGTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGGGGCTCCGTAGGTGGTaGTCAGATAGTAGGAACCCT | + |
Preference number: 4 (lower is better) Translates to: TCPCVPGAGLVASSGAQEGLRRW*SDSRNP Trigger: AGGGTTCCTACTATCTGACCACCACCTACGGAGCCC...CTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 72 bp | CAGAACACAGAAGGCTGCAGAGCAGAGCAGAGGCTGTaGCTCACAAAGTCTGATGGCCCTCCCCTCCACTTC | + |
Preference number: 4 (lower is better) Translates to: QNTEGCRAEQRL*LTKSDGPPLHF Trigger: GAAGTGGAGGGGAGGGCCATCAGACTTTGTGAGCAACAGCCTCTGCTCTGCTCTGCAGCCTTCTGTGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR TCA 90 bp | AACAATGGCAGGGTCGGGGTGGGGCTAGAAGCGGAGCCTGGTGGACTCAGACTCGCAGTAAGTCTCTACTaGCACAGTAGAACGCAATCA | + |
Preference number: 4 (lower is better) Translates to: NNGRVGVGLEAEPGGLRLAVSLY*HSRTQS Trigger: TGATTGCGTTCTACTGTGTCAGTAGAGACTTACTGC...GAGTCTGAGTCCACCAGGCTCCGCTTCTAGCCCCACCCCGACCCTGCCATTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR TCA 90 bp | ACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGGGCAGCCGTAGAGTaGAGGGCAGTAAGTCTCTAC | + |
Preference number: 4 (lower is better) Translates to: TLRSWVVVEHLSSIPEGQGAAVE*RAVSLY Trigger: GTAGAGACTTACTGCCCTTCACTCTACGGCTGCCCC...CTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | AGTGGGTCATGGCAGGTGAGCCTGGAGTTTATAGCTTGGTCCTTTTCTTGCCCTTGGCCTAGACCTAGCTaGAGCCACACAGGGCAGGTC | + |
Preference number: 4 (lower is better) Translates to: SGSWQVSLEFIAWSFSCPWPRPS*SHTGQV Trigger: GACCTGCCCTGTGTGGCTGCAGCTAGGTCTAGGCCA...AGGGCAAGAAAAGGACCAAGCTATAAACTCCAGGCTCACCTGCCATGACCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
||
CDS-3UTR GCA 90 bp | GTGGAATCCAGGCATGGTGGTATATACCTGTCAGTGGCAGTGGAAAGGCTGAGGATCCCAGCCATCTCCTaGTGCAGGATCTTGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: VESRHGGIYLSVAVERLRIPAIS*CRILAA Trigger: GGCTGCCAAGATCCTGCAGCAGGAGATGGCTGGGAT...CCTCAGCCTTTCCACTGCCACTGACAGGTATATACCACCATGCCTGGATTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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CDS-3UTR GCA 90 bp | ACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGCACCTCAGCTGAGCTaGCCTTCAGGGAAGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: TLRSWVVVEHLSSIPEGQAPQLS*PSGKGS Trigger: ACTTCCCTTCCCTGAAGGGCAGCTCAGCTGAGGTGC...CTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | TTAAAGATCCCCAAACAGGCTCCCCACAAGCCCAGGTCTGTTCTGGTAGCCCTAGCACCTCAGCTGAGCTaGCCTTCAGGGAAGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: LKIPKQAPHKPRSVLVALAPQLS*PSGKGS Trigger: ACTTCCCTTCCCTGAAGGGCAGCTCAGCTGAGGTGC...TAGGGCTACCAGAACAGACCTGGGCTTGTGGGGAGCCTGTTTGGGGATCTTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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CDS-3UTR GCA 90 bp | ATACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCGGGGGAGGGGCTTGGTaGAAGGGATTGGGAGTTGTC | + |
Preference number: 4 (lower is better) Translates to: ILLDLGLWWNISAPSPRVGGGAW*KGLGVV Trigger: GACAACTCCCAATCCCTTGCACCAAGCCCCTCCCCC...GACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | CTCTGGGTAAAAGTCAGTCTGTTGAGCCCAGCTCTGTGTCTTCAGCACCGGGGATCCTTTGCCAGCATCTaGAATAGGACCGGCAGGGTG | + |
Preference number: 4 (lower is better) Translates to: LWVKVSLLSPALCLQHRGSFASI*NRTGRV Trigger: CACCCTGCCGGTCCTATTCCAGATGCTGGCAAAGGA...TCCCCGGTGCTGAAGACACAGAGCTGGGCTCAACAGACTGACTTTTACCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR CCA 90 bp | GAACCTGGTGTGAGCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTGGCCCAGGTTGGAGATaGTCTCAAGTTCAAGGAAGC | + |
Preference number: 4 (lower is better) Translates to: EPGVSRVGLVCCSWQEPLGPGWR*SQVQGS Trigger: GCTTCCTTGAACTTGAGACCATCTCCAACCTGGGCC...AAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCACACCAGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGCCTTCTTGGTGCAAGGGATTaGGAGTTGTCCCAGGTTTCA | + |
Preference number: 4 (lower is better) Translates to: AGLGLFAAAGKSLFHLSLLGARD*ELSQVS Trigger: TGAAACCTGGGACAACTCCCAATCCCTTGCACCAAG...AAGGCTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ATACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCGGAGGGGGAGGGGCTTaGTGCAAGGGATTGGGAGTT | + |
Preference number: 4 (lower is better) Translates to: ILLDLGLWWNISAPSPRVGGGGA*CKGLGV Trigger: AACTCCCAATCCCTTGCACCAAGCCCCTCCCCCTCC...GACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ATACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCTTGCTCCGTGGTCCTTaGAGGCCTGTCCCCAAGGCT | + |
Preference number: 4 (lower is better) Translates to: ILLDLGLWWNISAPSPRVLLRGP*RPVPKA Trigger: AGCCTTGGGGACAGGCCTCCAAGGACCACGGAGCAA...GACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | CTAGATGGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCAGGAACCCTTGAACTCTaGAGAGCTTTGGGGACAGCT | + |
Preference number: 4 (lower is better) Translates to: LDGRDVWLRRAANESPVPGTLEL*RALGTA Trigger: AGCTGTCCCCAAAGCTCTCCAGAGTTCAAGGGTTCC...TGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCCATCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTCCCTGCACCCAGGTCGGTGGTaGTGGTGGCCAGGACCACTA | + |
Preference number: 4 (lower is better) Translates to: DPPTPNFMALVELVHVSLHPGRW*WWPGPL Trigger: TAGTGGTCCTGGCCACCACCACCACCGACCTGGGTG...CAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 72 bp | GTTGAACTTGTCCATGTGTCCCTGGAGCTGGCTTGGTaGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTA | + |
Preference number: 4 (lower is better) Translates to: VELVHVSLELAW*LPVELRSPVVL Trigger: TAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGTTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | TCCTTGACTCCCATGGCTTCATTTATCAAATGGGTTTCTCCTCCTCTTCCTCCTGCTTCTCCAGGACACTaGTGCCCCGGCGTGGGATGC | + |
Preference number: 4 (lower is better) Translates to: SLTPMASFIKWVSPPLPPASPGH*CPGVGC Trigger: GCATCCCACGCCGGGGCATCAGTGTCCTGGAGAAGC...AGGAGGAAGAGGAGGAGAAACCCATTTGATAAATGAAGCCATGGGAGTCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR TCA 90 bp | GAGACAGGACCAGGAGAATTGCCTGAGGAACCTGGTGTGAGCAGGGTTGGGCTTGTTCCACCAAGGCTTTaGGTTCAGTGCTCTGTAGCA | + |
Preference number: 4 (lower is better) Translates to: ETGPGELPEEPGVSRVGLVPPRL*VQCSVA Trigger: TGCTACAGAGCACTGAACTCAAAGCCTTGGTGGAAC...AAGCCCAACCCTGCTCACACCAGGTTCCTCAGGCAATTCTCCTGGTCCTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | AGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCAGTTCCACCAAGGCTTTaGGTTCAGTGCTCTGTAGCA | + |
Preference number: 4 (lower is better) Translates to: RSWVVVEHLSSIPEGQGAVPPRL*VQCSVA Trigger: TGCTACAGAGCACTGAACTCAAAGCCTTGGTGGAAC...TGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GGAACCCCTTCATTAGCCAGTCCTGGGGAAAGTGAGCTCTTCTCAGGAAAGACTATCCCAGCCATCTCCTaGTGCAGGATCTTGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: GTPSLASPGESELFSGKTIPAIS*CRILAA Trigger: GGCTGCCAAGATCCTGCAGCAGGAGATGGCTGGGAT...AGTCTTTCCTGAGAAGAGCTCACTTTCCCCAGGACTGGCTAATGAAGGGGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056950.14 |
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CDS-3UTR GCA 90 bp | AGTGGGTCATGGCAGGTGAGCCTGGAGTTTATAGCTTGGTCCTTTTCTTGCCCTATCCCAGCCATCTCCTaGTGCAGGATCTTGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: SGSWQVSLEFIAWSFSCPIPAIS*CRILAA Trigger: GGCTGCCAAGATCCTGCAGCAGGAGATGGCTGGGAT...AGGGCAAGAAAAGGACCAAGCTATAAACTCCAGGCTCACCTGCCATGACCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR GCA 90 bp | TTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGCCGGAGGCTGGAGGATaGAGGGGTCCCAGGGGCTGG | + |
Preference number: 4 (lower is better) Translates to: FNDPPTPNFMALVELVHVPEAGG*RGPRGW Trigger: CCAGCCCCTGGGACCCCTGCATCCTCCAGCCTCCGG...CACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | ACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGCTCCTCCTCTGCACTaGTGGTTGAGTAGGAGTCCT | + |
Preference number: 4 (lower is better) Translates to: TLRSWVVVEHLSSIPEGQAPPLH*WLSRSP Trigger: AGGACTCCTACTCAACCAGCAGTGCAGAGGAGGAGC...CTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GAGACAGGACCAGGAGAATTGCCTGAGGAACCTGGTGTGAGCAGGGTTGGGCTTATGGTACGGATCTCCTaGAGCATCTCAGTGCTGGAT | + |
Preference number: 4 (lower is better) Translates to: ETGPGELPEEPGVSRVGLMVRIS*SISVLD Trigger: ATCCAGCACTGAGATGCTGCAGGAGATCCGTACCAT...AAGCCCAACCCTGCTCACACCAGGTTCCTCAGGCAATTCTCCTGGTCCTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | ACACTGATGACCTGTGGTGTTTCCATCACAGAACAGGCCTTTAATGACCCTCCCCTTCTCAGCGCACTGTaGACACAGTGCCTGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: TLMTCGVSITEQAFNDPPLLSAL*TQCLGC Trigger: GCAGCCCAGGCACTGTGTGCACAGTGCGCTGAGAAG...GGGAGGGTCATTAAAGGCCTGTTCTGTGATGGAAACACCACAGGTCATCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GTGGAATCCAGGCATGGTGGTATATACCTGTCAGTGGCAGTGGAAAGGCTGAGGTCCTTTGCCAGCATCTaGAATAGGACCGGCAGGGTG | + |
Preference number: 4 (lower is better) Translates to: VESRHGGIYLSVAVERLRSFASI*NRTGRV Trigger: CACCCTGCCGGTCCTATTCCAGATGCTGGCAAAGGA...CCTCAGCCTTTCCACTGCCACTGACAGGTATATACCACCATGCCTGGATTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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CDS-3UTR CCA 90 bp | GAACCTGGTGTGAGCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCTTGGTGCAAGGGATTaGGAGTTGTCCCAGGTTTCA | + |
Preference number: 4 (lower is better) Translates to: EPGVSRVGLVCCSWQEPLLGARD*ELSQVS Trigger: TGAAACCTGGGACAACTCCCAATCCCTTGCACCAAG...AAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCACACCAGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | CTGAGGCAGGGATGCGGTGCAGGGCTGTCTCTTCAAAACAATACTCTTAGATCTCCTTGGGGGTGGTACTaGGGGTTGTTTGGCCTTCCC | + |
Preference number: 4 (lower is better) Translates to: LRQGCGAGLSLQNNTLRSPWGWY*GLFGLP Trigger: GGGAAGGCCAAACAACCCCCAGTACCACCCCCAAGG...AGATCTAAGAGTATTGTTTTGAAGAGACAGCCCTGCACCGCATCCCTGCCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGCTTCTTCCTTGGGGGTaGTACTGGGGGTTGTTTGGC | + |
Preference number: 4 (lower is better) Translates to: TLRSWVVVEHLSSIPEGQLLPWG*YWGLFG Trigger: GCCAAACAACCCCCAGTACCACCCCCAAGGAAGAAG...CTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ATACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCCTGGAGAGGAAGGCATaGAAGACGCTGGCGAAGCTG | + |
Preference number: 4 (lower is better) Translates to: ILLDLGLWWNISAPSPRVLERKA*KTLAKL Trigger: CAGCTTCGCCAGCGTCTTCCATGCCTTCCTCTCCAG...GACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GGAACCCCTTCATTAGCCAGTCCTGGGGAAAGTGAGCTCTTCTCAGGAAAGACTCTGGAGAGGAAGGCATaGAAGACGCTGGCGAAGCTG | + |
Preference number: 4 (lower is better) Translates to: GTPSLASPGESELFSGKTLERKA*KTLAKL Trigger: CAGCTTCGCCAGCGTCTTCCATGCCTTCCTCTCCAG...AGTCTTTCCTGAGAAGAGCTCACTTTCCCCAGGACTGGCTAATGAAGGGGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GGAACCCCTTCATTAGCCAGTCCTGGGGAAAGTGAGCTCTTCTCAGGAAAGACTTCAGTGCTGGATGTCTaGCGGGCCATCATCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: GTPSLASPGESELFSGKTSVLDV*RAIISR Trigger: CCTGGAGATGATGGCCCGCCAGACATCCAGCACTGA...AGTCTTTCCTGAGAAGAGCTCACTTTCCCCAGGACTGGCTAATGAAGGGGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GGAACCCCTTCATTAGCCAGTCCTGGGGAAAGTGAGCTCTTCTCAGGAAAGACTGCCAGGACCACTAGCTaGTTCTCCTTGAGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: GTPSLASPGESELFSGKTARTTS*FSLSCC Trigger: GCAGCAGCTCAAGGAGAACCAGCTAGTGGTCCTGGC...AGTCTTTCCTGAGAAGAGCTCACTTTCCCCAGGACTGGCTAATGAAGGGGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGTCTTCAGCAAGATaGAGATTTTCTTCCCTGGTG | + |
Preference number: 4 (lower is better) Translates to: VPGAGLVASSGAQEPRCTRSSAR*RFSSLV Trigger: CACCAGGGAAGAAAATCTCCATCTTGCTGAAGACCT...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ACACTGATGACCTGTGGTGTTTCCATCACAGAACAGGCCTTTAATGACCCTCCCGTTCCCAGCGATGGATaGAGTCCTGCACCTCCACGC | + |
Preference number: 4 (lower is better) Translates to: TLMTCGVSITEQAFNDPPVPSDG*SPAPPR Trigger: GCGTGGAGGTGCAGGACTCCATCCATCGCTGGGAAC...GGGAGGGTCATTAAAGGCCTGTTCTGTGATGGAAACACCACAGGTCATCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | AGGCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCCTCCAGCACCTCAGCTaGGCTGCCCTTCAGGGAAGG | + |
Preference number: 4 (lower is better) Translates to: RPLMTLPLPILWHWLNLSLQHLS*AALQGR Trigger: CCTTCCCTGAAGGGCAGCTCAGCTGAGGTGCTGGAG...GGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | TCTGTGTTTGGATTTGCCTCCCCTGAGCATATCTACTTTGGAGTCTCACATGTGCTCCAGCACCTCAGCTaGGCTGCCCTTCAGGGAAGG | + |
Preference number: 4 (lower is better) Translates to: SVFGFASPEHIYFGVSHVLQHLS*AALQGR Trigger: CCTTCCCTGAAGGGCAGCTCAGCTGAGGTGCTGGAG...CACATGTGAGACTCCAAAGTAGATATGCTCAGGGGAGGCAAATCCAAACACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR TCA 90 bp | GGGCTCAGAGCGGCTTGCAGAACACAGAAGGCTGCAGAGCAGAGCAGAGGCTGTAGAACGCAATCAGTCTaGAGATGTCCTCAAACACAA | + |
Preference number: 4 (lower is better) Translates to: GLRAACRTQKAAEQSRGCRTQSV*RCPQTQ Trigger: TTGTGTTTGAGGACATCTTCAGACTGATTGCGTTCT...ACAGCCTCTGCTCTGCTCTGCAGCCTTCTGTGTTCTGCAAGCCGCTCTGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR TCA 90 bp | GCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGCCTTGCAGTAAGTCTCTACTaGCACAGTAGAACGCAATCA | + |
Preference number: 4 (lower is better) Translates to: AGLGLFAAAGKSLFHLSLAVSLY*HSRTQS Trigger: TGATTGCGTTCTACTGTGTCAGTAGAGACTTACTGC...AAGGCTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGCATGGGGTGCAAGGTaGGAGGTGGGCGTTAGGGGG | + |
Preference number: 4 (lower is better) Translates to: AFNDPPTPNFMALVELVHAWGAR*EVGVRG Trigger: CCCCCTAACGCCCACCTCTCACCTTGCACCCCATGC...ATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | ACTAAGAACTTGGTGCCTCAGGCAATGACTCTACCTGATTGGCTTAGGCATGCTCTTGAGCTGCTGCAGTaGGCCATCCCGGCTGTGGAT | + |
Preference number: 4 (lower is better) Translates to: TKNLVPQAMTLPDWLRHALELLQ*AIPAVD Trigger: ATCCACAGCCGGGATGGCTCACTGCAGCAGCTCAAG...AGCATGCCTAAGCCAATCAGGTAGAGTCATTGCCTGAGGCACCAAGTTCTTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | TGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCACTCTGGTAGCTGATTTTCTTCCCTGGTaGGTAGGCTTTGTGCATGCT | + |
Preference number: 4 (lower is better) Translates to: WLLPVELRSPVVLGTLVADFLPW*VGFVHA Trigger: AGCATGCACAAAGCCTACTCACCAGGGAAGAAAATC...AGCTACCAGAGTGCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | ACACTGATGACCTGTGGTGTTTCCATCACAGAACAGGCCTTTAATGACCCTCCCCCAGCCATCTCCTGCTaGAGGATCTTGGCAGCCTCT | + |
Preference number: 4 (lower is better) Translates to: TLMTCGVSITEQAFNDPPPAISC*RILAAS Trigger: AGAGGCTGCCAAGATCCTGCAGCAGGAGATGGCTGG...GGGAGGGTCATTAAAGGCCTGTTCTGTGATGGAAACACCACAGGTCATCAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056950.14 |
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CDS-3UTR GCA 90 bp | CTGAGGCAGGGATGCGGTGCAGGGCTGTCTCTTCAAAACAATACTCTTAGATCTGCACCTCAGCTGAGCTaGCCTTCAGGGAAGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: LRQGCGAGLSLQNNTLRSAPQLS*PSGKGS Trigger: ACTTCCCTTCCCTGAAGGGCAGCTCAGCTGAGGTGC...AGATCTAAGAGTATTGTTTTGAAGAGACAGCCCTGCACCGCATCCCTGCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTTTCACAGGAACAATTTaGGTAATGGGTTGTAGGCCG | + |
Preference number: 4 (lower is better) Translates to: GRDVWLRRAANESPVPIPFTGTI*VMGCRP Trigger: CGGCCTACAACCCATTACGCAAATTGTTCCTGTGAA...AGGGATTGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | AGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTCTAGCCTCCTCTCAGGAGATCTTCACAGGAACAATTTaGGTAATGGGTTGTAGGCCG | + |
Preference number: 4 (lower is better) Translates to: RAANESPVPIPLASSQEIFTGTI*VMGCRP Trigger: CGGCCTACAACCCATTACGCAAATTGTTCCTGTGAA...GATCTCCTGAGAGGAGGCTAGAGGGATTGGGACTGGGCTCTCATTGGCCGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | ACACTGATGACCTGTGGTGTTTCCATCACAGAACAGGCCTTTAATGACCCTCCCAGTTCCTCCTCCGAGTaGAGGGTGGGTTCCACCAAG | + |
Preference number: 4 (lower is better) Translates to: TLMTCGVSITEQAFNDPPSSSSE*RVGSTK Trigger: CTTGGTGGAACCCACCCTGCACTCGGAGGAGGAACT...GGGAGGGTCATTAAAGGCCTGTTCTGTGATGGAAACACCACAGGTCATCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | CCTCTTCCACCTGAGCCTTGGTTTCCCTTACATCCAACTAAGAACTTGGTGCCTAGTTCCTCCTCCGAGTaGAGGGTGGGTTCCACCAAG | + |
Preference number: 4 (lower is better) Translates to: PLPPEPWFPLHPTKNLVPSSSSE*RVGSTK Trigger: CTTGGTGGAACCCACCCTGCACTCGGAGGAGGAACT...AGGCACCAAGTTCTTAGTTGGATGTAAGGGAAACCAAGGCTCAGGTGGAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
CDS-3UTR GCA 90 bp | GACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTCCCTGCGATGGATGGAGTCCTaGACCTCCACGCTCAGCTGT | + |
Preference number: 4 (lower is better) Translates to: DPPTPNFMALVELVHVSLRWMES*TSTLSC Trigger: ACAGCTGAGCGTGGAGGTGCAGGACTCCATCCATCG...CAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | AGGCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCCCTGGCTTTGCTCCGTaGTCCTTGGAGGCCTGTCCC | + |
Preference number: 4 (lower is better) Translates to: RPLMTLPLPILWHWLNLSPGFAP*SLEACP Trigger: GGGACAGGCCTCCAAGGACCACGGAGCAAAGCCAGG...GGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GGAACCCCTTCATTAGCCAGTCCTGGGGAAAGTGAGCTCTTCTCAGGAAAGACTGGTATGCTGTCAGCATaGCTGGCTTTGGCCTCTGTG | + |
Preference number: 4 (lower is better) Translates to: GTPSLASPGESELFSGKTGMLSA*LALASV Trigger: CACAGAGGCCAAAGCCAGCCATGCTGACAGCATACC...AGTCTTTCCTGAGAAGAGCTCACTTTCCCCAGGACTGGCTAATGAAGGGGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | CTGAGGCAGGGATGCGGTGCAGGGCTGTCTCTTCAAAACAATACTCTTAGATCTGCCAGGACCACTAGCTaGTTCTCCTTGAGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: LRQGCGAGLSLQNNTLRSARTTS*FSLSCC Trigger: GCAGCAGCTCAAGGAGAACCAGCTAGTGGTCCTGGC...AGATCTAAGAGTATTGTTTTGAAGAGACAGCCCTGCACCGCATCCCTGCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | CCTCTTCCACCTGAGCCTTGGTTTCCCTTACATCCAACTAAGAACTTGGTGCCTGTGGTCCCTGTCTGTTaGAGTCCCCACATTCTGGCT | + |
Preference number: 4 (lower is better) Translates to: PLPPEPWFPLHPTKNLVPVVPVC*SPHILA Trigger: AGCCAGAATGTGGGGACTTCAACAGACAGGGACCAC...AGGCACCAAGTTCTTAGTTGGATGTAAGGGAAACCAAGGCTCAGGTGGAAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | CCACAAGCCCAGGTCTGTTCTGGTAGCCCTATGAACACCCAGGAGTTTTGCCTTACAGACCAAGCCTCGTaGCGTCTTTCTCCTCATCTT | + |
Preference number: 4 (lower is better) Translates to: PQAQVCSGSPMNTQEFCLTDQAS*RLSPHL Trigger: AAGATGAGGAGAAAGACGGCACGAGGCTTGGTCTGT...AAGGCAAAACTCCTGGGTGTTCATAGGGCTACCAGAACAGACCTGGGCTTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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CDS-3UTR GCA 90 bp | ACTAAGAACTTGGTGCCTCAGGCAATGACTCTACCTGATTGGCTTAGGCATGCTTCTGTGTCCTGGCTTTaGTCCGTGGTCCTTGGAGGC | + |
Preference number: 4 (lower is better) Translates to: TKNLVPQAMTLPDWLRHASVSWL*SVVLGG Trigger: GCCTCCAAGGACCACGGAGCAAAGCCAGGACACAGA...AGCATGCCTAAGCCAATCAGGTAGAGTCATTGCCTGAGGCACCAAGTTCTTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | ACACTGATGACCTGTGGTGTTTCCATCACAGAACAGGCCTTTAATGACCCTCCCCAGGAGGCACTGGTATaGTGTCAGCATGGCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: TLMTCGVSITEQAFNDPPQEALV*CQHGWL Trigger: AAGCCAGCCATGCTGACAGCATACCAGTGCCTCCTG...GGGAGGGTCATTAAAGGCCTGTTCTGTGATGGAAACACCACAGGTCATCAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | CTGAGGCAGGGATGCGGTGCAGGGCTGTCTCTTCAAAACAATACTCTTAGATCTGCTCCTCCTCTGCACTaGTGGTTGAGTAGGAGTCCT | + |
Preference number: 4 (lower is better) Translates to: LRQGCGAGLSLQNNTLRSAPPLH*WLSRSP Trigger: AGGACTCCTACTCAACCAGCAGTGCAGAGGAGGAGC...AGATCTAAGAGTATTGTTTTGAAGAGACAGCCCTGCACCGCATCCCTGCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
CDS-3UTR GCA 90 bp | CTGAGGCAGGGATGCGGTGCAGGGCTGTCTCTTCAAAACAATACTCTTAGATCTAGTCCTGCACCAGGCTaGCGAAGTAGGAGCTCTTGT | + |
Preference number: 4 (lower is better) Translates to: LRQGCGAGLSLQNNTLRSSPAPG*RSRSSC Trigger: ACAAGAGCTCCTACTTCGGCAGCCTGGTGCAGGACT...AGATCTAAGAGTATTGTTTTGAAGAGACAGCCCTGCACCGCATCCCTGCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | ACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGATGGTACGGATCTCCTaGAGCATCTCAGTGCTGGAT | + |
Preference number: 4 (lower is better) Translates to: TLRSWVVVEHLSSIPEGQMVRIS*SISVLD Trigger: ATCCAGCACTGAGATGCTGCAGGAGATCCGTACCAT...CTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | ACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGAGTAGGCTTTGTGCATaGTGGTCAGCTTCTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: TLRSWVVVEHLSSIPEGQSRLCA*WSASAG Trigger: TCCTGCAGAAGCTGACCAGCATGCACAAAGCCTACT...CTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | ACTAAGAACTTGGTGCCTCAGGCAATGACTCTACCTGATTGGCTTAGGCATGCTCGATGGATGGAGTCCTaGACCTCCACGCTCAGCTGT | + |
Preference number: 4 (lower is better) Translates to: TKNLVPQAMTLPDWLRHARWMES*TSTLSC Trigger: ACAGCTGAGCGTGGAGGTGCAGGACTCCATCCATCG...AGCATGCCTAAGCCAATCAGGTAGAGTCATTGCCTGAGGCACCAAGTTCTTAGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | CTGAGGCAGGGATGCGGTGCAGGGCTGTCTCTTCAAAACAATACTCTTAGATCTTCCTTTGCCAGCATCTaGAATAGGACCGGCAGGGTG | + |
Preference number: 4 (lower is better) Translates to: LRQGCGAGLSLQNNTLRSSFASI*NRTGRV Trigger: CACCCTGCCGGTCCTATTCCAGATGCTGGCAAAGGA...AGATCTAAGAGTATTGTTTTGAAGAGACAGCCCTGCACCGCATCCCTGCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056950.14 |
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CDS-3UTR CCA 90 bp | AGTGGGTCATGGCAGGTGAGCCTGGAGTTTATAGCTTGGTCCTTTTCTTGCCCTGGCCCAGGTTGGAGATaGTCTCAAGTTCAAGGAAGC | + |
Preference number: 4 (lower is better) Translates to: SGSWQVSLEFIAWSFSCPGPGWR*SQVQGS Trigger: GCTTCCTTGAACTTGAGACCATCTCCAACCTGGGCC...AGGGCAAGAAAAGGACCAAGCTATAAACTCCAGGCTCACCTGCCATGACCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR CCA 90 bp | CCTCTTCCACCTGAGCCTTGGTTTCCCTTACATCCAACTAAGAACTTGGTGCCTCAGCATGGCTGGCTTTaGCCTCTGTGTCCTGGCTTT | + |
Preference number: 4 (lower is better) Translates to: PLPPEPWFPLHPTKNLVPQHGWL*PLCPGF Trigger: AAAGCCAGGACACAGAGGCCAAAGCCAGCCATGCTG...AGGCACCAAGTTCTTAGTTGGATGTAAGGGAAACCAAGGCTCAGGTGGAAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | CCTCTTCCACCTGAGCCTTGGTTTCCCTTACATCCAACTAAGAACTTGGTGCCTTGCTGTCAGCATGGCTaGCTTTGGCCTCTGTGTCCT | + |
Preference number: 4 (lower is better) Translates to: PLPPEPWFPLHPTKNLVPCCQHG*LWPLCP Trigger: AGGACACAGAGGCCAAAGCCAGCCATGCTGACAGCA...AGGCACCAAGTTCTTAGTTGGATGTAAGGGAAACCAAGGCTCAGGTGGAAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GGAACCCCTTCATTAGCCAGTCCTGGGGAAAGTGAGCTCTTCTCAGGAAAGACTTCTGAGAGTGAGGCCTaGGAACCCTTGAACTCTGGA | + |
Preference number: 4 (lower is better) Translates to: GTPSLASPGESELFSGKTSESEA*EPLNSG Trigger: TCCAGAGTTCAAGGGTTCCCAGGCCTCACTCTCAGA...AGTCTTTCCTGAGAAGAGCTCACTTTCCCCAGGACTGGCTAATGAAGGGGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | CTCTGGGTAAAAGTCAGTCTGTTGAGCCCAGCTCTGTGTCTTCAGCACCGGGGACTCAAACACAAGAACTaGGCCTTCCAGGTACAGTAT | + |
Preference number: 4 (lower is better) Translates to: LWVKVSLLSPALCLQHRGLKHKN*AFQVQY Trigger: ATACTGTACCTGGAAGGCTCAGTTCTTGTGTTTGAG...TCCCCGGTGCTGAAGACACAGAGCTGGGCTCAACAGACTGACTTTTACCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR TCA 90 bp | CCTCTTCCACCTGAGCCTTGGTTTCCCTTACATCCAACTAAGAACTTGGTGCCTGGGAGGAAGGTTGAGTaGTGCTGTCCTAGAAATGCC | + |
Preference number: 4 (lower is better) Translates to: PLPPEPWFPLHPTKNLVPGRKVE*CCPRNA Trigger: GGCATTTCTAGGACAGCATCACTCAACCTTCCTCCC...AGGCACCAAGTTCTTAGTTGGATGTAAGGGAAACCAAGGCTCAGGTGGAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | ATACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCCCATGGAGTCATAGATaGGCTTGCAGGTCTTCAGCA | + |
Preference number: 4 (lower is better) Translates to: ILLDLGLWWNISAPSPRVPWSHR*ACRSSA Trigger: TGCTGAAGACCTGCAAGCTCATCTATGACTCCATGG...GACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GGAACCCCTTCATTAGCCAGTCCTGGGGAAAGTGAGCTCTTCTCAGGAAAGACTACAGACCAAGCCTCGTaGCGTCTTTCTCCTCATCTT | + |
Preference number: 4 (lower is better) Translates to: GTPSLASPGESELFSGKTTDQAS*RLSPHL Trigger: AAGATGAGGAGAAAGACGGCACGAGGCTTGGTCTGT...AGTCTTTCCTGAGAAGAGCTCACTTTCCCCAGGACTGGCTAATGAAGGGGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056950.14 |
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CDS-3UTR GCA 90 bp | TCTGTGTTTGGATTTGCCTCCCCTGAGCATATCTACTTTGGAGTCTCACATGTGCCAGCCATCTCCTGCTaGAGGATCTTGGCAGCCTCT | + |
Preference number: 4 (lower is better) Translates to: SVFGFASPEHIYFGVSHVPAISC*RILAAS Trigger: AGAGGCTGCCAAGATCCTGCAGCAGGAGATGGCTGG...CACATGTGAGACTCCAAAGTAGATATGCTCAGGGGAGGCAAATCCAAACACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR GCA 90 bp | AGTGGGTCATGGCAGGTGAGCCTGGAGTTTATAGCTTGGTCCTTTTCTTGCCCTACACACAGCACCAATTaGTTCAGGTTGTTGTCCCGG | + |
Preference number: 4 (lower is better) Translates to: SGSWQVSLEFIAWSFSCPTHSTN*FRLLSR Trigger: CCGGGACAACAACCTGAAGCAATTGGTGCTGTGTGT...AGGGCAAGAAAAGGACCAAGCTATAAACTCCAGGCTCACCTGCCATGACCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR GCA 90 bp | GTGTTTGGATTTGCCTCCCCTGAGCATATCTACTTTGGAGTCTCACATGTGCTTGCACCTCAGCTGAGCTaGCCTTCAGGGAAGGGAAGT | + |
Preference number: 4 (lower is better) Translates to: VFGFASPEHIYFGVSHVLAPQLS*PSGKGS Trigger: ACTTCCCTTCCCTGAAGGGCAGCTCAGCTGAGGTGC...AAGCACATGTGAGACTCCAAAGTAGATATGCTCAGGGGAGGCAAATCCAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR GCA 90 bp | CCTCTTCCACCTGAGCCTTGGTTTCCCTTACATCCAACTAAGAACTTGGTGCCTCTGTTTCTCAGAGGATaGCTCCTGTATGGGGCTCTC | + |
Preference number: 4 (lower is better) Translates to: PLPPEPWFPLHPTKNLVPLFLRG*LLYGAL Trigger: GAGAGCCCCATACAGGAGGCATCCTCTGAGAAACAG...AGGCACCAAGTTCTTAGTTGGATGTAAGGGAAACCAAGGCTCAGGTGGAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | CTGAGGCAGGGATGCGGTGCAGGGCTGTCTCTTCAAAACAATACTCTTAGATCTAGCTTTGGGGACAGCTaGTGGACTGAACTTGGAGGT | + |
Preference number: 4 (lower is better) Translates to: LRQGCGAGLSLQNNTLRSSFGDS*WTELGG Trigger: ACCTCCAAGTTCAGTCCAGCAGCTGTCCCCAAAGCT...AGATCTAAGAGTATTGTTTTGAAGAGACAGCCCTGCACCGCATCCCTGCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ACACTGATGACCTGTGGTGTTTCCATCACAGAACAGGCCTTTAATGACCCTCCCGGAACCCTTGAACTCTaGAGAGCTTTGGGGACAGCT | + |
Preference number: 4 (lower is better) Translates to: TLMTCGVSITEQAFNDPPGTLEL*RALGTA Trigger: AGCTGTCCCCAAAGCTCTCCAGAGTTCAAGGGTTCC...GGGAGGGTCATTAAAGGCCTGTTCTGTGATGGAAACACCACAGGTCATCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | CCTCTTCCACCTGAGCCTTGGTTTCCCTTACATCCAACTAAGAACTTGGTGCCTACAGTTTGCGGTCGCTaGAGAGGAAGGCATGGAAGA | + |
Preference number: 4 (lower is better) Translates to: PLPPEPWFPLHPTKNLVPTVCGR*RGRHGR Trigger: TCTTCCATGCCTTCCTCTCCAGCGACCGCAAACTGT...AGGCACCAAGTTCTTAGTTGGATGTAAGGGAAACCAAGGCTCAGGTGGAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 72 bp | ACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTaGTCCATGTGTCCCTGGAGCTGGCTTGGTTGCTTC | + |
Preference number: 4 (lower is better) Translates to: TLPLPILWHWLN*SMCPWSWLGCF Trigger: GAAGCAACCAAGCCAGCTCCAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 72 bp | CTGTGTGGTGACTTTCATCTCCAGCTCACTCCATGCTaGAGGTCACATTCTCTTGAGAGCAGGGCCATTCTG | + |
Preference number: 4 (lower is better) Translates to: LCGDFHLQLTPC*RSHSLESRAIL Trigger: CAGAATGGCCCTGCTCTCAAGAGAATGTGACCTCAAGCATGGAGTGAGCTGGAGATGAAAGTCACCACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR TCA 90 bp | CTGAGGCAGGGATGCGGTGCAGGGCTGTCTCTTCAAAACAATACTCTTAGATCTCCATGGAGTCATAGATaGGCTTGCAGGTCTTCAGCA | + |
Preference number: 4 (lower is better) Translates to: LRQGCGAGLSLQNNTLRSPWSHR*ACRSSA Trigger: TGCTGAAGACCTGCAAGCTCATCTATGACTCCATGG...AGATCTAAGAGTATTGTTTTGAAGAGACAGCCCTGCACCGCATCCCTGCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | AGTAATGAGTCACTGGAACCCAGGACCGGACATCTCATTTCCTCCCCTTTCTCTACACACAGCACCAATTaGTTCAGGTTGTTGTCCCGG | + |
Preference number: 4 (lower is better) Translates to: SNESLEPRTGHLISSPFSTHSTN*FRLLSR Trigger: CCGGGACAACAACCTGAAGCAATTGGTGCTGTGTGT...AGAGAAAGGGGAGGAAATGAGATGTCCGGTCCTGGGTTCCAGTGACTCATTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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CDS-3UTR GCA 90 bp | TTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTGGGGGAGGGGCTTGGTaGAAGGGATTGGGAGTTGTC | + |
Preference number: 4 (lower is better) Translates to: LMTLPLPILWHWLNLSMCGGGAW*KGLGVV Trigger: GACAACTCCCAATCCCTTGCACCAAGCCCCTCCCCC...ACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATTCTGTGTCCTGGCTTTaGTCCGTGGTCCTTGGAGGC | + |
Preference number: 4 (lower is better) Translates to: AFNDPPTPNFMALVELVHSVSWL*SVVLGG Trigger: GCCTCCAAGGACCACGGAGCAAAGCCAGGACACAGA...ATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | TTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGCCTTGGGGGTGGTACTaGGGGTTGTTTGGCCTTCCC | + |
Preference number: 4 (lower is better) Translates to: FNDPPTPNFMALVELVHVPWGWY*GLFGLP Trigger: GGGAAGGCCAAACAACCCCCAGTACCACCCCCAAGG...CACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | TTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTGACCCGCTTCTTCCTTaGGGGTGGTACTGGGGGTTG | + |
Preference number: 4 (lower is better) Translates to: LMTLPLPILWHWLNLSMCDPLLP*GWYWGL Trigger: CAACCCCCAGTACCACCCCCAAGGAAGAAGCGGGTC...ACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | ACTAAGAACTTGGTGCCTCAGGCAATGACTCTACCTGATTGGCTTAGGCATGCTACAGTTTGCGGTCGCTaGAGAGGAAGGCATGGAAGA | + |
Preference number: 4 (lower is better) Translates to: TKNLVPQAMTLPDWLRHATVCGR*RGRHGR Trigger: TCTTCCATGCCTTCCTCTCCAGCGACCGCAAACTGT...AGCATGCCTAAGCCAATCAGGTAGAGTCATTGCCTGAGGCACCAAGTTCTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATTCAGTGCTGGATGTCTaGCGGGCCATCATCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: AFNDPPTPNFMALVELVHSVLDV*RAIISR Trigger: CCTGGAGATGATGGCCCGCCAGACATCCAGCACTGA...ATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 72 bp | GGCTGTCTCTTCAAAACAATACTCTTAGATCTTGGGTaGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTC | + |
Preference number: 4 (lower is better) Translates to: GCLFKTILLDLG*WWNISAPSPRV Trigger: GACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTATTGTTTTGAAGAGACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 72 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATaGGTTGAACTTGTCCATGTGTCCCTGGAGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: AFNDPPTPNFMA*VELVHVSLELA Trigger: AGCCAGCTCCAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 72 bp | CCCTCCCCTCCACTTCTCAGAATTCTCCATGCAGGTTaGAGTAGGTTTCAACACTCTGCTGTAACAGGTGTG | + |
Preference number: 4 (lower is better) Translates to: PSPPLLRILHAG*SRFQHSAVTGV Trigger: CACACCTGTTACAGCAGAGTGTTGAAACCTACTCAAACCTGCATGGAGAATTCTGAGAAGTGGAGGGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR TCA 90 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGGTCCCTGTCTGTTaGAGTCCCCACATTCTGGCT | + |
Preference number: 4 (lower is better) Translates to: AFNDPPTPNFMALVELVHVVPVC*SPHILA Trigger: AGCCAGAATGTGGGGACTTCAACAGACAGGGACCAC...ATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATAGTCCTGCACCAGGCTaGCGAAGTAGGAGCTCTTGT | + |
Preference number: 4 (lower is better) Translates to: AFNDPPTPNFMALVELVHSPAPG*RSRSSC Trigger: ACAAGAGCTCCTACTTCGGCAGCCTGGTGCAGGACT...ATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGGTATGCTGTCAGCATaGCTGGCTTTGGCCTCTGTG | + |
Preference number: 4 (lower is better) Translates to: AFNDPPTPNFMALVELVHGMLSA*LALASV Trigger: CACAGAGGCCAAAGCCAGCCATGCTGACAGCATACC...ATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
CDS-3UTR CCA 90 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATCCAGGGCTCCGTAGGTaGTGGTCAGATAGTAGGAAC | + |
Preference number: 4 (lower is better) Translates to: AFNDPPTPNFMALVELVHPGLRR*WSDSRN Trigger: GTTCCTACTATCTGACCACCACCTACGGAGCCCTGG...ATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
3UTR CAA 72 bp | TTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTaGAACTTGTCCATGTGTCCCTGGAGCTGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: LMTLPLPILWHW*NLSMCPWSWLG Trigger: ACCAAGCCAGCTCCAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
CDS-3UTR TCA 90 bp | GACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTCCCTGCTCAAACACAAGAACTaGGCCTTCCAGGTACAGTAT | + |
Preference number: 4 (lower is better) Translates to: DPPTPNFMALVELVHVSLLKHKN*AFQVQY Trigger: ATACTGTACCTGGAAGGCTCAGTTCTTGTGTTTGAG...CAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
CDS-3UTR TCA 90 bp | ACACTGATGACCTGTGGTGTTTCCATCACAGAACAGGCCTTTAATGACCCTCCCCTCAAACACAAGAACTaGGCCTTCCAGGTACAGTAT | + |
Preference number: 4 (lower is better) Translates to: TLMTCGVSITEQAFNDPPLKHKN*AFQVQY Trigger: ATACTGTACCTGGAAGGCTCAGTTCTTGTGTTTGAG...GGGAGGGTCATTAAAGGCCTGTTCTGTGATGGAAACACCACAGGTCATCAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | TTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGCTAGCTGGTTCTCCTTaGGCTGCTGCAGTGAGCCAT | + |
Preference number: 4 (lower is better) Translates to: FNDPPTPNFMALVELVHVLAGSP*AAAVSH Trigger: ATGGCTCACTGCAGCAGCTCAAGGAGAACCAGCTAG...CACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | TCTGTGTTTGGATTTGCCTCCCCTGAGCATATCTACTTTGGAGTCTCACATGTGACAGACCAAGCCTCGTaGCGTCTTTCTCCTCATCTT | + |
Preference number: 4 (lower is better) Translates to: SVFGFASPEHIYFGVSHVTDQAS*RLSPHL Trigger: AAGATGAGGAGAAAGACGGCACGAGGCTTGGTCTGT...CACATGTGAGACTCCAAAGTAGATATGCTCAGGGGAGGCAAATCCAAACACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR GCA 90 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATAGCTTTGGGGACAGCTaGTGGACTGAACTTGGAGGT | + |
Preference number: 4 (lower is better) Translates to: AFNDPPTPNFMALVELVHSFGDS*WTELGG Trigger: ACCTCCAAGTTCAGTCCAGCAGCTGTCCCCAAAGCT...ATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGGCCCAGGTTGGAGATaGTCTCAAGTTCAAGGAAGC | + |
Preference number: 4 (lower is better) Translates to: AFNDPPTPNFMALVELVHGPGWR*SQVQGS Trigger: GCTTCCTTGAACTTGAGACCATCTCCAACCTGGGCC...ATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | TTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGCCTCCTCTGCACTGCTaGTTGAGTAGGAGTCCTGGT | + |
Preference number: 4 (lower is better) Translates to: FNDPPTPNFMALVELVHVPPLHC*LSRSPG Trigger: ACCAGGACTCCTACTCAACCAGCAGTGCAGAGGAGG...CACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CCA 90 bp | TTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTCCTCCTCTGCACTGCTaGTTGAGTAGGAGTCCTGGT | + |
Preference number: 4 (lower is better) Translates to: LMTLPLPILWHWLNLSMCPPLHC*LSRSPG Trigger: ACCAGGACTCCTACTCAACCAGCAGTGCAGAGGAGG...ACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
CDS-3UTR TCA 90 bp | ACTAAGAACTTGGTGCCTCAGGCAATGACTCTACCTGATTGGCTTAGGCATGCTGCAGTAAGTCTCTACTaGCACAGTAGAACGCAATCA | + |
Preference number: 4 (lower is better) Translates to: TKNLVPQAMTLPDWLRHAAVSLY*HSRTQS Trigger: TGATTGCGTTCTACTGTGTCAGTAGAGACTTACTGC...AGCATGCCTAAGCCAATCAGGTAGAGTCATTGCCTGAGGCACCAAGTTCTTAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | TCATTTATCAAATGGGTTTCTCCTCCTCTTCCTCCTCCTCCTTTTGGTATAAAAGGGGCAGCCGTAGAGTaGAGGGCAGTAAGTCTCTAC | + |
Preference number: 4 (lower is better) Translates to: SFIKWVSPPLPPPPFGIKGAAVE*RAVSLY Trigger: GTAGAGACTTACTGCCCTTCACTCTACGGCTGCCCC...TTTTATACCAAAAGGAGGAGGAGGAAGAGGAGGAGAAACCCATTTGATAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR GCA 90 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATACACACAGCACCAATTaGTTCAGGTTGTTGTCCCGG | + |
Preference number: 4 (lower is better) Translates to: AFNDPPTPNFMALVELVHTHSTN*FRLLSR Trigger: CCGGGACAACAACCTGAAGCAATTGGTGCTGTGTGT...ATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 72 bp | GCCCGTTATCAGTCACTCCCATCCAGTGTTAATGGTTaGAATGTGAACTATCCATTGCGGGCTCATGGGTTT | + |
Preference number: 4 (lower is better) Translates to: ARYQSLPSSVNG*NVNYPLRAHGF Trigger: AAACCCATGAGCCCGCAATGGATAGTTCACATTCAAACCATTAACACTGGATGGGAGTGACTGATAACGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR TCA 90 bp | ACTAAGAACTTGGTGCCTCAGGCAATGACTCTACCTGATTGGCTTAGGCATGCTAGAACGCAATCAGTCTaGAGATGTCCTCAAACACAA | + |
Preference number: 4 (lower is better) Translates to: TKNLVPQAMTLPDWLRHARTQSV*RCPQTQ Trigger: TTGTGTTTGAGGACATCTTCAGACTGATTGCGTTCT...AGCATGCCTAAGCCAATCAGGTAGAGTCATTGCCTGAGGCACCAAGTTCTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR TCA 90 bp | GCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGATTTTCTTCCCTGGTaGGTAGGCTTTGTGCATGCT | + |
Preference number: 4 (lower is better) Translates to: AFNDPPTPNFMALVELVHDFLPW*VGFVHA Trigger: AGCATGCACAAAGCCTACTCACCAGGGAAGAAAATC...ATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR GCA 90 bp | TTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTAGTAGGCTTTGTGCATaGTGGTCAGCTTCTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: LMTLPLPILWHWLNLSMCSRLCA*WSASAG Trigger: TCCTGCAGAAGCTGACCAGCATGCACAAAGCCTACT...ACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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3UTR CAA 72 bp | CTGGAGTTTATAGCTTGGTCCTTTTCTTGCCCTCTCTaGCTTTTTGGTGGAGATGTGGAAGATGTCCTAGTC | + |
Preference number: 4 (lower is better) Translates to: LEFIAWSFSCPL*LFGGDVEDVLV Trigger: GACTAGGACATCTTCCACATCTCCACCAAAAAGCAAGAGAGGGCAAGAAAAGGACCAAGCTATAAACTCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR CCA 90 bp | TTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTAGGTCTTCAGCAAGATaGAGATTTTCTTCCCTGGTG | + |
Preference number: 4 (lower is better) Translates to: LMTLPLPILWHWLNLSMCRSSAR*RFSSLV Trigger: CACCAGGGAAGAAAATCTCCATCTTGCTGAAGACCT...ACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 90 bp | CGGGAGGCCCGCGCTTTGTTGAGCGTGCGCCTGCGTTCCCAGCGATaGATGGAGTCCTGCACCTCCACGCTCAGCTGTCGGGTCACTGTG | + |
Preference number: 5 (lower is better) Translates to: REARALLSVRLRSQR*MESCTSTLSCRVTV Trigger: CACAGTGACCCGACAGCTGAGCGTGGAGGTGCAGGACTCCATCCATCGCTGGGAACGCAGGCGCACGCTCAACAAAGCGCGGGCCTCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 90 bp | CACGTTGGGGCTGCTGAACTCCAGCTCCTCCTCTGCACTGCTGGTTaGGTAGGAGTCCTGGTCAGCGGCCGAGGCAGGCACCCCCAGGCT | + |
Preference number: 5 (lower is better) Translates to: HVGAAELQLLLCTAG*VGVLVSGRGRHPQA Trigger: AGCCTGGGGGTGCCTGCCTCGGCCGCTGACCAGGACTCCTACTCAACCAGCAGTGCAGAGGAGGAGCTGGAGTTCAGCAGCCCCAACGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 90 bp | CCAGGTCGGTGGTGGTGGTGGCCAGGACCACTAGCTGGTTCTCCTTaGGCTGCTGCAGTGAGCCATCCCGGCTGTGGATCTCCAGCAGGC | + |
Preference number: 5 (lower is better) Translates to: PGRWWWWPGPLAGSP*AAAVSHPGCGSPAG Trigger: GCCTGCTGGAGATCCACAGCCGGGATGGCTCACTGCAGCAGCTCAAGGAGAACCAGCTAGTGGTCCTGGCCACCACCACCACCGACCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 90 bp | TCAGCGGCCGAGGCAGGCACCCCCAGGCTGTCTGAGAGTGAGGCCTaGGAACCCTTGAACTCTGGAGAGCTTTGGGGACAGCTGCTGGAC | + |
Preference number: 5 (lower is better) Translates to: SAAEAGTPRLSESEA*EPLNSGELWGQLLD Trigger: GTCCAGCAGCTGTCCCCAAAGCTCTCCAGAGTTCAAGGGTTCCCAGGCCTCACTCTCAGACAGCCTGGGGGTGCCTGCCTCGGCCGCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | CCCGAGGGTCAGGGAGCAGCTGGGGCCAGGAACCCCTTCATTAGCCAGTCCTGGAGCATCTCAGTGAGGTaGCTGCGGGCCAGCACGTAC | + |
Preference number: 5 (lower is better) Translates to: PEGQGAAGARNPFISQSWSISVR*LRASTY Trigger: GTACGTGCTGGCCCGCAGCAACCTCACTGAGATGCT...CCAGGACTGGCTAATGAAGGGGTTCCTGGCCCCAGCTGCTCCCTGACCCTCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTGAGGCCCGCGCTTTGTaGAGCGTGCGCCTGCGTTCC | + |
Preference number: 5 (lower is better) Translates to: VPGAGLVASSGAQEPRCTEARAL*SVRLRS Trigger: GGAACGCAGGCGCACGCTCAACAAAGCGCGGGCCTC...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 90 bp | GCTGCAGCCACACAGGGCAGGTCTTCACCAGCTTCTCCAGGACACTaGTGCCCCGGCGTGGGATGCAGTTCCTCGGGGTGGTTGACAGAC | + |
Preference number: 5 (lower is better) Translates to: AAATQGRSSPASPGH*CPGVGCSSSGWLTD Trigger: GTCTGTCAACCACCCCGAGGAACTGCATCCCACGCCGGGGCATCAGTGTCCTGGAGAAGCTGGTGAAGACCTGCCCTGTGTGGCTGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056950.14 ENSMUST00000101114.11 ENSMUST00000150795.8 |
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CDS TCA 90 bp | GCAGCGCCCGTCCACCAGCACGAAGAGCCGGTAGTCTTGGGGCTGTaGCACCTCAAACTTCTCAGCGCACTGTGCACACAGTGCCTGGGC | + |
Preference number: 5 (lower is better) Translates to: AAPVHQHEEPVVLGL*HLKLLSALCTQCLG Trigger: GCCCAGGCACTGTGTGCACAGTGCGCTGAGAAGTTTGAGGTGTCACAGCCCCAAGACTACCGGCTCTTCGTGCTGGTGGACGGGCGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 90 bp | GTGGTCACACCCAGGTCGGTGGTGGTGGTGGCCAGGACCACTAGCTaGTTCTCCTTGAGCTGCTGCAGTGAGCCATCCCGGCTGTGGATC | + |
Preference number: 5 (lower is better) Translates to: VVTPRSVVVVARTTS*FSLSCCSEPSRLWI Trigger: GATCCACAGCCGGGATGGCTCACTGCAGCAGCTCAAGGAGAACCAGCTAGTGGTCCTGGCCACCACCACCACCGACCTGGGTGTGACCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 90 bp | AGGGGTCCCAGGGGCTGGGCTTCTGAGTGGCTCTGCAGAGCCTCTTaGGTTCAGCGAGGAGTCCCAGAAACCCAGGCCCAGGTTGGAGAT | + |
Preference number: 5 (lower is better) Translates to: RGPRGWASEWLCRAS*VQRGVPETQAQVGD Trigger: ATCTCCAACCTGGGCCTGGGTTTCTGGGACTCCTCGCTGAACTCAAGAGGCTCTGCAGAGCCACTCAGAAGCCCAGCCCCTGGGACCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS GCA 90 bp | GTGGTGGTGGTGGCCAGGACCACTAGCTGGTTCTCCTTGAGCTGCTaGAGTGAGCCATCCCGGCTGTGGATCTCCAGCAGGCTGGAGTTG | + |
Preference number: 5 (lower is better) Translates to: VVVVARTTSWFSLSC*SEPSRLWISSRLEL Trigger: CAACTCCAGCCTGCTGGAGATCCACAGCCGGGATGGCTCACTGCAGCAGCTCAAGGAGAACCAGCTAGTGGTCCTGGCCACCACCACCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 90 bp | GCCGGGAGACCCGCTTCTTCCTTGGGGGTGGTACTGGGGGTTGTTTaGCCTTCCCAGGAGGCACTGGTATGCTGTCAGCATGGCTGGCTT | + |
Preference number: 5 (lower is better) Translates to: AGRPASSLGVVLGVV*PSQEALVCCQHGWL Trigger: AAGCCAGCCATGCTGACAGCATACCAGTGCCTCCTGGGAAGGCCAAACAACCCCCAGTACCACCCCCAAGGAAGAAGCGGGTCTCCCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 90 bp | GGCTGTGACACCTCAAACTTCTCAGCGCACTGTGCACACAGTGCCTaGGCTGCTGTGTCTGCCCGTGACGCCAGTGTCCGTGACTGCTGC | + |
Preference number: 5 (lower is better) Translates to: GCDTSNFSAHCAHSA*AAVSARDASVRDCC Trigger: GCAGCAGTCACGGACACTGGCGTCACGGGCAGACACAGCAGCCCAGGCACTGTGTGCACAGTGCGCTGAGAAGTTTGAGGTGTCACAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | CCCGAGGGTCAGGGAGCAGCTGGGGCCAGGAACCCCTTCATTAGCCAGTCCTGGCTATACAGGGCTGGCTaGAAGCATCCTTGCCGCTGT | + |
Preference number: 5 (lower is better) Translates to: PEGQGAAGARNPFISQSWLYRAG*KHPCRC Trigger: ACAGCGGCAAGGATGCTTCAAGCCAGCCCTGTATAG...CCAGGACTGGCTAATGAAGGGGTTCCTGGCCCCAGCTGCTCCCTGACCCTCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 90 bp | CAGGACACTGATGCCCCGGCGTGGGATGCAGTTCCTCGGGGTGGTTaGCAGACCAAGCCTCGTGCCGTCTTTCTCCTCATCTTCCTCTCC | + |
Preference number: 5 (lower is better) Translates to: QDTDAPAWDAVPRGG*QTKPRAVFLLIFLS Trigger: GGAGAGGAAGATGAGGAGAAAGACGGCACGAGGCTTGGTCTGTCAACCACCCCGAGGAACTGCATCCCACGCCGGGGCATCAGTGTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056950.14 ENSMUST00000101114.11 ENSMUST00000150795.8 |
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CDS CCA 90 bp | ATGGCTGGCTTTGGCCTCTGTGTCCTGGCTTTGCTCCGTGGTCCTTaGAGGCCTGTCCCCAAGGCTACTTACGGTGCTCTGGGGAGGAAG | + |
Preference number: 5 (lower is better) Translates to: MAGFGLCVLALLRGP*RPVPKATYGALGRK Trigger: CTTCCTCCCCAGAGCACCGTAAGTAGCCTTGGGGACAGGCCTCCAAGGACCACGGAGCAAAGCCAGGACACAGAGGCCAAAGCCAGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 90 bp | TGGCCTTCCCAGGAGGCACTGGTATGCTGTCAGCATGGCTGGCTTTaGCCTCTGTGTCCTGGCTTTGCTCCGTGGTCCTTGGAGGCCTGT | + |
Preference number: 5 (lower is better) Translates to: WPSQEALVCCQHGWL*PLCPGFAPWSLEAC Trigger: ACAGGCCTCCAAGGACCACGGAGCAAAGCCAGGACACAGAGGCCAAAGCCAGCCATGCTGACAGCATACCAGTGCCTCCTGGGAAGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 90 bp | TCCACCACCTTCTTATACAGTTTGCGGTCGCTGGAGAGGAAGGCATaGAAGACGCTGGCGAAGCTGACGAAGCTGAGGCGGTGGCGGGCC | + |
Preference number: 5 (lower is better) Translates to: STTFLYSLRSLERKA*KTLAKLTKLRRWRA Trigger: GGCCCGCCACCGCCTCAGCTTCGTCAGCTTCGCCAGCGTCTTCCATGCCTTCCTCTCCAGCGACCGCAAACTGTATAAGAAGGTGGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | CCCGAGGGTCAGGGAGCAGCTGGGGCCAGGAACCCCTTCATTAGCCAGTCCTGGGGTTCCACCAAGGCTTaGAGTTCAGTGCTCTGTAGC | + |
Preference number: 5 (lower is better) Translates to: PEGQGAAGARNPFISQSWGSTKA*SSVLCS Trigger: GCTACAGAGCACTGAACTCAAAGCCTTGGTGGAACC...CCAGGACTGGCTAATGAAGGGGTTCCTGGCCCCAGCTGCTCCCTGACCCTCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | AGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTCTAGCCTCCTCTCAGGAGATCTCCAGCAGGCTGGAGTaGATGGCCTCCTTCAGGGGC | + |
Preference number: 5 (lower is better) Translates to: RAANESPVPIPLASSQEISSRLE*MASFRG Trigger: GCCCCTGAAGGAGGCCATCAACTCCAGCCTGCTGGA...GATCTCCTGAGAGGAGGCTAGAGGGATTGGGACTGGGCTCTCATTGGCCGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 90 bp | AGGCAGGCACCCCCAGGCTGTCTGAGAGTGAGGCCTGGGAACCCTTaGACTCTGGAGAGCTTTGGGGACAGCTGCTGGACTGAACTTGGA | + |
Preference number: 5 (lower is better) Translates to: RQAPPGCLRVRPGNP*TLESFGDSCWTELG Trigger: TCCAAGTTCAGTCCAGCAGCTGTCCCCAAAGCTCTCCAGAGTTCAAGGGTTCCCAGGCCTCACTCTCAGACAGCCTGGGGGTGCCTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 90 bp | CGCACTACTATACAGGGCTGGCTTGAAGCATCCTTGCCGCTGTCCTaGGGCCGGTACACGAAGTGGAAGTCTCGTTTGGGCTCGCTCCGA | + |
Preference number: 5 (lower is better) Translates to: RTTIQGWLEASLPLS*GRYTKWKSRLGSLR Trigger: TCGGAGCGAGCCCAAACGAGACTTCCACTTCGTGTACCGGCCCCAGGACAGCGGCAAGGATGCTTCAAGCCAGCCCTGTATAGTAGTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | CCTGAGAGCACAGAAAGGCTGGCAAAGCTGCGCCTTGCCTGTACCAGGGCCAGGACCAATTGCTTCAGGTaGTTGTCCCGGCACACCAGG | + |
Preference number: 5 (lower is better) Translates to: PESTERLAKLRLACTRARTNCFR*LSRHTR Trigger: CCTGGTGTGCCGGGACAACAACCTGAAGCAATTGGT...CCTGGCCCTGGTACAGGCAAGGCGCAGCTTTGCCAGCCTTTCTGTGCTCTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS-3UTR CAA 90 bp | TGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCACTCTGGTAGCTTTTGCTCCGTGGTCCTaGGAGGCCTGTCCCCAAGGC | + |
Preference number: 5 (lower is better) Translates to: WLLPVELRSPVVLGTLVAFAPWS*EACPQG Trigger: GCCTTGGGGACAGGCCTCCAAGGACCACGGAGCAAA...AGCTACCAGAGTGCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | GGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTGCTGCTGGACTGAACTaGGAGGTGCTGCATGCCAGC | + |
Preference number: 5 (lower is better) Translates to: GRDVWLRRAANESPVPIPAAGLN*EVLHAS Trigger: GCTGGCATGCAGCACCTCCAAGTTCAGTCCAGCAGC...AGGGATTGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTGAGGCCTGGGAACCCTaGAACTCTGGAGAGCTTTGG | + |
Preference number: 5 (lower is better) Translates to: VPGAGLVASSGAQEPRCTEAWEP*NSGELW Trigger: CCAAAGCTCTCCAGAGTTCAAGGGTTCCCAGGCCTC...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
||
CDS-3UTR CAA 90 bp | GAGACAGGACCAGGAGAATTGCCTGAGGAACCTGGTGTGAGCAGGGTTGGGCTTTCCAGCAGGCTGGAGTaGATGGCCTCCTTCAGGGGC | + |
Preference number: 5 (lower is better) Translates to: ETGPGELPEEPGVSRVGLSSRLE*MASFRG Trigger: GCCCCTGAAGGAGGCCATCAACTCCAGCCTGCTGGA...AAGCCCAACCCTGCTCACACCAGGTTCCTCAGGCAATTCTCCTGGTCCTGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | GGAACCCCTTCATTAGCCAGTCCTGGGGAAAGTGAGCTCTTCTCAGGAAAGACTCGGGAGGCCCGCGCTTaGTTGAGCGTGCGCCTGCGT | + |
Preference number: 5 (lower is better) Translates to: GTPSLASPGESELFSGKTREARA*LSVRLR Trigger: ACGCAGGCGCACGCTCAACAAAGCGCGGGCCTCCCG...AGTCTTTCCTGAGAAGAGCTCACTTTCCCCAGGACTGGCTAATGAAGGGGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | ATACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCCGGGAGGCCCGCGCTTaGTTGAGCGTGCGCCTGCGT | + |
Preference number: 5 (lower is better) Translates to: ILLDLGLWWNISAPSPRVREARA*LSVRLR Trigger: ACGCAGGCGCACGCTCAACAAAGCGCGGGCCTCCCG...GACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 90 bp | GAAGCTGACGAAGCTGAGGCGGTGGCGGGCCTTGTCCAGGATCATTaGGGGTTTCTTCTTCACGTTGGGGCTGCTGAACTCCAGCTCCTC | + |
Preference number: 5 (lower is better) Translates to: EADEAEAVAGLVQDH*GFLLHVGAAELQLL Trigger: GAGGAGCTGGAGTTCAGCAGCCCCAACGTGAAGAAGAAACCCTCAATGATCCTGGACAAGGCCCGCCACCGCCTCAGCTTCGTCAGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 90 bp | AGTAGGCTTTGTGCATGCTGGTCAGCTTCTGCAGGATCTTCTCCATaGCAGCCACCTCAGGCACGCTGGTGGTCACACCCAGGTCGGTGG | + |
Preference number: 5 (lower is better) Translates to: SRLCACWSASAGSSP*QPPQARWWSHPGRW Trigger: CCACCGACCTGGGTGTGACCACCAGCGTGCCTGAGGTGGCTGTCATGGAGAAGATCCTGCAGAAGCTGACCAGCATGCACAAAGCCTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS GCA 90 bp | GTGCTGCATGCCAGCTTGCCGGACAGGACTCAAGCCTTCCCAAGATaGACCAGTCGCCTGTTTCTCAGAGGATGCCTCCTGTATGGGGCT | + |
Preference number: 5 (lower is better) Translates to: VLHASLPDRTQAFPR*TSRLFLRGCLLYGA Trigger: AGCCCCATACAGGAGGCATCCTCTGAGAAACAGGCGACTGGTGCATCTTGGGAAGGCTTGAGTCCTGTCCGGCAAGCTGGCATGCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS GCA 90 bp | GAGAGCTTTGGGGACAGCTGCTGGACTGAACTTGGAGGTGCTGCATaGCAGCTTGCCGGACAGGACTCAAGCCTTCCCAAGATGCACCAG | + |
Preference number: 5 (lower is better) Translates to: ESFGDSCWTELGGAA*QLAGQDSSLPKMHQ Trigger: CTGGTGCATCTTGGGAAGGCTTGAGTCCTGTCCGGCAAGCTGGCATGCAGCACCTCCAAGTTCAGTCCAGCAGCTGTCCCCAAAGCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 90 bp | GGGTACTCCAGCACCTCAGCTGAGCTGCCCTTCAGGGAAGGGAAGTaGACACACAGCACCAATTGCTTCAGGTTGTTGTCCCGGCACACC | + |
Preference number: 5 (lower is better) Translates to: GYSSTSAELPFREGK*THSTNCFRLLSRHT Trigger: GGTGTGCCGGGACAACAACCTGAAGCAATTGGTGCTGTGTGTCCACTTCCCTTCCCTGAAGGGCAGCTCAGCTGAGGTGCTGGAGTACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056950.14 ENSMUST00000101114.11 ENSMUST00000133820.2 ENSMUST00000150795.8 |
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CDS CCA 90 bp | GTTGTTTGGCCTTCCCAGGAGGCACTGGTATGCTGTCAGCATGGCTaGCTTTGGCCTCTGTGTCCTGGCTTTGCTCCGTGGTCCTTGGAG | + |
Preference number: 5 (lower is better) Translates to: VVWPSQEALVCCQHG*LWPLCPGFAPWSLE Trigger: CTCCAAGGACCACGGAGCAAAGCCAGGACACAGAGGCCAAAGCCAGCCATGCTGACAGCATACCAGTGCCTCCTGGGAAGGCCAAACAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | GTCCCTGGAGCTGGCTTGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGTGGTCCCTGTCTGTaGAAGTCCCCACATTCTGGC | + |
Preference number: 5 (lower is better) Translates to: VPGAGLVASSGAQEPRCTSGPCL*KSPHSG Trigger: GCCAGAATGTGGGGACTTCAACAGACAGGGACCACT...AGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCAAGCCAGCTCCAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | GAGACAGGACCAGGAGAATTGCCTGAGGAACCTGGTGTGAGCAGGGTTGGGCTTCTCTGTGTCCTGGCTTaGCTCCGTGGTCCTTGGAGG | + |
Preference number: 5 (lower is better) Translates to: ETGPGELPEEPGVSRVGLLCVLA*LRGPWR Trigger: CCTCCAAGGACCACGGAGCAAAGCCAGGACACAGAG...AAGCCCAACCCTGCTCACACCAGGTTCCTCAGGCAATTCTCCTGGTCCTGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | GAGACAGGACCAGGAGAATTGCCTGAGGAACCTGGTGTGAGCAGGGTTGGGCTTAGACCCGCTTCTTCCTaGGGGGTGGTACTGGGGGTT | + |
Preference number: 5 (lower is better) Translates to: ETGPGELPEEPGVSRVGLRPASS*GVVLGV Trigger: AACCCCCAGTACCACCCCCAAGGAAGAAGCGGGTCT...AAGCCCAACCCTGCTCACACCAGGTTCCTCAGGCAATTCTCCTGGTCCTGTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | CTAGATGGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCAAGACCCGCTTCTTCCTaGGGGGTGGTACTGGGGGTT | + |
Preference number: 5 (lower is better) Translates to: LDGRDVWLRRAANESPVPRPASS*GVVLGV Trigger: AACCCCCAGTACCACCCCCAAGGAAGAAGCGGGTCT...TGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCCATCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | GGAACCCCTTCATTAGCCAGTCCTGGGGAAAGTGAGCTCTTCTCAGGAAAGACTGAGGCCCGCGCTTTGTaGAGCGTGCGCCTGCGTTCC | + |
Preference number: 5 (lower is better) Translates to: GTPSLASPGESELFSGKTEARAL*SVRLRS Trigger: GGAACGCAGGCGCACGCTCAACAAAGCGCGGGCCTC...AGTCTTTCCTGAGAAGAGCTCACTTTCCCCAGGACTGGCTAATGAAGGGGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 90 bp | TGGGAACCCTTGAACTCTGGAGAGCTTTGGGGACAGCTGCTGGACTaGACTTGGAGGTGCTGCATGCCAGCTTGCCGGACAGGACTCAAG | + |
Preference number: 5 (lower is better) Translates to: WEPLNSGELWGQLLD*TWRCCMPACRTGLK Trigger: CTTGAGTCCTGTCCGGCAAGCTGGCATGCAGCACCTCCAAGTTCAGTCCAGCAGCTGTCCCCAAAGCTCTCCAGAGTTCAAGGGTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS GCA 90 bp | GCTGAGCTGCCCTTCAGGGAAGGGAAGTGGACACACAGCACCAATTaGTTCAGGTTGTTGTCCCGGCACACCAGGAACATCCCAGCCATC | + |
Preference number: 5 (lower is better) Translates to: AELPFREGKWTHSTN*FRLLSRHTRNIPAI Trigger: GATGGCTGGGATGTTCCTGGTGTGCCGGGACAACAACCTGAAGCAATTGGTGCTGTGTGTCCACTTCCCTTCCCTGAAGGGCAGCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056950.14 ENSMUST00000101114.11 ENSMUST00000150795.8 |
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CDS GCA 90 bp | AGTTGGGTTCCCGCACTACTATACAGGGCTGGCTTGAAGCATCCTTaGCGCTGTCCTGGGGCCGGTACACGAAGTGGAAGTCTCGTTTGG | + |
Preference number: 5 (lower is better) Translates to: SWVPALLYRAGLKHP*RCPGAGTRSGSLVW Trigger: CCAAACGAGACTTCCACTTCGTGTACCGGCCCCAGGACAGCGGCAAGGATGCTTCAAGCCAGCCCTGTATAGTAGTGCGGGAACCCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 90 bp | TCCGTGGTCCTTGGAGGCCTGTCCCCAAGGCTACTTACGGTGCTCTaGGGAGGAAGGTTGAGTGATGCTGTCCTAGAAATGCCTGAGTGG | + |
Preference number: 5 (lower is better) Translates to: SVVLGGLSPRLLTVL*GGRLSDAVLEMPEW Trigger: CCACTCAGGCATTTCTAGGACAGCATCACTCAACCTTCCTCCCCAGAGCACCGTAAGTAGCCTTGGGGACAGGCCTCCAAGGACCACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 90 bp | AGGAAGGCATGGAAGACGCTGGCGAAGCTGACGAAGCTGAGGCGGTaGCGGGCCTTGTCCAGGATCATTGAGGGTTTCTTCTTCACGTTG | + |
Preference number: 5 (lower is better) Translates to: RKAWKTLAKLTKLRR*RALSRIIEGFFFTL Trigger: CAACGTGAAGAAGAAACCCTCAATGATCCTGGACAAGGCCCGCCACCGCCTCAGCTTCGTCAGCTTCGCCAGCGTCTTCCATGCCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | GTGAGCAGGGTTGGGCTTGTTTGCTGCAGCTGGCAAGAGCCTCTTCCACCTGAGAGTGGTCCCTGTCTGTaGAAGTCCCCACATTCTGGC | + |
Preference number: 5 (lower is better) Translates to: VSRVGLVCCSWQEPLPPESGPCL*KSPHSG Trigger: GCCAGAATGTGGGGACTTCAACAGACAGGGACCACT...CTCAGGTGGAAGAGGCTCTTGCCAGCTGCAGCAAACAAGCCCAACCCTGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | AGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGGGAGCAGAGGCCTGGGAACCCTaGAACTCTGGAGAGCTTTGG | + |
Preference number: 5 (lower is better) Translates to: RSWVVVEHLSSIPEGQGAEAWEP*NSGELW Trigger: CCAAAGCTCTCCAGAGTTCAAGGGTTCCCAGGCCTC...TGCTCCCTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | TGGTTGCTTCCAGTGGAGCTCAGGAGCCCCGTTGTACTAGGCACTCTGGTAGCTCCTCTGCACTGCTGGTaGAGTAGGAGTCCTGGTCAG | + |
Preference number: 5 (lower is better) Translates to: WLLPVELRSPVVLGTLVAPLHCW*SRSPGQ Trigger: CTGACCAGGACTCCTACTCAACCAGCAGTGCAGAGG...AGCTACCAGAGTGCCTAGTACAACGGGGCTCCTGAGCTCCACTGGAAGCAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | AGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTCTAGCCTCCTCTCAGGAGATCAAGTGGAAGTCTCGTTaGGGCTCGCTCCGAAGCAGA | + |
Preference number: 5 (lower is better) Translates to: RAANESPVPIPLASSQEIKWKSR*GSLRSR Trigger: TCTGCTTCGGAGCGAGCCCAAACGAGACTTCCACTT...GATCTCCTGAGAGGAGGCTAGAGGGATTGGGACTGGGCTCTCATTGGCCGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | AGAGCGGCCAATGAGAGCCCAGTCCCAATCCCTCTAGCCTCCTCTCAGGAGATCCTATACAGGGCTGGCTaGAAGCATCCTTGCCGCTGT | + |
Preference number: 5 (lower is better) Translates to: RAANESPVPIPLASSQEILYRAG*KHPCRC Trigger: ACAGCGGCAAGGATGCTTCAAGCCAGCCCTGTATAG...GATCTCCTGAGAGGAGGCTAGAGGGATTGGGACTGGGCTCTCATTGGCCGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | CTAGATGGCAGGGATGTGTGGTTAAGGAGAGCGGCCAATGAGAGCCCAGTCCCAACCAATTGCTTCAGGTaGTTGTCCCGGCACACCAGG | + |
Preference number: 5 (lower is better) Translates to: LDGRDVWLRRAANESPVPTNCFR*LSRHTR Trigger: CCTGGTGTGCCGGGACAACAACCTGAAGCAATTGGT...TGGGACTGGGCTCTCATTGGCCGCTCTCCTTAACCACACATCCCTGCCATCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | ATACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCTTTGCTCCGTGGTCCTaGGAGGCCTGTCCCCAAGGC | + |
Preference number: 5 (lower is better) Translates to: ILLDLGLWWNISAPSPRVFAPWS*EACPQG Trigger: GCCTTGGGGACAGGCCTCCAAGGACCACGGAGCAAA...GACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | ACTCTTAGATCTTGGGTTGTGGTGGAACATCTCAGCTCCATCCCCGAGGGTCAGAGCATCTCAGTGAGGTaGCTGCGGGCCAGCACGTAC | + |
Preference number: 5 (lower is better) Translates to: TLRSWVVVEHLSSIPEGQSISVR*LRASTY Trigger: GTACGTGCTGGCCCGCAGCAACCTCACTGAGATGCT...CTGACCCTCGGGGATGGAGCTGAGATGTTCCACCACAACCCAAGATCTAAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 90 bp | GAGATGGTCTCAAGTTCAAGGAAGCTGCTAGCTTCGAGGATGGCCTaGGGCAGCCGTAGAGTGAAGGGCAGTAAGTCTCTACTGACACAG | + |
Preference number: 5 (lower is better) Translates to: EMVSSSRKLLASRMA*GSRRVKGSKSLLTQ Trigger: CTGTGTCAGTAGAGACTTACTGCCCTTCACTCTACGGCTGCCCCAGGCCATCCTCGAAGCTAGCAGCTTCCTTGAACTTGAGACCATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056950.14 ENSMUST00000101114.11 ENSMUST00000133820.2 |
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CDS CCA 90 bp | CTAGAAATGCCTGAGTGGTCCCTGTCTGTTGAAGTCCCCACATTCTaGCTTTCCAGAGATACCCTCTCAGAAATGCGCCTCCTGGGAGGG | + |
Preference number: 5 (lower is better) Translates to: LEMPEWSLSVEVPTF*LSRDTLSEMRLLGG Trigger: CCCTCCCAGGAGGCGCATTTCTGAGAGGGTATCTCTGGAAAGCCAGAATGTGGGGACTTCAACAGACAGGGACCACTCAGGCATTTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | GACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTCCCTGCTCTGTGTCCTGGCTTaGCTCCGTGGTCCTTGGAGG | + |
Preference number: 5 (lower is better) Translates to: DPPTPNFMALVELVHVSLLCVLA*LRGPWR Trigger: CCTCCAAGGACCACGGAGCAAAGCCAGGACACAGAG...CAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | ACTAAGAACTTGGTGCCTCAGGCAATGACTCTACCTGATTGGCTTAGGCATGCTGGGTGGTACTGGGGGTaGTTTGGCCTTCCCAGGAGG | + |
Preference number: 5 (lower is better) Translates to: TKNLVPQAMTLPDWLRHAGWYWG*FGLPRR Trigger: CCTCCTGGGAAGGCCAAACAACCCCCAGTACCACCC...AGCATGCCTAAGCCAATCAGGTAGAGTCATTGCCTGAGGCACCAAGTTCTTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | AGGCCTTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCGGGTGGTACTGGGGGTaGTTTGGCCTTCCCAGGAGG | + |
Preference number: 5 (lower is better) Translates to: RPLMTLPLPILWHWLNLSGWYWG*FGLPRR Trigger: CCTCCTGGGAAGGCCAAACAACCCCCAGTACCACCC...GGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAAGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | ACACTGATGACCTGTGGTGTTTCCATCACAGAACAGGCCTTTAATGACCCTCCCCCTCTGCACTGCTGGTaGAGTAGGAGTCCTGGTCAG | + |
Preference number: 5 (lower is better) Translates to: TLMTCGVSITEQAFNDPPPLHCW*SRSPGQ Trigger: CTGACCAGGACTCCTACTCAACCAGCAGTGCAGAGG...GGGAGGGTCATTAAAGGCCTGTTCTGTGATGGAAACACCACAGGTCATCAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 90 bp | CAGTATAGCCTTTTCTTCTTTGATGGGGTACTCCAGCACCTCAGCTaGGCTGCCCTTCAGGGAAGGGAAGTGGACACACAGCACCAATTG | + |
Preference number: 5 (lower is better) Translates to: QYSLFFFDGVLQHLS*AALQGREVDTQHQL Trigger: CAATTGGTGCTGTGTGTCCACTTCCCTTCCCTGAAGGGCAGCTCAGCTGAGGTGCTGGAGTACCCCATCAAAGAAGAAAAGGCTATACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056950.14 ENSMUST00000101114.11 ENSMUST00000133820.2 |
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CDS TCA 90 bp | AAAGCTAGCCTTTTCTTCTTTGATGGGGTACTCCAGCACCTCAGCTaGGCTGCCCTTCAGGGAAGGGAAGTGGACACACAGCACCAATTG | + |
Preference number: 5 (lower is better) Translates to: KASLFFFDGVLQHLS*AALQGREVDTQHQL Trigger: CAATTGGTGCTGTGTGTCCACTTCCCTTCCCTGAAGGGCAGCTCAGCTGAGGTGCTGGAGTACCCCATCAAAGAAGAAAAGGCTAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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CDS CCA 90 bp | CTCTGGGGAGGAAGGTTGAGTGATGCTGTCCTAGAAATGCCTGAGTaGTCCCTGTCTGTTGAAGTCCCCACATTCTGGCTTTCCAGAGAT | + |
Preference number: 5 (lower is better) Translates to: LWGGRLSDAVLEMPE*SLSVEVPTFWLSRD Trigger: ATCTCTGGAAAGCCAGAATGTGGGGACTTCAACAGACAGGGACCACTCAGGCATTTCTAGGACAGCATCACTCAACCTTCCTCCCCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | AGTAATGAGTCACTGGAACCCAGGACCGGACATCTCATTTCCTCCCCTTTCTCTACCAATTGCTTCAGGTaGTTGTCCCGGCACACCAGG | + |
Preference number: 5 (lower is better) Translates to: SNESLEPRTGHLISSPFSTNCFR*LSRHTR Trigger: CCTGGTGTGCCGGGACAACAACCTGAAGCAATTGGT...AGAGAAAGGGGAGGAAATGAGATGTCCGGTCCTGGGTTCCAGTGACTCATTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150795.8 |
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CDS-3UTR CAA 90 bp | GGAACCCCTTCATTAGCCAGTCCTGGGGAAAGTGAGCTCTTCTCAGGAAAGACTCTCTGGGGAGGAAGGTaGAGTGATGCTGTCCTAGAA | + |
Preference number: 5 (lower is better) Translates to: GTPSLASPGESELFSGKTLWGGR*SDAVLE Trigger: TTCTAGGACAGCATCACTCAACCTTCCTCCCCAGAG...AGTCTTTCCTGAGAAGAGCTCACTTTCCCCAGGACTGGCTAATGAAGGGGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | ACTAAGAACTTGGTGCCTCAGGCAATGACTCTACCTGATTGGCTTAGGCATGCTACCAATTGCTTCAGGTaGTTGTCCCGGCACACCAGG | + |
Preference number: 5 (lower is better) Translates to: TKNLVPQAMTLPDWLRHATNCFR*LSRHTR Trigger: CCTGGTGTGCCGGGACAACAACCTGAAGCAATTGGT...AGCATGCCTAAGCCAATCAGGTAGAGTCATTGCCTGAGGCACCAAGTTCTTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | GACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTCCCTGCTCTGGGGAGGAAGGTaGAGTGATGCTGTCCTAGAA | + |
Preference number: 5 (lower is better) Translates to: DPPTPNFMALVELVHVSLLWGGR*SDAVLE Trigger: TTCTAGGACAGCATCACTCAACCTTCCTCCCCAGAG...CAGGGACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | CCTCTTCCACCTGAGCCTTGGTTTCCCTTACATCCAACTAAGAACTTGGTGCCTGGTTCCACCAAGGCTTaGAGTTCAGTGCTCTGTAGC | + |
Preference number: 5 (lower is better) Translates to: PLPPEPWFPLHPTKNLVPGSTKA*SSVLCS Trigger: GCTACAGAGCACTGAACTCAAAGCCTTGGTGGAACC...AGGCACCAAGTTCTTAGTTGGATGTAAGGGAAACCAAGGCTCAGGTGGAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | ACTAAGAACTTGGTGCCTCAGGCAATGACTCTACCTGATTGGCTTAGGCATGCTAAGTGGAAGTCTCGTTaGGGCTCGCTCCGAAGCAGA | + |
Preference number: 5 (lower is better) Translates to: TKNLVPQAMTLPDWLRHAKWKSR*GSLRSR Trigger: TCTGCTTCGGAGCGAGCCCAAACGAGACTTCCACTT...AGCATGCCTAAGCCAATCAGGTAGAGTCATTGCCTGAGGCACCAAGTTCTTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | TCATGGCAGGTGAGCCTGGAGTTTATAGCTTGGTCCTTTTCTTGCCCTCTCTTGGTTTCCAGGCCCAGGTaGGAGATGGTCTCAAGTTCA | + |
Preference number: 5 (lower is better) Translates to: SWQVSLEFIAWSFSCPLLVSRPR*EMVSSS Trigger: TGAACTTGAGACCATCTCCAACCTGGGCCTGGAAAC...CAAGAGAGGGCAAGAAAAGGACCAAGCTATAAACTCCAGGCTCACCTGCCATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS TCA 90 bp | GATGAGCTTGCAGGTCTTCAGCAAGATGGAGATTTTCTTCCCTGGTaGGTAGGCTTTGTGCATGCTGGTCAGCTTCTGCAGGATCTTCTC | + |
Preference number: 5 (lower is better) Translates to: DELAGLQQDGDFLPW*VGFVHAGQLLQDLL Trigger: GAGAAGATCCTGCAGAAGCTGACCAGCATGCACAAAGCCTACTCACCAGGGAAGAAAATCTCCATCTTGCTGAAGACCTGCAAGCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | TTTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGAAACCCAGGCCCAGGTaGGAGATGGTCTCAAGTTCA | + |
Preference number: 5 (lower is better) Translates to: FNDPPTPNFMALVELVHVKPRPR*EMVSSS Trigger: TGAACTTGAGACCATCTCCAACCTGGGCCTGGGTTT...CACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS-3UTR CAA 90 bp | TTAATGACCCTCCCACTCCCAATTTTATGGCATTGGTTGAACTTGTCCATGTGTATCATGTACTCCACGTaGAGGAGCATCTCAGTGAGG | + |
Preference number: 5 (lower is better) Translates to: LMTLPLPILWHWLNLSMCIMYST*RSISVR Trigger: CCTCACTGAGATGCTCCTCAACGTGGAGTACATGAT...ACACATGGACAAGTTCAACCAATGCCATAAAATTGGGAGTGGGAGGGTCATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 90 bp | ACAGTAGAACGCAATCAGTCTGAAGATGTCCTCAAACACAAGAACTaGGCCTTCCAGGTACAGTATAGCCTTTTCTTCTTTGATGGGGTA | + |
Preference number: 5 (lower is better) Translates to: TVERNQSEDVLKHKN*AFQVQYSLFFFDGV Trigger: TACCCCATCAAAGAAGAAAAGGCTATACTGTACCTGGAAGGCTCAGTTCTTGTGTTTGAGGACATCTTCAGACTGATTGCGTTCTACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056950.14 ENSMUST00000101114.11 ENSMUST00000133820.2 |
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CDS CCA 72 bp | CCACCTCAGGCACGCTGGTGGTCACACCCAGGTCGGTaGTGGTGGTGGCCAGGACCACTAGCTGGTTCTCCT | + |
Preference number: 6 (lower is better) Translates to: PPQARWWSHPGR*WWWPGPLAGSP Trigger: AGGAGAACCAGCTAGTGGTCCTGGCCACCACCACCACCGACCTGGGTGTGACCACCAGCGTGCCTGAGGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | CGCGCTTTGTTGAGCGTGCGCCTGCGTTCCCAGCGATaGATGGAGTCCTGCACCTCCACGCTCAGCTGTCGG | + |
Preference number: 6 (lower is better) Translates to: RALLSVRLRSQR*MESCTSTLSCR Trigger: CCGACAGCTGAGCGTGGAGGTGCAGGACTCCATCCATCGCTGGGAACGCAGGCGCACGCTCAACAAAGCGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | CCCAGGTCGGTGGTGGTGGTGGCCAGGACCACTAGCTGGTTCTCCTaGAGCTGCTGCAGTGAGCCATCCCGGCTGTGGATCTCCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: PRSVVVVARTTSWFS*SCCSEPSRLWISSR Trigger: CCTGCTGGAGATCCACAGCCGGGATGGCTCACTGCAGCAGCTCAAGGAGAACCAGCTAGTGGTCCTGGCCACCACCACCACCGACCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 72 bp | ACACAGGGCAGGTCTTCACCAGCTTCTCCAGGACACTaGTGCCCCGGCGTGGGATGCAGTTCCTCGGGGTGG | + |
Preference number: 6 (lower is better) Translates to: TQGRSSPASPGH*CPGVGCSSSGW Trigger: CCACCCCGAGGAACTGCATCCCACGCCGGGGCATCAGTGTCCTGGAGAAGCTGGTGAAGACCTGCCCTGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056950.14 ENSMUST00000101114.11 ENSMUST00000150795.8 |
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CDS TCA 72 bp | CAGAGGATGCCTCCTGTATGGGGCTCTCCAAGGGACTaGGAAGGGTTGAGGCCAGCTGCCGGGAGACCCGCT | + |
Preference number: 6 (lower is better) Translates to: QRMPPVWGSPRD*EGLRPAAGRPA Trigger: AGCGGGTCTCCCGGCAGCTGGCCTCAACCCTTCTCAGTCCCTTGGAGAGCCCCATACAGGAGGCATCCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 72 bp | GCTGCTGAACTCCAGCTCCTCCTCTGCACTGCTGGTTaGGTAGGAGTCCTGGTCAGCGGCCGAGGCAGGCAC | + |
Preference number: 6 (lower is better) Translates to: AAELQLLLCTAG*VGVLVSGRGRH Trigger: GTGCCTGCCTCGGCCGCTGACCAGGACTCCTACTCAACCAGCAGTGCAGAGGAGGAGCTGGAGTTCAGCAGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS GCA 72 bp | AGCGTGCGCCTGCGTTCCCAGCGATGGATGGAGTCCTaGACCTCCACGCTCAGCTGTCGGGTCACTGTGATC | + |
Preference number: 6 (lower is better) Translates to: SVRLRSQRWMES*TSTLSCRVTVI Trigger: GATCACAGTGACCCGACAGCTGAGCGTGGAGGTGCAGGACTCCATCCATCGCTGGGAACGCAGGCGCACGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | ACACAGATGAAGTCCTGCACAGAGGAGCGGGAGGCCCGCGCTTTGTaGAGCGTGCGCCTGCGTTCCCAGCGATGGATGGAGTCCTGCACC | + |
Preference number: 6 (lower is better) Translates to: TQMKSCTEEREARAL*SVRLRSQRWMESCT Trigger: GGTGCAGGACTCCATCCATCGCTGGGAACGCAGGCGCACGCTCAACAAAGCGCGGGCCTCCCGCTCCTCTGTGCAGGACTTCATCTGTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | GACACACAGATGAAGTCCTGCACAGAGGAGCGGGAGGCCCGCGCTTaGTTGAGCGTGCGCCTGCGTTCCCAGCGATGGATGGAGTCCTGC | + |
Preference number: 6 (lower is better) Translates to: DTQMKSCTEEREARA*LSVRLRSQRWMESC Trigger: GCAGGACTCCATCCATCGCTGGGAACGCAGGCGCACGCTCAACAAAGCGCGGGCCTCCCGCTCCTCTGTGCAGGACTTCATCTGTGTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | TGCCGGGAGACCCGCTTCTTCCTTGGGGGTGGTACTGGGGGTTGTTaGGCCTTCCCAGGAGGCACTGGTATGCTGTCAGCATGGCTGGCT | + |
Preference number: 6 (lower is better) Translates to: CRETRFFLGGGTGGC*AFPGGTGMLSAWLA Trigger: AGCCAGCCATGCTGACAGCATACCAGTGCCTCCTGGGAAGGCCAAACAACCCCCAGTACCACCCCCAAGGAAGAAGCGGGTCTCCCGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | CAGCTGCCGGGAGACCCGCTTCTTCCTTGGGGGTGGTACTGGGGGTaGTTTGGCCTTCCCAGGAGGCACTGGTATGCTGTCAGCATGGCT | + |
Preference number: 6 (lower is better) Translates to: QLPGDPLLPWGWYWG*FGLPRRHWYAVSMA Trigger: AGCCATGCTGACAGCATACCAGTGCCTCCTGGGAAGGCCAAACAACCCCCAGTACCACCCCCAAGGAAGAAGCGGGTCTCCCGGCAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS GCA 72 bp | GTGGCCAGGACCACTAGCTGGTTCTCCTTGAGCTGCTaGAGTGAGCCATCCCGGCTGTGGATCTCCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: VARTTSWFSLSC*SEPSRLWISSR Trigger: CCTGCTGGAGATCCACAGCCGGGATGGCTCACTGCAGCAGCTCAAGGAGAACCAGCTAGTGGTCCTGGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | CATCTCTTCTTCTCCAAAGGGGCCCAGGCCTACAGCTaGGCGAGGGAGACTCTCGCAGGCTGTCATGGGTGG | + |
Preference number: 6 (lower is better) Translates to: HLFFSKGAQAYS*ARETLAGCHGW Trigger: CCACCCATGACAGCCTGCGAGAGTCTCCCTCGCCCAGCTGTAGGCCTGGGCCCCTTTGGAGAAGAAGAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | CTGCCGGGAGACCCGCTTCTTCCTTGGGGGTGGTACTaGGGGTTGTTTGGCCTTCCCAGGAGGCACTGGTAT | + |
Preference number: 6 (lower is better) Translates to: LPGDPLLPWGWY*GLFGLPRRHWY Trigger: ATACCAGTGCCTCCTGGGAAGGCCAAACAACCCCCAGTACCACCCCCAAGGAAGAAGCGGGTCTCCCGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | CATGGCTGGCTTTGGCCTCTGTGTCCTGGCTTTGCTCCGTGGTCCTaGGAGGCCTGTCCCCAAGGCTACTTACGGTGCTCTGGGGAGGAA | + |
Preference number: 6 (lower is better) Translates to: HGWLWPLCPGFAPWS*EACPQGYLRCSGEE Trigger: TTCCTCCCCAGAGCACCGTAAGTAGCCTTGGGGACAGGCCTCCAAGGACCACGGAGCAAAGCCAGGACACAGAGGCCAAAGCCAGCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS GCA 72 bp | GGGGACAGCTGCTGGACTGAACTTGGAGGTGCTGCATaGCAGCTTGCCGGACAGGACTCAAGCCTTCCCAAG | + |
Preference number: 6 (lower is better) Translates to: GDSCWTELGGAA*QLAGQDSSLPK Trigger: CTTGGGAAGGCTTGAGTCCTGTCCGGCAAGCTGGCATGCAGCACCTCCAAGTTCAGTCCAGCAGCTGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | CCTTCCCAGGAGGCACTGGTATGCTGTCAGCATGGCTaGCTTTGGCCTCTGTGTCCTGGCTTTGCTCCGTGG | + |
Preference number: 6 (lower is better) Translates to: PSQEALVCCQHG*LWPLCPGFAPW Trigger: CCACGGAGCAAAGCCAGGACACAGAGGCCAAAGCCAGCCATGCTGACAGCATACCAGTGCCTCCTGGGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | ACCTCAAACTTCTCAGCGCACTGTGCACACAGTGCCTaGGCTGCTGTGTCTGCCCGTGACGCCAGTGTCCGT | + |
Preference number: 6 (lower is better) Translates to: TSNFSAHCAHSA*AAVSARDASVR Trigger: ACGGACACTGGCGTCACGGGCAGACACAGCAGCCCAGGCACTGTGTGCACAGTGCGCTGAGAAGTTTGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 72 bp | AGGGCGGGGTCCATGAGCTCCATCATGTACTCCACGTaGAGGAGCATCTCAGTGAGGTTGCTGCGGGCCAGC | + |
Preference number: 6 (lower is better) Translates to: RAGSMSSIMYST*RSISVRLLRAS Trigger: GCTGGCCCGCAGCAACCTCACTGAGATGCTCCTCAACGTGGAGTACATGATGGAGCTCATGGACCCCGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | TTGGGGACAGCTGCTGGACTGAACTTGGAGGTGCTGCATGCCAGCTaGCCGGACAGGACTCAAGCCTTCCCAAGATGCACCAGTCGCCTG | + |
Preference number: 6 (lower is better) Translates to: LGTAAGLNLEVLHAS*PDRTQAFPRCTSRL Trigger: CAGGCGACTGGTGCATCTTGGGAAGGCTTGAGTCCTGTCCGGCAAGCTGGCATGCAGCACCTCCAAGTTCAGTCCAGCAGCTGTCCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS GCA 72 bp | GCCAGCTTGCCGGACAGGACTCAAGCCTTCCCAAGATaGACCAGTCGCCTGTTTCTCAGAGGATGCCTCCTG | + |
Preference number: 6 (lower is better) Translates to: ASLPDRTQAFPR*TSRLFLRGCLL Trigger: CAGGAGGCATCCTCTGAGAAACAGGCGACTGGTGCATCTTGGGAAGGCTTGAGTCCTGTCCGGCAAGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | TTTGGCCTCTGTGTCCTGGCTTTGCTCCGTGGTCCTTaGAGGCCTGTCCCCAAGGCTACTTACGGTGCTCTG | + |
Preference number: 6 (lower is better) Translates to: FGLCVLALLRGP*RPVPKATYGAL Trigger: CAGAGCACCGTAAGTAGCCTTGGGGACAGGCCTCCAAGGACCACGGAGCAAAGCCAGGACACAGAGGCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | CCCGCTTCTTCCTTGGGGGTGGTACTGGGGGTTGTTTaGCCTTCCCAGGAGGCACTGGTATGCTGTCAGCAT | + |
Preference number: 6 (lower is better) Translates to: PASSLGVVLGVV*PSQEALVCCQH Trigger: ATGCTGACAGCATACCAGTGCCTCCTGGGAAGGCCAAACAACCCCCAGTACCACCCCCAAGGAAGAAGCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | TTCTCCTTGAGCTGCTGCAGTGAGCCATCCCGGCTGTaGATCTCCAGCAGGCTGGAGTTGATGGCCTCCTTC | + |
Preference number: 6 (lower is better) Translates to: FSLSCCSEPSRL*ISSRLELMASF Trigger: GAAGGAGGCCATCAACTCCAGCCTGCTGGAGATCCACAGCCGGGATGGCTCACTGCAGCAGCTCAAGGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 72 bp | CTTTGGCCTCTGTGTCCTGGCTTTGCTCCGTGGTCCTaGGAGGCCTGTCCCCAAGGCTACTTACGGTGCTCT | + |
Preference number: 6 (lower is better) Translates to: LWPLCPGFAPWS*EACPQGYLRCS Trigger: AGAGCACCGTAAGTAGCCTTGGGGACAGGCCTCCAAGGACCACGGAGCAAAGCCAGGACACAGAGGCCAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 72 bp | ACCCGCTTCTTCCTTGGGGGTGGTACTGGGGGTTGTTaGGCCTTCCCAGGAGGCACTGGTATGCTGTCAGCA | + |
Preference number: 6 (lower is better) Translates to: TRFFLGGGTGGC*AFPGGTGMLSA Trigger: TGCTGACAGCATACCAGTGCCTCCTGGGAAGGCCAAACAACCCCCAGTACCACCCCCAAGGAAGAAGCGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 72 bp | GCTGCTGGACTGAACTTGGAGGTGCTGCATGCCAGCTaGCCGGACAGGACTCAAGCCTTCCCAAGATGCACC | + |
Preference number: 6 (lower is better) Translates to: AAGLNLEVLHAS*PDRTQAFPRCT Trigger: GGTGCATCTTGGGAAGGCTTGAGTCCTGTCCGGCAAGCTGGCATGCAGCACCTCCAAGTTCAGTCCAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 72 bp | CTCTGGAGAGCTTTGGGGACAGCTGCTGGACTGAACTaGGAGGTGCTGCATGCCAGCTTGCCGGACAGGACT | + |
Preference number: 6 (lower is better) Translates to: LWRALGTAAGLN*EVLHASLPDRT Trigger: AGTCCTGTCCGGCAAGCTGGCATGCAGCACCTCCAAGTTCAGTCCAGCAGCTGTCCCCAAAGCTCTCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 72 bp | GAGCCATCCCGGCTGTGGATCTCCAGCAGGCTGGAGTaGATGGCCTCCTTCAGGGGCTTCAAGACACACTTG | + |
Preference number: 6 (lower is better) Translates to: EPSRLWISSRLE*MASFRGFKTHL Trigger: CAAGTGTGTCTTGAAGCCCCTGAAGGAGGCCATCAACTCCAGCCTGCTGGAGATCCACAGCCGGGATGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 72 bp | GGAAGTTGGGTTCCCGCACTACTATACAGGGCTGGCTaGAAGCATCCTTGCCGCTGTCCTGGGGCCGGTACA | + |
Preference number: 6 (lower is better) Translates to: GSWVPALLYRAG*KHPCRCPGAGT Trigger: TGTACCGGCCCCAGGACAGCGGCAAGGATGCTTCAAGCCAGCCCTGTATAGTAGTGCGGGAACCCAACTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | CCTAACTGCAGGGCGGGGTCCATGAGCTCCATCATGTACTCCACGTaGAGGAGCATCTCAGTGAGGTTGCTGCGGGCCAGCACGTACATG | + |
Preference number: 6 (lower is better) Translates to: PNCRAGSMSSIMYST*RSISVRLLRASTYM Trigger: CATGTACGTGCTGGCCCGCAGCAACCTCACTGAGATGCTCCTCAACGTGGAGTACATGATGGAGCTCATGGACCCCGCCCTGCAGTTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | ACCCTTGAACTCTGGAGAGCTTTGGGGACAGCTGCTGGACTGAACTaGGAGGTGCTGCATGCCAGCTTGCCGGACAGGACTCAAGCCTTC | + |
Preference number: 6 (lower is better) Translates to: TLELWRALGTAAGLN*EVLHASLPDRTQAF Trigger: GAAGGCTTGAGTCCTGTCCGGCAAGCTGGCATGCAGCACCTCCAAGTTCAGTCCAGCAGCTGTCCCCAAAGCTCTCCAGAGTTCAAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 72 bp | GAAGCTGAGGCGGTGGCGGGCCTTGTCCAGGATCATTaGGGGTTTCTTCTTCACGTTGGGGCTGCTGAACTC | + |
Preference number: 6 (lower is better) Translates to: EAEAVAGLVQDH*GFLLHVGAAEL Trigger: GAGTTCAGCAGCCCCAACGTGAAGAAGAAACCCTCAATGATCCTGGACAAGGCCCGCCACCGCCTCAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 72 bp | TGTGCATGCTGGTCAGCTTCTGCAGGATCTTCTCCATaGCAGCCACCTCAGGCACGCTGGTGGTCACACCCA | + |
Preference number: 6 (lower is better) Translates to: CACWSASAGSSP*QPPQARWWSHP Trigger: TGGGTGTGACCACCAGCGTGCCTGAGGTGGCTGTCATGGAGAAGATCCTGCAGAAGCTGACCAGCATGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 72 bp | GTCCACCAGCACGAAGAGCCGGTAGTCTTGGGGCTGTaGCACCTCAAACTTCTCAGCGCACTGTGCACACAG | + |
Preference number: 6 (lower is better) Translates to: VHQHEEPVVLGL*HLKLLSALCTQ Trigger: CTGTGTGCACAGTGCGCTGAGAAGTTTGAGGTGTCACAGCCCCAAGACTACCGGCTCTTCGTGCTGGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS GCA 72 bp | GGGTCATCATGGTACGGATCTCCTGCAGCATCTCAGTaGTGGATGTCTGGCGGGCCATCATCTCCAGGCTGT | + |
Preference number: 6 (lower is better) Translates to: GSSWYGSPAASQ*WMSGGPSSPGC Trigger: ACAGCCTGGAGATGATGGCCCGCCAGACATCCAGCACTGAGATGCTGCAGGAGATCCGTACCATGATGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS GCA 72 bp | GCTGACTCCACTATGGCCTCGAGTTCCTCCTCCGAGTaGAGGGTGGGTTCCACCAAGGCTTTGAGTTCAGTG | + |
Preference number: 6 (lower is better) Translates to: ADSTMASSSSSE*RVGSTKALSSV Trigger: CACTGAACTCAAAGCCTTGGTGGAACCCACCCTGCACTCGGAGGAGGAACTCGAGGCCATAGTGGAGTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | GGCTTTCCAGAGATACCCTCTCAGAAATGCGCCTCCTaGGAGGGGCTGCTGGAAGAGCCTTCTTCAGGGGTA | + |
Preference number: 6 (lower is better) Translates to: GFPEIPSQKCAS*EGLLEEPSSGV Trigger: TACCCCTGAAGAAGGCTCTTCCAGCAGCCCCTCCCAGGAGGCGCATTTCTGAGAGGGTATCTCTGGAAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | TATAGGAAGTTGGGTTCCCGCACTACTATACAGGGCTaGCTTGAAGCATCCTTGCCGCTGTCCTGGGGCCGG | + |
Preference number: 6 (lower is better) Translates to: YRKLGSRTTIQG*LEASLPLSWGR Trigger: CCGGCCCCAGGACAGCGGCAAGGATGCTTCAAGCCAGCCCTGTATAGTAGTGCGGGAACCCAACTTCCTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 72 bp | CTGGCGAAGCTGACGAAGCTGAGGCGGTGGCGGGCCTaGTCCAGGATCATTGAGGGTTTCTTCTTCACGTTG | + |
Preference number: 6 (lower is better) Translates to: LAKLTKLRRWRA*SRIIEGFFFTL Trigger: CAACGTGAAGAAGAAACCCTCAATGATCCTGGACAAGGCCCGCCACCGCCTCAGCTTCGTCAGCTTCGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | GGAGGCCTGTCCCCAAGGCTACTTACGGTGCTCTGGGGAGGAAGGTaGAGTGATGCTGTCCTAGAAATGCCTGAGTGGTCCCTGTCTGTT | + |
Preference number: 6 (lower is better) Translates to: GGLSPRLLTVLWGGR*SDAVLEMPEWSLSV Trigger: AACAGACAGGGACCACTCAGGCATTTCTAGGACAGCATCACTCAACCTTCCTCCCCAGAGCACCGTAAGTAGCCTTGGGGACAGGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | AGCAGGCTGGAGTTGATGGCCTCCTTCAGGGGCTTCAAGACACACTaGTACAAGGCTGACTCCACTATGGCCTCGAGTTCCTCCTCCGAG | + |
Preference number: 6 (lower is better) Translates to: SRLELMASFRGFKTH*YKADSTMASSSSSE Trigger: CTCGGAGGAGGAACTCGAGGCCATAGTGGAGTCAGCCTTGTACAAGTGTGTCTTGAAGCCCCTGAAGGAGGCCATCAACTCCAGCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | ATGAGCTCCATCATGTACTCCACGTTGAGGAGCATCTCAGTGAGGTaGCTGCGGGCCAGCACGTACATGAGCACAGGCAGGAAGTCGTCG | + |
Preference number: 6 (lower is better) Translates to: MSSIMYSTLRSISVR*LRASTYMSTGRKSS Trigger: CGACGACTTCCTGCCTGTGCTCATGTACGTGCTGGCCCGCAGCAACCTCACTGAGATGCTCCTCAACGTGGAGTACATGATGGAGCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | AAGTTGGGTTCCCGCACTACTATACAGGGCTGGCTTGAAGCATCCTaGCCGCTGTCCTGGGGCCGGTACACGAAGTGGAAGTCTCGTTTG | + |
Preference number: 6 (lower is better) Translates to: KLGSRTTIQGWLEAS*PLSWGRYTKWKSRL Trigger: CAAACGAGACTTCCACTTCGTGTACCGGCCCCAGGACAGCGGCAAGGATGCTTCAAGCCAGCCCTGTATAGTAGTGCGGGAACCCAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 72 bp | TTGAACTCTGGAGAGCTTTGGGGACAGCTGCTGGACTaGACTTGGAGGTGCTGCATGCCAGCTTGCCGGACA | + |
Preference number: 6 (lower is better) Translates to: LNSGELWGQLLD*TWRCCMPACRT Trigger: TGTCCGGCAAGCTGGCATGCAGCACCTCCAAGTTCAGTCCAGCAGCTGTCCCCAAAGCTCTCCAGAGTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS GCA 72 bp | TGTCCTGTGCCAGCTCCACCACCTTCTTATACAGTTTaGGGTCGCTGGAGAGGAAGGCATGGAAGACGCTGG | + |
Preference number: 6 (lower is better) Translates to: CPVPAPPPSYTV*GRWRGRHGRRW Trigger: CCAGCGTCTTCCATGCCTTCCTCTCCAGCGACCGCAAACTGTATAAGAAGGTGGTGGAGCTGGCACAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS GCA 72 bp | CTGCACCAGGCTGCCGAAGTAGGAGCTCTTGTCCTGTaGCAGCTCCACCACCTTCTTATACAGTTTGCGGTC | + |
Preference number: 6 (lower is better) Translates to: LHQAAEVGALVL*QLHHLLIQFAV Trigger: GACCGCAAACTGTATAAGAAGGTGGTGGAGCTGGCACAGGACAAGAGCTCCTACTTCGGCAGCCTGGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | TTCTTATACAGTTTGCGGTCGCTGGAGAGGAAGGCATaGAAGACGCTGGCGAAGCTGACGAAGCTGAGGCGG | + |
Preference number: 6 (lower is better) Translates to: FLYSLRSLERKA*KTLAKLTKLRR Trigger: CCGCCTCAGCTTCGTCAGCTTCGCCAGCGTCTTCCATGCCTTCCTCTCCAGCGACCGCAAACTGTATAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 72 bp | ATCATGTACTCCACGTTGAGGAGCATCTCAGTGAGGTaGCTGCGGGCCAGCACGTACATGAGCACAGGCAGG | + |
Preference number: 6 (lower is better) Translates to: IMYSTLRSISVR*LRASTYMSTGR Trigger: CCTGCCTGTGCTCATGTACGTGCTGGCCCGCAGCAACCTCACTGAGATGCTCCTCAACGTGGAGTACATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | CTTGGAGGCCTGTCCCCAAGGCTACTTACGGTGCTCTaGGGAGGAAGGTTGAGTGATGCTGTCCTAGAAATG | + |
Preference number: 6 (lower is better) Translates to: LGGLSPRLLTVL*GGRLSDAVLEM Trigger: CATTTCTAGGACAGCATCACTCAACCTTCCTCCCCAGAGCACCGTAAGTAGCCTTGGGGACAGGCCTCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | TCATCATGGTACGGATCTCCTGCAGCATCTCAGTGCTaGATGTCTGGCGGGCCATCATCTCCAGGCTGTACA | + |
Preference number: 6 (lower is better) Translates to: SSWYGSPAASQC*MSGGPSSPGCT Trigger: TGTACAGCCTGGAGATGATGGCCCGCCAGACATCCAGCACTGAGATGCTGCAGGAGATCCGTACCATGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | GCTTCAAGACACACTTGTACAAGGCTGACTCCACTATaGCCTCGAGTTCCTCCTCCGAGTGCAGGGTGGGTT | + |
Preference number: 6 (lower is better) Translates to: ASRHTCTRLTPL*PRVPPPSAGWV Trigger: AACCCACCCTGCACTCGGAGGAGGAACTCGAGGCCATAGTGGAGTCAGCCTTGTACAAGTGTGTCTTGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 72 bp | TCCCCAAGGCTACTTACGGTGCTCTGGGGAGGAAGGTaGAGTGATGCTGTCCTAGAAATGCCTGAGTGGTCC | + |
Preference number: 6 (lower is better) Translates to: SPRLLTVLWGGR*SDAVLEMPEWS Trigger: GGACCACTCAGGCATTTCTAGGACAGCATCACTCAACCTTCCTCCCCAGAGCACCGTAAGTAGCCTTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 72 bp | TTGTCCTGTGCCAGCTCCACCACCTTCTTATACAGTTaGCGGTCGCTGGAGAGGAAGGCATGGAAGACGCTG | + |
Preference number: 6 (lower is better) Translates to: LSCASSTTFLYS*RSLERKAWKTL Trigger: CAGCGTCTTCCATGCCTTCCTCTCCAGCGACCGCAAACTGTATAAGAAGGTGGTGGAGCTGGCACAGGACAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS TCA 72 bp | CTTTTCTTCTTTGATGGGGTACTCCAGCACCTCAGCTaGGCTGCCCTTCAGGGAAGGGAAGTGGACACACAG | + |
Preference number: 6 (lower is better) Translates to: LFFFDGVLQHLS*AALQGREVDTQ Trigger: CTGTGTGTCCACTTCCCTTCCCTGAAGGGCAGCTCAGCTGAGGTGCTGGAGTACCCCATCAAAGAAGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056950.14 ENSMUST00000101114.11 ENSMUST00000133820.2 ENSMUST00000150795.8 |
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CDS GCA 72 bp | ATTTCCCACGGAGAGCTCGATTTCACAGGAACAATTTaGGTAATGGGTTGTAGGCCGGAGGCTGGAGGATGC | + |
Preference number: 6 (lower is better) Translates to: ISHGELDFTGTI*VMGCRPEAGGC Trigger: GCATCCTCCAGCCTCCGGCCTACAACCCATTACGCAAATTGTTCCTGTGAAATCGAGCTCTCCGTGGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 72 bp | TTCAGCAAGTGTTCCCAGGCTGTTTCCAGGCCCAGGTaGGAGATGGTCTCAAGTTCAAGGAAGCTGCTAGCT | + |
Preference number: 6 (lower is better) Translates to: FSKCSQAVSRPR*EMVSSSRKLLA Trigger: AGCTAGCAGCTTCCTTGAACTTGAGACCATCTCCAACCTGGGCCTGGAAACAGCCTGGGAACACTTGCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101114.11 |
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CDS TCA 72 bp | GCAGGTCTTCAGCAAGATGGAGATTTTCTTCCCTGGTaGGTAGGCTTTGTGCATGCTGGTCAGCTTCTGCAG | + |
Preference number: 6 (lower is better) Translates to: AGLQQDGDFLPW*VGFVHAGQLLQ Trigger: CTGCAGAAGCTGACCAGCATGCACAAAGCCTACTCACCAGGGAAGAAAATCTCCATCTTGCTGAAGACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CCA 72 bp | GGAAGGTTGAGTGATGCTGTCCTAGAAATGCCTGAGTaGTCCCTGTCTGTTGAAGTCCCCACATTCTGGCTT | + |
Preference number: 6 (lower is better) Translates to: GRLSDAVLEMPE*SLSVEVPTFWL Trigger: AAGCCAGAATGTGGGGACTTCAACAGACAGGGACCACTCAGGCATTTCTAGGACAGCATCACTCAACCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |
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CDS CAA 90 bp | AACACAAGAACTGAGCCTTCCAGGTACAGTATAGCCTTTTCTTCTTaGATGGGGTACTCCAGCACCTCAGCTGAGCTGCCCTTCAGGGAA | + |
Preference number: 6 (lower is better) Translates to: NTRTEPSRYSIAFSS*MGYSSTSAELPFRE Trigger: TTCCCTGAAGGGCAGCTCAGCTGAGGTGCTGGAGTACCCCATCAAAGAAGAAAAGGCTATACTGTACCTGGAAGGCTCAGTTCTTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056950.14 ENSMUST00000101114.11 ENSMUST00000133820.2 |
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CDS TCA 72 bp | GCTTCCCTGGGTTGCCAAGAGCCATGGAGTCATAGATaGGCTTGCAGGTCTTCAGCAAGATGGAGATTTTCT | + |
Preference number: 6 (lower is better) Translates to: ASLGCQEPWSHR*ACRSSARWRFS Trigger: AGAAAATCTCCATCTTGCTGAAGACCTGCAAGCTCATCTATGACTCCATGGCTCTTGGCAACCCAGGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056950.14 ENSMUST00000133820.2 |