Pregenerated sensors for RIN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024883Ensembl transcript IDs: ENSMUST00000025818.8, ENSMUST00000224032.2, ENSMUST00000224288.2, ENSMUST00000225427.2, ENSMUST00000225799.3, ENSMUST00000237762.2
Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GAGGGGCCACTAGCTTCTGGCAGCCGCACACACAGAGCCTGGCACTaGCGAGTGTTAGATTTCCGCACCAGGAAGGTCCCCGGAGGCTCT | + |
Preference number: 1 (lower is better) Translates to: EGPLASGSRTHRAWH*RVLDFRTRKVPGGS Trigger: AGAGCCTCCGGGGACCTTCCTGGTGCGGAAATCTAACACTCGCCAGTGCCAGGCTCTGTGTGTGCGGCTGCCAGAAGCTAGTGGCCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237762.2 |
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3UTR CCA 90 bp | GTGGCAGACACCACAGAGAACTGTGGGTGGGTGGTAAAGGAAGCTTaGCAGCTGGGAAGAGTGGACTTAGAGGCTCCCGGGGGCCCAGGT | + |
Preference number: 1 (lower is better) Translates to: VADTTENCGWVVKEA*QLGRVDLEAPGGPG Trigger: ACCTGGGCCCCCGGGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCACAGTTCTCTGTGGTGTCTGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 90 bp | CGAGCCTTCAGCCGGGGTATGGGTGGGGCTTCCGAAGGCCTCTGTTaGTCCTTGGTGTTGAGTGAGGAGCTCCAGAACTCCATGCCCAGA | + |
Preference number: 1 (lower is better) Translates to: RAFSRGMGGASEGLC*SLVLSEELQNSMPR Trigger: TCTGGGCATGGAGTTCTGGAGCTCCTCACTCAACACCAAGGACCAACAGAGGCCTTCGGAAGCCCCACCCATACCCCGGCTGAAGGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224288.2 |
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3UTR TCA 90 bp | GGGGTATGGGTGGGGCTTCCGAAGGCCTCTGTTGGTCCTTGGTGTTaGGTGAGGAGCTCCAGAACTCCATGCCCAGATGGGAGATGGCCT | + |
Preference number: 1 (lower is better) Translates to: GVWVGLPKASVGPWC*VRSSRTPCPDGRWP Trigger: AGGCCATCTCCCATCTGGGCATGGAGTTCTGGAGCTCCTCACTCAACACCAAGGACCAACAGAGGCCTTCGGAAGCCCCACCCATACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224288.2 |
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3UTR CCA 90 bp | GGAGTTGCACAGGGTCTTGATGCTCCAGCATCTCTCCATGGGCAGTaGGAGAGGCAAAAGAAGCCAGGACTACCCTCCCACCACGCCCCT | + |
Preference number: 1 (lower is better) Translates to: GVAQGLDAPASLHGQ*ERQKKPGLPSHHAP Trigger: AGGGGCGTGGTGGGAGGGTAGTCCTGGCTTCTTTTGCCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAGACCCTGTGCAACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR GCA 90 bp | CTCCATGCCCAGATGGGAGATGGCCTCCAGCTCTTTGTGGGTGGCTaGCTGATGAATGGCTCTGGGGAGTCGGAGAGGGAGGAGAAGAAT | + |
Preference number: 1 (lower is better) Translates to: LHAQMGDGLQLFVGG*LMNGSGESEREEKN Trigger: ATTCTTCTCCTCCCTCTCCGACTCCCCAGAGCCATTCATCAGGCAGCCACCCACAAAGAGCTGGAGGCCATCTCCCATCTGGGCATGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224288.2 |
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3UTR CCA 90 bp | AGATGGCCTCCAGCTCTTTGTGGGTGGCTGCCTGATGAATGGCTCTaGGGAGTCGGAGAGGGAGGAGAAGAATGTCCCTGGTACGGCAGT | + |
Preference number: 1 (lower is better) Translates to: RWPPALCGWLPDEWL*GVGEGGEECPWYGS Trigger: ACTGCCGTACCAGGGACATTCTTCTCCTCCCTCTCCGACTCCCCAGAGCCATTCATCAGGCAGCCACCCACAAAGAGCTGGAGGCCATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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3UTR TCA 90 bp | TTCTCTGCTCAGATTTGCAGTGGGCTTCCCTCTGGGGCTGCTGCCTaGGCCTGGAGGGCTAGTCTGCTGGAACGTCTTGGGAATTACCTA | + |
Preference number: 1 (lower is better) Translates to: FSAQICSGLPSGAAA*AWRASLLERLGNYL Trigger: TAGGTAATTCCCAAGACGTTCCAGCAGACTAGCCCTCCAGGCTCAGGCAGCAGCCCCAGAGGGAAGCCCACTGCAAATCTGAGCAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR GCA 90 bp | GGGAGGAGAAGAATGTCCCTGGTACGGCAGTATCCACAGATGAGCTaGACCAGGTCCTGGAACATGAGCTCTGAGCCCTCCAAAGAGACA | + |
Preference number: 1 (lower is better) Translates to: GRRRMSLVRQYPQMS*TRSWNMSSEPSKET Trigger: TGTCTCTTTGGAGGGCTCAGAGCTCATGTTCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAGGGACATTCTTCTCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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3UTR CCA 90 bp | AGTCTACCTCCTGTTGGTATGTGCATCACATCTAAGTTGGTGCCCTaGTACTCAGAGGCCCAGGAGAGCAGCTCTGAGCCTGGCTGTGGT | + |
Preference number: 1 (lower is better) Translates to: SLPPVGMCITSKLVP*YSEAQESSSEPGCG Trigger: ACCACAGCCAGGCTCAGAGCTGCTCTCCTGGGCCTCTGAGTACCAGGGCACCAACTTAGATGTGATGCACATACCAACAGGAGGTAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR TCA 90 bp | TCCCTGACCCCTAGAACTAGGAGAGACTGGAGTTGCACAGGGTCTTaGTGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGCAAAAGAA | + |
Preference number: 1 (lower is better) Translates to: SLTPRTRRDWSCTGS*CSSISPWAVGEAKE Trigger: TTCTTTTGCCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAGACCCTGTGCAACTCCAGTCTCTCCTAGTTCTAGGGGTCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 90 bp | CTCTTCGATATAGTGGCTGGAGACAAAAGAGGGGCCACTAGCTTCTaGCAGCCGCACACACAGAGCCTGGCACTGGCGAGTGTTAGATTT | + |
Preference number: 1 (lower is better) Translates to: LFDIVAGDKRGATSF*QPHTQSLALASVRF Trigger: AAATCTAACACTCGCCAGTGCCAGGCTCTGTGTGTGCGGCTGCCAGAAGCTAGTGGCCCCTCTTTTGTCTCCAGCCACTATATCGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237762.2 |
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3UTR TCA 90 bp | GCAGTATCCACAGATGAGCTGCACCAGGTCCTGGAACATGAGCTCTaGGCCCTCCAAAGAGACACCGCCAGTACTCTCTTCGATATAGTG | + |
Preference number: 1 (lower is better) Translates to: AVSTDELHQVLEHEL*ALQRDTASTLFDIV Trigger: CACTATATCGAAGAGAGTACTGGCGGTGTCTCTTTGGAGGGCTCAGAGCTCATGTTCCAGGACCTGGTGCAGCTCATCTGTGGATACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237762.2 |
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3UTR GCA 90 bp | TTGAAAGTCTACCTCCTGTTGGTATGTGCATCACATCTAAGTTGGTaGCCTGGTACTCAGAGGCCCAGGAGAGCAGCTCTGAGCCTGGCT | + |
Preference number: 1 (lower is better) Translates to: LKVYLLLVCASHLSW*PGTQRPRRAALSLA Trigger: AGCCAGGCTCAGAGCTGCTCTCCTGGGCCTCTGAGTACCAGGGCACCAACTTAGATGTGATGCACATACCAACAGGAGGTAGACTTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 90 bp | AGCTTTAGTAAGGACCCAAGGAGTGGGGTACGACGGCAATGTTTGTaGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCTGCTAGCGTGC | + |
Preference number: 1 (lower is better) Translates to: SFSKDPRSGVRRQCL*STSLFWKLLFLLAC Trigger: GCACGCTAGCAGGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCCCACTCCTTGGGTCCTTACTAAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 90 bp | GATTTGAAAGTCTACCTCCTGTTGGTATGTGCATCACATCTAAGTTaGTGCCCTGGTACTCAGAGGCCCAGGAGAGCAGCTCTGAGCCTG | + |
Preference number: 1 (lower is better) Translates to: DLKVYLLLVCASHLS*CPGTQRPRRAALSL Trigger: CAGGCTCAGAGCTGCTCTCCTGGGCCTCTGAGTACCAGGGCACCAACTTAGATGTGATGCACATACCAACAGGAGGTAGACTTTCAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR TCA 90 bp | ATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACTG | + |
Preference number: 1 (lower is better) Translates to: ISLQMVVSHHVVAGI*TLDLRKSSWVLLPL Trigger: CAGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 90 bp | GAGTCAGATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTT | + |
Preference number: 1 (lower is better) Translates to: ESDLVTDGCEPPCGC*DLNSGPSEEQLGAL Trigger: AAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATCTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 90 bp | AGGAGTGGGGTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTaGAAACTTCTCTTCCTGCTAGCGTGCATTATTTCTCAGGGTCCA | + |
Preference number: 1 (lower is better) Translates to: RSGVRRQCLWSTSLF*KLLFLLACIISQGP Trigger: TGGACCCTGAGAAATAATGCACGCTAGCAGGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCCCACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR TCA 90 bp | TTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACTaGGCCATCTCACCAGCCCCTCAACAGATTTCTGATCGTGAGAAA | + |
Preference number: 1 (lower is better) Translates to: FELWTFGRAVGCSYH*AISPAPQQISDREK Trigger: TTTCTCACGATCAGAAATCTGTTGAGGGGCTGGTGAGATGGCTCAGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR GCA 90 bp | GCCCCTCAACAGATTTCTGATCGTGAGAAAAGACTGGAACATAGATaGTTTCTCTCCTACGGCCTGACCTCCAGGGTGACAACCATCTCT | + |
Preference number: 1 (lower is better) Translates to: APQQISDREKRLEHR*FLSYGLTSRVTTIS Trigger: AGAGATGGTTGTCACCCTGGAGGTCAGGCCGTAGGAGAGAAAGCATCTATGTTCCAGTCTTTTCTCACGATCAGAAATCTGTTGAGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR GCA 90 bp | AACAATCCTCTTCTAAGAATCTCTGACTATAAGGGGTCTCTGCTCTaGATGTCCCAAGCTGCTATAAGAGTGTGTGAGGCCAGTGACTGT | + |
Preference number: 1 (lower is better) Translates to: NNPLLRISDYKGSLL*MSQAAIRVCEASDC Trigger: ACAGTCACTGGCCTCACACACTCTTATAGCAGCTTGGGACATGCAGAGCAGAGACCCCTTATAGTCAGAGATTCTTAGAAGAGGATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR GCA 90 bp | TTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCTGCTAGCGTaGATTATTTCTCAGGGTCCAATTTCCCAGAAATACTTCAGTGTC | + |
Preference number: 1 (lower is better) Translates to: LWSTSLFWKLLFLLA*IISQGPISQKYFSV Trigger: GACACTGAAGTATTTCTGGGAAATTGGACCCTGAGAAATAATGCACGCTAGCAGGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CAA 90 bp | GGTGGCAGACACCACAGAGAACTGTGGGTGGGTGGTAAAGGAAGCTaGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCCGGGGGCCCAGG | + |
Preference number: 2 (lower is better) Translates to: GGRHHRELWVGGKGS*AAGKSGLRGSRGPR Trigger: CCTGGGCCCCCGGGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCACAGTTCTCTGTGGTGTCTGCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CAA 90 bp | CGGGGTATGGGTGGGGCTTCCGAAGGCCTCTGTTGGTCCTTGGTGTaGAGTGAGGAGCTCCAGAACTCCATGCCCAGATGGGAGATGGCC | + |
Preference number: 2 (lower is better) Translates to: RGMGGASEGLCWSLV*SEELQNSMPRWEMA Trigger: GGCCATCTCCCATCTGGGCATGGAGTTCTGGAGCTCCTCACTCAACACCAAGGACCAACAGAGGCCTTCGGAAGCCCCACCCATACCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224288.2 |
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3UTR CAA 90 bp | TTCAGCCGGGGTATGGGTGGGGCTTCCGAAGGCCTCTGTTGGTCCTaGGTGTTGAGTGAGGAGCTCCAGAACTCCATGCCCAGATGGGAG | + |
Preference number: 2 (lower is better) Translates to: FSRGMGGASEGLCWS*VLSEELQNSMPRWE Trigger: CTCCCATCTGGGCATGGAGTTCTGGAGCTCCTCACTCAACACCAAGGACCAACAGAGGCCTTCGGAAGCCCCACCCATACCCCGGCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224288.2 |
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3UTR-3UTR CCA 90 bp | GGAGTTGCACAGGGTCTTGATGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGATCGGCCAGAGGTGGTaGCAGACACCACAGAGAACT | + |
Preference number: 2 (lower is better) Translates to: GVAQGLDAPASLHGQWERIGQRW*QTPQRT Trigger: AGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGAT...CCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAGACCCTGTGCAACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR CCA 90 bp | GAAGGCCTCTGTTGGTCCTTGGTGTTGAGTGAGGAGCTCCAGAACTCCATGCCCTGGCTGCCTGATGAATaGCTCTGGGGAGTCGGAGAG | + |
Preference number: 2 (lower is better) Translates to: EGLCWSLVLSEELQNSMPWLPDE*LWGVGE Trigger: CTCTCCGACTCCCCAGAGCCATTCATCAGGCAGCCA...GGGCATGGAGTTCTGGAGCTCCTCACTCAACACCAAGGACCAACAGAGGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224288.2 |
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3UTR-3UTR TCA 90 bp | CTGGTACGGCAGTATCCACAGATGAGCTGCACCAGGTCCTGGAACATGAGCTCTGGCAGTATCCACAGATaGGCTGCACCAGGTCCTGGA | + |
Preference number: 2 (lower is better) Translates to: LVRQYPQMSCTRSWNMSSGSIHR*AAPGPG Trigger: TCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCC...AGAGCTCATGTTCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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3UTR-3UTR CCA 90 bp | GACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACTGAGCCATCTCACCAGCCCCCATCCATGTAGGTCCTaGGTCACTCTAGGAACCCTG | + |
Preference number: 2 (lower is better) Translates to: DLRKSSWVLLPLSHLTSPHPCRS*VTLGTL Trigger: CAGGGTTCCTAGAGTGACCCAGGACCTACATGGATG...GGGGCTGGTGAGATGGCTCAGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR TCA 90 bp | AAGAATGTCCCTGGTACGGCAGTATCCACAGATGAGCTGCACCAGGTCCTGGAAGGCAGTATCCACAGATaGGCTGCACCAGGTCCTGGA | + |
Preference number: 2 (lower is better) Translates to: KNVPGTAVSTDELHQVLEGSIHR*AAPGPG Trigger: TCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCC...TTCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAGGGACATTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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3UTR-3UTR CCA 90 bp | GGAGTTGCACAGGGTCTTGATGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGACAGAGAACTGTGGGTaGGTGGTAAAGGAAGCTTGG | + |
Preference number: 2 (lower is better) Translates to: GVAQGLDAPASLHGQWERTENCG*VVKEAW Trigger: CCAAGCTTCCTTTACCACCCACCCACAGTTCTCTGT...CCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAGACCCTGTGCAACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR CCA 90 bp | AGAATGTCCCTGGTACGGCAGTATCCACAGATGAGCTGCACCAGGTCCTGGAACCCAGCTCTTTGTGGGTaGCTGCCTGATGAATGGCTC | + |
Preference number: 2 (lower is better) Translates to: RMSLVRQYPQMSCTRSWNPALCG*LPDEWL Trigger: GAGCCATTCATCAGGCAGCCACCCACAAAGAGCTGG...GTTCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAGGGACATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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3UTR-3UTR CCA 90 bp | AGGCCCAGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACACCCTCTTGTGGCTTTTaGTGGGTATTTTTCTCTGCT | + |
Preference number: 2 (lower is better) Translates to: RPRRAALSLAVVLLCPETPSCGF*WVFFSA Trigger: AGCAGAGAAAAATACCCACCAAAAGCCACAAGAGGG...TGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCTGGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR CCA 90 bp | AAGAATGTCCCTGGTACGGCAGTATCCACAGATGAGCTGCACCAGGTCCTGGAACCAGCTCTTTGTGGGTaGCTGCCTGATGAATGGCTC | + |
Preference number: 2 (lower is better) Translates to: KNVPGTAVSTDELHQVLEPALCG*LPDEWL Trigger: GAGCCATTCATCAGGCAGCCACCCACAAAGAGCTGG...TTCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAGGGACATTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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3UTR CAA 90 bp | TCAGAGGCCCAGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTaGTCCGGAAACAATCCTCTTCTAAGAATCTCTGACTATAAGGGG | + |
Preference number: 2 (lower is better) Translates to: SEAQESSSEPGCGPP*SGNNPLLRISDYKG Trigger: CCCCTTATAGTCAGAGATTCTTAGAAGAGGATTGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCTGGGCCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR TCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTAGTTGCACAGGGTCTTaGTGCTCCAGCATCTCTCCA | + |
Preference number: 2 (lower is better) Translates to: SWELPNLYCRGAHSYTIPSCTGS*CSSISP Trigger: TGGAGAGATGCTGGAGCATCAAGACCCTGTGCAACT...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR GCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTTTTGGGGAGCTTTGCTaGCATTCTGGTTCCCTGACC | + |
Preference number: 2 (lower is better) Translates to: SWELPNLYCRGAHSYTIPFGELC*HSGSLT Trigger: GGTCAGGGAACCAGAATGGCAGCAAAGCTCCCCAAA...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR GCA 90 bp | AGGAGAAGAATGTCCCTGGTACGGCAGTATCCACAGATGAGCTGCACCAGGTCCTATCCACAGATGAGCTaGACCAGGTCCTGGAACATG | + |
Preference number: 2 (lower is better) Translates to: RRRMSLVRQYPQMSCTRSYPQMS*TRSWNM Trigger: CATGTTCCAGGACCTGGTGCAGCTCATCTGTGGATA...GGACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAGGGACATTCTTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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3UTR-3UTR CCA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCGTGGTAAAGGAAGCTTaGCAGCTGGGAAGAGTGGAC | + |
Preference number: 2 (lower is better) Translates to: TMWLLGFELWTFGRAVGCVVKEA*QLGRVD Trigger: GTCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCAC...GCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR CCA 90 bp | AGAGGCTGCCTACGGGACAGGCTTGCCATAGCTGCTAACACTCATTCTTTCTTCATCGGCCAGAGGTGGTaGCAGACACCACAGAGAACT | + |
Preference number: 2 (lower is better) Translates to: RGCLRDRLAIAANTHSFFIGQRW*QTPQRT Trigger: AGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGAT...GAAGAAAGAATGAGTGTTAGCAGCTATGGCAAGCCTGTCCCGTAGGCAGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR CCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTTCCAGCATCTCTCCATaGGCAGTGGGAGAGGCAAAA | + |
Preference number: 2 (lower is better) Translates to: SWELPNLYCRGAHSYTIPSSISP*AVGEAK Trigger: TTTTGCCTCTCCCACTGCCCATGGAGAGATGCTGGA...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR CCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTCATCCATGTAGGTCCTaGGTCACTCTAGGAACCCTG | + |
Preference number: 2 (lower is better) Translates to: SWELPNLYCRGAHSYTIPHPCRS*VTLGTL Trigger: CAGGGTTCCTAGAGTGACCCAGGACCTACATGGATG...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR CCA 90 bp | AGAATGTCCCTGGTACGGCAGTATCCACAGATGAGCTGCACCAGGTCCTGGAACCTTCGATATAGTGGCTaGAGACAAAAGAGGGGCCAC | + |
Preference number: 2 (lower is better) Translates to: RMSLVRQYPQMSCTRSWNLRYSG*RQKRGH Trigger: GTGGCCCCTCTTTTGTCTCCAGCCACTATATCGAAG...GTTCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAGGGACATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237762.2 |
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3UTR CAA 90 bp | GGATTTGAAAGTCTACCTCCTGTTGGTATGTGCATCACATCTAAGTaGGTGCCCTGGTACTCAGAGGCCCAGGAGAGCAGCTCTGAGCCT | + |
Preference number: 2 (lower is better) Translates to: GFESLPPVGMCITSK*VPWYSEAQESSSEP Trigger: AGGCTCAGAGCTGCTCTCCTGGGCCTCTGAGTACCAGGGCACCAACTTAGATGTGATGCACATACCAACAGGAGGTAGACTTTCAAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR GCA 90 bp | CTGCCGTGGGGCCCACAGCTACACCATTCCTCATTATCAAGCTTTAGTAAGGACTTTGGGGAGCTTTGCTaGCATTCTGGTTCCCTGACC | + |
Preference number: 2 (lower is better) Translates to: LPWGPQLHHSSLSSFSKDFGELC*HSGSLT Trigger: GGTCAGGGAACCAGAATGGCAGCAAAGCTCCCCAAA...GTCCTTACTAAAGCTTGATAATGAGGAATGGTGTAGCTGTGGGCCCCACGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR-3UTR CCA 90 bp | AGAGGCTGCCTACGGGACAGGCTTGCCATAGCTGCTAACACTCATTCTTTCTTCTCCAGCATCTCTCCATaGGCAGTGGGAGAGGCAAAA | + |
Preference number: 2 (lower is better) Translates to: RGCLRDRLAIAANTHSFFSSISP*AVGEAK Trigger: TTTTGCCTCTCCCACTGCCCATGGAGAGATGCTGGA...GAAGAAAGAATGAGTGTTAGCAGCTATGGCAAGCCTGTCCCGTAGGCAGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR CAA 90 bp | GATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACT | + |
Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NSGPSEEQLGALTT Trigger: AGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR CAA 90 bp | TCAAGCTTTAGTAAGGACCCAAGGAGTGGGGTACGACGGCAATGTTaGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCTGCTAGCG | + |
Preference number: 2 (lower is better) Translates to: SSFSKDPRSGVRRQC*WSTSLFWKLLFLLA Trigger: CGCTAGCAGGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCCCACTCCTTGGGTCCTTACTAAAGCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR-3UTR TCA 90 bp | GTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCTGAGTTGCACAGGGTCTTaGTGCTCCAGCATCTCTCCA | + |
Preference number: 2 (lower is better) Translates to: VRRQCLWSTSLFWKLLFLSCTGS*CSSISP Trigger: TGGAGAGATGCTGGAGCATCAAGACCCTGTGCAACT...CAGGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR-3UTR CCA 90 bp | GGGTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCACAGAGAACTGTGGGTaGGTGGTAAAGGAAGCTTGG | + |
Preference number: 2 (lower is better) Translates to: GYDGNVCGAPLCSGNFSSTENCG*VVKEAW Trigger: CCAAGCTTCCTTTACCACCCACCCACAGTTCTCTGT...GGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR-3UTR CCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTCTGGGATTTGAACTCTaGACCTTCGGAAGAGCAGTT | + |
Preference number: 2 (lower is better) Translates to: SWELPNLYCRGAHSYTIPLGFEL*TFGRAV Trigger: AACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAG...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR-3UTR GCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTGTCATATCCCTTCTTTaGACACCAGATGCTATGTCT | + |
Preference number: 2 (lower is better) Translates to: SWELPNLYCRGAHSYTIPVISLL*TPDAMS Trigger: AGACATAGCATCTGGTGTGCAAAGAAGGGATATGAC...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR-3UTR GCA 90 bp | CTGCCGTGGGGCCCACAGCTACACCATTCCTCATTATCAAGCTTTAGTAAGGACGTCATATCCCTTCTTTaGACACCAGATGCTATGTCT | + |
Preference number: 2 (lower is better) Translates to: LPWGPQLHHSSLSSFSKDVISLL*TPDAMS Trigger: AGACATAGCATCTGGTGTGCAAAGAAGGGATATGAC...GTCCTTACTAAAGCTTGATAATGAGGAATGGTGTAGCTGTGGGCCCCACGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR-3UTR CCA 90 bp | ATTTCTGATCGTGAGAAAAGACTGGAACATAGATGCTTTCTCTCCTACGGCCTGCTGTTCCCTAGCAGGTaGACTTATGAAGATCGGCCA | + |
Preference number: 2 (lower is better) Translates to: ISDREKRLEHRCFLSYGLLFPSR*TYEDRP Trigger: TGGCCGATCTTCATAAGTCCACCTGCTAGGGAACAG...CAGGCCGTAGGAGAGAAAGCATCTATGTTCCAGTCTTTTCTCACGATCAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR-3UTR CCA 90 bp | GGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCATCGTGAGAAAAGACTaGAACATAGATGCTTTCTCT | + |
Preference number: 2 (lower is better) Translates to: GCWDLNSGPSEEQLGALTIVRKD*NIDAFS Trigger: AGAGAAAGCATCTATGTTCCAGTCTTTTCTCACGAT...GGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR-3UTR CCA 90 bp | CTTCTAAGAATCTCTGACTATAAGGGGTCTCTGCTCTGCATGTCCCAAGCTGCTGTATGCGCCCTCTTGTaGCTTTTGGTGGGTATTTTT | + |
Preference number: 2 (lower is better) Translates to: LLRISDYKGSLLCMSQAAVCALL*LLVGIF Trigger: AAAAATACCCACCAAAAGCCACAAGAGGGCGCATAC...AGCAGCTTGGGACATGCAGAGCAGAGACCCCTTATAGTCAGAGATTCTTAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR CCA 72 bp | CTCTTGAGGGGAGCGAGCCTTCAGCCGGGGTATGGGTaGGGCTTCCGAAGGCCTCTGTTGGTCCTTGGTGTT | + |
Preference number: 3 (lower is better) Translates to: LLRGASLQPGYG*GFRRPLLVLGV Trigger: AACACCAAGGACCAACAGAGGCCTTCGGAAGCCCCACCCATACCCCGGCTGAAGGCTCGCTCCCCTCAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224288.2 |
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3UTR GCA 72 bp | CAGATGGGAGATGGCCTCCAGCTCTTTGTGGGTGGCTaGCTGATGAATGGCTCTGGGGAGTCGGAGAGGGAG | + |
Preference number: 3 (lower is better) Translates to: QMGDGLQLFVGG*LMNGSGESERE Trigger: CTCCCTCTCCGACTCCCCAGAGCCATTCATCAGGCAGCCACCCACAAAGAGCTGGAGGCCATCTCCCATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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3UTR CCA 72 bp | AGCCGGGGTATGGGTGGGGCTTCCGAAGGCCTCTGTTaGTCCTTGGTGTTGAGTGAGGAGCTCCAGAACTCC | + |
Preference number: 3 (lower is better) Translates to: SRGMGGASEGLC*SLVLSEELQNS Trigger: GGAGTTCTGGAGCTCCTCACTCAACACCAAGGACCAACAGAGGCCTTCGGAAGCCCCACCCATACCCCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224288.2 |
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3UTR CCA 72 bp | CTAGCTTCTGGCAGCCGCACACACAGAGCCTGGCACTaGCGAGTGTTAGATTTCCGCACCAGGAAGGTCCCC | + |
Preference number: 3 (lower is better) Translates to: LASGSRTHRAWH*RVLDFRTRKVP Trigger: GGGGACCTTCCTGGTGCGGAAATCTAACACTCGCCAGTGCCAGGCTCTGTGTGTGCGGCTGCCAGAAGCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237762.2 |
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3UTR CCA 72 bp | GGGCCACTAGCTTCTGGCAGCCGCACACACAGAGCCTaGCACTGGCGAGTGTTAGATTTCCGCACCAGGAAG | + |
Preference number: 3 (lower is better) Translates to: GPLASGSRTHRA*HWRVLDFRTRK Trigger: CTTCCTGGTGCGGAAATCTAACACTCGCCAGTGCCAGGCTCTGTGTGTGCGGCTGCCAGAAGCTAGTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237762.2 |
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3UTR TCA 72 bp | GTGGGGCTTCCGAAGGCCTCTGTTGGTCCTTGGTGTTaGGTGAGGAGCTCCAGAACTCCATGCCCAGATGGG | + |
Preference number: 3 (lower is better) Translates to: VGLPKASVGPWC*VRSSRTPCPDG Trigger: CCCATCTGGGCATGGAGTTCTGGAGCTCCTCACTCAACACCAAGGACCAACAGAGGCCTTCGGAAGCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224288.2 |
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3UTR CCA 72 bp | TCGGCCAGAGGTGGTGGCAGACACCACAGAGAACTGTaGGTGGGTGGTAAAGGAAGCTTGGCAGCTGGGAAG | + |
Preference number: 3 (lower is better) Translates to: SARGGGRHHREL*VGGKGSLAAGK Trigger: CTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 72 bp | ATAGTGGCTGGAGACAAAAGAGGGGCCACTAGCTTCTaGCAGCCGCACACACAGAGCCTGGCACTGGCGAGT | + |
Preference number: 3 (lower is better) Translates to: IVAGDKRGATSF*QPHTQSLALAS Trigger: ACTCGCCAGTGCCAGGCTCTGTGTGTGCGGCTGCCAGAAGCTAGTGGCCCCTCTTTTGTCTCCAGCCACTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237762.2 |
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3UTR-3UTR CAA 90 bp | AGGCCCAGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACATTTCTCTGCTCAGATTaGCAGTGGGCTTCCCTCTGG | + |
Preference number: 3 (lower is better) Translates to: RPRRAALSLAVVLLCPETFLCSD*QWASLW Trigger: CCAGAGGGAAGCCCACTGCAAATCTGAGCAGAGAAA...TGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCTGGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 72 bp | ACCACAGAGAACTGTGGGTGGGTGGTAAAGGAAGCTTaGCAGCTGGGAAGAGTGGACTTAGAGGCTCCCGGG | + |
Preference number: 3 (lower is better) Translates to: TTENCGWVVKEA*QLGRVDLEAPG Trigger: CCCGGGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCACAGTTCTCTGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 72 bp | CCAGAGGTGGTGGCAGACACCACAGAGAACTGTGGGTaGGTGGTAAAGGAAGCTTGGCAGCTGGGAAGAGTG | + |
Preference number: 3 (lower is better) Translates to: PEVVADTTENCG*VVKEAWQLGRV Trigger: CACTCTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCACAGTTCTCTGTGGTGTCTGCCACCACCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 72 bp | TCCCTAGCAGGTGGACTTATGAAGATCGGCCAGAGGTaGTGGCAGACACCACAGAGAACTGTGGGTGGGTGG | + |
Preference number: 3 (lower is better) Translates to: SLAGGLMKIGQR*WQTPQRTVGGW Trigger: CCACCCACCCACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGATCTTCATAAGTCCACCTGCTAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 72 bp | CAGGGTCTTGATGCTCCAGCATCTCTCCATGGGCAGTaGGAGAGGCAAAAGAAGCCAGGACTACCCTCCCAC | + |
Preference number: 3 (lower is better) Translates to: QGLDAPASLHGQ*ERQKKPGLPSH Trigger: GTGGGAGGGTAGTCCTGGCTTCTTTTGCCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAGACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR CAA 90 bp | ATCCCTGTGGGCTATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTGGTGGTAAAGGAAGCTaGGCAGCTGGGAAGAGTGGA | + |
Preference number: 3 (lower is better) Translates to: IPVGYGETEARGLKQRVCGGKGS*AAGKSG Trigger: TCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACC...ACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATAGCCCACAGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR TCA 72 bp | GGCTTCCGAAGGCCTCTGTTGGTCCTTGGTGTTGAGTaGGGAGCTCCAGAACTCCATGCCCAGATGGGAGAT | + |
Preference number: 3 (lower is better) Translates to: GFRRPLLVLGVE*GAPELHAQMGD Trigger: ATCTCCCATCTGGGCATGGAGTTCTGGAGCTCCTCACTCAACACCAAGGACCAACAGAGGCCTTCGGAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224288.2 |
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3UTR GCA 72 bp | AGAATGTCCCTGGTACGGCAGTATCCACAGATGAGCTaGACCAGGTCCTGGAACATGAGCTCTGAGCCCTCC | + |
Preference number: 3 (lower is better) Translates to: RMSLVRQYPQMS*TRSWNMSSEPS Trigger: GGAGGGCTCAGAGCTCATGTTCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAGGGACATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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3UTR-3UTR CAA 90 bp | AGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACAATCCTCGTACGACGGCAATGTTaGTGGAGCACCTCTCTGTTC | + |
Preference number: 3 (lower is better) Translates to: RRAALSLAVVLLCPETILVRRQC*WSTSLF Trigger: GAACAGAGAGGTGCTCCACAAACATTGCCGTCGTAC...GAGGATTGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 72 bp | CCTGTTGGTATGTGCATCACATCTAAGTTGGTGCCCTaGTACTCAGAGGCCCAGGAGAGCAGCTCTGAGCCT | + |
Preference number: 3 (lower is better) Translates to: PVGMCITSKLVP*YSEAQESSSEP Trigger: AGGCTCAGAGCTGCTCTCCTGGGCCTCTGAGTACCAGGGCACCAACTTAGATGTGATGCACATACCAACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR CAA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTGGTGGTAAAGGAAGCTaGGCAGCTGGGAAGAGTGGA | + |
Preference number: 3 (lower is better) Translates to: PCGCWDLNSGPSEEQLGAGGKGS*AAGKSG Trigger: TCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACC...AGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTC | + |
Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGI*TLDLRKSSWVL Trigger: GAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 72 bp | GTCTACCTCCTGTTGGTATGTGCATCACATCTAAGTTaGTGCCCTGGTACTCAGAGGCCCAGGAGAGCAGCT | + |
Preference number: 3 (lower is better) Translates to: VYLLLVCASHLS*CPGTQRPRRAA Trigger: AGCTGCTCTCCTGGGCCTCTGAGTACCAGGGCACCAACTTAGATGTGATGCACATACCAACAGGAGGTAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR TCA 72 bp | TGGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACTaGGCCATCTCACCAGCCCCTCAACAGATTTCTGAT | + |
Preference number: 3 (lower is better) Translates to: WTFGRAVGCSYH*AISPAPQQISD Trigger: ATCAGAAATCTGTTGAGGGGCTGGTGAGATGGCTCAGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 72 bp | AAGGACCCAAGGAGTGGGGTACGACGGCAATGTTTGTaGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCTG | + |
Preference number: 3 (lower is better) Translates to: KDPRSGVRRQCL*STSLFWKLLFL Trigger: CAGGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCCCACTCCTTGGGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 72 bp | CAGCTTCTCGGGCTGTATGCGCCCTCTTGTGGCTTTTaGTGGGTATTTTTCTCTGCTCAGATTTGCAGTGGG | + |
Preference number: 3 (lower is better) Translates to: QLLGLYAPSCGF*WVFFSAQICSG Trigger: CCCACTGCAAATCTGAGCAGAGAAAAATACCCACCAAAAGCCACAAGAGGGCGCATACAGCCCGAGAAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 72 bp | CTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTG | + |
Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGPSEEQL Trigger: CAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR-3UTR CAA 90 bp | CTTCTAAGAATCTCTGACTATAAGGGGTCTCTGCTCTGCATGTCCCAAGCTGCTTTTCTCTGCTCAGATTaGCAGTGGGCTTCCCTCTGG | + |
Preference number: 3 (lower is better) Translates to: LLRISDYKGSLLCMSQAAFLCSD*QWASLW Trigger: CCAGAGGGAAGCCCACTGCAAATCTGAGCAGAGAAA...AGCAGCTTGGGACATGCAGAGCAGAGACCCCTTATAGTCAGAGATTCTTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR GCA 72 bp | CAGATTTCTGATCGTGAGAAAAGACTGGAACATAGATaGTTTCTCTCCTACGGCCTGACCTCCAGGGTGACA | + |
Preference number: 3 (lower is better) Translates to: QISDREKRLEHR*FLSYGLTSRVT Trigger: TGTCACCCTGGAGGTCAGGCCGTAGGAGAGAAAGCATCTATGTTCCAGTCTTTTCTCACGATCAGAAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CCA 72 bp | GTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTaGAAACTTCTCTTCCTGCTAGCGTGCATTATTTCT | + |
Preference number: 3 (lower is better) Translates to: VRRQCLWSTSLF*KLLFLLACIIS Trigger: AGAAATAATGCACGCTAGCAGGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR TCA 72 bp | ACTTCAGTGTCTCAACAGATTTCTGTAGCTGTCTTCTaGCACACCACAAGAGGGAGTCAGATCTCGTTACAG | + |
Preference number: 3 (lower is better) Translates to: TSVSQQISVAVF*HTTRGSQISLQ Trigger: CTGTAACGAGATCTGACTCCCTCTTGTGGTGTGTCAGAAGACAGCTACAGAAATCTGTTGAGACACTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR GCA 72 bp | ACCTCTCTGTTCTGGAAACTTCTCTTCCTGCTAGCGTaGATTATTTCTCAGGGTCCAATTTCCCAGAAATAC | + |
Preference number: 3 (lower is better) Translates to: TSLFWKLLFLLA*IISQGPISQKY Trigger: GTATTTCTGGGAAATTGGACCCTGAGAAATAATGCACGCTAGCAGGAAGAGAAGTTTCCAGAACAGAGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | AGGCCCAGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACAGCTCCTGTGCTGGGCTaGGTGGCAGTGCTCGGGCCT | + |
Preference number: 4 (lower is better) Translates to: RPRRAALSLAVVLLCPETAPVLG*VAVLGP Trigger: AGGCCCGAGCACTGCCACTCAGCCCAGCACAGGAGC...TGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCTGGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | AGGCCCAGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACATTAGGGCCTGGCGGATaGCCTGCAACTCCCGGGGCT | + |
Preference number: 4 (lower is better) Translates to: RPRRAALSLAVVLLCPETLGPGG*PATPGA Trigger: AGCCCCGGGAGTTGCAGGGCATCCGCCAGGCCCTAA...TGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCTGGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | AGGCCCAGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACACTCCTCCCATGCTCCTaGCTCTGGCCCCTTGCTGCC | + |
Preference number: 4 (lower is better) Translates to: RPRRAALSLAVVLLCPETLLPCS*LWPLAA Trigger: GGCAGCAAGGGGCCAGAGGCAGGAGCATGGGAGGAG...TGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCTGGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | TATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTGAGTCTCCCAGCGCTGCCCGGCCCACCTaGCTCTCTGGTGCCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: YGETEARGLKQRVCESPSAARPT*LSGASR Trigger: TCTGCTGGCACCAGAGAGGCAGGTGGGCCGGGCAGC...GCTGGGAGACTCACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TGGGTGGGTGGTAAAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCTGGAAGCACCGGGACTaGGGGAGGCGGCACAGCAGG | + |
Preference number: 4 (lower is better) Translates to: WVGGKGSLAAGKSGLRGSWKHRD*GRRHSR Trigger: CCTGCTGTGCCGCCTCCCCCAGTCCCGGTGCTTCCA...GGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCCGGGGGCCCAGGTGCACAGCCAGGGTCTTaGAGGTGCAACCTGTGCTGG | + |
Preference number: 4 (lower is better) Translates to: KEAWQLGRVDLEAPGGPGAQPGS*RCNLCW Trigger: CCAGCACAGGTTGCACCTCCAAGACCCTGGCTGTGC...ACCTGGGCCCCCGGGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | ATCCCTGTGGGCTATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTGCGCTGGAGCTCCTGTaGTGGGCTGAGTGGCAGTGC | + |
Preference number: 4 (lower is better) Translates to: IPVGYGETEARGLKQRVCALELL*WAEWQC Trigger: GCACTGCCACTCAGCCCAGCACAGGAGCTCCAGCGC...ACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATAGCCCACAGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | GACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACTGAGCCATCTCACCAGCCCCGTACGTGCTGGCTGTTaGGACCCGCCTGCCTGTACC | + |
Preference number: 4 (lower is better) Translates to: DLRKSSWVLLPLSHLTSPVRAGC*DPPACT Trigger: GGTACAGGCAGGCGGGTCCCAACAGCCAGCACGTAC...GGGGCTGGTGAGATGGCTCAGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | CTTGATGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGCAAAAGAAGCCAGGATGGAAGCACCGGGACTaGGGGAGGCGGCACAGCAGG | + |
Preference number: 4 (lower is better) Translates to: LDAPASLHGQWERQKKPGWKHRD*GRRHSR Trigger: CCTGCTGTGCCGCCTCCCCCAGTCCCGGTGCTTCCA...TCCTGGCTTCTTTTGCCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | GACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACTGAGCCATCTCACCAGCCCCGCTCAACGTGGCAATTaGAGACCCTGGGGGCACAGC | + |
Preference number: 4 (lower is better) Translates to: DLRKSSWVLLPLSHLTSPAQRGN*RPWGHS Trigger: GCTGTGCCCCCAGGGTCTTCAATTGCCACGTTGAGC...GGGGCTGGTGAGATGGCTCAGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | ATCCCTGTGGGCTATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTACTGAGCTCTCCCTCTaGAGCAGCTGTCGAGGGGGC | + |
Preference number: 4 (lower is better) Translates to: IPVGYGETEARGLKQRVCTELSL*SSCRGG Trigger: GCCCCCTCGACAGCTGCTGCAGAGGGAGAGCTCAGT...ACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATAGCCCACAGGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTGCTGCCCGGCCCACCTaGCTCTCTGGTGCCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: SWELPNLYCRGAHSYTIPAARPT*LSGASR Trigger: TCTGCTGGCACCAGAGAGGCAGGTGGGCCGGGCAGC...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | GGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCGCCGAGGGAACCATCTaGGGAAAGCCGGCGCCGCAG | + |
Preference number: 4 (lower is better) Translates to: GCWDLNSGPSEEQLGALTAEGTI*GKPAPQ Trigger: CTGCGGCGCCGGCTTTCCGCAGATGGTTCCCTCGGC...GGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACAATCCTCGGGGCCACTAGCTTCTaGCAGCCGCACACACAGAGC | + |
Preference number: 4 (lower is better) Translates to: RRAALSLAVVLLCPETILGATSF*QPHTQS Trigger: GCTCTGTGTGTGCGGCTGCCAGAAGCTAGTGGCCCC...GAGGATTGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTGCTCTGCGCTCAGCATaGCCCGGGCCCGACTTAGGG | + |
Preference number: 4 (lower is better) Translates to: SWELPNLYCRGAHSYTIPALRSA*PGPDLG Trigger: CCCTAAGTCGGGCCCGGGCCATGCTGAGCGCAGAGC...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACAATCCTCGTTGCAGGAAGCCTGTaGGCTAGGGCTTCAGGGGGC | + |
Preference number: 4 (lower is better) Translates to: RRAALSLAVVLLCPETILVAGSL*ARASGG Trigger: GCCCCCTGAAGCCCTAGCCCACAGGCTTCCTGCAAC...GAGGATTGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | AAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCCGGGGGCCCAGGTGTCCTTGGTGTTGAGTaGGGAGCTCCAGAACTCCAT | + |
Preference number: 4 (lower is better) Translates to: KEAWQLGRVDLEAPGGPGVLGVE*GAPELH Trigger: ATGGAGTTCTGGAGCTCCTCACTCAACACCAAGGAC...ACCTGGGCCCCCGGGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | ATCCCTGTGGGCTATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTAGGTCCTGCACTAGCTaGCCCACGGCTGTGTATCGG | + |
Preference number: 4 (lower is better) Translates to: IPVGYGETEARGLKQRVCRSCTS*PTAVYR Trigger: CCGATACACAGCCGTGGGTCAGCTAGTGCAGGACCT...ACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATAGCCCACAGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | GACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACTGAGCCATCTCACCAGCCCCTGGGTCGAAGAGGCTTaGGAACAGAGCGATGCAGGG | + |
Preference number: 4 (lower is better) Translates to: DLRKSSWVLLPLSHLTSPWVEEA*EQSDAG Trigger: CCCTGCATCGCTCTGTTCTCAAGCCTCTTCGACCCA...GGGGCTGGTGAGATGGCTCAGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | CTGCCGTGGGGCCCACAGCTACACCATTCCTCATTATCAAGCTTTAGTAAGGACGCTCCTGTGCTGGGCTaGGTGGCAGTGCTCGGGCCT | + |
Preference number: 4 (lower is better) Translates to: LPWGPQLHHSSLSSFSKDAPVLG*VAVLGP Trigger: AGGCCCGAGCACTGCCACTCAGCCCAGCACAGGAGC...GTCCTTACTAAAGCTTGATAATGAGGAATGGTGTAGCTGTGGGCCCCACGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | CAAAAGAAGCCAGGACTACCCTCCCACCACGCCCCTATGGCTATCAGGAGGATTACTGAGCTCTCCCTCTaGAGCAGCTGTCGAGGGGGC | + |
Preference number: 4 (lower is better) Translates to: QKKPGLPSHHAPMAIRRITELSL*SSCRGG Trigger: GCCCCCTCGACAGCTGCTGCAGAGGGAGAGCTCAGT...AATCCTCCTGATAGCCATAGGGGCGTGGTGGGAGGGTAGTCCTGGCTTCTTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | GTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCTGCTCAGGGCCCAGCTCTaGGCTCAGCATGGCCCGGGC | + |
Preference number: 4 (lower is better) Translates to: VRRQCLWSTSLFWKLLFLLRAQL*AQHGPG Trigger: GCCCGGGCCATGCTGAGCGCAGAGCTGGGCCCTGAG...CAGGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | ATCCCTGTGGGCTATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTAGCAGCTTGCAGGCCTaGAGGAGCCACTTGACCTGG | + |
Preference number: 4 (lower is better) Translates to: IPVGYGETEARGLKQRVCSSLQA*RSHLTW Trigger: CCAGGTCAAGTGGCTCCTGCAGGCCTGCAAGCTGCT...ACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATAGCCCACAGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | AGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACAATCCTCAGCAGCTTGCAGGCCTaGAGGAGCCACTTGACCTGG | + |
Preference number: 4 (lower is better) Translates to: RRAALSLAVVLLCPETILSSLQA*RSHLTW Trigger: CCAGGTCAAGTGGCTCCTGCAGGCCTGCAAGCTGCT...GAGGATTGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCGCGCTGGAGCTCCTGTaGTGGGCTGAGTGGCAGTGC | + |
Preference number: 4 (lower is better) Translates to: TMWLLGFELWTFGRAVGCALELL*WAEWQC Trigger: GCACTGCCACTCAGCCCAGCACAGGAGCTCCAGCGC...GCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | TATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTGAGTCTCCCAGCCCAGGGTCTTGGAGGTaGAACCTGTGCTGGGGTCCT | + |
Preference number: 4 (lower is better) Translates to: YGETEARGLKQRVCESPSPGSWR*NLCWGP Trigger: AGGACCCCAGCACAGGTTGCACCTCCAAGACCCTGG...GCTGGGAGACTCACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TGGGTGGGTGGTAAAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCGCCCACCTGCCTCTCTaGTGCCAGCAGAGAGCAGAA | + |
Preference number: 4 (lower is better) Translates to: WVGGKGSLAAGKSGLRGSAHLPL*CQQRAE Trigger: TTCTGCTCTCTGCTGGCACCAGAGAGGCAGGTGGGC...GGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACAATCCTCGGACCAGCCCGAACCTaGGTCAGTAGGTCCTGCACT | + |
Preference number: 4 (lower is better) Translates to: RRAALSLAVVLLCPETILGPART*VSRSCT Trigger: AGTGCAGGACCTACTGACCCAGGTTCGGGCTGGTCC...GAGGATTGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AGGTGGACTTATGAAGATCGGCCAGAGGTGGTGGCAGACACCACAGAGAACTGTGCCCGACTTAGGGCCTaGCGGATGCCCTGCAACTCC | + |
Preference number: 4 (lower is better) Translates to: RWTYEDRPEVVADTTENCARLRA*RMPCNS Trigger: GGAGTTGCAGGGCATCCGCCAGGCCCTAAGTCGGGC...ACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGATCTTCATAAGTCCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | GTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCTGAAGGCTCCAGGCCCCTaGGTCCGGGCCAGGCGGAAG | + |
Preference number: 4 (lower is better) Translates to: VRRQCLWSTSLFWKLLFLKAPGP*VRARRK Trigger: CTTCCGCCTGGCCCGGACCCAGGGGCCTGGAGCCTT...CAGGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | GGAGTTGCACAGGGTCTTGATGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGGAAGAAAGAGTCAGGTaGGACCCGAAGGCTCCAGGC | + |
Preference number: 4 (lower is better) Translates to: GVAQGLDAPASLHGQWEREERVR*DPKAPG Trigger: GCCTGGAGCCTTCGGGTCCCACCTGACTCTTTCTTC...CCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAGACCCTGTGCAACTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | GACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACTGAGCCATCTCACCAGCCCCAGCTGCAGCAGCTTCTaGCGCACCTGTTCTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: DLRKSSWVLLPLSHLTSPSCSSF*RTCSVS Trigger: GGAGACAGAACAGGTGCGCCAGAAGCTGCTGCAGCT...GGGGCTGGTGAGATGGCTCAGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCCGGGGGCCCAGGTGCATTCTCTCCTGCCTaGCTCTTCAGGGCTGTGTAT | + |
Preference number: 4 (lower is better) Translates to: KEAWQLGRVDLEAPGGPGAFSPA*LFRAVY Trigger: ATACACAGCCCTGAAGAGCCAGGCAGGAGAGAATGC...ACCTGGGCCCCCGGGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | CTGCCGTGGGGCCCACAGCTACACCATTCCTCATTATCAAGCTTTAGTAAGGACGCTGGAAGCTGTGGGTaGCCGGCAGGCGGCGCTGTT | + |
Preference number: 4 (lower is better) Translates to: LPWGPQLHHSSLSSFSKDAGSCG*PAGGAV Trigger: AACAGCGCCGCCTGCCGGCCACCCACAGCTTCCAGC...GTCCTTACTAAAGCTTGATAATGAGGAATGGTGTAGCTGTGGGCCCCACGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | TGGGTGGGTGGTAAAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCCACACGATATCCCACTaGGCTCTCCCTCTGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: WVGGKGSLAAGKSGLRGSHTISH*ALPLQQ Trigger: CTGCTGCAGAGGGAGAGCTCAGTGGGATATCGTGTG...GGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | AGGTGGACTTATGAAGATCGGCCAGAGGTGGTGGCAGACACCACAGAGAACTGTAGAGCCCTCCTCCTCTaGGCTGCTGGGAGAGCAGCA | + |
Preference number: 4 (lower is better) Translates to: RWTYEDRPEVVADTTENCRALLL*AAGRAA Trigger: TGCTGCTCTCCCAGCAGCTCAGAGGAGGAGGGCTCT...ACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGATCTTCATAAGTCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | GGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCAGCCACCCTCTCCAGTaGGCAGGGTGGGTTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: GCWDLNSGPSEEQLGALTSHPLQ*AGWVPG Trigger: TCCTGGAACCCACCCTGCTCACTGGAGAGGGTGGCT...GGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | CTTCTAAGAATCTCTGACTATAAGGGGTCTCTGCTCTGCATGTCCCAAGCTGCTCTCAGGGCCCAGCTCTaGGCTCAGCATGGCCCGGGC | + |
Preference number: 4 (lower is better) Translates to: LLRISDYKGSLLCMSQAALRAQL*AQHGPG Trigger: GCCCGGGCCATGCTGAGCGCAGAGCTGGGCCCTGAG...AGCAGCTTGGGACATGCAGAGCAGAGACCCCTTATAGTCAGAGATTCTTAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | GACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACTGAGCCATCTCACCAGCCCCCTGCCTCTGGCCCCTTaGTGCCTGTCTTTGCCTTTT | + |
Preference number: 4 (lower is better) Translates to: DLRKSSWVLLPLSHLTSPLPLAP*CLSLPF Trigger: AAAAGGCAAAGACAGGCAGCAAGGGGCCAGAGGCAG...GGGGCTGGTGAGATGGCTCAGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | GGGTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCCTCCTCCCATGCTCCTaGCTCTGGCCCCTTGCTGCC | + |
Preference number: 4 (lower is better) Translates to: GYDGNVCGAPLCSGNFSSLLPCS*LWPLAA Trigger: GGCAGCAAGGGGCCAGAGGCAGGAGCATGGGAGGAG...GGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | CAAAAGAAGCCAGGACTACCCTCCCACCACGCCCCTATGGCTATCAGGAGGATTTGTCTCCTCCTCCCATaGTCCTGCCTCTGGCCCCTT | + |
Preference number: 4 (lower is better) Translates to: QKKPGLPSHHAPMAIRRICLLLP*SCLWPL Trigger: AAGGGGCCAGAGGCAGGAGCATGGGAGGAGGAGACA...AATCCTCCTGATAGCCATAGGGGCGTGGTGGGAGGGTAGTCCTGGCTTCTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTGAGTCTCCCAGCAGCTGCACCAGGTCCTaGAACATGAGCTCTGAGCCC | + |
Preference number: 4 (lower is better) Translates to: YGETEARGLKQRVCESPSSCTRS*NMSSEP Trigger: GGGCTCAGAGCTCATGTTCCAGGACCTGGTGCAGCT...GCTGGGAGACTCACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | CTTGATGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGCAAAAGAAGCCAGGAGGACCAGCCCGAACCTaGGTCAGTAGGTCCTGCACT | + |
Preference number: 4 (lower is better) Translates to: LDAPASLHGQWERQKKPGGPART*VSRSCT Trigger: AGTGCAGGACCTACTGACCCAGGTTCGGGCTGGTCC...TCCTGGCTTCTTTTGCCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTGAGTCTCCCAGCGAAGAAAGAGTCAGGTaGGACCCGAAGGCTCCAGGC | + |
Preference number: 4 (lower is better) Translates to: YGETEARGLKQRVCESPSEERVR*DPKAPG Trigger: GCCTGGAGCCTTCGGGTCCCACCTGACTCTTTCTTC...GCTGGGAGACTCACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTCTGGAGCTCCTGTGCTaGGCTGAGTGGCAGTGCTCG | + |
Preference number: 4 (lower is better) Translates to: SWELPNLYCRGAHSYTIPLELLC*AEWQCS Trigger: CGAGCACTGCCACTCAGCCCAGCACAGGAGCTCCAG...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | CTTGATGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGCAAAAGAAGCCAGGAGGCAGTATCCACAGATaGGCTGCACCAGGTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: LDAPASLHGQWERQKKPGGSIHR*AAPGPG Trigger: TCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCC...TCCTGGCTTCTTTTGCCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | GGGTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCAGAGCCCTCCTCCTCTaGGCTGCTGGGAGAGCAGCA | + |
Preference number: 4 (lower is better) Translates to: GYDGNVCGAPLCSGNFSSRALLL*AAGRAA Trigger: TGCTGCTCTCCCAGCAGCTCAGAGGAGGAGGGCTCT...GGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | CTGCCGTGGGGCCCACAGCTACACCATTCCTCATTATCAAGCTTTAGTAAGGACAGCCACCCTCTCCAGTaGGCAGGGTGGGTTCCAGGA | + |
Preference number: 4 (lower is better) Translates to: LPWGPQLHHSSLSSFSKDSHPLQ*AGWVPG Trigger: TCCTGGAACCCACCCTGCTCACTGGAGAGGGTGGCT...GTCCTTACTAAAGCTTGATAATGAGGAATGGTGTAGCTGTGGGCCCCACGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | TGGGTGGGTGGTAAAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCAGCTCCAGAACTCCATaGCCAGATGGGAGATGGCCT | + |
Preference number: 4 (lower is better) Translates to: WVGGKGSLAAGKSGLRGSSSRTP*PDGRWP Trigger: AGGCCATCTCCCATCTGGGCATGGAGTTCTGGAGCT...GGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | GACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACTGAGCCATCTCACCAGCCCCTTGAGAACAGAGCGATaGAGGGACTTCTCCAGGACC | + |
Preference number: 4 (lower is better) Translates to: DLRKSSWVLLPLSHLTSPLRTER*RDFSRT Trigger: GGTCCTGGAGAAGTCCCTGCATCGCTCTGTTCTCAA...GGGGCTGGTGAGATGGCTCAGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | CTTCTAAGAATCTCTGACTATAAGGGGTCTCTGCTCTGCATGTCCCAAGCTGCTGCCGAGGGAACCATCTaGGGAAAGCCGGCGCCGCAG | + |
Preference number: 4 (lower is better) Translates to: LLRISDYKGSLLCMSQAAAEGTI*GKPAPQ Trigger: CTGCGGCGCCGGCTTTCCGCAGATGGTTCCCTCGGC...AGCAGCTTGGGACATGCAGAGCAGAGACCCCTTATAGTCAGAGATTCTTAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | TATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTGAGTCTCCCAGCCTGTGTATAGCAGCTTaGAGGCCTGCAGGAGCCACT | + |
Preference number: 4 (lower is better) Translates to: YGETEARGLKQRVCESPSLCIAA*RPAGAT Trigger: AGTGGCTCCTGCAGGCCTGCAAGCTGCTATACACAG...GCTGGGAGACTCACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
CDS-3UTR GCA 90 bp | TATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTGAGTCTCCCAGCACCTGCATTCTCTCCTaGCTGGCTCTTCAGGGCTGT | + |
Preference number: 4 (lower is better) Translates to: YGETEARGLKQRVCESPSTCILS*LALQGC Trigger: ACAGCCCTGAAGAGCCAGGCAGGAGAGAATGCAGGT...GCTGGGAGACTCACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
CDS-3UTR GCA 90 bp | AGGTGGACTTATGAAGATCGGCCAGAGGTGGTGGCAGACACCACAGAGAACTGTGCTACTCGGAGGAGATaGTGGAAGCTGTGGGTGGCC | + |
Preference number: 4 (lower is better) Translates to: RWTYEDRPEVVADTTENCATRRR*WKLWVA Trigger: GGCCACCCACAGCTTCCAGCATCTCCTCCGAGTAGC...ACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGATCTTCATAAGTCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTGCTACTCGGAGGAGATaGTGGAAGCTGTGGGTGGCC | + |
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQLGAATRRR*WKLWVA Trigger: GGCCACCCACAGCTTCCAGCATCTCCTCCGAGTAGC...AGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | AGGTGGACTTATGAAGATCGGCCAGAGGTGGTGGCAGACACCACAGAGAACTGTCCAGGGTCTTGGAGGTaGAACCTGTGCTGGGGTCCT | + |
Preference number: 4 (lower is better) Translates to: RWTYEDRPEVVADTTENCPGSWR*NLCWGP Trigger: AGGACCCCAGCACAGGTTGCACCTCCAAGACCCTGG...ACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGATCTTCATAAGTCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | TGGGTGGGTGGTAAAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCCCTCTGGCCCCTTGCTaGCTGTCTTTGCCTTTTCTG | + |
Preference number: 4 (lower is better) Translates to: WVGGKGSLAAGKSGLRGSPLAPC*LSLPFL Trigger: CAGAAAAGGCAAAGACAGGCAGCAAGGGGCCAGAGG...GGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | ATCCCTGTGGGCTATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTCTGCCTCTGGCCCCTTaGTGCCTGTCTTTGCCTTTT | + |
Preference number: 4 (lower is better) Translates to: IPVGYGETEARGLKQRVCLPLAP*CLSLPF Trigger: AAAAGGCAAAGACAGGCAGCAAGGGGCCAGAGGCAG...ACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATAGCCCACAGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | AGGTGGACTTATGAAGATCGGCCAGAGGTGGTGGCAGACACCACAGAGAACTGTTGTCTCCTCCTCCCATaGTCCTGCCTCTGGCCCCTT | + |
Preference number: 4 (lower is better) Translates to: RWTYEDRPEVVADTTENCCLLLP*SCLWPL Trigger: AAGGGGCCAGAGGCAGGAGCATGGGAGGAGGAGACA...ACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGATCTTCATAAGTCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACAATCCTCCACAGAGCCTGGCACTaGCGAGTGTTAGATTTCCGC | + |
Preference number: 4 (lower is better) Translates to: RRAALSLAVVLLCPETILHRAWH*RVLDFR Trigger: GCGGAAATCTAACACTCGCCAGTGCCAGGCTCTGTG...GAGGATTGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | CTGCCGTGGGGCCCACAGCTACACCATTCCTCATTATCAAGCTTTAGTAAGGACGGGGCCACTAGCTTCTaGCAGCCGCACACACAGAGC | + |
Preference number: 4 (lower is better) Translates to: LPWGPQLHHSSLSSFSKDGATSF*QPHTQS Trigger: GCTCTGTGTGTGCGGCTGCCAGAAGCTAGTGGCCCC...GTCCTTACTAAAGCTTGATAATGAGGAATGGTGTAGCTGTGGGCCCCACGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TGGGTGGGTGGTAAAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCAGAAAGCAGAACTCATaGACCGAAGCAGAGGCCGCC | + |
Preference number: 4 (lower is better) Translates to: WVGGKGSLAAGKSGLRGSRKQNS*TEAEAA Trigger: GGCGGCCTCTGCTTCGGTCCATGAGTTCTGCTTTCT...GGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
CDS-3UTR CCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTGCCCACCTGCCTCTCTaGTGCCAGCAGAGAGCAGAA | + |
Preference number: 4 (lower is better) Translates to: SWELPNLYCRGAHSYTIPAHLPL*CQQRAE Trigger: TTCTGCTCTCTGCTGGCACCAGAGAGGCAGGTGGGC...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTGGCTGGCTGAGAGGCTaGTCAGGTAGTAGCCACCCT | + |
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQLGAGWLRG*SGSSHP Trigger: AGGGTGGCTACTACCTGACCAGCCTCTCAGCCAGCC...AGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTGGCAGTGCTCGGGCCTaGCTTAGGCCACTCAACAAG | + |
Preference number: 4 (lower is better) Translates to: SWELPNLYCRGAHSYTIPGSARA*LRPLNK Trigger: CTTGTTGAGTGGCCTAAGCCAGGCCCGAGCACTGCC...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TCAGATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACGCTGGAAGCTGTGGGTaGCCGGCAGGCGGCGCTGTT | + |
Preference number: 4 (lower is better) Translates to: SDLVTDGCEPPCGCWDLNAGSCG*PAGGAV Trigger: AACAGCGCCGCCTGCCGGCCACCCACAGCTTCCAGC...GTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | GGGTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCGTTGCAGGAAGCCTGTaGGCTAGGGCTTCAGGGGGC | + |
Preference number: 4 (lower is better) Translates to: GYDGNVCGAPLCSGNFSSVAGSL*ARASGG Trigger: GCCCCCTGAAGCCCTAGCCCACAGGCTTCCTGCAAC...GGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | GGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCCCATGCTCCTGCCTCTaGCCCCTTGCTGCCTGTCTT | + |
Preference number: 4 (lower is better) Translates to: GCWDLNSGPSEEQLGALTPCSCL*PLAACL Trigger: AAGACAGGCAGCAAGGGGCCAGAGGCAGGAGCATGG...GGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCACACGATATCCCACTaGGCTCTCCCTCTGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQLGAHTISH*ALPLQQ Trigger: CTGCTGCAGAGGGAGAGCTCAGTGGGATATCGTGTG...AGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTTGGGTCGAAGAGGCTTaGGAACAGAGCGATGCAGGG | + |
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQLGAWVEEA*EQSDAG Trigger: CCCTGCATCGCTCTGTTCTCAAGCCTCTTCGACCCA...AGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | CTGCCGTGGGGCCCACAGCTACACCATTCCTCATTATCAAGCTTTAGTAAGGACGCTCAACGTGGCAATTaGAGACCCTGGGGGCACAGC | + |
Preference number: 4 (lower is better) Translates to: LPWGPQLHHSSLSSFSKDAQRGN*RPWGHS Trigger: GCTGTGCCCCCAGGGTCTTCAATTGCCACGTTGAGC...GTCCTTACTAAAGCTTGATAATGAGGAATGGTGTAGCTGTGGGCCCCACGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | CTTGATGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGCAAAAGAAGCCAGGACTCTTTGTGGGTGGCTaGCTGATGAATGGCTCTGGG | + |
Preference number: 4 (lower is better) Translates to: LDAPASLHGQWERQKKPGLFVGG*LMNGSG Trigger: CCCAGAGCCATTCATCAGGCAGCCACCCACAAAGAG...TCCTGGCTTCTTTTGCCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025818.8 |
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CDS-3UTR GCA 90 bp | AGGTGGACTTATGAAGATCGGCCAGAGGTGGTGGCAGACACCACAGAGAACTGTCACCTGCCTCTCTGGTaGCAGCAGAGAGCAGAAAGC | + |
Preference number: 4 (lower is better) Translates to: RWTYEDRPEVVADTTENCHLPLW*QQRAES Trigger: GCTTTCTGCTCTCTGCTGGCACCAGAGAGGCAGGTG...ACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGATCTTCATAAGTCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | CTGTATGCGCCCTCTTGTGGCTTTTGGTGGGTATTTTTCTCTGCTCAGATTTGCTTAGGGCCTGGCGGATaGCCTGCAACTCCCGGGGCT | + |
Preference number: 4 (lower is better) Translates to: LYAPSCGFWWVFFSAQICLGPGG*PATPGA Trigger: AGCCCCGGGAGTTGCAGGGCATCCGCCAGGCCCTAA...GCAAATCTGAGCAGAGAAAAATACCCACCAAAAGCCACAAGAGGGCGCATACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | ATCCCTGTGGGCTATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTTTGAGAACAGAGCGATaGAGGGACTTCTCCAGGACC | + |
Preference number: 4 (lower is better) Translates to: IPVGYGETEARGLKQRVCLRTER*RDFSRT Trigger: GGTCCTGGAGAAGTCCCTGCATCGCTCTGTTCTCAA...ACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATAGCCCACAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | GGCCTCTGTTGGTCCTTGGTGTTGAGTGAGGAGCTCCAGAACTCCATGCCCAGAGTACAAAGTTCAGGTTaGTGGCTCCCAGAGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: GLCWSLVLSEELQNSMPRVQSSG*WLPEGV Trigger: CACACCCTCTGGGAGCCACCAACCTGAACTTTGTAC...TCTGGGCATGGAGTTCTGGAGCTCCTCACTCAACACCAAGGACCAACAGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224288.2 |
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CDS-3UTR CCA 90 bp | AGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACAATCCTCGTACAAAGTTCAGGTTaGTGGCTCCCAGAGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: RRAALSLAVVLLCPETILVQSSG*WLPEGV Trigger: CACACCCTCTGGGAGCCACCAACCTGAACTTTGTAC...GAGGATTGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTTGCCCAGATGGGAGATaGCCTCCAGCTCTTTGTGGG | + |
Preference number: 4 (lower is better) Translates to: SWELPNLYCRGAHSYTIPCPDGR*PPALCG Trigger: CCCACAAAGAGCTGGAGGCCATCTCCCATCTGGGCA...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | GGAGTTGCACAGGGTCTTGATGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGGTCTTTCCGTTTGGCTaGAAGATGTCCCTGGAAGCA | + |
Preference number: 4 (lower is better) Translates to: GVAQGLDAPASLHGQWERVFPFG*KMSLEA Trigger: TGCTTCCAGGGACATCTTCCAGCCAAACGGAAAGAC...CCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAGACCCTGTGCAACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | ATTTCTGATCGTGAGAAAAGACTGGAACATAGATGCTTTCTCTCCTACGGCCTGAAGGCTCCAGGCCCCTaGGTCCGGGCCAGGCGGAAG | + |
Preference number: 4 (lower is better) Translates to: ISDREKRLEHRCFLSYGLKAPGP*VRARRK Trigger: CTTCCGCCTGGCCCGGACCCAGGGGCCTGGAGCCTT...CAGGCCGTAGGAGAGAAAGCATCTATGTTCCAGTCTTTTCTCACGATCAGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | ATCCCTGTGGGCTATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTGCATTCTCTCCTGCCTaGCTCTTCAGGGCTGTGTAT | + |
Preference number: 4 (lower is better) Translates to: IPVGYGETEARGLKQRVCAFSPA*LFRAVY Trigger: ATACACAGCCCTGAAGAGCCAGGCAGGAGAGAATGC...ACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATAGCCCACAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | GTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCTGCTGGAGCTCCTGTGCTaGGCTGAGTGGCAGTGCTCG | + |
Preference number: 4 (lower is better) Translates to: VRRQCLWSTSLFWKLLFLLELLC*AEWQCS Trigger: CGAGCACTGCCACTCAGCCCAGCACAGGAGCTCCAG...CAGGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCCGGGGGCCCAGGTTTGGTAGCACAGAGTTaGCTCAACGTGGCAATTGAA | + |
Preference number: 4 (lower is better) Translates to: KEAWQLGRVDLEAPGGPGLVAQS*LNVAIE Trigger: TTCAATTGCCACGTTGAGCCAACTCTGTGCTACCAA...ACCTGGGCCCCCGGGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CAA 72 bp | TGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTaGGGTGCTCTTACCACTGAGCCATCTCACCAGCCC | + |
Preference number: 4 (lower is better) Translates to: CWDLNSGPSEEQ*GALTTEPSHQP Trigger: GGGCTGGTGAGATGGCTCAGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | CTTGATGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGCAAAAGAAGCCAGGAGTTGGTCCTTGGTGTTaGGTGAGGAGCTCCAGAACT | + |
Preference number: 4 (lower is better) Translates to: LDAPASLHGQWERQKKPGVGPWC*VRSSRT Trigger: AGTTCTGGAGCTCCTCACTCAACACCAAGGACCAAC...TCCTGGCTTCTTTTGCCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | GGGTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCCACCTGCCTCTCTGGTaGCAGCAGAGAGCAGAAAGC | + |
Preference number: 4 (lower is better) Translates to: GYDGNVCGAPLCSGNFSSHLPLW*QQRAES Trigger: GCTTTCTGCTCTCTGCTGGCACCAGAGAGGCAGGTG...GGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTACCTGCATTCTCTCCTaGCTGGCTCTTCAGGGCTGT | + |
Preference number: 4 (lower is better) Translates to: SWELPNLYCRGAHSYTIPTCILS*LALQGC Trigger: ACAGCCCTGAAGAGCCAGGCAGGAGAGAATGCAGGT...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TGGGTGGGTGGTAAAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCCTTCGATATAGTGGCTaGAGACAAAAGAGGGGCCAC | + |
Preference number: 4 (lower is better) Translates to: WVGGKGSLAAGKSGLRGSLRYSG*RQKRGH Trigger: GTGGCCCCTCTTTTGTCTCCAGCCACTATATCGAAG...GGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | CTGCCGTGGGGCCCACAGCTACACCATTCCTCATTATCAAGCTTTAGTAAGGACAGCTGCACCAGGTCCTaGAACATGAGCTCTGAGCCC | + |
Preference number: 4 (lower is better) Translates to: LPWGPQLHHSSLSSFSKDSCTRS*NMSSEP Trigger: GGGCTCAGAGCTCATGTTCCAGGACCTGGTGCAGCT...GTCCTTACTAAAGCTTGATAATGAGGAATGGTGTAGCTGTGGGCCCCACGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | GGGTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCTGGCTGCCTGATGAATaGCTCTGGGGAGTCGGAGAG | + |
Preference number: 4 (lower is better) Translates to: GYDGNVCGAPLCSGNFSSWLPDE*LWGVGE Trigger: CTCTCCGACTCCCCAGAGCCATTCATCAGGCAGCCA...GGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025818.8 |
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CDS-3UTR CCA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCCCAGCTCTTTGTGGGTaGCTGCCTGATGAATGGCTC | + |
Preference number: 4 (lower is better) Translates to: TMWLLGFELWTFGRAVGCPALCG*LPDEWL Trigger: GAGCCATTCATCAGGCAGCCACCCACAAAGAGCTGG...GCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | ATTTCTGATCGTGAGAAAAGACTGGAACATAGATGCTTTCTCTCCTACGGCCTGGCTCTGCGCTCAGCATaGCCCGGGCCCGACTTAGGG | + |
Preference number: 4 (lower is better) Translates to: ISDREKRLEHRCFLSYGLALRSA*PGPDLG Trigger: CCCTAAGTCGGGCCCGGGCCATGCTGAGCGCAGAGC...CAGGCCGTAGGAGAGAAAGCATCTATGTTCCAGTCTTTTCTCACGATCAGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTGAGTCTCCCAGCCTGTTCTGTCTCCACTaGGGAAGAAAGAGTCAGGTG | + |
Preference number: 4 (lower is better) Translates to: YGETEARGLKQRVCESPSLFCLH*GRKSQV Trigger: CACCTGACTCTTTCTTCCCCAGTGGAGACAGAACAG...GCTGGGAGACTCACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTTCAGGAAGGTCGCACTaGGCCAAAACAAGGCTCAGC | + |
Preference number: 4 (lower is better) Translates to: SWELPNLYCRGAHSYTIPSGRSH*AKTRLS Trigger: GCTGAGCCTTGTTTTGGCCCAGTGCGACCTTCCTGA...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | GTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCTGCCATGCTCCTGCCTCTaGCCCCTTGCTGCCTGTCTT | + |
Preference number: 4 (lower is better) Translates to: VRRQCLWSTSLFWKLLFLPCSCL*PLAACL Trigger: AAGACAGGCAGCAAGGGGCCAGAGGCAGGAGCATGG...CAGGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
3UTR CAA 72 bp | AGTCTACCTCCTGTTGGTATGTGCATCACATCTAAGTaGGTGCCCTGGTACTCAGAGGCCCAGGAGAGCAGC | + |
Preference number: 4 (lower is better) Translates to: SLPPVGMCITSK*VPWYSEAQESS Trigger: GCTGCTCTCCTGGGCCTCTGAGTACCAGGGCACCAACTTAGATGTGATGCACATACCAACAGGAGGTAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
CDS-3UTR TCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTGTCCTTGGTGTTGAGTaGGGAGCTCCAGAACTCCAT | + |
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQLGAVLGVE*GAPELH Trigger: ATGGAGTTCTGGAGCTCCTCACTCAACACCAAGGAC...AGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
CDS-3UTR GCA 90 bp | GGGTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCAGCTCCAGAACTCCATaGCCAGATGGGAGATGGCCT | + |
Preference number: 4 (lower is better) Translates to: GYDGNVCGAPLCSGNFSSSSRTP*PDGRWP Trigger: AGGCCATCTCCCATCTGGGCATGGAGTTCTGGAGCT...GGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
CDS-3UTR GCA 90 bp | GGGTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCCTGTGTATAGCAGCTTaGAGGCCTGCAGGAGCCACT | + |
Preference number: 4 (lower is better) Translates to: GYDGNVCGAPLCSGNFSSLCIAA*RPAGAT Trigger: AGTGGCTCCTGCAGGCCTGCAAGCTGCTATACACAG...GGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTGAACTCATCAGCACCTaGATTCTCTCCTGCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: SWELPNLYCRGAHSYTIPELIST*ILSCLA Trigger: AGCCAGGCAGGAGAGAATGCAGGTGCTGATGAGTTC...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | GGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCGTACAAAGTTCAGGTTaGTGGCTCCCAGAGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: GCWDLNSGPSEEQLGALTVQSSG*WLPEGV Trigger: CACACCCTCTGGGAGCCACCAACCTGAACTTTGTAC...GGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AAGAATGTCCCTGGTACGGCAGTATCCACAGATGAGCTGCACCAGGTCCTGGAAGTACAAAGTTCAGGTTaGTGGCTCCCAGAGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: KNVPGTAVSTDELHQVLEVQSSG*WLPEGV Trigger: CACACCCTCTGGGAGCCACCAACCTGAACTTTGTAC...TTCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAGGGACATTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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CDS-3UTR CCA 90 bp | CTGCCGTGGGGCCCACAGCTACACCATTCCTCATTATCAAGCTTTAGTAAGGACCACAGAGCCTGGCACTaGCGAGTGTTAGATTTCCGC | + |
Preference number: 4 (lower is better) Translates to: LPWGPQLHHSSLSSFSKDHRAWH*RVLDFR Trigger: GCGGAAATCTAACACTCGCCAGTGCCAGGCTCTGTG...GTCCTTACTAAAGCTTGATAATGAGGAATGGTGTAGCTGTGGGCCCCACGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
CDS-3UTR CCA 90 bp | GTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCTGTGCCCAGATGGGAGATaGCCTCCAGCTCTTTGTGGG | + |
Preference number: 4 (lower is better) Translates to: VRRQCLWSTSLFWKLLFLCPDGR*PPALCG Trigger: CCCACAAAGAGCTGGAGGCCATCTCCCATCTGGGCA...CAGGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
CDS-3UTR CCA 90 bp | AGGTGGACTTATGAAGATCGGCCAGAGGTGGTGGCAGACACCACAGAGAACTGTTCCGAAGGCCTCTGTTaGTCCTTGGTGTTGAGTGAG | + |
Preference number: 4 (lower is better) Translates to: RWTYEDRPEVVADTTENCSEGLC*SLVLSE Trigger: CTCACTCAACACCAAGGACCAACAGAGGCCTTCGGA...ACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGATCTTCATAAGTCCACCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTGGCAGTCTTTCCGTTTaGCTGGAAGATGTCCCTGGA | + |
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQLGAGSLSV*LEDVPG Trigger: TCCAGGGACATCTTCCAGCCAAACGGAAAGACTGCC...AGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AGAGGCTGCCTACGGGACAGGCTTGCCATAGCTGCTAACACTCATTCTTTCTTCAGAAAGCAGAACTCATaGACCGAAGCAGAGGCCGCC | + |
Preference number: 4 (lower is better) Translates to: RGCLRDRLAIAANTHSFFRKQNS*TEAEAA Trigger: GGCGGCCTCTGCTTCGGTCCATGAGTTCTGCTTTCT...GAAGAAAGAATGAGTGTTAGCAGCTATGGCAAGCCTGTCCCGTAGGCAGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
CDS-3UTR CCA 90 bp | ATTTCTGATCGTGAGAAAAGACTGGAACATAGATGCTTTCTCTCCTACGGCCTGGCCCGACTTAGGGCCTaGCGGATGCCCTGCAACTCC | + |
Preference number: 4 (lower is better) Translates to: ISDREKRLEHRCFLSYGLARLRA*RMPCNS Trigger: GGAGTTGCAGGGCATCCGCCAGGCCCTAAGTCGGGC...CAGGCCGTAGGAGAGAAAGCATCTATGTTCCAGTCTTTTCTCACGATCAGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | CTTCTAAGAATCTCTGACTATAAGGGGTCTCTGCTCTGCATGTCCCAAGCTGCTGGCTGGCTGAGAGGCTaGTCAGGTAGTAGCCACCCT | + |
Preference number: 4 (lower is better) Translates to: LLRISDYKGSLLCMSQAAGWLRG*SGSSHP Trigger: AGGGTGGCTACTACCTGACCAGCCTCTCAGCCAGCC...AGCAGCTTGGGACATGCAGAGCAGAGACCCCTTATAGTCAGAGATTCTTAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
||
CDS-3UTR CCA 90 bp | TCAGATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACGCACAGCCAGGGTCTTaGAGGTGCAACCTGTGCTGG | + |
Preference number: 4 (lower is better) Translates to: SDLVTDGCEPPCGCWDLNAQPGS*RCNLCW Trigger: CCAGCACAGGTTGCACCTCCAAGACCCTGGCTGTGC...GTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | ATCCCTGTGGGCTATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTTGCCTTTTGTTCCTCTaGTCCTATGTGACCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: IPVGYGETEARGLKQRVCCLLFL*SYVTSS Trigger: AGAGGAGGTCACATAGGACCAGAGGAACAAAAGGCA...ACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATAGCCCACAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCT | + |
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSEEQLGA Trigger: AGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CAA 72 bp | GCAGCTTCTCGGGCTGTATGCGCCCTCTTGTGGCTTTaGGTGGGTATTTTTCTCTGCTCAGATTTGCAGTGG | + |
Preference number: 4 (lower is better) Translates to: AASRAVCALLWL*VGIFLCSDLQW Trigger: CCACTGCAAATCTGAGCAGAGAAAAATACCCACCAAAAGCCACAAGAGGGCGCATACAGCCCGAGAAGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | CTGTATGCGCCCTCTTGTGGCTTTTGGTGGGTATTTTTCTCTGCTCAGATTTGCGGCAGTATCCACAGATaGGCTGCACCAGGTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: LYAPSCGFWWVFFSAQICGSIHR*AAPGPG Trigger: TCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCC...GCAAATCTGAGCAGAGAAAAATACCCACCAAAAGCCACAAGAGGGCGCATACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | CAGCCGCACACACAGAGCCTGGCACTGGCGAGTGTTAGATTTCCGCACCAGGAATTTTCTTTCTGTTGGTaGCCAGGTACAAAGTTCAGG | + |
Preference number: 4 (lower is better) Translates to: QPHTQSLALASVRFPHQEFSFCW*PGTKFR Trigger: CCTGAACTTTGTACCTGGGCACCAACAGAAAGAAAA...TTCCTGGTGCGGAAATCTAACACTCGCCAGTGCCAGGCTCTGTGTGTGCGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237762.2 |
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CDS-3UTR GCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTTATCCACAGATGAGCTaGACCAGGTCCTGGAACATG | + |
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQLGAYPQMS*TRSWNM Trigger: CATGTTCCAGGACCTGGTGCAGCTCATCTGTGGATA...AGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | AGAGGCTGCCTACGGGACAGGCTTGCCATAGCTGCTAACACTCATTCTTTCTTCGAACTCATCAGCACCTaGATTCTCTCCTGCCTGGCT | + |
Preference number: 4 (lower is better) Translates to: RGCLRDRLAIAANTHSFFELIST*ILSCLA Trigger: AGCCAGGCAGGAGAGAATGCAGGTGCTGATGAGTTC...GAAGAAAGAATGAGTGTTAGCAGCTATGGCAAGCCTGTCCCGTAGGCAGCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTCTCTGGCCTGATCCTTaGCTTCTTGGTCAACAGCTA | + |
Preference number: 4 (lower is better) Translates to: SWELPNLYCRGAHSYTIPLWPDP*LLGQQL Trigger: TAGCTGTTGACCAAGAAGGCAAGGATCAGGCCAGAG...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | CCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTCTGGCCTGATCCTTaGCTTCTTGGTCAACAGCTA | + |
Preference number: 4 (lower is better) Translates to: PCGCWDLNSGPSEEQLGALWPDP*LLGQQL Trigger: TAGCTGTTGACCAAGAAGGCAAGGATCAGGCCAGAG...AGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCCTTCGATATAGTGGCTaGAGACAAAAGAGGGGCCAC | + |
Preference number: 4 (lower is better) Translates to: TMWLLGFELWTFGRAVGCLRYSG*RQKRGH Trigger: GTGGCCCCTCTTTTGTCTCCAGCCACTATATCGAAG...GCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AGGTGGACTTATGAAGATCGGCCAGAGGTGGTGGCAGACACCACAGAGAACTGTGTCTTTCCGTTTGGCTaGAAGATGTCCCTGGAAGCA | + |
Preference number: 4 (lower is better) Translates to: RWTYEDRPEVVADTTENCVFPFG*KMSLEA Trigger: TGCTTCCAGGGACATCTTCCAGCCAAACGGAAAGAC...ACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGATCTTCATAAGTCCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | ACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCCTGTTCTGTCTCCACTaGGGAAGAAAGAGTCAGGTG | + |
Preference number: 4 (lower is better) Translates to: TMWLLGFELWTFGRAVGCLFCLH*GRKSQV Trigger: CACCTGACTCTTTCTTCCCCAGTGGAGACAGAACAG...GCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TCAGATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACAGCTGCAGCAGCTTCTaGCGCACCTGTTCTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: SDLVTDGCEPPCGCWDLNSCSSF*RTCSVS Trigger: GGAGACAGAACAGGTGCGCCAGAAGCTGCTGCAGCT...GTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR TCA 90 bp | ATTTCTGATCGTGAGAAAAGACTGGAACATAGATGCTTTCTCTCCTACGGCCTGAGGTCCTGCACTAGCTaGCCCACGGCTGTGTATCGG | + |
Preference number: 4 (lower is better) Translates to: ISDREKRLEHRCFLSYGLRSCTS*PTAVYR Trigger: CCGATACACAGCCGTGGGTCAGCTAGTGCAGGACCT...CAGGCCGTAGGAGAGAAAGCATCTATGTTCCAGTCTTTTCTCACGATCAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | CTTCTAAGAATCTCTGACTATAAGGGGTCTCTGCTCTGCATGTCCCAAGCTGCTCCTCTGGCCCCTTGCTaGCTGTCTTTGCCTTTTCTG | + |
Preference number: 4 (lower is better) Translates to: LLRISDYKGSLLCMSQAAPLAPC*LSLPFL Trigger: CAGAAAAGGCAAAGACAGGCAGCAAGGGGCCAGAGG...AGCAGCTTGGGACATGCAGAGCAGAGACCCCTTATAGTCAGAGATTCTTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | CAAAAGAAGCCAGGACTACCCTCCCACCACGCCCCTATGGCTATCAGGAGGATTAGGTGTGTCATACAGTaGGTCTGTAGATGGCTTTTC | + |
Preference number: 4 (lower is better) Translates to: QKKPGLPSHHAPMAIRRIRCVIQ*VCRWLF Trigger: GAAAAGCCATCTACAGACCCACTGTATGACACACCT...AATCCTCCTGATAGCCATAGGGGCGTGGTGGGAGGGTAGTCCTGGCTTCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | CTTCTAAGAATCTCTGACTATAAGGGGTCTCTGCTCTGCATGTCCCAAGCTGCTCCAGCTCTTTGTGGGTaGCTGCCTGATGAATGGCTC | + |
Preference number: 4 (lower is better) Translates to: LLRISDYKGSLLCMSQAAPALCG*LPDEWL Trigger: GAGCCATTCATCAGGCAGCCACCCACAAAGAGCTGG...AGCAGCTTGGGACATGCAGAGCAGAGACCCCTTATAGTCAGAGATTCTTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | CTTCTAAGAATCTCTGACTATAAGGGGTCTCTGCTCTGCATGTCCCAAGCTGCTTCAGGAAGGTCGCACTaGGCCAAAACAAGGCTCAGC | + |
Preference number: 4 (lower is better) Translates to: LLRISDYKGSLLCMSQAASGRSH*AKTRLS Trigger: GCTGAGCCTTGTTTTGGCCCAGTGCGACCTTCCTGA...AGCAGCTTGGGACATGCAGAGCAGAGACCCCTTATAGTCAGAGATTCTTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | ATTTCTGATCGTGAGAAAAGACTGGAACATAGATGCTTTCTCTCCTACGGCCTGGGCAGTGCTCGGGCCTaGCTTAGGCCACTCAACAAG | + |
Preference number: 4 (lower is better) Translates to: ISDREKRLEHRCFLSYGLGSARA*LRPLNK Trigger: CTTGTTGAGTGGCCTAAGCCAGGCCCGAGCACTGCC...CAGGCCGTAGGAGAGAAAGCATCTATGTTCCAGTCTTTTCTCACGATCAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTTGCCTTTTGTTCCTCTaGTCCTATGTGACCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: SWELPNLYCRGAHSYTIPCLLFL*SYVTSS Trigger: AGAGGAGGTCACATAGGACCAGAGGAACAAAAGGCA...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CAA 72 bp | AGTAAGGACCCAAGGAGTGGGGTACGACGGCAATGTTaGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTC | + |
Preference number: 4 (lower is better) Translates to: SKDPRSGVRRQC*WSTSLFWKLLF Trigger: GAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCCCACTCCTTGGGTCCTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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3UTR CAA 72 bp | CCACCCTCCCCACCAGATGTTAGATATCAGATGAACTaGTCCCTTATCACACACTTTTCCCTCCTGCGGAGG | + |
Preference number: 4 (lower is better) Translates to: PPSPPDVRYQMN*SLITHFSLLRR Trigger: CCTCCGCAGGAGGGAAAAGTGTGTGATAAGGGACAAGTTCATCTGATATCTAACATCTGGTGGGGAGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | TGGTCCTTGGTGTTGAGTGAGGAGCTCCAGAACTCCATGCCCAGATGGGAGATGTTTTCTTTCTGTTGGTaGCCAGGTACAAAGTTCAGG | + |
Preference number: 4 (lower is better) Translates to: WSLVLSEELQNSMPRWEMFSFCW*PGTKFR Trigger: CCTGAACTTTGTACCTGGGCACCAACAGAAAGAAAA...CATCTCCCATCTGGGCATGGAGTTCTGGAGCTCCTCACTCAACACCAAGGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224288.2 |
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CDS-3UTR GCA 90 bp | CTGTATGCGCCCTCTTGTGGCTTTTGGTGGGTATTTTTCTCTGCTCAGATTTGCTGTCTTTGCCTTTTCTaGTACAGCCCCCTGGGTCTC | + |
Preference number: 4 (lower is better) Translates to: LYAPSCGFWWVFFSAQICCLCLF*YSPLGL Trigger: GAGACCCAGGGGGCTGTAGCAGAAAAGGCAAAGACA...GCAAATCTGAGCAGAGAAAAATACCCACCAAAAGCCACAAGAGGGCGCATACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AGGTGGACTTATGAAGATCGGCCAGAGGTGGTGGCAGACACCACAGAGAACTGTCAGTGGGTCTGTAGATaGCTTTTCTTTCTGTTGGTG | + |
Preference number: 4 (lower is better) Translates to: RWTYEDRPEVVADTTENCQWVCR*LFFLLV Trigger: CACCAACAGAAAGAAAAGCCATCTACAGACCCACTG...ACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGATCTTCATAAGTCCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AGGTGGACTTATGAAGATCGGCCAGAGGTGGTGGCAGACACCACAGAGAACTGTAGGTGTGTCATACAGTaGGTCTGTAGATGGCTTTTC | + |
Preference number: 4 (lower is better) Translates to: RWTYEDRPEVVADTTENCRCVIQ*VCRWLF Trigger: GAAAAGCCATCTACAGACCCACTGTATGACACACCT...ACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGATCTTCATAAGTCCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AGGTGGACTTATGAAGATCGGCCAGAGGTGGTGGCAGACACCACAGAGAACTGTTTGGTAGCACAGAGTTaGCTCAACGTGGCAATTGAA | + |
Preference number: 4 (lower is better) Translates to: RWTYEDRPEVVADTTENCLVAQS*LNVAIE Trigger: TTCAATTGCCACGTTGAGCCAACTCTGTGCTACCAA...ACAGTTCTCTGTGGTGTCTGCCACCACCTCTGGCCGATCTTCATAAGTCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | AGGAGAAGAATGTCCCTGGTACGGCAGTATCCACAGATGAGCTGCACCAGGTCCCAGTTTTCTTTCTGTTaGTGCCCAGGTACAAAGTTC | + |
Preference number: 4 (lower is better) Translates to: RRRMSLVRQYPQMSCTRSQFSFC*CPGTKF Trigger: GAACTTTGTACCTGGGCACCAACAGAAAGAAAACTG...GGACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAGGGACATTCTTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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CDS-3UTR CCA 90 bp | GCTCTGAGCCCTCCAAAGAGACACCGCCAGTACTCTCTTCGATATAGTGGCTGGCAGTTTTCTTTCTGTTaGTGCCCAGGTACAAAGTTC | + |
Preference number: 4 (lower is better) Translates to: ALSPPKRHRQYSLRYSGWQFSFC*CPGTKF Trigger: GAACTTTGTACCTGGGCACCAACAGAAAGAAAACTG...CCAGCCACTATATCGAAGAGAGTACTGGCGGTGTCTCTTTGGAGGGCTCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237762.2 |
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CDS-3UTR GCA 90 bp | AGAGGCTGCCTACGGGACAGGCTTGCCATAGCTGCTAACACTCATTCTTTCTTCTTTTCTTTCTGTTGGTaGCCAGGTACAAAGTTCAGG | + |
Preference number: 4 (lower is better) Translates to: RGCLRDRLAIAANTHSFFFSFCW*PGTKFR Trigger: CCTGAACTTTGTACCTGGGCACCAACAGAAAGAAAA...GAAGAAAGAATGAGTGTTAGCAGCTATGGCAAGCCTGTCCCGTAGGCAGCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | ATTTCTGATCGTGAGAAAAGACTGGAACATAGATGCTTTCTCTCCTACGGCCTGTCCGAAGGCCTCTGTTaGTCCTTGGTGTTGAGTGAG | + |
Preference number: 4 (lower is better) Translates to: ISDREKRLEHRCFLSYGLSEGLC*SLVLSE Trigger: CTCACTCAACACCAAGGACCAACAGAGGCCTTCGGA...CAGGCCGTAGGAGAGAAAGCATCTATGTTCCAGTCTTTTCTCACGATCAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CCA 90 bp | ATTTCTGATCGTGAGAAAAGACTGGAACATAGATGCTTTCTCTCCTACGGCCTGGGCAGTCTTTCCGTTTaGCTGGAAGATGTCCCTGGA | + |
Preference number: 4 (lower is better) Translates to: ISDREKRLEHRCFLSYGLGSLSV*LEDVPG Trigger: TCCAGGGACATCTTCCAGCCAAACGGAAAGACTGCC...CAGGCCGTAGGAGAGAAAGCATCTATGTTCCAGTCTTTTCTCACGATCAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR GCA 90 bp | CTGTATGCGCCCTCTTGTGGCTTTTGGTGGGTATTTTTCTCTGCTCAGATTTGCTTTTCTTTCTGTTGGTaGCCAGGTACAAAGTTCAGG | + |
Preference number: 4 (lower is better) Translates to: LYAPSCGFWWVFFSAQICFSFCW*PGTKFR Trigger: CCTGAACTTTGTACCTGGGCACCAACAGAAAGAAAA...GCAAATCTGAGCAGAGAAAAATACCCACCAAAAGCCACAAGAGGGCGCATACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 90 bp | GGGCCCAGCTCTGCGCTCAGCATGGCCCGGGCCCGACTTAGGGCCTaGCGGATGCCCTGCAACTCCCGGGGCTCGGGACCAGCCCGAACC | + |
Preference number: 5 (lower is better) Translates to: GPSSALSMARARLRA*RMPCNSRGSGPART Trigger: GGTTCGGGCTGGTCCCGAGCCCCGGGAGTTGCAGGGCATCCGCCAGGCCCTAAGTCGGGCCCGGGCCATGCTGAGCGCAGAGCTGGGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 90 bp | GCGCTCAGCATGGCCCGGGCCCGACTTAGGGCCTGGCGGATGCCCTaGAACTCCCGGGGCTCGGGACCAGCCCGAACCTGGGTCAGTAGG | + |
Preference number: 5 (lower is better) Translates to: ALSMARARLRAWRMP*NSRGSGPARTWVSR Trigger: CCTACTGACCCAGGTTCGGGCTGGTCCCGAGCCCCGGGAGTTGCAGGGCATCCGCCAGGCCCTAAGTCGGGCCCGGGCCATGCTGAGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 90 bp | GCTCTGCGCTCAGCATGGCCCGGGCCCGACTTAGGGCCTGGCGGATaGCCTGCAACTCCCGGGGCTCGGGACCAGCCCGAACCTGGGTCA | + |
Preference number: 5 (lower is better) Translates to: ALRSAWPGPDLGPGG*PATPGARDQPEPGS Trigger: TGACCCAGGTTCGGGCTGGTCCCGAGCCCCGGGAGTTGCAGGGCATCCGCCAGGCCCTAAGTCGGGCCCGGGCCATGCTGAGCGCAGAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 90 bp | GCTCTGGTGGTAGCAGCTTCTCAGGGCCCAGCTCTGCGCTCAGCATaGCCCGGGCCCGACTTAGGGCCTGGCGGATGCCCTGCAACTCCC | + |
Preference number: 5 (lower is better) Translates to: ALVVAASQGPALRSA*PGPDLGPGGCPATP Trigger: GGGAGTTGCAGGGCATCCGCCAGGCCCTAAGTCGGGCCCGGGCCATGCTGAGCGCAGAGCTGGGCCCTGAGAAGCTGCTACCACCAGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS TCA 90 bp | GCTGTTCCCAGAGGGCCAGGGAGCGCTGGAGCTCCTGTGCTGGGCTaGGTGGCAGTGCTCGGGCCTGGCTTAGGCCACTCAACAAGGCCA | + |
Preference number: 5 (lower is better) Translates to: AVPRGPGSAGAPVLG*VAVLGPGLGHSTRP Trigger: TGGCCTTGTTGAGTGGCCTAAGCCAGGCCCGAGCACTGCCACTCAGCCCAGCACAGGAGCTCCAGCGCTCCCTGGCCCTCTGGGAACAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025818.8 ENSMUST00000224032.2 ENSMUST00000225427.2 |
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CDS TCA 90 bp | CTGCTACAGCCCCCTGGGTCTCAGGGCGCTCTGCCCGGCGATAGATaGGGTAGCCAGTTGCAGGAAGCCTGTGGGCTAGGGCTTCAGGGG | + |
Preference number: 5 (lower is better) Translates to: LLQPPGSQGALPGDR*GSQLQEACGLGLQG Trigger: CCCCTGAAGCCCTAGCCCACAGGCTTCCTGCAACTGGCTACCTCATCTATCGCCGGGCAGAGCGCCCTGAGACCCAGGGGGCTGTAGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 90 bp | CACAGGCCGGGTGATCAGCAGCCGCTCCCGAAGGCTCACAGTACGTaGTGGCTGTTGGGACCCGCCTGCCTGTACCCCTCTGGTATCAGG | + |
Preference number: 5 (lower is better) Translates to: HRPGDQQPLPKAHST*WLLGPACLYPSGIR Trigger: CCTGATACCAGAGGGGTACAGGCAGGCGGGTCCCAACAGCCAGCACGTACTGTGAGCCTTCGGGAGCGGCTGCTGATCACCCGGCCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 90 bp | TTCTGGCGCACCTGTTCTGTCTCCACTGGGGAAGAAAGAGTCAGGTaGGACCCGAAGGCTCCAGGCCCCTGGGTCCGGGCCAGGCGGAAG | + |
Preference number: 5 (lower is better) Translates to: FWRTCSVSTGEERVR*DPKAPGPWVRARRK Trigger: CTTCCGCCTGGCCCGGACCCAGGGGCCTGGAGCCTTCGGGTCCCACCTGACTCTTTCTTCCCCAGTGGAGACAGAACAGGTGCGCCAGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 90 bp | AGGCCGGGTGATCAGCAGCCGCTCCCGAAGGCTCACAGTACGTGCTaGCTGTTGGGACCCGCCTGCCTGTACCCCTCTGGTATCAGGTGT | + |
Preference number: 5 (lower is better) Translates to: RPGDQQPLPKAHSTC*LLGPACLYPSGIRC Trigger: ACACCTGATACCAGAGGGGTACAGGCAGGCGGGTCCCAACAGCCAGCACGTACTGTGAGCCTTCGGGAGCGGCTGCTGATCACCCGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 90 bp | CAGCTGTCGAGGGGGCAGTCTTTCCGTTTGGCTGGAAGATGTCCCTaGAAGCACCGGGACTGGGGGAGGCGGCACAGCAGGTGGAGACAG | + |
Preference number: 5 (lower is better) Translates to: QLSRGQSFRLAGRCP*KHRDWGRRHSRWRQ Trigger: CTGTCTCCACCTGCTGTGCCGCCTCCCCCAGTCCCGGTGCTTCCAGGGACATCTTCCAGCCAAACGGAAAGACTGCCCCCTCGACAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 90 bp | TCTCCCTCTGCAGCAGCTGTCGAGGGGGCAGTCTTTCCGTTTGGCTaGAAGATGTCCCTGGAAGCACCGGGACTGGGGGAGGCGGCACAG | + |
Preference number: 5 (lower is better) Translates to: SPSAAAVEGAVFPFG*KMSLEAPGLGEAAQ Trigger: CTGTGCCGCCTCCCCCAGTCCCGGTGCTTCCAGGGACATCTTCCAGCCAAACGGAAAGACTGCCCCCTCGACAGCTGCTGCAGAGGGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 90 bp | AAGACCCTGGGGGCACAGCCAGGGTCTTGGAGGTGCAACCTGTGCTaGGGTCCTGGTAGGCTACTCGGAGGAGATGCTGGAAGCTGTGGG | + |
Preference number: 5 (lower is better) Translates to: KTLGAQPGSWRCNLC*GPGRLLGGDAGSCG Trigger: CCCACAGCTTCCAGCATCTCCTCCGAGTAGCCTACCAGGACCCCAGCACAGGTTGCACCTCCAAGACCCTGGCTGTGCCCCCAGGGTCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 90 bp | ACGAAGGAGCTGCAGCAGCTTCTGGCGCACCTGTTCTGTCTCCACTaGGGAAGAAAGAGTCAGGTGGGACCCGAAGGCTCCAGGCCCCTG | + |
Preference number: 5 (lower is better) Translates to: TKELQQLLAHLFCLH*GRKSQVGPEGSRPL Trigger: CAGGGGCCTGGAGCCTTCGGGTCCCACCTGACTCTTTCTTCCCCAGTGGAGACAGAACAGGTGCGCCAGAAGCTGCTGCAGCTCCTTCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025818.8 ENSMUST00000224032.2 ENSMUST00000225427.2 |
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CDS CCA 90 bp | GGCTCAACGTGGCAATTGAAGACCCTGGGGGCACAGCCAGGGTCTTaGAGGTGCAACCTGTGCTGGGGTCCTGGTAGGCTACTCGGAGGA | + |
Preference number: 5 (lower is better) Translates to: GSTWQLKTLGAQPGS*RCNLCWGPGRLLGG Trigger: TCCTCCGAGTAGCCTACCAGGACCCCAGCACAGGTTGCACCTCCAAGACCCTGGCTGTGCCCCCAGGGTCTTCAATTGCCACGTTGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | AGGCCCAGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACAGCCTGCAGGAGCCACTaGACCTGGGCACTAGGTGAG | + |
Preference number: 5 (lower is better) Translates to: RPRRAALSLAVVLLCPETACRSH*TWALGE Trigger: CTCACCTAGTGCCCAGGTCAAGTGGCTCCTGCAGGC...TGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCTGGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 90 bp | CCGCTCCCGAAGGCTCACAGTACGTGCTGGCTGTTGGGACCCGCCTaGCTGTACCCCTCTGGTATCAGGTGTGTCATACAGTGGGTCTGT | + |
Preference number: 5 (lower is better) Translates to: PLPKAHSTCWLLGPA*LYPSGIRCVIQWVC Trigger: ACAGACCCACTGTATGACACACCTGATACCAGAGGGGTACAGGCAGGCGGGTCCCAACAGCCAGCACGTACTGTGAGCCTTCGGGAGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 90 bp | AGAGAGCAGAAAGCAGAACTCATGGACCGAAGCAGAGGCCGCCGGTaGCTTGGGCGGCTTAGGCGTGGGGAGGTTGTAGGGCTTCCTGAA | + |
Preference number: 5 (lower is better) Translates to: REQKAELMDRSRGRR*LGRLRRGEVVGLPE Trigger: TTCAGGAAGCCCTACAACCTCCCCACGCCTAAGCCGCCCAAGGCACCGGCGGCCTCTGCTTCGGTCCATGAGTTCTGCTTTCTGCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 90 bp | TTGAAGACCCTGGGGGCACAGCCAGGGTCTTGGAGGTGCAACCTGTaGTGGGGTCCTGGTAGGCTACTCGGAGGAGATGCTGGAAGCTGT | + |
Preference number: 5 (lower is better) Translates to: LKTLGAQPGSWRCNL*WGPGRLLGGDAGSC Trigger: ACAGCTTCCAGCATCTCCTCCGAGTAGCCTACCAGGACCCCAGCACAGGTTGCACCTCCAAGACCCTGGCTGTGCCCCCAGGGTCTTCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 90 bp | ACGTGGCAATTGAAGACCCTGGGGGCACAGCCAGGGTCTTGGAGGTaGAACCTGTGCTGGGGTCCTGGTAGGCTACTCGGAGGAGATGCT | + |
Preference number: 5 (lower is better) Translates to: TWQLKTLGAQPGSWR*NLCWGPGRLLGGDA Trigger: AGCATCTCCTCCGAGTAGCCTACCAGGACCCCAGCACAGGTTGCACCTCCAAGACCCTGGCTGTGCCCCCAGGGTCTTCAATTGCCACGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 90 bp | TGTCTTTGCCTTTTCTGCTACAGCCCCCTGGGTCTCAGGGCGCTCTaGCCGGCGATAGATGAGGTAGCCAGTTGCAGGAAGCCTGTGGGC | + |
Preference number: 5 (lower is better) Translates to: CLCLFCYSPLGLRAL*PAIDEVASCRKPVG Trigger: GCCCACAGGCTTCCTGCAACTGGCTACCTCATCTATCGCCGGGCAGAGCGCCCTGAGACCCAGGGGGCTGTAGCAGAAAAGGCAAAGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 90 bp | GTGATCAGCAGCCGCTCCCGAAGGCTCACAGTACGTGCTGGCTGTTaGGACCCGCCTGCCTGTACCCCTCTGGTATCAGGTGTGTCATAC | + |
Preference number: 5 (lower is better) Translates to: VISSRSRRLTVRAGC*DPPACTPLVSGVSY Trigger: GTATGACACACCTGATACCAGAGGGGTACAGGCAGGCGGGTCCCAACAGCCAGCACGTACTGTGAGCCTTCGGGAGCGGCTGCTGATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 90 bp | GGTGACGTCAGAGTCCCTCTGAGCATGGTCAATAGGGGAAAGATGTaGGGACCGGCTCTTTACCTGGAAGCTGTGGGTGGCCGGCAGGCG | + |
Preference number: 5 (lower is better) Translates to: GDVRVPLSMVNRGKM*GPALYLEAVGGRQA Trigger: CGCCTGCCGGCCACCCACAGCTTCCAGGTAAAGAGCCGGTCCCCACATCTTTCCCCTATTGACCATGCTCAGAGGGACTCTGACGTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224032.2 |
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CDS-3UTR CAA 90 bp | AGGCCCAGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACAGCTGTGTATAGCAGCTaGCAGGCCTGCAGGAGCCAC | + |
Preference number: 5 (lower is better) Translates to: RPRRAALSLAVVLLCPETAVYSS*QACRSH Trigger: GTGGCTCCTGCAGGCCTGCAAGCTGCTATACACAGC...TGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCTGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS TCA 90 bp | AGGAAGACAAGGGCTGGCAGCACTTCCTGGCACACGATATCCCACTaGGCTCTCCCTCTGCAGCAGCTGTCGAGGGGGCAGTCTTTCCGT | + |
Preference number: 5 (lower is better) Translates to: RKTRAGSTSWHTISH*ALPLQQLSRGQSFR Trigger: ACGGAAAGACTGCCCCCTCGACAGCTGCTGCAGAGGGAGAGCTCAGTGGGATATCGTGTGCCAGGAAGTGCTGCCAGCCCTTGTCTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS TCA 90 bp | GGCTCGGGACCAGCCCGAACCTGGGTCAGTAGGTCCTGCACTAGCTaGCCCACGGCTGTGTATCGGTTTTGCATTAGCATTGTGGCTGCC | + |
Preference number: 5 (lower is better) Translates to: GSGPARTWVSRSCTS*PTAVYRFCISIVAA Trigger: GGCAGCCACAATGCTAATGCAAAACCGATACACAGCCGTGGGTCAGCTAGTGCAGGACCTACTGACCCAGGTTCGGGCTGGTCCCGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 90 bp | AGGCGGGCAGCCAGAATGGGTCGAAGAGGCTTGAGAACAGAGCGATaGAGGGACTTCTCCAGGACCAATTCCAGCCGCTCTGGTGGTAGC | + |
Preference number: 5 (lower is better) Translates to: RRAARMGRRGLRTER*RDFSRTNSSRSGGS Trigger: GCTACCACCAGAGCGGCTGGAATTGGTCCTGGAGAAGTCCCTGCATCGCTCTGTTCTCAAGCCTCTTCGACCCATTCTGGCTGCCCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | TATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTGAGTCTCCCAGCGCCTGCAGGAGCCACTaGACCTGGGCACTAGGTGAG | + |
Preference number: 5 (lower is better) Translates to: YGETEARGLKQRVCESPSACRSH*TWALGE Trigger: CTCACCTAGTGCCCAGGTCAAGTGGCTCCTGCAGGC...GCTGGGAGACTCACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 90 bp | CTGGCAGCACTTCCTGGCACACGATATCCCACTGAGCTCTCCCTCTaGAGCAGCTGTCGAGGGGGCAGTCTTTCCGTTTGGCTGGAAGAT | + |
Preference number: 5 (lower is better) Translates to: LAALPGTRYPTELSL*SSCRGGSLSVWLED Trigger: ATCTTCCAGCCAAACGGAAAGACTGCCCCCTCGACAGCTGCTGCAGAGGGAGAGCTCAGTGGGATATCGTGTGCCAGGAAGTGCTGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | ATCCCTGTGGGCTATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTCCTGCCTCTGGCCCCTaGCTGCCTGTCTTTGCCTTT | + |
Preference number: 5 (lower is better) Translates to: IPVGYGETEARGLKQRVCPASGP*LPVFAF Trigger: AAAGGCAAAGACAGGCAGCAAGGGGCCAGAGGCAGG...ACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATAGCCCACAGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS TCA 90 bp | GGTCACTCGGAACTTGGTAGCACAGAGTTGGCTCAACGTGGCAATTaGAGACCCTGGGGGCACAGCCAGGGTCTTGGAGGTGCAACCTGT | + |
Preference number: 5 (lower is better) Translates to: GHSELGSTELAQRGN*RPWGHSQGLGGATC Trigger: ACAGGTTGCACCTCCAAGACCCTGGCTGTGCCCCCAGGGTCTTCAATTGCCACGTTGAGCCAACTCTGTGCTACCAAGTTCCGAGTGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 90 bp | CTCCATGCCCAGATGGGAGATGGCCTCCAGCTCTTTGTGGGTGGCTaGCTGATGAATGGCTCTGGTACGGCAGTATCCACAGATGAGCTG | + |
Preference number: 5 (lower is better) Translates to: LHAQMGDGLQLFVGG*LMNGSGTAVSTDEL Trigger: CAGCTCATCTGTGGATACTGCCGTACCAGAGCCATTCATCAGGCAGCCACCCACAAAGAGCTGGAGGCCATCTCCCATCTGGGCATGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000225427.2 ENSMUST00000225799.3 |
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CDS CCA 90 bp | CCAAACGCATCTGGTTGGGTCACTCGGAACTTGGTAGCACAGAGTTaGCTCAACGTGGCAATTGAAGACCCTGGGGGCACAGCCAGGGTC | + |
Preference number: 5 (lower is better) Translates to: PNASGWVTRNLVAQS*LNVAIEDPGGTARV Trigger: GACCCTGGCTGTGCCCCCAGGGTCTTCAATTGCCACGTTGAGCCAACTCTGTGCTACCAAGTTCCGAGTGACCCAACCAGATGCGTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | GGAGTTGCACAGGGTCTTGATGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGCCTTGCTGCCTGTCTTaGCCTTTTCTGCTACAGCCC | + |
Preference number: 5 (lower is better) Translates to: GVAQGLDAPASLHGQWERPCCLS*PFLLQP Trigger: GGGCTGTAGCAGAAAAGGCAAAGACAGGCAGCAAGG...CCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAGACCCTGTGCAACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | GACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACTGAGCCATCTCACCAGCCCCCCTTGCTGCCTGTCTTaGCCTTTTCTGCTACAGCCC | + |
Preference number: 5 (lower is better) Translates to: DLRKSSWVLLPLSHLTSPPCCLS*PFLLQP Trigger: GGGCTGTAGCAGAAAAGGCAAAGACAGGCAGCAAGG...GGGGCTGGTGAGATGGCTCAGTGGTAAGAGCACCCAACTGCTCTTCCGAAGGTC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | AGGCCCAGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACACTGATCCTTGCCTTCTaGGTCAACAGCTATCCGAGG | + |
Preference number: 5 (lower is better) Translates to: RPRRAALSLAVVLLCPETLILAF*VNSYPR Trigger: CCTCGGATAGCTGTTGACCAAGAAGGCAAGGATCAG...TGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCTGGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | AAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCCGGGGGCCCAGGTGCTTCCTTCTGCCTTTaGTTCCTCTGGTCCTATGTG | + |
Preference number: 5 (lower is better) Translates to: KEAWQLGRVDLEAPGGPGASFCL*FLWSYV Trigger: CACATAGGACCAGAGGAACAAAAGGCAGAAGGAAGC...ACCTGGGCCCCCGGGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 90 bp | GCTGTGTATCGGTTTTGCATTAGCATTGTGGCTGCCCGGCCCACCTaGCTCTCTGGTGCCAGCAGAGAGCAGAAAGCAGAACTCATGGAC | + |
Preference number: 5 (lower is better) Translates to: AVYRFCISIVAARPT*LSGASREQKAELMD Trigger: GTCCATGAGTTCTGCTTTCTGCTCTCTGCTGGCACCAGAGAGGCAGGTGGGCCGGGCAGCCACAATGCTAATGCAAAACCGATACACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | TATGGGGAGACAGAAGCCAGGGGCCTTAAACAGAGGGTCTGTGAGTCTCCCAGCGGTACAAAGTTCAGGTaGGTGGCTCCCAGAGGGTGT | + |
Preference number: 5 (lower is better) Translates to: YGETEARGLKQRVCESPSGTKFR*VAPRGC Trigger: ACACCCTCTGGGAGCCACCAACCTGAACTTTGTACC...GCTGGGAGACTCACAGACCCTCTGTTTAAGGCCCCTGGCTTCTGTCTCCCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | GTCCCTGGTACGGCAGTATCCACAGATGAGCTGCACCAGGTCCTGGAACATGAGGGTACAAAGTTCAGGTaGGTGGCTCCCAGAGGGTGT | + |
Preference number: 5 (lower is better) Translates to: VPGTAVSTDELHQVLEHEGTKFR*VAPRGC Trigger: ACACCCTCTGGGAGCCACCAACCTGAACTTTGTACC...CTCATGTTCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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CDS-3UTR CAA 90 bp | TGGGTGGGTGGTAAAGGAAGCTTGGCAGCTGGGAAGAGTGGACTTAGAGGCTCCTTGAATTTCTCTCGTTaGGTGGGGCCCAGATCCCCG | + |
Preference number: 5 (lower is better) Translates to: WVGGKGSLAAGKSGLRGSLNFSR*VGPRSP Trigger: CGGGGATCTGGGCCCCACCAAACGAGAGAAATTCAA...GGAGCCTCTAAGTCCACTCTTCCCAGCTGCCAAGCTTCCTTTACCACCCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 90 bp | GCGATGGTAGCCCTGGTCCTTGTAGAGGAAGAGGCCAAACGCATCTaGTTGGGTCACTCGGAACTTGGTAGCACAGAGTTGGCTCAACGT | + |
Preference number: 5 (lower is better) Translates to: AMVALVLVEEEAKRI*LGHSELGSTELAQR Trigger: ACGTTGAGCCAACTCTGTGCTACCAAGTTCCGAGTGACCCAACCAGATGCGTTTGGCCTCTTCCTCTACAAGGACCAGGGCTACCATCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | CTTGATGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGCAAAAGAAGCCAGGATTGAATTTCTCTCGTTaGGTGGGGCCCAGATCCCCG | + |
Preference number: 5 (lower is better) Translates to: LDAPASLHGQWERQKKPGLNFSR*VGPRSP Trigger: CGGGGATCTGGGCCCCACCAAACGAGAGAAATTCAA...TCCTGGCTTCTTTTGCCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | CTTGATGCTCCAGCATCTCTCCATGGGCAGTGGGAGAGGCAAAAGAAGCCAGGATGGGTCACTCGGAACTaGGTAGCACAGAGTTGGCTC | + |
Preference number: 5 (lower is better) Translates to: LDAPASLHGQWERQKKPGWVTRN*VAQSWL Trigger: GAGCCAACTCTGTGCTACCAAGTTCCGAGTGACCCA...TCCTGGCTTCTTTTGCCTCTCCCACTGCCCATGGAGAGATGCTGGAGCATCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | CAAAAGAAGCCAGGACTACCCTCCCACCACGCCCCTATGGCTATCAGGAGGATTGCCAAACGCATCTGGTaGGGTCACTCGGAACTTGGT | + |
Preference number: 5 (lower is better) Translates to: QKKPGLPSHHAPMAIRRIAKRIW*GHSELG Trigger: ACCAAGTTCCGAGTGACCCAACCAGATGCGTTTGGC...AATCCTCCTGATAGCCATAGGGGCGTGGTGGGAGGGTAGTCCTGGCTTCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | CTGCCGTGGGGCCCACAGCTACACCATTCCTCATTATCAAGCTTTAGTAAGGACCCTGCCTCTGGCCCCTaGCTGCCTGTCTTTGCCTTT | + |
Preference number: 5 (lower is better) Translates to: LPWGPQLHHSSLSSFSKDPASGP*LPVFAF Trigger: AAAGGCAAAGACAGGCAGCAAGGGGCCAGAGGCAGG...GTCCTTACTAAAGCTTGATAATGAGGAATGGTGTAGCTGTGGGCCCCACGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS TCA 90 bp | GATGCAAGGCTAGTGAAACTGTGCTGGGTGACGTCAGAGTCCCTCTaGGCATGGTCAATAGGGGAAAGATGTGGGGACCGGCTCTTTACC | + |
Preference number: 5 (lower is better) Translates to: DARLVKLCWVTSESL*AWSIGERCGDRLFT Trigger: GGTAAAGAGCCGGTCCCCACATCTTTCCCCTATTGACCATGCTCAGAGGGACTCTGACGTCACCCAGCACAGTTTCACTAGCCTTGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224032.2 |
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CDS-3UTR CAA 90 bp | AAGAATGTCCCTGGTACGGCAGTATCCACAGATGAGCTGCACCAGGTCCTGGAAGGTACAAAGTTCAGGTaGGTGGCTCCCAGAGGGTGT | + |
Preference number: 5 (lower is better) Translates to: KNVPGTAVSTDELHQVLEGTKFR*VAPRGC Trigger: ACACCCTCTGGGAGCCACCAACCTGAACTTTGTACC...TTCCAGGACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAGGGACATTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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CDS-3UTR CAA 90 bp | GGGTACGACGGCAATGTTTGTGGAGCACCTCTCTGTTCTGGAAACTTCTCTTCCGGTTTTGCATTAGCATaGTGGCTGCCCGGCCCACCT | + |
Preference number: 5 (lower is better) Translates to: GYDGNVCGAPLCSGNFSSGFALA*WLPGPP Trigger: AGGTGGGCCGGGCAGCCACAATGCTAATGCAAAACC...GGAAGAGAAGTTTCCAGAACAGAGAGGTGCTCCACAAACATTGCCGTCGTACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 90 bp | TCTGACATATACTCAGCTTCTAACAGGAGGTCAGGAAGGTCGCACTaGGCCAAAACAAGGCTCAGCAGAGGCAGGAACTCATCAGCACCT | + |
Preference number: 5 (lower is better) Translates to: SDIYSASNRRSGRSH*AKTRLSRGRNSSAP Trigger: AGGTGCTGATGAGTTCCTGCCTCTGCTGAGCCTTGTTTTGGCCCAGTGCGACCTTCCTGACCTCCTGTTAGAAGCTGAGTATATGTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025818.8 ENSMUST00000224032.2 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | AGGAGAGCAGCTCTGAGCCTGGCTGTGGTCCTCCTTTGTCCGGAAACAATCCTCGTGGACACTCGCACTTaGAAACTCCTCTTGAATTTC | + |
Preference number: 5 (lower is better) Translates to: RRAALSLAVVLLCPETILVDTRT*KLLLNF Trigger: GAAATTCAAGAGGAGTTTCAAAGTGCGAGTGTCCAC...GAGGATTGTTTCCGGACAAAGGAGGACCACAGCCAGGCTCAGAGCTGCTCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | GGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCGCTTCCTTCTGCCTTTaGTTCCTCTGGTCCTATGTG | + |
Preference number: 5 (lower is better) Translates to: GCWDLNSGPSEEQLGALTASFCL*FLWSYV Trigger: CACATAGGACCAGAGGAACAAAAGGCAGAAGGAAGC...GGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | ATTTCTGATCGTGAGAAAAGACTGGAACATAGATGCTTTCTCTCCTACGGCCTGGCTGTGTATAGCAGCTaGCAGGCCTGCAGGAGCCAC | + |
Preference number: 5 (lower is better) Translates to: ISDREKRLEHRCFLSYGLAVYSS*QACRSH Trigger: GTGGCTCCTGCAGGCCTGCAAGCTGCTATACACAGC...CAGGCCGTAGGAGAGAAAGCATCTATGTTCCAGTCTTTTCTCACGATCAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | CTTCTAAGAATCTCTGACTATAAGGGGTCTCTGCTCTGCATGTCCCAAGCTGCTTGGGTCACTCGGAACTaGGTAGCACAGAGTTGGCTC | + |
Preference number: 5 (lower is better) Translates to: LLRISDYKGSLLCMSQAAWVTRN*VAQSWL Trigger: GAGCCAACTCTGTGCTACCAAGTTCCGAGTGACCCA...AGCAGCTTGGGACATGCAGAGCAGAGACCCCTTATAGTCAGAGATTCTTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | TCAGATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACGCCAAACGCATCTGGTaGGGTCACTCGGAACTTGGT | + |
Preference number: 5 (lower is better) Translates to: SDLVTDGCEPPCGCWDLNAKRIW*GHSELG Trigger: ACCAAGTTCCGAGTGACCCAACCAGATGCGTTTGGC...GTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | GAGGAGAAGAATGTCCCTGGTACGGCAGTATCCACAGATGAGCTGCACCAGGTCGCAGTTTTCTTTCTGTaGGTGCCCAGGTACAAAGTT | + |
Preference number: 5 (lower is better) Translates to: EEKNVPGTAVSTDELHQVAVFFL*VPRYKV Trigger: AACTTTGTACCTGGGCACCAACAGAAAGAAAACTGC...GACCTGGTGCAGCTCATCTGTGGATACTGCCGTACCAGGGACATTCTTCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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CDS-3UTR CAA 90 bp | GCTCTGAGCCCTCCAAAGAGACACCGCCAGTACTCTCTTCGATATAGTGGCTGGGCAGTTTTCTTTCTGTaGGTGCCCAGGTACAAAGTT | + |
Preference number: 5 (lower is better) Translates to: ALSPPKRHRQYSLRYSGWAVFFL*VPRYKV Trigger: AACTTTGTACCTGGGCACCAACAGAAAGAAAACTGC...CCAGCCACTATATCGAAGAGAGTACTGGCGGTGTCTCTTTGGAGGGCTCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237762.2 |
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CDS GCA 90 bp | CCTTTTGTTCCTCTGGTCCTATGTGACCTCCTCTGGCCTGATCCTTaGCTTCTTGGTCAACAGCTATCCGAGGTTTCCCTTCTCTGTTTA | + |
Preference number: 5 (lower is better) Translates to: PFVPLVLCDLLWPDP*LLGQQLSEVSLLCL Trigger: TAAACAGAGAAGGGAAACCTCGGATAGCTGTTGACCAAGAAGGCAAGGATCAGGCCAGAGGAGGTCACATAGGACCAGAGGAACAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | TCTTGGGAATTACCTAACCTGTACTGCCGTGGGGCCCACAGCTACACCATTCCTTGGCTTTTCTTTCTGTaGGTGCCCAGGTACAAAGTT | + |
Preference number: 5 (lower is better) Translates to: SWELPNLYCRGAHSYTIPWLFFL*VPRYKV Trigger: AACTTTGTACCTGGGCACCAACAGAAAGAAAAGCCA...AGGAATGGTGTAGCTGTGGGCCCCACGGCAGTACAGGTTAGGTAATTCCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | CTGTATGCGCCCTCTTGTGGCTTTTGGTGGGTATTTTTCTCTGCTCAGATTTGCCTGATCCTTGCCTTCTaGGTCAACAGCTATCCGAGG | + |
Preference number: 5 (lower is better) Translates to: LYAPSCGFWWVFFSAQICLILAF*VNSYPR Trigger: CCTCGGATAGCTGTTGACCAAGAAGGCAAGGATCAG...GCAAATCTGAGCAGAGAAAAATACCCACCAAAAGCCACAAGAGGGCGCATACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | GGTTGCTGGGATTTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCACTTTGAAACTCCTCTaGAATTTCTCTCGTTTGGTG | + |
Preference number: 5 (lower is better) Translates to: GCWDLNSGPSEEQLGALTTLKLL*NFSRLV Trigger: CACCAAACGAGAGAAATTCAAGAGGAGTTTCAAAGT...GGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | CTGTATGCGCCCTCTTGTGGCTTTTGGTGGGTATTTTTCTCTGCTCAGATTTGCTGGCTTTTCTTTCTGTaGGTGCCCAGGTACAAAGTT | + |
Preference number: 5 (lower is better) Translates to: LYAPSCGFWWVFFSAQICWLFFL*VPRYKV Trigger: AACTTTGTACCTGGGCACCAACAGAAAGAAAAGCCA...GCAAATCTGAGCAGAGAAAAATACCCACCAAAAGCCACAAGAGGGCGCATACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS-3UTR CAA 90 bp | AGAGGCTGCCTACGGGACAGGCTTGCCATAGCTGCTAACACTCATTCTTTCTTCACTTTGAAACTCCTCTaGAATTTCTCTCGTTTGGTG | + |
Preference number: 5 (lower is better) Translates to: RGCLRDRLAIAANTHSFFTLKLL*NFSRLV Trigger: CACCAAACGAGAGAAATTCAAGAGGAGTTTCAAAGT...GAAGAAAGAATGAGTGTTAGCAGCTATGGCAAGCCTGTCCCGTAGGCAGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 72 bp | ATGGCCCGGGCCCGACTTAGGGCCTGGCGGATGCCCTaGAACTCCCGGGGCTCGGGACCAGCCCGAACCTGG | + |
Preference number: 6 (lower is better) Translates to: MARARLRAWRMP*NSRGSGPARTW Trigger: CCAGGTTCGGGCTGGTCCCGAGCCCCGGGAGTTGCAGGGCATCCGCCAGGCCCTAAGTCGGGCCCGGGCCAT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | TCTGCGCTCAGCATGGCCCGGGCCCGACTTAGGGCCTaGCGGATGCCCTGCAACTCCCGGGGCTCGGGACCA | + |
Preference number: 6 (lower is better) Translates to: SALSMARARLRA*RMPCNSRGSGP Trigger: TGGTCCCGAGCCCCGGGAGTTGCAGGGCATCCGCCAGGCCCTAAGTCGGGCCCGGGCCATGCTGAGCGCAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | GGTAGGCTACTCGGAGGAGATGCTGGAAGCTGTGGGTaGCCGGCAGGCGGCGCTGTTCCCAGAGGGCCAGGG | + |
Preference number: 6 (lower is better) Translates to: GRLLGGDAGSCG*PAGGAVPRGPG Trigger: CCCTGGCCCTCTGGGAACAGCGCCGCCTGCCGGCCACCCACAGCTTCCAGCATCTCCTCCGAGTAGCCTACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | GATGTGGGGACCGGCTCTTTACCTGGAAGCTGTGGGTaGCCGGCAGGCGGCGCTGTTCCCAGAGGGCCAGGG | + |
Preference number: 6 (lower is better) Translates to: DVGTGSLPGSCG*PAGGAVPRGPG Trigger: CCCTGGCCCTCTGGGAACAGCGCCGCCTGCCGGCCACCCACAGCTTCCAGGTAAAGAGCCGGTCCCCACATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224032.2 |
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CDS CAA 72 bp | GGCTCTGTCCTCAGCACGTGCAGCGCGGCTGCAGCGTaGGCCCGCAGCTGTAACCACACAGGCCGGGTGATC | + |
Preference number: 6 (lower is better) Translates to: GSVLSTCSAAAA*ARSCNHTGRVI Trigger: GATCACCCGGCCTGTGTGGTTACAGCTGCGGGCCAACGCTGCAGCCGCGCTGCACGTGCTGAGGACAGAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS TCA 72 bp | CCCCCTGGGTCTCAGGGCGCTCTGCCCGGCGATAGATaGGGTAGCCAGTTGCAGGAAGCCTGTGGGCTAGGG | + |
Preference number: 6 (lower is better) Translates to: PPGSQGALPGDR*GSQLQEACGLG Trigger: CCCTAGCCCACAGGCTTCCTGCAACTGGCTACCTCATCTATCGCCGGGCAGAGCGCCCTGAGACCCAGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | GAAAGATGTGGGGACCGGCTCTTTACCTGGAAGCTGTaGGTGGCCGGCAGGCGGCGCTGTTCCCAGAGGGCC | + |
Preference number: 6 (lower is better) Translates to: ERCGDRLFTWKL*VAGRRRCSQRA Trigger: GGCCCTCTGGGAACAGCGCCGCCTGCCGGCCACCCACAGCTTCCAGGTAAAGAGCCGGTCCCCACATCTTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224032.2 |
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CDS GCA 72 bp | GGTGATCAGCAGCCGCTCCCGAAGGCTCACAGTACGTaGTGGCTGTTGGGACCCGCCTGCCTGTACCCCTCT | + |
Preference number: 6 (lower is better) Translates to: GDQQPLPKAHST*WLLGPACLYPS Trigger: AGAGGGGTACAGGCAGGCGGGTCCCAACAGCCAGCACGTACTGTGAGCCTTCGGGAGCGGCTGCTGATCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | GATCAGCAGCCGCTCCCGAAGGCTCACAGTACGTGCTaGCTGTTGGGACCCGCCTGCCTGTACCCCTCTGGT | + |
Preference number: 6 (lower is better) Translates to: DQQPLPKAHSTC*LLGPACLYPSG Trigger: ACCAGAGGGGTACAGGCAGGCGGGTCCCAACAGCCAGCACGTACTGTGAGCCTTCGGGAGCGGCTGCTGATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | AGGGGGCAGTCTTTCCGTTTGGCTGGAAGATGTCCCTaGAAGCACCGGGACTGGGGGAGGCGGCACAGCAGG | + |
Preference number: 6 (lower is better) Translates to: RGQSFRLAGRCP*KHRDWGRRHSR Trigger: CCTGCTGTGCCGCCTCCCCCAGTCCCGGTGCTTCCAGGGACATCTTCCAGCCAAACGGAAAGACTGCCCCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS TCA 72 bp | AGGGCTGGCAGCACTTCCTGGCACACGATATCCCACTaGGCTCTCCCTCTGCAGCAGCTGTCGAGGGGGCAG | + |
Preference number: 6 (lower is better) Translates to: RAGSTSWHTISH*ALPLQQLSRGQ Trigger: CTGCCCCCTCGACAGCTGCTGCAGAGGGAGAGCTCAGTGGGATATCGTGTGCCAGGAAGTGCTGCCAGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 72 bp | AAAGCAGAACTCATGGACCGAAGCAGAGGCCGCCGGTaGCTTGGGCGGCTTAGGCGTGGGGAGGTTGTAGGG | + |
Preference number: 6 (lower is better) Translates to: KAELMDRSRGRR*LGRLRRGEVVG Trigger: CCCTACAACCTCCCCACGCCTAAGCCGCCCAAGGCACCGGCGGCCTCTGCTTCGGTCCATGAGTTCTGCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 72 bp | CTGGGGGCACAGCCAGGGTCTTGGAGGTGCAACCTGTaGTGGGGTCCTGGTAGGCTACTCGGAGGAGATGCT | + |
Preference number: 6 (lower is better) Translates to: LGAQPGSWRCNL*WGPGRLLGGDA Trigger: AGCATCTCCTCCGAGTAGCCTACCAGGACCCCAGCACAGGTTGCACCTCCAAGACCCTGGCTGTGCCCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | AGCCGCTCCCGAAGGCTCACAGTACGTGCTGGCTGTTaGGACCCGCCTGCCTGTACCCCTCTGGTATCAGGT | + |
Preference number: 6 (lower is better) Translates to: SRSRRLTVRAGC*DPPACTPLVSG Trigger: ACCTGATACCAGAGGGGTACAGGCAGGCGGGTCCCAACAGCCAGCACGTACTGTGAGCCTTCGGGAGCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CAA 72 bp | CGCCGCAGGCGGGCAGCCAGAATGGGTCGAAGAGGCTaGAGAACAGAGCGATGCAGGGACTTCTCCAGGACC | + |
Preference number: 6 (lower is better) Translates to: RRRRAARMGRRG*RTERCRDFSRT Trigger: GGTCCTGGAGAAGTCCCTGCATCGCTCTGTTCTCAAGCCTCTTCGACCCATTCTGGCTGCCCGCCTGCGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CAA 90 bp | GAAAGCCGGCGCCGCAGGCGGGCAGCCAGAATGGGTCGAAGAGGCTaGAGAACAGAGCGATGCAGGGACTTCTCCAGGACCAATTCCAGC | + |
Preference number: 6 (lower is better) Translates to: ESRRRRRAARMGRRG*RTERCRDFSRTNSS Trigger: GCTGGAATTGGTCCTGGAGAAGTCCCTGCATCGCTCTGTTCTCAAGCCTCTTCGACCCATTCTGGCTGCCCGCCTGCGGCGCCGGCTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | CTCTGCAGCAGCTGTCGAGGGGGCAGTCTTTCCGTTTaGCTGGAAGATGTCCCTGGAAGCACCGGGACTGGG | + |
Preference number: 6 (lower is better) Translates to: LCSSCRGGSLSV*LEDVPGSTGTG Trigger: CCCAGTCCCGGTGCTTCCAGGGACATCTTCCAGCCAAACGGAAAGACTGCCCCCTCGACAGCTGCTGCAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CAA 72 bp | CCTCTGCAGCAGCTGTCGAGGGGGCAGTCTTTCCGTTaGGCTGGAAGATGTCCCTGGAAGCACCGGGACTGG | + |
Preference number: 6 (lower is better) Translates to: PLQQLSRGQSFR*AGRCPWKHRDW Trigger: CCAGTCCCGGTGCTTCCAGGGACATCTTCCAGCCAAACGGAAAGACTGCCCCCTCGACAGCTGCTGCAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CAA 90 bp | GGTGATCAGCAGCCGCTCCCGAAGGCTCACAGTACGTGCTGGCTGTaGGGACCCGCCTGCCTGTACCCCTCTGGTATCAGGTGTGTCATA | + |
Preference number: 6 (lower is better) Translates to: GDQQPLPKAHSTCWL*GPACLYPSGIRCVI Trigger: TATGACACACCTGATACCAGAGGGGTACAGGCAGGCGGGTCCCAACAGCCAGCACGTACTGTGAGCCTTCGGGAGCGGCTGCTGATCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CAA 90 bp | CCTGCACTAGCTGACCCACGGCTGTGTATCGGTTTTGCATTAGCATaGTGGCTGCCCGGCCCACCTGCCTCTCTGGTGCCAGCAGAGAGC | + |
Preference number: 6 (lower is better) Translates to: PALADPRLCIGFALA*WLPGPPASLVPAES Trigger: GCTCTCTGCTGGCACCAGAGAGGCAGGTGGGCCGGGCAGCCACAATGCTAATGCAAAACCGATACACAGCCGTGGGTCAGCTAGTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 72 bp | CTTTTCTGCTACAGCCCCCTGGGTCTCAGGGCGCTCTaGCCGGCGATAGATGAGGTAGCCAGTTGCAGGAAG | + |
Preference number: 6 (lower is better) Translates to: LFCYSPLGLRAL*PAIDEVASCRK Trigger: CTTCCTGCAACTGGCTACCTCATCTATCGCCGGGCAGAGCGCCCTGAGACCCAGGGGGCTGTAGCAGAAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | CTGCAGCAGCTTCTGGCGCACCTGTTCTGTCTCCACTaGGGAAGAAAGAGTCAGGTGGGACCCGAAGGCTCC | + |
Preference number: 6 (lower is better) Translates to: LQQLLAHLFCLH*GRKSQVGPEGS Trigger: GGAGCCTTCGGGTCCCACCTGACTCTTTCTTCCCCAGTGGAGACAGAACAGGTGCGCCAGAAGCTGCTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025818.8 ENSMUST00000224032.2 ENSMUST00000225427.2 |
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CDS CCA 72 bp | TGGCAATTGAAGACCCTGGGGGCACAGCCAGGGTCTTaGAGGTGCAACCTGTGCTGGGGTCCTGGTAGGCTA | + |
Preference number: 6 (lower is better) Translates to: WQLKTLGAQPGS*RCNLCWGPGRL Trigger: TAGCCTACCAGGACCCCAGCACAGGTTGCACCTCCAAGACCCTGGCTGTGCCCCCAGGGTCTTCAATTGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 72 bp | CTTCCTGGCACACGATATCCCACTGAGCTCTCCCTCTaGAGCAGCTGTCGAGGGGGCAGTCTTTCCGTTTGG | + |
Preference number: 6 (lower is better) Translates to: LPGTRYPTELSL*SSCRGGSLSVW Trigger: CCAAACGGAAAGACTGCCCCCTCGACAGCTGCTGCAGAGGGAGAGCTCAGTGGGATATCGTGTGCCAGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | CGCGGCTGCAGCGTTGGCCCGCAGTTTTCTTTCTGTTaGTGCCCAGGTACAAAGTTCAGGTTGGTGGCTCCC | + |
Preference number: 6 (lower is better) Translates to: RGCSVGPQFSFC*CPGTKFRLVAP Trigger: GGGAGCCACCAACCTGAACTTTGTACCTGGGCACCAACAGAAAGAAAACTGCGGGCCAACGCTGCAGCCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224288.2 ENSMUST00000237762.2 |
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CDS CCA 72 bp | CTTTCTGTTGGTGCCCAGGTACAAAGTTCAGGTTGGTaGCTCCCAGAGGGTGTGCTCCGGTCTCACCAGGGT | + |
Preference number: 6 (lower is better) Translates to: LSVGAQVQSSGW*LPEGVLRSHQG Trigger: ACCCTGGTGAGACCGGAGCACACCCTCTGGGAGCCACCAACCTGAACTTTGTACCTGGGCACCAACAGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025818.8 ENSMUST00000224288.2 ENSMUST00000225427.2 ENSMUST00000237762.2 |
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CDS GCA 72 bp | GCCAGAATGGGTCGAAGAGGCTTGAGAACAGAGCGATaGAGGGACTTCTCCAGGACCAATTCCAGCCGCTCT | + |
Preference number: 6 (lower is better) Translates to: ARMGRRGLRTER*RDFSRTNSSRS Trigger: AGAGCGGCTGGAATTGGTCCTGGAGAAGTCCCTGCATCGCTCTGTTCTCAAGCCTCTTCGACCCATTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CAA 90 bp | ATGGTAGCCCTGGTCCTTGTAGAGGAAGAGGCCAAACGCATCTGGTaGGGTCACTCGGAACTTGGTAGCACAGAGTTGGCTCAACGTGGC | + |
Preference number: 6 (lower is better) Translates to: MVALVLVEEEAKRIW*GHSELGSTELAQRG Trigger: GCCACGTTGAGCCAACTCTGTGCTACCAAGTTCCGAGTGACCCAACCAGATGCGTTTGGCCTCTTCCTCTACAAGGACCAGGGCTACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS TCA 72 bp | CCAGCCCGAACCTGGGTCAGTAGGTCCTGCACTAGCTaGCCCACGGCTGTGTATCGGTTTTGCATTAGCATT | + |
Preference number: 6 (lower is better) Translates to: PARTWVSRSCTS*PTAVYRFCISI Trigger: AATGCTAATGCAAAACCGATACACAGCCGTGGGTCAGCTAGTGCAGGACCTACTGACCCAGGTTCGGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS TCA 72 bp | CTAGTGAAACTGTGCTGGGTGACGTCAGAGTCCCTCTaGGCATGGTCAATAGGGGAAAGATGTGGGGACCGG | + |
Preference number: 6 (lower is better) Translates to: LVKLCWVTSESL*AWSIGERCGDR Trigger: CCGGTCCCCACATCTTTCCCCTATTGACCATGCTCAGAGGGACTCTGACGTCACCCAGCACAGTTTCACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224032.2 |
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CDS CCA 72 bp | TTTCTTTCTGTTGGTGCCCAGGTACAAAGTTCAGGTTaGTGGCTCCCAGAGGGTGTGCTCCGGTCTCACCAG | + |
Preference number: 6 (lower is better) Translates to: FLSVGAQVQSSG*WLPEGVLRSHQ Trigger: CTGGTGAGACCGGAGCACACCCTCTGGGAGCCACCAACCTGAACTTTGTACCTGGGCACCAACAGAAAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025818.8 ENSMUST00000224288.2 ENSMUST00000225427.2 ENSMUST00000237762.2 |
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CDS CCA 72 bp | TCTGGTTGGGTCACTCGGAACTTGGTAGCACAGAGTTaGCTCAACGTGGCAATTGAAGACCCTGGGGGCACA | + |
Preference number: 6 (lower is better) Translates to: SGWVTRNLVAQS*LNVAIEDPGGT Trigger: TGTGCCCCCAGGGTCTTCAATTGCCACGTTGAGCCAACTCTGTGCTACCAAGTTCCGAGTGACCCAACCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | GCCCTGGTCCTTGTAGAGGAAGAGGCCAAACGCATCTaGTTGGGTCACTCGGAACTTGGTAGCACAGAGTTG | + |
Preference number: 6 (lower is better) Translates to: ALVLVEEEAKRI*LGHSELGSTEL Trigger: CAACTCTGTGCTACCAAGTTCCGAGTGACCCAACCAGATGCGTTTGGCCTCTTCCTCTACAAGGACCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CAA 72 bp | GAGGTCTCGGTGGACACTCGCACTTTGAAACTCCTCTaGAATTTCTCTCGTTTGGTGGGGCCCAGATCCCCG | + |
Preference number: 6 (lower is better) Translates to: EVSVDTRTLKLL*NFSRLVGPRSP Trigger: CGGGGATCTGGGCCCCACCAAACGAGAGAAATTCAAGAGGAGTTTCAAAGTGCGAGTGTCCACCGAGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 72 bp | CCTCTGGTCCTATGTGACCTCCTCTGGCCTGATCCTTaGCTTCTTGGTCAACAGCTATCCGAGGTTTCCCTT | + |
Preference number: 6 (lower is better) Translates to: PLVLCDLLWPDP*LLGQQLSEVSL Trigger: AAGGGAAACCTCGGATAGCTGTTGACCAAGAAGGCAAGGATCAGGCCAGAGGAGGTCACATAGGACCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | TACTCAGCTTCTAACAGGAGGTCAGGAAGGTCGCACTaGGCCAAAACAAGGCTCAGCAGAGGCAGGAACTCA | + |
Preference number: 6 (lower is better) Translates to: YSASNRRSGRSH*AKTRLSRGRNS Trigger: TGAGTTCCTGCCTCTGCTGAGCCTTGTTTTGGCCCAGTGCGACCTTCCTGACCTCCTGTTAGAAGCTGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025818.8 ENSMUST00000224032.2 ENSMUST00000225427.2 |
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CDS CAA 72 bp | TTTTCTTTCTGTTGGTGCCCAGGTACAAAGTTCAGGTaGGTGGCTCCCAGAGGGTGTGCTCCGGTCTCACCA | + |
Preference number: 6 (lower is better) Translates to: FSFCWCPGTKFR*VAPRGCAPVSP Trigger: TGGTGAGACCGGAGCACACCCTCTGGGAGCCACCAACCTGAACTTTGTACCTGGGCACCAACAGAAAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025818.8 ENSMUST00000224288.2 ENSMUST00000225427.2 ENSMUST00000237762.2 |
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CDS CAA 72 bp | GACAGAGGGCTGGAGGTCTCGGTGGACACTCGCACTTaGAAACTCCTCTTGAATTTCTCTCGTTTGGTGGGG | + |
Preference number: 6 (lower is better) Translates to: DRGLEVSVDTRT*KLLLNFSRLVG Trigger: CCCCACCAAACGAGAGAAATTCAAGAGGAGTTTCAAAGTGCGAGTGTCCACCGAGACCTCCAGCCCTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CAA 72 bp | CTGGTCCTTGTAGAGGAAGAGGCCAAACGCATCTGGTaGGGTCACTCGGAACTTGGTAGCACAGAGTTGGCT | + |
Preference number: 6 (lower is better) Translates to: LVLVEEEAKRIW*GHSELGSTELA Trigger: AGCCAACTCTGTGCTACCAAGTTCCGAGTGACCCAACCAGATGCGTTTGGCCTCTTCCTCTACAAGGACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | CTGCCTTTTGTTCCTCTGGTCCTATGTGACCTCCTCTaGCCTGATCCTTGCCTTCTTGGTCAACAGCTATCC | + |
Preference number: 6 (lower is better) Translates to: LPFVPLVLCDLL*PDPCLLGQQLS Trigger: GGATAGCTGTTGACCAAGAAGGCAAGGATCAGGCCAGAGGAGGTCACATAGGACCAGAGGAACAAAAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CAA 90 bp | ATCAGGTGTGTCATACAGTGGGTCTGTAGATGGCTTTTCTTTCTGTaGGTGCCCAGGTACAAAGTTCAGGTTGGTGGCTCCCAGAGGGTG | + |
Preference number: 6 (lower is better) Translates to: IRCVIQWVCRWLFFL*VPRYKVQVGGSQRV Trigger: CACCCTCTGGGAGCCACCAACCTGAACTTTGTACCTGGGCACCAACAGAAAGAAAAGCCATCTACAGACCCACTGTATGACACACCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | TGCCTGTACCCCTCTGGTATCAGGTGTGTCATACAGTaGGTCTGTAGATGGCTTTTCTTTCTGTTGGTGCCC | + |
Preference number: 6 (lower is better) Translates to: CLYPSGIRCVIQ*VCRWLFFLLVP Trigger: GGGCACCAACAGAAAGAAAAGCCATCTACAGACCCACTGTATGACACACCTGATACCAGAGGGGTACAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CAA 72 bp | AAGAGGCCAAACGCATCTGGTTGGGTCACTCGGAACTaGGTAGCACAGAGTTGGCTCAACGTGGCAATTGAA | + |
Preference number: 6 (lower is better) Translates to: KRPNASGWVTRN*VAQSWLNVAIE Trigger: TTCAATTGCCACGTTGAGCCAACTCTGTGCTACCAAGTTCCGAGTGACCCAACCAGATGCGTTTGGCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS GCA 72 bp | TACAGTGGGTCTGTAGATGGCTTTTCTTTCTGTTGGTaGCCAGGTACAAAGTTCAGGTTGGTGGCTCCCAGA | + |
Preference number: 6 (lower is better) Translates to: YSGSVDGFSFCW*PGTKFRLVAPR Trigger: TCTGGGAGCCACCAACCTGAACTTTGTACCTGGGCACCAACAGAAAGAAAAGCCATCTACAGACCCACTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | TCATACAGTGGGTCTGTAGATGGCTTTTCTTTCTGTTaGTGCCCAGGTACAAAGTTCAGGTTGGTGGCTCCC | + |
Preference number: 6 (lower is better) Translates to: SYSGSVDGFSFC*CPGTKFRLVAP Trigger: GGGAGCCACCAACCTGAACTTTGTACCTGGGCACCAACAGAAAGAAAAGCCATCTACAGACCCACTGTATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |
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CDS CCA 72 bp | TCTGGTATCAGGTGTGTCATACAGTGGGTCTGTAGATaGCTTTTCTTTCTGTTGGTGCCCAGGTACAAAGTT | + |
Preference number: 6 (lower is better) Translates to: SGIRCVIQWVCR*LFFLLVPRYKV Trigger: AACTTTGTACCTGGGCACCAACAGAAAGAAAAGCCATCTACAGACCCACTGTATGACACACCTGATACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025818.8 ENSMUST00000225427.2 |