Pregenerated sensors for RIMS4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035226Ensembl transcript IDs: ENSMUST00000044734.3
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGACCAGGCCGTTCCTGCTCCCCAAGAGGACACAGGGAAAGGTaGGTAGATGAAGGGAGGCTCCCAGCCCAAGGACTCTGGGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: GGPGRSCSPRGHRER*VDEGRLPAQGLWGP Trigger: GGGACCCCAGAGTCCTTGGGCTGGGAGCCTCCCTTCATCTACCCACCTTTCCCTGTGTCCTCTTGGGGAGCAGGAACGGCCTGGTCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR GCA 90 bp | CAGACGCACCCCAAACCCTCCCTCCCTGGAGGACCAGGCCGTTCCTaGTCCCCAAGAGGACACAGGGAAAGGTGGGTAGATGAAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: QTHPKPSLPGGPGRS*SPRGHRERWVDEGR Trigger: CCTCCCTTCATCTACCCACCTTTCCCTGTGTCCTCTTGGGGAGCAGGAACGGCCTGGTCCTCCAGGGAGGGAGGGTTTGGGGTGCGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CCA 90 bp | CCTCAGGAGCTGGCTCCGGATCCTTGCAAACTGCCCCATCAGCTCTaGGGCTGGAGTAGCTGCCGGAACCCAGTGCCGCAGGAAAGACAC | + |
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Preference number: 1 (lower is better) Translates to: PQELAPDPCKLPHQL*GWSSCRNPVPQERH Trigger: GTGTCTTTCCTGCGGCACTGGGTTCCGGCAGCTACTCCAGCCCCAGAGCTGATGGGGCAGTTTGCAAGGATCCGGAGCCAGCTCCTGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CCA 90 bp | GAGCTGGCTCCGGATCCTTGCAAACTGCCCCATCAGCTCTGGGGCTaGAGTAGCTGCCGGAACCCAGTGCCGCAGGAAAGACACTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: ELAPDPCKLPHQLWG*SSCRNPVPQERHLL Trigger: CAGCAAGTGTCTTTCCTGCGGCACTGGGTTCCGGCAGCTACTCCAGCCCCAGAGCTGATGGGGCAGTTTGCAAGGATCCGGAGCCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CCA 90 bp | CTAACCTGGACTACACCCTACACAGCAGGGACTAGTGAGGAGGACTaGCGGGCTGCTGGGCGCCTCCCAGGAGGGGTGATAGAAATGTGC | + |
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Preference number: 1 (lower is better) Translates to: LTWTTPYTAGTSEED*RAAGRLPGGVIEMC Trigger: GCACATTTCTATCACCCCTCCTGGGAGGCGCCCAGCAGCCCGCCAGTCCTCCTCACTAGTCCCTGCTGTGTAGGGTGTAGTCCAGGTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR TCA 90 bp | AGCCCTGCTCCCTTGTTCAGGAGGCCTGCCCATCCACAGTCCCAATaGCACTCTGAAGACCAATGGGAGAAGAGGGGCCTGTCCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: SPAPLFRRPAHPQSQ*HSEDQWEKRGLSTA Trigger: GGCTGTGGACAGGCCCCTCTTCTCCCATTGGTCTTCAGAGTGTCATTGGGACTGTGGATGGGCAGGCCTCCTGAACAAGGGAGCAGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CCA 90 bp | GGACAGAAATGGCTCCCACACCCAGTGGTCACAGCCCCTTGGAAGTaGGGCACACGCTTACAATGGTACAAGAAATGGGGCTCCAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: GQKWLPHPVVTAPWK*GTRLQWYKKWGSSP Trigger: GGGGCTGGAGCCCCATTTCTTGTACCATTGTAAGCGTGTGCCCCACTTCCAAGGGGCTGTGACCACTGGGTGTGGGAGCCATTTCTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR GCA 90 bp | TGCTCCGCTCCTACTACCCCCGACACTGGAGAGTCGTTCCCTATGTaGAAGGTTCTGGAAACTCAGGTCCCCACAGTCCTCCACCATATC | + |
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Preference number: 1 (lower is better) Translates to: CSAPTTPDTGESFPM*KVLETQVPTVLHHI Trigger: GATATGGTGGAGGACTGTGGGGACCTGAGTTTCCAGAACCTTGCACATAGGGAACGACTCTCCAGTGTCGGGGGTAGTAGGAGCGGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR TCA 90 bp | CAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCCCGAAGCTATGGATaGAAATCACTCTGCCCCGAGTCCTTTGGTGAGGACAGAAATGGC | + |
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Preference number: 1 (lower is better) Translates to: QQWEQAGLVGPRSYG*KSLCPESFGEDRNG Trigger: GCCATTTCTGTCCTCACCAAAGGACTCGGGGCAGAGTGATTTTCATCCATAGCTTCGGGGACCAACAAGCCCAGCCTGTTCCCACTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR TCA 90 bp | CAACAGCTCTGCCTTGGGAGAGTGTGGGAGCCCCTGTGCTGTTTCTaGACCCCAAAGTGCTCAAGAAGGAACCCGGTGGTGAATCACATG | + |
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Preference number: 1 (lower is better) Translates to: QQLCLGRVWEPLCCF*TPKCSRRNPVVNHM Trigger: CATGTGATTCACCACCGGGTTCCTTCTTGAGCACTTTGGGGTTCAGAAACAGCACAGGGGCTCCCACACTCTCCCAAGGCAGAGCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CCA 90 bp | GAACCAGGAACCAGGTGGGACTCAATAGAGTCCTGGCATCCTTGGTaGAAAATGACACCCTCTAATGGAGTCCAGGCCCCTCTGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: EPGTRWDSIESWHPW*KMTPSNGVQAPLQG Trigger: GCCTTGCAGAGGGGCCTGGACTCCATTAGAGGGTGTCATTTTCCACCAAGGATGCCAGGACTCTATTGAGTCCCACCTGGTTCCTGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR TCA 90 bp | TGGGCCTGGTGTAGCACTCGCTGTTGCTCAATAAATAAATGCAGGTaGCCTTGCCTGGTGCAACAGCTCTGCCTTGGGAGAGTGTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: WAWCSTRCCSINKCR*PCLVQQLCLGRVWE Trigger: CTCCCACACTCTCCCAAGGCAGAGCTGTTGCACCAGGCAAGGTCACCTGCATTTATTTATTGAGCAACAGCGAGTGCTACACCAGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR GCA 90 bp | GCTAGGCAAGCCTATAGAAACTCTCTGTCCACTAAGGTCCTGTTTTaGAGACACAGGCCCTCTTGGAGGGCCAAGAGAGCCATTGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: ARQAYRNSLSTKVLF*RHRPSWRAKRAIAG Trigger: CCCTGCAATGGCTCTCTTGGCCCTCCAAGAGGGCCTGTGTCTGCAAAACAGGACCTTAGTGGACAGAGAGTTTCTATAGGCTTGCCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CCA 90 bp | GCAGAGTTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTaGGCTTGTTGGTCCCCGAAGCTATGGATGAAAATCACTCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: AEFELTEGQTAVGTG*ACWSPKLWMKITLP Trigger: GGGCAGAGTGATTTTCATCCATAGCTTCGGGGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAACTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CCA 90 bp | GGCCAAGAGAGCCATTGCAGGGGACAGGAAAGGGGTCTAAGGCTCTaGGCCTGGTGTAGCACTCGCTGTTGCTCAATAAATAAATGCAGG | + |
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Preference number: 1 (lower is better) Translates to: GQESHCRGQERGLRL*AWCSTRCCSINKCR Trigger: CCTGCATTTATTTATTGAGCAACAGCGAGTGCTACACCAGGCCCAGAGCCTTAGACCCCTTTCCTGTCCCCTGCAATGGCTCTCTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CCA 90 bp | CTACTACCCCCGACACTGGAGAGTCGTTCCCTATGTGCAAGGTTCTaGAAACTCAGGTCCCCACAGTCCTCCACCATATCACAGATGACA | + |
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Preference number: 1 (lower is better) Translates to: LLPPTLESRSLCARF*KLRSPQSSTISQMT Trigger: TGTCATCTGTGATATGGTGGAGGACTGTGGGGACCTGAGTTTCCAGAACCTTGCACATAGGGAACGACTCTCCAGTGTCGGGGGTAGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CCA 90 bp | GATGAACCAGGAACCAGGTGGGACTCAATAGAGTCCTGGCATCCTTaGTGGAAAATGACACCCTCTAATGGAGTCCAGGCCCCTCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: DEPGTRWDSIESWHP*WKMTPSNGVQAPLQ Trigger: TTGCAGAGGGGCCTGGACTCCATTAGAGGGTGTCATTTTCCACCAAGGATGCCAGGACTCTATTGAGTCCCACCTGGTTCCTGGTTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR TCA 90 bp | GGTTCTGGAAACTCAGGTCCCCACAGTCCTCCACCATATCACAGATaGCAATGTCCTTTCCAGTCCACCAAGAGCTCCAGACCAGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: GSGNSGPHSPPPYHR*QCPFQSTKSSRPAC Trigger: ACAAGCTGGTCTGGAGCTCTTGGTGGACTGGAAAGGACATTGTCATCTGTGATATGGTGGAGGACTGTGGGGACCTGAGTTTCCAGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CCA 90 bp | CTAACGTGCTTGCACACCTGTGCTGTGAACCACCGGAGAACGAGCTaGCACTTTCAAAGTCACAACTTGAGCAAGCACCTCTCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: LTCLHTCAVNHRRTS*HFQSHNLSKHLSLS Trigger: AGAGAGAGAGAGGTGCTTGCTCAAGTTGTGACTTTGAAAGTGCCAGCTCGTTCTCCGGTGGTTCACAGCACAGGTGTGCAAGCACGTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CCA 90 bp | TTCTTGGTAGATGAACCAGGAACCAGGTGGGACTCAATAGAGTCCTaGCATCCTTGGTGGAAAATGACACCCTCTAATGGAGTCCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: FLVDEPGTRWDSIES*HPWWKMTPSNGVQA Trigger: GGCCTGGACTCCATTAGAGGGTGTCATTTTCCACCAAGGATGCCAGGACTCTATTGAGTCCCACCTGGTTCCTGGTTCATCTACCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR TCA 90 bp | CTCCAGGAGGTGAGCGAGATTTCACAGAACAAACAAGAAAGTCACTaGGGGGTCTCACTGACCACCTCAGGGTGTTATTGCTTTGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LQEVSEISQNKQESH*GVSLTTSGCYCFGV Trigger: GACTCCAAAGCAATAACACCCTGAGGTGGTCAGTGAGACCCCTCAGTGACTTTCTTGTTTGTTCTGTGAAATCTCGCTCACCTCCTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR TCA 90 bp | GCGAGATTTCACAGAACAAACAAGAAAGTCACTGAGGGGTCTCACTaGCCACCTCAGGGTGTTATTGCTTTGGAGTCAGTGCTCCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: ARFHRTNKKVTEGSH*PPQGVIALESVLLG Trigger: ACCAAGGAGCACTGACTCCAAAGCAATAACACCCTGAGGTGGTCAGTGAGACCCCTCAGTGACTTTCTTGTTTGTTCTGTGAAATCTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR TCA 90 bp | TTTAATTTCCAACATGAGCTATGTGGTCATGAATACAATGCCATGTaGCCCACTCCAACTCAGACGCACCCCAAACCCTCCCTCCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: FNFQHELCGHEYNAM*PTPTQTHPKPSLPG Trigger: TCCAGGGAGGGAGGGTTTGGGGTGCGTCTGAGTTGGAGTGGGTCACATGGCATTGTATTCATGACCACATAGCTCATGTTGGAAATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CCA 90 bp | TTTCCAAGTAGAAGGAATTTCTTGGTAGATGAACCAGGAACCAGGTaGGACTCAATAGAGTCCTGGCATCCTTGGTGGAAAATGACACCC | + |
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Preference number: 1 (lower is better) Translates to: FPSRRNFLVDEPGTR*DSIESWHPWWKMTP Trigger: GGGTGTCATTTTCCACCAAGGATGCCAGGACTCTATTGAGTCCCACCTGGTTCCTGGTTCATCTACCAAGAAATTCCTTCTACTTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAGGACCAGGCCGTTCCTGCTCCCCAAGAGGACACAGGGAAAGGTGGGTACTGAGAGGCCTGCTGTaGCCCGAGTTTCCTAACCTC | + |
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Preference number: 2 (lower is better) Translates to: PGGPGRSCSPRGHRERWVLRGLL*PEFPNL Trigger: GAGGTTAGGAAACTCGGGCCACAGCAGGCCTCTCAG...TACCCACCTTTCCCTGTGTCCTCTTGGGGAGCAGGAACGGCCTGGTCCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CAA 90 bp | TGGGGCTGGAGTAGCTGCCGGAACCCAGTGCCGCAGGAAAGACACTaGCTGGTAATTGGCACCATGGAGATGGCCGGCTTGGTTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: WGWSSCRNPVPQERH*LVIGTMEMAGLVLD Trigger: GTCCAGAACCAAGCCGGCCATCTCCATGGTGCCAATTACCAGCAAGTGTCTTTCCTGCGGCACTGGGTTCCGGCAGCTACTCCAGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCCACGGGCAGGCAGAAGGAGACCCATACTCCCCTCCAAGTGGGGAGCTCTGGGTAGGGCAGAAGAGTaGTTTGCTCTGCCACCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LPRAGRRRPILPSKWGALGRAEE*FALPPQ Trigger: CTGAGGTGGCAGAGCAAACCACTCTTCTGCCCTACC...CAGAGCTCCCCACTTGGAGGGGAGTATGGGTCTCCTTCTGCCTGCCCGTGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR TCA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACCCCAGTGCATGTTGCTaGGAGGCCTGCTGTGGCCCG | + |
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Preference number: 2 (lower is better) Translates to: KTLPLMIPGEIAQETPDNPSACC*EACCGP Trigger: CGGGCCACAGCAGGCCTCTCAGCAACATGCACTGGG...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR CCA 90 bp | ACAACCCAGCCTAAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGCAGGTCAGGGCTGGGTaGTCTCCAGGCCATCTCGCG | + |
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Preference number: 2 (lower is better) Translates to: TTQPKTLPLMIPGEIAQEQVRAG*SPGHLA Trigger: CGCGAGATGGCCTGGAGACCACCCAGCCCTGACCTG...CTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTTAGGCTGGGTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CAA 90 bp | TTGCTGGTAATTGGCACCATGGAGATGGCCGGCTTGGTTCTGGACTaGGCTCTGGGCAGCGAGCTTCCAAGGAGGCAAAAGAGGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: LLVIGTMEMAGLVLD*ALGSELPRRQKRDR Trigger: CCTGTCCCTCTTTTGCCTCCTTGGAAGCTCGCTGCCCAGAGCCAAGTCCAGAACCAAGCCGGCCATCTCCATGGTGCCAATTACCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR GCA 90 bp | ACAACCCAGCCTAAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGCTCCAATGTCCAATGTaGCCCTGGGCCTGGGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: TTQPKTLPLMIPGEIAQELQCPM*PWAWGP Trigger: GGGACCCCAGGCCCAGGGGCACATTGGACATTGGAG...CTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTTAGGCTGGGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR GCA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCCCACAGGAAGGCAGCTaGCCAGGTCTCATTGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: FELTEGQTAVGTGWACWSPQEGS*PGLIGA Trigger: GGCTCCAATGAGACCTGGGCAGCTGCCTTCCTGTGG...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR CCA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACGTCCCAGGTCAGGGCTaGGTGGTCTCCAGGCCATCT | + |
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Preference number: 2 (lower is better) Translates to: KTLPLMIPGEIAQETPDNVPGQG*VVSRPS Trigger: AGATGGCCTGGAGACCACCCAGCCCTGACCTGGGAC...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR CCA 90 bp | GAAATGTGCTTCTATAGGGGCCTGACTGTGTCCTCCCTCGCATGCAAAAGGGCTTGTCCAATGTGCCCCTaGGCCTGGGGTCCCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: EMCFYRGLTVSSLACKRACPMCP*AWGPRS Trigger: TGACCTGGGACCCCAGGCCCAGGGGCACATTGGACA...AGCCCTTTTGCATGCGAGGGAGGACACAGTCAGGCCCCTATAGAAGCACATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCGGCTCCCACACCCAGTaGTCACAGCCCCTTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: FELTEGQTAVGTGWACWSGSHTQ*SQPLGS Trigger: ACTTCCAAGGGGCTGTGACCACTGGGTGTGGGAGCC...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CAA 90 bp | CAGGAAAGACACTTGCTGGTAATTGGCACCATGGAGATGGCCGGCTaGGTTCTGGACTTGGCTCTGGGCAGCGAGCTTCCAAGGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: QERHLLVIGTMEMAG*VLDLALGSELPRRQ Trigger: TTGCCTCCTTGGAAGCTCGCTGCCCAGAGCCAAGTCCAGAACCAAGCCGGCCATCTCCATGGTGCCAATTACCAGCAAGTGTCTTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CAA 90 bp | TACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCCATCTCTCCTaGAGCCAAGGTGATGAGGCTGGGCAGTGGCTTCTGCCCTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: YTYSSASLLLERHLS*SQGDEAGQWLLPLV Trigger: TACCAAGGGCAGAAGCCACTGCCCAGCCTCATCACCTTGGCTCAAGGAGAGATGGCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR TCA 90 bp | ACAACCCAGCCTAAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGGCTCAGCATGAGACATaGAGGGGACCCCTAGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: TTQPKTLPLMIPGEIAQEAQHET*RGPLGG Trigger: TCCGCCTAGGGGTCCCCTTCATGTCTCATGCTGAGC...CTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTTAGGCTGGGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR TCA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACTGGCCAACCTGCCCTTaGGCAGTGGTCTCCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: KTLPLMIPGEIAQETPDNWPTCP*AVVSQL Trigger: AAGCTGGGAGACCACTGCTCAAGGGCAGGTTGGCCA...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR GCA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACGCTGCCGGAACCCAGTaGCGCAGGAAAGACACTTGC | + |
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Preference number: 2 (lower is better) Translates to: KTLPLMIPGEIAQETPDNAAGTQ*RRKDTC Trigger: GCAAGTGTCTTTCCTGCGGCACTGGGTTCCGGCAGC...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCGCTTGGTTCTGGACTTaGCTCTGGGCAGCGAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: FELTEGQTAVGTGWACWSAWFWT*LWAASF Trigger: GAAGCTCGCTGCCCAGAGCCAAGTCCAGAACCAAGC...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR CCA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACCATCAGCTCTGGGGCTaGAGTAGCTGCCGGAACCCA | + |
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Preference number: 2 (lower is better) Translates to: KTLPLMIPGEIAQETPDNHQLWG*SSCRNP Trigger: TGGGTTCCGGCAGCTACTCCAGCCCCAGAGCTGATG...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCTAAATTCTTACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCCATCTCCTGCCCCATCAGCTCTaGGGCTGGAGTAGCTGCCGG | + |
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Preference number: 2 (lower is better) Translates to: PLNSYTYSSASLLLERHLLPHQL*GWSSCR Trigger: CCGGCAGCTACTCCAGCCCCAGAGCTGATGGGGCAG...GAGATGGCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR CCA 90 bp | GAAATGTGCTTCTATAGGGGCCTGACTGTGTCCTCCCTCGCATGCAAAAGGGCTGAGGGGATGGATGGATaGACTCAGACAGGCTGCGGC | + |
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Preference number: 2 (lower is better) Translates to: EMCFYRGLTVSSLACKRAEGMDG*TQTGCG Trigger: GCCGCAGCCTGTCTGAGTCCATCCATCCATCCCCTC...AGCCCTTTTGCATGCGAGGGAGGACACAGTCAGGCCCCTATAGAAGCACATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CAA 90 bp | GAGGCTCCCAGCCCAAGGACTCTGGGGTCCCATCTTCCTGTCACCTaGCAGGATGGCACAAAGGACTCAGAGGTAACACCTATGTCTACT | + |
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Preference number: 2 (lower is better) Translates to: EAPSPRTLGSHLPVT*QDGTKDSEVTPMST Trigger: AGTAGACATAGGTGTTACCTCTGAGTCCTTTGTGCCATCCTGCAAGGTGACAGGAAGATGGGACCCCAGAGTCCTTGGGCTGGGAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR-3UTR GCA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACCTGGCTCCGGATCCTTaGAAACTGCCCCATCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: KTLPLMIPGEIAQETPDNLAPDP*KLPHQL Trigger: GAGCTGATGGGGCAGTTTGCAAGGATCCGGAGCCAG...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR GCA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACTGGACTCAGACAGGCTaGGGCAAAGCTCCTTCCACG | + |
|
Preference number: 2 (lower is better) Translates to: KTLPLMIPGEIAQETPDNWTQTG*GKAPST Trigger: CGTGGAAGGAGCTTTGCCGCAGCCTGTCTGAGTCCA...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CCA 90 bp | GAAATGTGCTTCTATAGGGGCCTGACTGTGTCCTCCCTCGCATGCAAAAGGGCTTGGAGATGGCCGGCTTaGTTCTGGACTTGGCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: EMCFYRGLTVSSLACKRAWRWPA*FWTWLW Trigger: CCAGAGCCAAGTCCAGAACCAAGCCGGCCATCTCCA...AGCCCTTTTGCATGCGAGGGAGGACACAGTCAGGCCCCTATAGAAGCACATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CCA 90 bp | GAAATGTGCTTCTATAGGGGCCTGACTGTGTCCTCCCTCGCATGCAAAAGGGCTCTTGTTGCAATCCCATaGGGCAAGGACCCCTGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: EMCFYRGLTVSSLACKRALVAIP*GKDPWG Trigger: TCCCCAGGGGTCCTTGCCCCATGGGATTGCAACAAG...AGCCCTTTTGCATGCGAGGGAGGACACAGTCAGGCCCCTATAGAAGCACATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAACCCAGCCTAAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGGAACCAGGAACCAGGTaGGACTCAATAGAGTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TTQPKTLPLMIPGEIAQEEPGTR*DSIESW Trigger: CCAGGACTCTATTGAGTCCCACCTGGTTCCTGGTTC...CTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTTAGGCTGGGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCGGAGTCAGTGCTCCTTaGTGCTATCATGCTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: FELTEGQTAVGTGWACWSGVSAP*CYHALS Trigger: AGAGAGAGCATGATAGCACCAAGGAGCACTGACTCC...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACGTCCCAATGACACTCTaGAGACCAATGGGAGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KTLPLMIPGEIAQETPDNVPMTL*RPMGEE Trigger: CTCTTCTCCCATTGGTCTTCAGAGTGTCATTGGGAC...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAACCCAGCCTAAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGCTTCCCTTTGGTCTCTaGTGGCTCCCAATTCCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: TTQPKTLPLMIPGEIAQELPFGL*WLPIPR Trigger: TCTAGGAATTGGGAGCCAGCAGAGACCAAAGGGAAG...CTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTTAGGCTGGGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CAA 90 bp | CTCACTGACCACCTCAGGGTGTTATTGCTTTGGAGTCAGTGCTCCTaGGTGCTATCATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LTDHLRVLLLWSQCS*VLSCSLSLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATGATAGCACCAAGGAGCACTGACTCCAAAGCAATAACACCCTGAGGTGGTCAGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGGGAGAATTTCCAAGTAGAAGGAATTTCTTGGTAGATGAACCAGGAACCAGGGTGTCCTCCCTCGCATaGAAAAGGGCTCCCGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: MGEFPSRRNFLVDEPGTRVSSLA*KRAPAG Trigger: GCCTGCGGGAGCCCTTTTGCATGCGAGGGAGGACAC...CCTGGTTCCTGGTTCATCTACCAAGAAATTCCTTCTACTTGGAAATTCTCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGGAGCCTCTAAATTCTTACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCACACTTGCTGGTAATTaGCACCATGGAGATGGCCGG | + |
|
Preference number: 2 (lower is better) Translates to: LEPLNSYTYSSASLLLERTLAGN*HHGDGR Trigger: CCGGCCATCTCCATGGTGCCAATTACCAGCAAGTGT...GCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGGCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAACCCAGCCTAAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGGAGTCTGTAATCTTCTaGAATGTACTGGGGTCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: TTQPKTLPLMIPGEIAQEESVIF*NVLGSP Trigger: GGGAGACCCCAGTACATTCCAGAAGATTACAGACTC...CTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTTAGGCTGGGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CAA 90 bp | ACAAGAAAGTCACTGAGGGGTCTCACTGACCACCTCAGGGTGTTATaGCTTTGGAGTCAGTGCTCCTTGGTGCTATCATGCTCTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TRKSLRGLTDHLRVL*LWSQCSLVLSCSLS Trigger: AGAGAGAGAGCATGATAGCACCAAGGAGCACTGACTCCAAAGCAATAACACCCTGAGGTGGTCAGTGAGACCCCTCAGTGACTTTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCAGGATATCACACTGTTaGAAAAATGGGGTGATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FELTEGQTAVGTGWACWSRISHC*KNGVMA Trigger: AGCCATCACCCCATTTTTTCAACAGTGTGATATCCT...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACAGTGGCTTCTGCCCTTaGTACAGGATGGTTTATTTA | + |
|
Preference number: 2 (lower is better) Translates to: KTLPLMIPGEIAQETPDNSGFCP*YRMVYL Trigger: TAAATAAACCATCCTGTACCAAGGGCAGAAGCCACT...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CAA 90 bp | TTAGCCAGCCTGGGAATGGGAGAATTTCCAAGTAGAAGGAATTTCTaGGTAGATGAACCAGGAACCAGGTGGGACTCAATAGAGTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LASLGMGEFPSRRNF*VDEPGTRWDSIESW Trigger: CCAGGACTCTATTGAGTCCCACCTGGTTCCTGGTTCATCTACCAAGAAATTCCTTCTACTTGGAAATTCTCCCATTCCCAGGCTGGCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGGGAGAATTTCCAAGTAGAAGGAATTTCTTGGTAGATGAACCAGGAACCAGGATCCTTGGTGGAAAATaGCACCCTCTAATGGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: MGEFPSRRNFLVDEPGTRILGGK*HPLMES Trigger: GGACTCCATTAGAGGGTGTCATTTTCCACCAAGGAT...CCTGGTTCCTGGTTCATCTACCAAGAAATTCCTTCTACTTGGAAATTCTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | CTGGCTCCGGATCCTTGCAAACTGCCCCATCAGCTCTaGGGCTGGAGTAGCTGCCGGAACCCAGTGCCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LAPDPCKLPHQL*GWSSCRNPVPQ Trigger: CTGCGGCACTGGGTTCCGGCAGCTACTCCAGCCCCAGAGCTGATGGGGCAGTTTGCAAGGATCCGGAGCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCACGGGCAGGCAGAAGGAGACCCATACTCCCCTCCAAGTGGGGAGCTCTGGCTGGCTCCGGATCCTaGCAAACTGCCCCATCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LPRAGRRRPILPSKWGALAGSGS*QTAPSA Trigger: AGCTGATGGGGCAGTTTGCAAGGATCCGGAGCCAGC...CAGAGCTCCCCACTTGGAGGGGAGTATGGGTCTCCTTCTGCCTGCCCGTGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | GGCCGTTCCTGCTCCCCAAGAGGACACAGGGAAAGGTaGGTAGATGAAGGGAGGCTCCCAGCCCAAGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: GRSCSPRGHRER*VDEGRLPAQGL Trigger: GAGTCCTTGGGCTGGGAGCCTCCCTTCATCTACCCACCTTTCCCTGTGTCCTCTTGGGGAGCAGGAACGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR GCA 72 bp | TGCAAACTGCCCCATCAGCTCTGGGGCTGGAGTAGCTaGCGGAACCCAGTGCCGCAGGAAAGACACTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CKLPHQLWGWSS*RNPVPQERHLL Trigger: CAGCAAGTGTCTTTCCTGCGGCACTGGGTTCCGGCAGCTACTCCAGCCCCAGAGCTGATGGGGCAGTTTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR GCA 72 bp | GCTGCTGGGCGCCTCCCAGGAGGGGTGATAGAAATGTaGTTCTATAGGGGCCTGACTGTGTCCTCCCTCGCA | + |
|
Preference number: 3 (lower is better) Translates to: AAGRLPGGVIEM*FYRGLTVSSLA Trigger: TGCGAGGGAGGACACAGTCAGGCCCCTATAGAAGCACATTTCTATCACCCCTCCTGGGAGGCGCCCAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR GCA 72 bp | GCCCTTGAGCAGTGGTCTCCCAGCTTTGTCCCCCAGTaGATGTTGCTGAGAGGCCTGCTGTGGCCCGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: ALEQWSPSFVPQ*MLLRGLLWPEF Trigger: AAACTCGGGCCACAGCAGGCCTCTCAGCAACATGCACTGGGGGACAAAGCTGGGAGACCACTGCTCAAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | CCACCAAGAGCTCCAGACCAGCTTGTTGCAATCCCATaGGGCAAGGACCCCTGGGGATCCTGCCAAGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PPRAPDQLVAIP*GKDPWGSCQAS Trigger: TGAGGCTTGGCAGGATCCCCAGGGGTCCTTGCCCCATGGGATTGCAACAAGCTGGTCTGGAGCTCTTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR TCA 72 bp | CAGGAGGCCTGCCCATCCACAGTCCCAATGACACTCTaGAGACCAATGGGAGAAGAGGGGCCTGTCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: QEACPSTVPMTL*RPMGEEGPVHS Trigger: GCTGTGGACAGGCCCCTCTTCTCCCATTGGTCTTCAGAGTGTCATTGGGACTGTGGATGGGCAGGCCTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | CCATGGAGATGGCCGGCTTGGTTCTGGACTTGGCTCTaGGCAGCGAGCTTCCAAGGAGGCAAAAGAGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PWRWPAWFWTWL*AASFQGGKRGT Trigger: TGTCCCTCTTTTGCCTCCTTGGAAGCTCGCTGCCCAGAGCCAAGTCCAGAACCAAGCCGGCCATCTCCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGAGGACCAGGCCGTTCCTGCTCCCCAAGAGGACACAGGGAAAGGTGGGTACCGCAGGAAAGACACTaGCTGGTAATTGGCACCATG | + |
|
Preference number: 3 (lower is better) Translates to: PGGPGRSCSPRGHRERWVPQERH*LVIGTM Trigger: CATGGTGCCAATTACCAGCAAGTGTCTTTCCTGCGG...TACCCACCTTTCCCTGTGTCCTCTTGGGGAGCAGGAACGGCCTGGTCCTCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR TCA 72 bp | CCCTTGTTCAGGAGGCCTGCCCATCCACAGTCCCAATaGCACTCTGAAGACCAATGGGAGAAGAGGGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLFRRPAHPQSQ*HSEDQWEKRGL Trigger: CAGGCCCCTCTTCTCCCATTGGTCTTCAGAGTGTCATTGGGACTGTGGATGGGCAGGCCTCCTGAACAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR TCA 72 bp | AGTGGTCTCCCAGCTTTGTCCCCCAGTGCATGTTGCTaGGAGGCCTGCTGTGGCCCGAGTTTCCTAACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGLPALSPSACC*EACCGPSFLTS Trigger: AGAGGTTAGGAAACTCGGGCCACAGCAGGCCTCTCAGCAACATGCACTGGGGGACAAAGCTGGGAGACCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR TCA 72 bp | TGCCTTGGGAGAGTGTGGGAGCCCCTGTGCTGTTTCTaGACCCCAAAGTGCTCAAGAAGGAACCCGGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CLGRVWEPLCCF*TPKCSRRNPVV Trigger: CACCACCGGGTTCCTTCTTGAGCACTTTGGGGTTCAGAAACAGCACAGGGGCTCCCACACTCTCCCAAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | TTGGCACCATGGAGATGGCCGGCTTGGTTCTGGACTTaGCTCTGGGCAGCGAGCTTCCAAGGAGGCAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LAPWRWPAWFWT*LWAASFQGGKR Trigger: TCTTTTGCCTCCTTGGAAGCTCGCTGCCCAGAGCCAAGTCCAGAACCAAGCCGGCCATCTCCATGGTGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | TGGCTCCCACACCCAGTGGTCACAGCCCCTTGGAAGTaGGGCACACGCTTACAATGGTACAAGAAATGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: WLPHPVVTAPWK*GTRLQWYKKWG Trigger: GCCCCATTTCTTGTACCATTGTAAGCGTGTGCCCCACTTCCAAGGGGCTGTGACCACTGGGTGTGGGAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | ATGCAGGTGACCTTGCCTGGTGCAACAGCTCTGCCTTaGGAGAGTGTGGGAGCCCCTGTGCTGTTTCTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: MQVTLPGATALP*ESVGAPVLFLN Trigger: GTTCAGAAACAGCACAGGGGCTCCCACACTCTCCCAAGGCAGAGCTGTTGCACCAGGCAAGGTCACCTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCACCTCCTCCTTCCCTTaGGTCTCTGCTGGCTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: FELTEGQTAVGTGWACWSTSSFP*VSAGSQ Trigger: TTGGGAGCCAGCAGAGACCAAAGGGAAGGAGGAGGT...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCCTCCAGACCAGCTTGTaGCAATCCCATGGGGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FELTEGQTAVGTGWACWSLQTSL*QSHGAR Trigger: CCTTGCCCCATGGGATTGCAACAAGCTGGTCTGGAG...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR TCA 72 bp | CTCCACCCCCTCTGCTCCTTTCCTGATGGCAGAGTTTaGGTTGACAGAGGGTCAGACAGCAGTGGGAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LHPLCSFPDGRV*VDRGSDSSGNR Trigger: CCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAACTCTGCCATCAGGAAAGGAGCAGAGGGGGTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR TCA 72 bp | CTTCATCCTTCCCTGACTCTGGCTCAGCATGAGACATaGAGGGGACCCCTAGGCGGAAATGCCACCGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: LHPSLTLAQHET*RGPLGGNATGH Trigger: ATGTCCGGTGGCATTTCCGCCTAGGGGTCCCCTTCATGTCTCATGCTGAGCCAGAGTCAGGGAAGGATGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR GCA 72 bp | CCTACTACCCCCGACACTGGAGAGTCGTTCCCTATGTaGAAGGTTCTGGAAACTCAGGTCCCCACAGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PTTPDTGESFPM*KVLETQVPTVL Trigger: GAGGACTGTGGGGACCTGAGTTTCCAGAACCTTGCACATAGGGAACGACTCTCCAGTGTCGGGGGTAGTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | GAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTaGTCCCCGAAGCTATGGATGAAAATCACTCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: EGQTAVGTGWAC*SPKLWMKITLP Trigger: GGGCAGAGTGATTTTCATCCATAGCTTCGGGGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR TCA 72 bp | TGCAAGGCCCAACAACCCTCGGGAATGCTGAAGGTGTaGCACCAGCGTGCTGAGTGTGATGAACAGTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CKAQQPSGMLKV*HQRAECDEQLG Trigger: CCCTAACTGTTCATCACACTCAGCACGCTGGTGTCACACCTTCAGCATTCCCGAGGGTTGTTGGGCCTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAATGTGCTTCTATAGGGGCCTGACTGTGTCCTCCCTCGCATGCAAAAGGGCTGAACGCCATCTCTCCTaGAGCCAAGGTGATGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: EMCFYRGLTVSSLACKRAERHLS*SQGDEA Trigger: AGCCTCATCACCTTGGCTCAAGGAGAGATGGCGTTC...AGCCCTTTTGCATGCGAGGGAGGACACAGTCAGGCCCCTATAGAAGCACATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | ACCAGGTGGGACTCAATAGAGTCCTGGCATCCTTGGTaGAAAATGACACCCTCTAATGGAGTCCAGGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TRWDSIESWHPW*KMTPSNGVQAP Trigger: AGGGGCCTGGACTCCATTAGAGGGTGTCATTTTCCACCAAGGATGCCAGGACTCTATTGAGTCCCACCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | GGAACCAGGTGGGACTCAATAGAGTCCTGGCATCCTTaGTGGAAAATGACACCCTCTAATGGAGTCCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GTRWDSIESWHP*WKMTPSNGVQA Trigger: GGCCTGGACTCCATTAGAGGGTGTCATTTTCCACCAAGGATGCCAGGACTCTATTGAGTCCCACCTGGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | CAGAAATGGCTCCCACACCCAGTGGTCACAGCCCCTTaGAAGTGGGGCACACGCTTACAATGGTACAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QKWLPHPVVTAP*KWGTRLQWYKK Trigger: TTTCTTGTACCATTGTAAGCGTGTGCCCCACTTCCAAGGGGCTGTGACCACTGGGTGTGGGAGCCATTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | GAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTaGGCTTGTTGGTCCCCGAAGCTATGGATGAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: ELTEGQTAVGTG*ACWSPKLWMKI Trigger: GATTTTCATCCATAGCTTCGGGGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | TCTACAGGCCCTTCCCTTCAGAACGCAGAGGCATTCTaGGTGAGGAAAATGGAGATGGCCCCTTTACATGGC | + |
|
Preference number: 3 (lower is better) Translates to: STGPSLQNAEAF*VRKMEMAPLHG Trigger: GCCATGTAAAGGGGCCATCTCCATTTTCCTCACCCAGAATGCCTCTGCGTTCTGAAGGGAAGGGCCTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAGCCTCTAAATTCTTACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCGGGCAGAAGAGTGGTTaGCTCTGCCACCTCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LEPLNSYTYSSASLLLERGQKSG*LCHLSP Trigger: AGGACTGAGGTGGCAGAGCAAACCACTCTTCTGCCC...GCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGGCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAGCCTCTAAATTCTTACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCATGGAGATGGCCGGCTaGGTTCTGGACTTGGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LEPLNSYTYSSASLLLERMEMAG*VLDLAL Trigger: CAGAGCCAAGTCCAGAACCAAGCCGGCCATCTCCAT...GCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGGCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTAAATTCTTACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCCATCTCGAGCTCCAGACCAGCTaGTTGCAATCCCATGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PLNSYTYSSASLLLERHLELQTS*LQSHGA Trigger: TGCCCCATGGGATTGCAACAAGCTGGTCTGGAGCTC...GAGATGGCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | TTGCACACCTGTGCTGTGAACCACCGGAGAACGAGCTaGCACTTTCAAAGTCACAACTTGAGCAAGCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LHTCAVNHRRTS*HFQSHNLSKHL Trigger: GAGGTGCTTGCTCAAGTTGTGACTTTGAAAGTGCCAGCTCGTTCTCCGGTGGTTCACAGCACAGGTGTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | GACTCTGGGGTCCCATCTTCCTGTCACCTTGCAGGATaGCACAAAGGACTCAGAGGTAACACCTATGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: DSGVPSSCHLAG*HKGLRGNTYVY Trigger: GTAGACATAGGTGTTACCTCTGAGTCCTTTGTGCCATCCTGCAAGGTGACAGGAAGATGGGACCCCAGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CAA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACATGGCAGAGTTTGAGTaGACAGAGGGTCAGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: KTLPLMIPGEIAQETPDNMAEFE*TEGQTA Trigger: TGCTGTCTGACCCTCTGTCAACTCAAACTCTGCCAT...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR TCA 72 bp | AACTCAGGTCCCCACAGTCCTCCACCATATCACAGATaGCAATGTCCTTTCCAGTCCACCAAGAGCTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NSGPHSPPPYHR*QCPFQSTKSSR Trigger: TCTGGAGCTCTTGGTGGACTGGAAAGGACATTGTCATCTGTGATATGGTGGAGGACTGTGGGGACCTGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR TCA 72 bp | CAACATGAGCTATGTGGTCATGAATACAATGCCATGTaGCCCACTCCAACTCAGACGCACCCCAAACCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QHELCGHEYNAM*PTPTQTHPKPS Trigger: GGAGGGTTTGGGGTGCGTCTGAGTTGGAGTGGGTCACATGGCATTGTATTCATGACCACATAGCTCATGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR GCA 72 bp | TTGGTGTCACTTAGACCTAATTCCAGCTTTCTTCAATaGTCCGCTCCTACTACCCCCGACACTGGAGAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LVSLRPNSSFLQ*SAPTTPDTGES Trigger: CGACTCTCCAGTGTCGGGGGTAGTAGGAGCGGAGCATTGAAGAAAGCTGGAATTAGGTCTAAGTGACACCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCAGTAGAAGGAATTTCTaGGTAGATGAACCAGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: FELTEGQTAVGTGWACWSSRRNF*VDEPGT Trigger: GGTTCCTGGTTCATCTACCAAGAAATTCCTTCTACT...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR GCA 72 bp | CTCATTGGAGCCTCTAAATTCTTACACTTACAGCTCTaGATCCCTCCTCCTGGAACGCCATCTCTCCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LIGASKFLHLQL*IPPPGTPSLLE Trigger: CTCAAGGAGAGATGGCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGGCTCCAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | GATGAACCAGGAACCAGGTGGGACTCAATAGAGTCCTaGCATCCTTGGTGGAAAATGACACCCTCTAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: DEPGTRWDSIES*HPWWKMTPSNG Trigger: TCCATTAGAGGGTGTCATTTTCCACCAAGGATGCCAGGACTCTATTGAGTCCCACCTGGTTCCTGGTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR TCA 72 bp | CATCCAACAAGGAGGGGTCTCCTGTTTAGAAACCCCTaGCCTTGGTGTCACTTAGACCTAATTCCAGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HPTRRGLLFRNP*PWCHLDLIPAF Trigger: GAAAGCTGGAATTAGGTCTAAGTGACACCAAGGTCAGGGGTTTCTAAACAGGAGACCCCTCCTTGTTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR TCA 72 bp | CACAGAACAAACAAGAAAGTCACTGAGGGGTCTCACTaGCCACCTCAGGGTGTTATTGCTTTGGAGTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HRTNKKVTEGSH*PPQGVIALESV Trigger: CACTGACTCCAAAGCAATAACACCCTGAGGTGGTCAGTGAGACCCCTCAGTGACTTTCTTGTTTGTTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CCA 72 bp | AAGGCTGTCAATACAGGCATCCCTTTGCTTGCTATTTaGGGTTCTTATGGGGGTCAGAGTAAAATCACGGGG | + |
|
Preference number: 3 (lower is better) Translates to: KAVNTGIPLLAI*GSYGGQSKITG Trigger: CCCCGTGATTTTACTCTGACCCCCATAAGAACCCCAAATAGCAAGCAAAGGGATGCCTGTATTGACAGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR GCA 72 bp | TTATTGCTTTGGAGTCAGTGCTCCTTGGTGCTATCATaGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLLWSQCSLVLS*SLSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATGATAGCACCAAGGAGCACTGACTCCAAAGCAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGGACCAGGCCGTTCCTGCTCCCCAAGAGGACACAGGGAAAGGTGGGTACACAGGGCCCCACGGTaGTCTCGAGGGACAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGPGRSCSPRGHRERWVHRAPR*SRGTAG Trigger: CCCAGCTGTCCCTCGAGAGCACCGTGGGGCCCTGTG...TACCCACCTTTCCCTGTGTCCTCTTGGGGAGCAGGAACGGCCTGGTCCTCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCACGGGCAGGCAGAAGGAGACCCATACTCCCCTCCAAGTGGGGAGCTCTGCAGCGGACCTGTGGCTaGGTCCACCATGGAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRAGRRRPILPSKWGALQRTCG*VHHGGG Trigger: ACCTCCTCCATGGTGGACCCAGCCACAGGTCCGCTG...CAGAGCTCCCCACTTGGAGGGGAGTATGGGTCTCCTTCTGCCTGCCCGTGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGGACCAGGCCGTTCCTGCTCCCCAAGAGGACACAGGGAAAGGTGGGTACTCTCGAGGGACAGCTaGGATGCCTGCCGAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGGPGRSCSPRGHRERWVLSRDS*DACRSS Trigger: GCTGCTTCGGCAGGCATCCCAGCTGTCCCTCGAGAG...TACCCACCTTTCCCTGTGTCCTCTTGGGGAGCAGGAACGGCCTGGTCCTCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGTAGCCAACCCACTGGGAAAGGGAAGGTCTCAGGGGTAGGAGGTGAAGGAAGGAGGCGGACAGGCTaGGGCGGCTCTGCGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KCSQPTGKGKVSGVGGEGRRRTG*GGSASA Trigger: AGCGCTCGCAGAGCCGCCTCAGCCTGTCCGCCTCCT...TCCTTCACCTCCTACCCCTGAGACCTTCCCTTTCCCAGTGGGTTGGCTACACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR GCA 90 bp | GCACCATGGAGATGGCCGGCTTGGTTCTGGACTTGGCTCTGGGCAGCGAGCTTCGCGGCCCACAAACTGTaGTGGTCCCATACTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: APWRWPAWFWTWLWAASFAAHKL*WSHTPQ Trigger: CTGGGGAGTATGGGACCAGCACAGTTTGTGGGCCGC...GAAGCTCGCTGCCCAGAGCCAAGTCCAGAACCAAGCCGGCCATCTCCATGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGGACCAGGCCGTTCCTGCTCCCCAAGAGGACACAGGGAAAGGTGGGTATGCACGGGAAGTAGATaGCGAGCGCCTCGAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGPGRSCSPRGHRERWVCTGSR*RAPRRR Trigger: CCTCCTTCGAGGCGCTCGCCATCTACTTCCCGTGCA...TACCCACCTTTCCCTGTGTCCTCTTGGGGAGCAGGAACGGCCTGGTCCTCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACGGCGGAGCGTCCGGCTaGGCATCTCCACGGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTLPLMIPGEIAQETPDNGGASG*ASPRPV Trigger: GACTGGCCGTGGAGATGCCCAGCCGGACGCTCCGCC...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCGACTCATGGCTGGCTTaGCGGAGCGTCCGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FELTEGQTAVGTGWACWSDSWLA*RSVRLG Trigger: GCCCAGCCGGACGCTCCGCCAAGCCAGCCATGAGTC...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGGACCAGGCCGTTCCTGCTCCCCAAGAGGACACAGGGAAAGGTGGGTACCAGCAGATAGGCCTTaGTATAGGCAGCTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGGPGRSCSPRGHRERWVPADRP*YRQLAV Trigger: CACTGCCAGCTGCCTATATCAAGGCCTATCTGCTGG...TACCCACCTTTCCCTGTGTCCTCTTGGGGAGCAGGAACGGCCTGGTCCTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGGACCAGGCCGTTCCTGCTCCCCAAGAGGACACAGGGAAAGGTGGGTAGTCTCTGTGCTTCTCTaGATGGCACCCTTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGGPGRSCSPRGHRERWVVSVLL*MAPFSL Trigger: GAGGCTGAAGGGTGCCATCCAGAGAAGCACAGAGAC...TACCCACCTTTCCCTGTGTCCTCTTGGGGAGCAGGAACGGCCTGGTCCTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR TCA 90 bp | GCACCATGGAGATGGCCGGCTTGGTTCTGGACTTGGCTCTGGGCAGCGAGCTTCTCCCCAGGAAGTCACTaGACTGGGCATCTGAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: APWRWPAWFWTWLWAASFSPGSH*TGHLKL Trigger: TAGCTTCAGATGCCCAGTTCAGTGACTTCCTGGGGA...GAAGCTCGCTGCCCAGAGCCAAGTCCAGAACCAAGCCGGCCATCTCCATGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | GTCGTTCCCTATGTGCAAGGTTCTGGAAACTCAGGTCCCCACAGTCCTCCACCATCTTCGAGCCTGGCTTaGCAGTCAGTCCCCGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVPYVQGSGNSGPHSPPPSSSLA*QSVPGP Trigger: AGGCCCGGGGACTGACTGCCAAGCCAGGCTCGAAGA...TGGTGGAGGACTGTGGGGACCTGAGTTTCCAGAACCTTGCACATAGGGAACGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR GCA 90 bp | ACAACCCAGCCTAAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGGACAGCTGGGATGCCTaGCGAAGCAGCGGACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTQPKTLPLMIPGEIAQEDSWDA*RSSGPV Trigger: CACAGGTCCGCTGCTTCGGCAGGCATCCCAGCTGTC...CTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTTAGGCTGGGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCCTGTGCTTCTCTGGATaGCACCCTTCAGCCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FELTEGQTAVGTGWACWSLCFSG*HPSASG Trigger: GCCGGAGGCTGAAGGGTGCCATCCAGAGAAGCACAG...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | GTCGTTCCCTATGTGCAAGGTTCTGGAAACTCAGGTCCCCACAGTCCTCCACCAGTGGTAGCCAGGGTCTaGCGGCCCACAAACTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VVPYVQGSGNSGPHSPPPVVARV*RPTNCA Trigger: AGCACAGTTTGTGGGCCGCCAGACCCTGGCTACCAC...TGGTGGAGGACTGTGGGGACCTGAGTTTCCAGAACCTTGCACATAGGGAACGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | GTCGTTCCCTATGTGCAAGGTTCTGGAAACTCAGGTCCCCACAGTCCTCCACCAAGCCCACGGCCAGGGTaGTCAAGTCCAGTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVPYVQGSGNSGPHSPPPSPRPG*SSPVPP Trigger: TGGAGGAACTGGACTTGACCACCCTGGCCGTGGGCT...TGGTGGAGGACTGTGGGGACCTGAGTTTCCAGAACCTTGCACATAGGGAACGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CAA 72 bp | ATTGGCACCATGGAGATGGCCGGCTTGGTTCTGGACTaGGCTCTGGGCAGCGAGCTTCCAAGGAGGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IGTMEMAGLVLD*ALGSELPRRQK Trigger: CTTTTGCCTCCTTGGAAGCTCGCTGCCCAGAGCCAAGTCCAGAACCAAGCCGGCCATCTCCATGGTGCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CAA 72 bp | CACTTGCTGGTAATTGGCACCATGGAGATGGCCGGCTaGGTTCTGGACTTGGCTCTGGGCAGCGAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLVIGTMEMAG*VLDLALGSELP Trigger: TGGAAGCTCGCTGCCCAGAGCCAAGTCCAGAACCAAGCCGGCCATCTCCATGGTGCCAATTACCAGCAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CAA 72 bp | AGTAGCTGCCGGAACCCAGTGCCGCAGGAAAGACACTaGCTGGTAATTGGCACCATGGAGATGGCCGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSCRNPVPQERH*LVIGTMEMAGL Trigger: CAAGCCGGCCATCTCCATGGTGCCAATTACCAGCAAGTGTCTTTCCTGCGGCACTGGGTTCCGGCAGCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR TCA 90 bp | TTGGAGCCTCTAAATTCTTACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCGTCCCCGGGCCTGGATaGTGTCCACCTCCAGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LEPLNSYTYSSASLLLERVPGPG*CPPPAD Trigger: GTCAGCTGGAGGTGGACATCATCCAGGCCCGGGGAC...GCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGGCTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR GCA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCCCTCCGGCTGTCTGCTaGGTCCTCATCATCGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FELTEGQTAVGTGWACWSPPAVC*VLIIEG Trigger: TCCTTCGATGATGAGGACGCAGCAGACAGCCGGAGG...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR GCA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCCCAGTCCCGTCTCTGTaGTTCTCTGGATGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: FELTEGQTAVGTGWACWSPVPSL*FSGWHP Trigger: AGGGTGCCATCCAGAGAAGCACAGAGACGGGACTGG...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR GCA 90 bp | GCACCATGGAGATGGCCGGCTTGGTTCTGGACTTGGCTCTGGGCAGCGAGCTTCAGCCATAGCTGTTCATaGTGTCCTCGATGGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: APWRWPAWFWTWLWAASFSHSCS*CPRWTH Trigger: ATGAGTCCATCGAGGACAGCATGAACAGCTATGGCT...GAAGCTCGCTGCCCAGAGCCAAGTCCAGAACCAAGCCGGCCATCTCCATGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | ACAACCCAGCCTAAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGCAGTGTCTTCGAGCCTaGCTTGGCAGTCAGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TTQPKTLPLMIPGEIAQEQCLRA*LGSQSP Trigger: CGGGGACTGACTGCCAAGCCAGGCTCGAAGACACTG...CTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTTAGGCTGGGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | GTCGTTCCCTATGTGCAAGGTTCTGGAAACTCAGGTCCCCACAGTCCTCCACCACCACCATGGAGGAGGTaGGGAAGAGCTTGTACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVPYVQGSGNSGPHSPPPPPWRR*GRACTS Trigger: GCTGGTACAAGCTCTTCCCCACCTCCTCCATGGTGG...TGGTGGAGGACTGTGGGGACCTGAGTTTCCAGAACCTTGCACATAGGGAACGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR TCA 90 bp | CCTCTAAATTCTTACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCCATCTCCTCGAGCCACGCCCATaGACTGCTTCCGCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PLNSYTYSSASLLLERHLLEPRP*TASAPS Trigger: GGATGGAGCGGAAGCAGTTCATGGGCGTGGCTCGAG...GAGATGGCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR GCA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACCCCCACACGATTACCTaGAGGACTTTGCCCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTLPLMIPGEIAQETPDNPHTIT*RTLPWG Trigger: TCCCCAGGGCAAAGTCCTGCAGGTAATCGTGTGGGG...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGGACCAGGCCGTTCCTGCTCCCCAAGAGGACACAGGGAAAGGTGGGTAAGGAAGTCACTGAACTaGGCATCTGAAGCTAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: PGGPGRSCSPRGHRERWVRKSLN*ASEARQ Trigger: TTGTCTAGCTTCAGATGCCCAGTTCAGTGACTTCCT...TACCCACCTTTCCCTGTGTCCTCTTGGGGAGCAGGAACGGCCTGGTCCTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR CCA 90 bp | TTGGAGCCTCTAAATTCTTACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCGTCAGTCCCCGGGCCTaGATGATGTCCACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEPLNSYTYSSASLLLERVSPRA*MMSTSS Trigger: GCTGGAGGTGGACATCATCCAGGCCCGGGGACTGAC...GCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGGCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CAA 72 bp | AGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTaGGTCCCCGAAGCTATGGATGAAAATCACTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGSDSSGNRLGL*VPEAMDENHSA Trigger: GGCAGAGTGATTTTCATCCATAGCTTCGGGGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CAA 72 bp | AGCCCAAGGACTCTGGGGTCCCATCTTCCTGTCACCTaGCAGGATGGCACAAAGGACTCAGAGGTAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: SPRTLGSHLPVT*QDGTKDSEVTP Trigger: AGGTGTTACCTCTGAGTCCTTTGTGCCATCCTGCAAGGTGACAGGAAGATGGGACCCCAGAGTCCTTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGTAGCCAACCCACTGGGAAAGGGAAGGTCTCAGGGGTAGGAGGTGAAGGATTACCTGCAGGACTTTaGCCTGGGGACTCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KCSQPTGKGKVSGVGGEGLPAGL*PGDSQE Trigger: TTCCTGAGAGTCCCCAGGGCAAAGTCCTGCAGGTAA...TCCTTCACCTCCTACCCCTGAGACCTTCCCTTTCCCAGTGGGTTGGCTACACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CAA 72 bp | ACAGAAATGGCTCCCACACCCAGTGGTCACAGCCCCTaGGAAGTGGGGCACACGCTTACAATGGTACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEMAPTPSGHSP*EVGHTLTMVQE Trigger: TTCTTGTACCATTGTAAGCGTGTGCCCCACTTCCAAGGGGCTGTGACCACTGGGTGTGGGAGCCATTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| 3UTR CAA 72 bp | GACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTaGTTGGTCCCCGAAGCTATGGATGAAAATCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: DRGSDSSGNRLG*LVPEAMDENHS Trigger: AGAGTGATTTTCATCCATAGCTTCGGGGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR TCA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCGTTAAGGTTGCCCTCTaGGCCATAGCTGTTCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FELTEGQTAVGTGWACWSVKVAL*AIAVHA Trigger: AGCATGAACAGCTATGGCTCAGAGGGCAACCTTAAC...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
||
| CDS-3UTR GCA 90 bp | TTTGAGTTGACAGAGGGTCAGACAGCAGTGGGAACAGGCTGGGCTTGTTGGTCCCATCGAAGGAGTTCATaGACGGGAAGTAGATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FELTEGQTAVGTGWACWSHRRSS*TGSRWR Trigger: TCGCCATCTACTTCCCGTGCATGAACTCCTTCGATG...GGACCAACAAGCCCAGCCTGTTCCCACTGCTGTCTGACCCTCTGTCAACTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS-3UTR GCA 90 bp | ATGGGAGAATTTCCAAGTAGAAGGAATTTCTTGGTAGATGAACCAGGAACCAGGGCCACGCCCATGAACTaGTTCCGCTCCATCCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: MGEFPSRRNFLVDEPGTRATPMN*FRSIRP Trigger: CGGGCGGATGGAGCGGAAGCAGTTCATGGGCGTGGC...CCTGGTTCCTGGTTCATCTACCAAGAAATTCCTTCTACTTGGAAATTCTCCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS-3UTR CCA 90 bp | TTGGAGCCTCTAAATTCTTACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCTCATGCTGTCCTCGATaGACTCATGGCTGGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LEPLNSYTYSSASLLLERSCCPR*THGWLG Trigger: GCCAAGCCAGCCATGAGTCCATCGAGGACAGCATGA...GCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGGCTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS-3UTR GCA 90 bp | CCTCTAAATTCTTACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCCATCTCACGGGTCCAGTGACTTaGGGGCCACTTTGGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: PLNSYTYSSASLLLERHLTGPVT*GPLWFS Trigger: AGAAAACCAAAGTGGCCCGCAAGTCACTGGACCCGT...GAGATGGCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS-3UTR CCA 90 bp | TTGGAGCCTCTAAATTCTTACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCTGCAGGACTTTGCCCTaGGGACTCTCAGGAAACAGA | + |
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Preference number: 4 (lower is better) Translates to: LEPLNSYTYSSASLLLERCRTLP*GLSGNR Trigger: TCTGTTTCCTGAGAGTCCCCAGGGCAAAGTCCTGCA...GCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGGCTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| 3UTR CAA 72 bp | CACCTCAGGGTGTTATTGCTTTGGAGTCAGTGCTCCTaGGTGCTATCATGCTCTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: HLRVLLLWSQCS*VLSCSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGCATGATAGCACCAAGGAGCACTGACTCCAAAGCAATAACACCCTGAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS-3UTR CCA 90 bp | CCTCTAAATTCTTACACTTACAGCTCTGCATCCCTCCTCCTGGAACGCCATCTCACTTGCGGGCCACTTTaGTTTTCTTCTTGGCAATGC | + |
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Preference number: 4 (lower is better) Translates to: PLNSYTYSSASLLLERHLTCGPL*FSSWQC Trigger: GCATTGCCAAGAAGAAAACCAAAGTGGCCCGCAAGT...GAGATGGCGTTCCAGGAGGAGGGATGCAGAGCTGTAAGTGTAAGAATTTAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS-3UTR CCA 90 bp | ATGGGAGAATTTCCAAGTAGAAGGAATTTCTTGGTAGATGAACCAGGAACCAGGGCCCACAAACTGTGCTaGTCCCATACTCCCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: MGEFPSRRNFLVDEPGTRAHKLC*SHTPQE Trigger: TTCCTGGGGAGTATGGGACCAGCACAGTTTGTGGGC...CCTGGTTCCTGGTTCATCTACCAAGAAATTCCTTCTACTTGGAAATTCTCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS GCA 90 bp | TCGCCACAGGGCCCCACGGTGCTCTCGAGGGACAGCTGGGATGCCTaGCGAAGCAGCGGACCTGTGGCTGGGTCCACCATGGAGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SPQGPTVLSRDSWDA*RSSGPVAGSTMEEV Trigger: CACCTCCTCCATGGTGGACCCAGCCACAGGTCCGCTGCTTCGGCAGGCATCCCAGCTGTCCCTCGAGAGCACCGTGGGGCCCTGTGGCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS-3UTR CAA 90 bp | CCTGGAGGACCAGGCCGTTCCTGCTCCCCAAGAGGACACAGGGAAAGGTGGGTAGTCTTCGAGCCTGGCTaGGCAGTCAGTCCCCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: PGGPGRSCSPRGHRERWVVFEPG*AVSPRA Trigger: GGCCCGGGGACTGACTGCCAAGCCAGGCTCGAAGAC...TACCCACCTTTCCCTGTGTCCTCTTGGGGAGCAGGAACGGCCTGGTCCTCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS-3UTR CAA 90 bp | GCACCATGGAGATGGCCGGCTTGGTTCTGGACTTGGCTCTGGGCAGCGAGCTTCGAGGTGGGGAAGAGCTaGTACCAGCCCACGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: APWRWPAWFWTWLWAASFEVGKS*YQPTAR Trigger: CCTGGCCGTGGGCTGGTACAAGCTCTTCCCCACCTC...GAAGCTCGCTGCCCAGAGCCAAGTCCAGAACCAAGCCGGCCATCTCCATGGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS-3UTR CAA 90 bp | AAAACCCTTCCGCTCATGATCCCTGGAGAAATTGCCCAGGAGACCCCAGACAACGGACTCATGGCTGGCTaGGCGGAGCGTCCGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: KTLPLMIPGEIAQETPDNGLMAG*AERPAG Trigger: CCCAGCCGGACGCTCCGCCAAGCCAGCCATGAGTCC...GTTGTCTGGGGTCTCCTGGGCAATTTCTCCAGGGATCATGAGCGGAAGGGTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS CCA 90 bp | TGCAAGCCAATCTCCACATCCCCCATGGGTGTGGTAGCCAGGGTCTaGCGGCCCACAAACTGTGCTGGTCCCATACTCCCCAGGAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: CKPISTSPMGVVARV*RPTNCAGPILPRKS Trigger: TGACTTCCTGGGGAGTATGGGACCAGCACAGTTTGTGGGCCGCCAGACCCTGGCTACCACACCCATGGGGGATGTGGAGATTGGCTTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS CCA 90 bp | ACCTGCAGGACTTTGCCCTGGGGACTCTCAGGAAACAGAAGCACCTaGTTGTACAACGGGTCCAGTGACTTGCGGGCCACTTTGGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: TCRTLPWGLSGNRST*LYNGSSDLRATLVF Trigger: GAAAACCAAAGTGGCCCGCAAGTCACTGGACCCGTTGTACAACCAGGTGCTTCTGTTTCCTGAGAGTCCCCAGGGCAAAGTCCTGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS-3UTR CAA 90 bp | AAGTGTAGCCAACCCACTGGGAAAGGGAAGGTCTCAGGGGTAGGAGGTGAAGGAATTACCTGCAGGACTTaGCCCTGGGGACTCTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: KCSQPTGKGKVSGVGGEGITCRT*PWGLSG Trigger: TCCTGAGAGTCCCCAGGGCAAAGTCCTGCAGGTAAT...TCCTTCACCTCCTACCCCTGAGACCTTCCCTTTCCCAGTGGGTTGGCTACACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS-3UTR CAA 90 bp | AAGTGTAGCCAACCCACTGGGAAAGGGAAGGTCTCAGGGGTAGGAGGTGAAGGAGACTTGCGGGCCACTTaGGTTTTCTTCTTGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: KCSQPTGKGKVSGVGGEGDLRAT*VFFLAM Trigger: CATTGCCAAGAAGAAAACCAAAGTGGCCCGCAAGTC...TCCTTCACCTCCTACCCCTGAGACCTTCCCTTTCCCAGTGGGTTGGCTACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS GCA 90 bp | TCTCAGGAAACAGAAGCACCTGGTTGTACAACGGGTCCAGTGACTTaGGGGCCACTTTGGTTTTCTTCTTGGCAATGCAGACACCATTCT | + |
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Preference number: 5 (lower is better) Translates to: SQETEAPGCTTGPVT*GPLWFSSWQCRHHS Trigger: AGAATGGTGTCTGCATTGCCAAGAAGAAAACCAAAGTGGCCCGCAAGTCACTGGACCCGTTGTACAACCAGGTGCTTCTGTTTCCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS GCA 72 bp | GGCCCCACGGTGCTCTCGAGGGACAGCTGGGATGCCTaGCGAAGCAGCGGACCTGTGGCTGGGTCCACCATG | + |
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Preference number: 6 (lower is better) Translates to: GPTVLSRDSWDA*RSSGPVAGSTM Trigger: CATGGTGGACCCAGCCACAGGTCCGCTGCTTCGGCAGGCATCCCAGCTGTCCCTCGAGAGCACCGTGGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS GCA 72 bp | ACAGGGCCCCACGGTGCTCTCGAGGGACAGCTGGGATaGCTGCCGAAGCAGCGGACCTGTGGCTGGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: TGPHGALEGQLG*LPKQRTCGWVH Trigger: GTGGACCCAGCCACAGGTCCGCTGCTTCGGCAGGCATCCCAGCTGTCCCTCGAGAGCACCGTGGGGCCCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS CCA 72 bp | CGATGGACTCATGGCTGGCTTGGCGGAGCGTCCGGCTaGGCATCTCCACGGCCAGTCCCGTCTCTGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RWTHGWLGGASG*ASPRPVPSLCF Trigger: GAAGCACAGAGACGGGACTGGCCGTGGAGATGCCCAGCCGGACGCTCCGCCAAGCCAGCCATGAGTCCATCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS CAA 72 bp | GCTGTTCATGCTGTCCTCGATGGACTCATGGCTGGCTaGGCGGAGCGTCCGGCTGGGCATCTCCACGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: AVHAVLDGLMAG*AERPAGHLHGQ Trigger: CTGGCCGTGGAGATGCCCAGCCGGACGCTCCGCCAAGCCAGCCATGAGTCCATCGAGGACAGCATGAACAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS CCA 72 bp | CTGTTCATGCTGTCCTCGATGGACTCATGGCTGGCTTaGCGGAGCGTCCGGCTGGGCATCTCCACGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: LFMLSSMDSWLA*RSVRLGISTAS Trigger: ACTGGCCGTGGAGATGCCCAGCCGGACGCTCCGCCAAGCCAGCCATGAGTCCATCGAGGACAGCATGAACAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS CCA 72 bp | CAGCTGGGATGCCTGCCGAAGCAGCGGACCTGTGGCTaGGTCCACCATGGAGGAGGTGGGGAAGAGCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: QLGCLPKQRTCG*VHHGGGGEELV Trigger: TACAAGCTCTTCCCCACCTCCTCCATGGTGGACCCAGCCACAGGTCCGCTGCTTCGGCAGGCATCCCAGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS TCA 72 bp | AGTCCAGTTCCTCCAGCAGGACTCGAGCCACGCCCATaGACTGCTTCCGCTCCATCCGCCCGTAGTTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SPVPPAGLEPRP*TASAPSARSFP Trigger: GGGGAAACTACGGGCGGATGGAGCGGAAGCAGTTCATGGGCGTGGCTCGAGTCCTGCTGGAGGAACTGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS CCA 72 bp | CATAGCTGTTCATGCTGTCCTCGATGGACTCATGGCTaGCTTGGCGGAGCGTCCGGCTGGGCATCTCCACGG | + |
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Preference number: 6 (lower is better) Translates to: HSCSCCPRWTHG*LGGASGWASPR Trigger: CCGTGGAGATGCCCAGCCGGACGCTCCGCCAAGCCAGCCATGAGTCCATCGAGGACAGCATGAACAGCTATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS CCA 72 bp | ATCTCCACATCCCCCATGGGTGTGGTAGCCAGGGTCTaGCGGCCCACAAACTGTGCTGGTCCCATACTCCCC | + |
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Preference number: 6 (lower is better) Translates to: ISTSPMGVVARV*RPTNCAGPILP Trigger: GGGGAGTATGGGACCAGCACAGTTTGTGGGCCGCCAGACCCTGGCTACCACACCCATGGGGGATGTGGAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS CAA 72 bp | TTGCCCTGGGGACTCTCAGGAAACAGAAGCACCTGGTaGTACAACGGGTCCAGTGACTTGCGGGCCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: LPWGLSGNRSTW*YNGSSDLRATL Trigger: CAAAGTGGCCCGCAAGTCACTGGACCCGTTGTACAACCAGGTGCTTCTGTTTCCTGAGAGTCCCCAGGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS CAA 90 bp | TGCAGGACTTTGCCCTGGGGACTCTCAGGAAACAGAAGCACCTGGTaGTACAACGGGTCCAGTGACTTGCGGGCCACTTTGGTTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CRTLPWGLSGNRSTW*YNGSSDLRATLVFF Trigger: GAAGAAAACCAAAGTGGCCCGCAAGTCACTGGACCCGTTGTACAACCAGGTGCTTCTGTTTCCTGAGAGTCCCCAGGGCAAAGTCCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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| CDS CAA 90 bp | CTCTCAGGAAACAGAAGCACCTGGTTGTACAACGGGTCCAGTGACTaGCGGGCCACTTTGGTTTTCTTCTTGGCAATGCAGACACCATTC | + |
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Preference number: 6 (lower is better) Translates to: LSGNRSTWLYNGSSD*RATLVFFLAMQTPF Trigger: GAATGGTGTCTGCATTGCCAAGAAGAAAACCAAAGTGGCCCGCAAGTCACTGGACCCGTTGTACAACCAGGTGCTTCTGTTTCCTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044734.3 |
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