Pregenerated sensors for RIMKLA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048899Ensembl transcript IDs: ENSMUST00000049994.8
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTTCCCTGTCTACAGAATGGGAAGATGGAGACACAGAGCTCAGGTaGCCAGCTGTGTTGGGAGAGCCAGGGCCAGACTCCCGCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: FSLSTEWEDGDTELR*PAVLGEPGPDSRSA Trigger: TGCAGAGCGGGAGTCTGGCCCTGGCTCTCCCAACACAGCTGGGCACCTGAGCTCTGTGTCTCCATCTTCCCATTCTGTAGACAGGGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CCA 90 bp | CAGAATGGGAAGATGGAGACACAGAGCTCAGGTGCCCAGCTGTGTTaGGAGAGCCAGGGCCAGACTCCCGCTCTGCATCCCTTTGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: QNGKMETQSSGAQLC*ESQGQTPALHPFVL Trigger: AAGAACAAAGGGATGCAGAGCGGGAGTCTGGCCCTGGCTCTCCCAACACAGCTGGGCACCTGAGCTCTGTGTCTCCATCTTCCCATTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR TCA 90 bp | GGCCAGCTGTGGTATGGAAATCCCAGAGTGGGGCTAGGATCCAGATaGGAGTCAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: GQLWYGNPRVGLGSR*ESAFSASRQAVLGN Trigger: ATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTGACTCTCATCTGGATCCTAGCCCCACTCTGGGATTTCCATACCACAGCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CCA 90 bp | CCCGCTCTGCATCCCTTTGTTCTTTCCAACAAGTGTAGGCAGCTGTaGCAAGTATGGCGGGGCCACAGAGCTGAGACTCAAGGATGTGAC | + |
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Preference number: 1 (lower is better) Translates to: PALHPFVLSNKCRQL*QVWRGHRAETQGCD Trigger: GTCACATCCTTGAGTCTCAGCTCTGTGGCCCCGCCATACTTGCCACAGCTGCCTACACTTGTTGGAAAGAACAAAGGGATGCAGAGCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR GCA 90 bp | ACTACACTGGGAGGTGTCTGTTACCTCTTCCCAGACAGACAGCTGTaGTTTGTAACTCACTTCAGCCTCAGAGTGCACCATGAGGTAAAT | + |
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Preference number: 1 (lower is better) Translates to: TTLGGVCYLFPDRQL*FVTHFSLRVHHEVN Trigger: ATTTACCTCATGGTGCACTCTGAGGCTGAAGTGAGTTACAAAGCACAGCTGTCTGTCTGGGAAGAGGTAACAGACACCTCCCAGTGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CCA 90 bp | TCTATCAGTGTTCTGATATCTATCAGCTTCTCAGGGGCCAATGCCTaGCTCCCATCTGACCTCTTCCAGCAGGAACAGAATATAACTAGC | + |
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Preference number: 1 (lower is better) Translates to: SISVLISISFSGANA*LPSDLFQQEQNITS Trigger: GCTAGTTATATTCTGTTCCTGCTGGAAGAGGTCAGATGGGAGCCAGGCATTGGCCCCTGAGAAGCTGATAGATATCAGAACACTGATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR TCA 90 bp | ATAGACACACACTCAGATTACAGTTTAGTGGCATGCACCCAGGGGTaGGACTGCATAGGAACTATAGCAGTGAGGTATGACTTCTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: IDTHSDYSLVACTQG*DCIGTIAVRYDFCH Trigger: GTGACAGAAGTCATACCTCACTGCTATAGTTCCTATGCAGTCTCACCCCTGGGTGCATGCCACTAAACTGTAATCTGAGTGTGTGTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CCA 90 bp | CTTCCTTTTTCAACTCTCTCAGGAGCAATGAAAAACACACTACACTaGGAGGTGTCTGTTACCTCTTCCCAGACAGACAGCTGTGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: LPFSTLSGAMKNTLH*EVSVTSSQTDSCAL Trigger: CAAAGCACAGCTGTCTGTCTGGGAAGAGGTAACAGACACCTCCCAGTGTAGTGTGTTTTTCATTGCTCCTGAGAGAGTTGAAAAAGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR TCA 90 bp | AGGTGCATGAAGCTGCTAGAGCTGACAATAGGTAAAGCAAGGGTGTaGATTCTGAGAGACAAAGCCATCTGTAGAAATCCCCTGTTACGA | + |
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Preference number: 1 (lower is better) Translates to: RCMKLLELTIGKARV*ILRDKAICRNPLLR Trigger: TCGTAACAGGGGATTTCTACAGATGGCTTTGTCTCTCAGAATTCACACCCTTGCTTTACCTATTGTCAGCTCTAGCAGCTTCATGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR TCA 90 bp | TTCAAGATGTTGCTACAAGACAGTGGAAAGACCACACACACCCCCTaGATCTATATTACAGAGGAAGACTTGGTGTTGGCGTACACGAGT | + |
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Preference number: 1 (lower is better) Translates to: FKMLLQDSGKTTHTP*IYITEEDLVLAYTS Trigger: ACTCGTGTACGCCAACACCAAGTCTTCCTCTGTAATATAGATTCAGGGGGTGTGTGTGGTCTTTCCACTGTCTTGTAGCAACATCTTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR TCA 90 bp | CCAAGAATACATAGCCTCTTCCTTTTTCAACTCTCTCAGGAGCAATaGAAAACACACTACACTGGGAGGTGTCTGTTACCTCTTCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: PRIHSLFLFQLSQEQ*KTHYTGRCLLPLPR Trigger: TCTGGGAAGAGGTAACAGACACCTCCCAGTGTAGTGTGTTTTTCATTGCTCCTGAGAGAGTTGAAAAAGGAAGAGGCTATGTATTCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR GCA 90 bp | AAACTCCGCCTCTACCATTTCTTCCAGGGGAAAGATCTCATCTACTaGTTAAAGAGTTATAAAGGAAAGCACTTGATATCATGTCTACAA | + |
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Preference number: 1 (lower is better) Translates to: KLRLYHFFQGKDLIY*LKSYKGKHLISCLQ Trigger: TTGTAGACATGATATCAAGTGCTTTCCTTTATAACTCTTTAAGCAGTAGATGAGATCTTTCCCCTGGAAGAAATGGTAGAGGCGGAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR GCA 90 bp | CCAACTCACATTTCTAGAATCTTCCTTGGAAATTGTGAACTTAGATaGTTCTTCAGGATGGGCAAATCTTTGTCCTTTATGACAGGTCTA | + |
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Preference number: 1 (lower is better) Translates to: PTHISRIFLGNCELR*FFRMGKSLSFMTGL Trigger: TAGACCTGTCATAAAGGACAAAGATTTGCCCATCCTGAAGAAGCATCTAAGTTCACAATTTCCAAGGAAGATTCTAGAAATGTGAGTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CAA 90 bp | AGCTGTGTTGGGAGAGCCAGGGCCAGACTCCCGCTCTGCATCCCTTaGTTCTTTCCAACAAGTGTAGGCAGCTGTGGCAAGTATGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: SCVGRARARLPLCIP*FFPTSVGSCGKYGG Trigger: CCCGCCATACTTGCCACAGCTGCCTACACTTGTTGGAAAGAACAAAGGGATGCAGAGCGGGAGTCTGGCCCTGGCTCTCCCAACACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGCCAGGGCCAGACTCCCGCTCTGCATCCCTTTGTTCTTTCCAACAAGTGGGGCTAGGATCCAGATaGGAGTCAGCTTTCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GEPGPDSRSASLCSFQQVGLGSR*ESAFSA Trigger: GGCAGAGAAAGCTGACTCTCATCTGGATCCTAGCCC...CACTTGTTGGAAAGAACAAAGGGATGCAGAGCGGGAGTCTGGCCCTGGCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCACAGAGCTGAGACTCAAGGATGTGACCATGGCCAGCTGTGGTATGGAAATGAGGAGCATCTCGCCTaGCTGCACACACCTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: GHRAETQGCDHGQLWYGNEEHLA*LHTPLP Trigger: AGGCAGAGGTGTGTGCAGGCAGGCGAGATGCTCCTC...ATTTCCATACCACAGCTGGCCATGGTCACATCCTTGAGTCTCAGCTCTGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGATGGAGACACAGAGCTCAGGTGCCCAGCTGTGTTGGGAGAGCCAGGGCCACAAAGGCAGCAAAGGTaGATGAAGCTGCTAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: EDGDTELRCPAVLGEPGPQRQQR*MKLLEL Trigger: CAGCTCTAGCAGCTTCATGCACCTTTGCTGCCTTTG...TGGCCCTGGCTCTCCCAACACAGCTGGGCACCTGAGCTCTGTGTCTCCATCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGCCAGGGCCAGACTCCCGCTCTGCATCCCTTTGTTCTTTCCAACAAGTGGCATGCACCCAGGGGTaGGACTGCATAGGAACTATA | + |
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Preference number: 2 (lower is better) Translates to: GEPGPDSRSASLCSFQQVACTQG*DCIGTI Trigger: TATAGTTCCTATGCAGTCTCACCCCTGGGTGCATGC...CACTTGTTGGAAAGAACAAAGGGATGCAGAGCGGGAGTCTGGCCCTGGCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CAA 90 bp | CAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACACCGTaGGCAGACATCTCTGCCAGCTGGGAAATGGGCCTCTTTGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: QLSLPLGRQFWAITP*ADISASWEMGLFGK Trigger: TTTGCCAAAGAGGCCCATTTCCCAGCTGGCAGAGATGTCTGCCAACGGTGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACACCGTTGGCAGACATCCCTCCATCTCCTGCATaGGAGAACGGTGTTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LSLPLGRQFWAITPLADIPPSPA*ENGVSR Trigger: CCTGGAAACACCGTTCTCTCATGCAGGAGATGGAGG...GATGTCTGCCAACGGTGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGATGGAGACACAGAGCTCAGGTGCCCAGCTGTGTTGGGAGAGCCAGGGCCAAACTCGGGGTGGATTTaGCCATTGCTTGTTTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: EDGDTELRCPAVLGEPGPNSGWI*PLLVLS Trigger: ACTCAAAACAAGCAATGGCCAAATCCACCCCGAGTT...TGGCCCTGGCTCTCCCAACACAGCTGGGCACCTGAGCTCTGTGTCTCCATCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGCCAGGGCCAGACTCCCGCTCTGCATCCCTTTGTTCTTTCCAACAAGTGTTTGGCAAAGGAATCTaGAAACACTCCGAGCCGCTC | + |
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Preference number: 2 (lower is better) Translates to: GEPGPDSRSASLCSFQQVFGKGI*KHSEPL Trigger: GAGCGGCTCGGAGTGTTTCCAGATTCCTTTGCCAAA...CACTTGTTGGAAAGAACAAAGGGATGCAGAGCGGGAGTCTGGCCCTGGCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACACCGTTGGCAGACATCGCAACATGGACTCAGTaGCTTAAAGCCCCACCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LSLPLGRQFWAITPLADIATWTQ*LKAPPF Trigger: GAAGGGTGGGGCTTTAAGGCACTGAGTCCATGTTGC...GATGTCTGCCAACGGTGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGATGAGAGTCAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACAACGAAGCAGGACACATaGCAACCGGCGAGGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: PDESQLSLPLGRQFWAITTKQDT*QPARSK Trigger: CTTTGACCTCGCCGGTTGGCATGTGTCCTGCTTCGT...TGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTGACTCTCATCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGCCAGGGCCAGACTCCCGCTCTGCATCCCTTTGTTCTTTCCAACAAGTGAGTTATGAGGCCTCTTaGCTCTCGGAATTGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: GEPGPDSRSASLCSFQQVSYEAS*LSELMA Trigger: AGCCATCAATTCCGAGAGGCAAGAGGCCTCATAACT...CACTTGTTGGAAAGAACAAAGGGATGCAGAGCGGGAGTCTGGCCCTGGCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGCCAGGGCCAGACTCCCGCTCTGCATCCCTTTGTTCTTTCCAACAAGTGAGTGCAGGAATTATGTaGCTATTGGGTAGTGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: GEPGPDSRSASLCSFQQVSAGIM*LLGSGA Trigger: GGCACCACTACCCAATAGGCACATAATTCCTGCACT...CACTTGTTGGAAAGAACAAAGGGATGCAGAGCGGGAGTCTGGCCCTGGCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR TCA 90 bp | TCTACAATAGCCCACTCACCCCTCCACAAATACCCAAGTCTCTCCGATTTGGAAAATGTGGTAAGACGGTaGCCGGGGGAAGCAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: STIAHSPLHKYPSLSDLENVVRR*PGEAER Trigger: CCTCTCTGCTTCCCCCGGTCACCGTCTTACCACATT...TTCCAAATCGGAGAGACTTGGGTATTTGTGGAGGGGTGAGTGGGCTATTGTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGATGAGAGTCAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACAAGATGCATTTCCAGCTaGGGCCAAAGGCAGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PDESQLSLPLGRQFWAITRCISS*GQRQQR Trigger: CCTTTGCTGCCTTTGGCCTCAGCTGGAAATGCATCT...TGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTGACTCTCATCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGATGGAGACACAGAGCTCAGGTGCCCAGCTGTGTTGGGAGAGCCAGGGCCAGAAAGTCTATGGTGTTaGATTCTAGGGCACAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: EDGDTELRCPAVLGEPGPESLWC*ILGHKK Trigger: TTTCTTGTGCCCTAGAATGCAACACCATAGACTTTC...TGGCCCTGGCTCTCCCAACACAGCTGGGCACCTGAGCTCTGTGTCTCCATCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCACAAATACCCAAGTCTCTCCGATTTGGAAAAATGGGTAAGACCAGGTCCACTGGCTTCCAGATaGCAAGTGGGCAGAGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: PLHKYPSLSDLEKWVRPGPLASR*QVGRVH Trigger: ATGGACTCTGCCCACTTGTCATCTGGAAGCCAGTGG...ACCTGGTCTTACCCATTTTTCCAAATCGGAGAGACTTGGGTATTTGTGGAGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGATGAGAGTCAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACATCTGCCTCCATCTCCTaGATGAGAGAACGGTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: PDESQLSLPLGRQFWAITSASIS*MRERCF Trigger: GAAACACCGTTCTCTCATGCAGGAGATGGAGGCAGA...TGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTGACTCTCATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGATGAGAGTCAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACATATAGCAGTGAGGTATaGCTTCTGTCACATGGGACC | + |
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Preference number: 2 (lower is better) Translates to: PDESQLSLPLGRQFWAITYSSEV*LLSHGT Trigger: GGTCCCATGTGACAGAAGTCATACCTCACTGCTATA...TGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTGACTCTCATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCACAAATACCCAAGTCTCTCCGATTTGGAAAAATGGGTAAGACCAGGTCCAGGCACAGCAACATaGACTCAGTGCCTTAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: PLHKYPSLSDLEKWVRPGPGTAT*TQCLKA Trigger: GGCTTTAAGGCACTGAGTCCATGTTGCTGTGCCTGG...ACCTGGTCTTACCCATTTTTCCAAATCGGAGAGACTTGGGTATTTGTGGAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGATGAGAGTCAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACACTTCCAGATGACAAGTaGGCAGAGTCCATTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: PDESQLSLPLGRQFWAITLPDDK*AESIEK Trigger: CTTCTCAATGGACTCTGCCCACTTGTCATCTGGAAG...TGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTGACTCTCATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR TCA 90 bp | TCTACAATAGCCCACTCACCCCTCCACAAATACCCAAGTCTCTCCGATTTGGAAGTGGGCAGAGTCCATTaGGAAGGAAAGTCTATGGTG | + |
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Preference number: 2 (lower is better) Translates to: STIAHSPLHKYPSLSDLEVGRVH*EGKSMV Trigger: CACCATAGACTTTCCTTCTCAATGGACTCTGCCCAC...TTCCAAATCGGAGAGACTTGGGTATTTGTGGAGGGGTGAGTGGGCTATTGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCACTGCCTTGGCAGGTAGCAGGAGTTGTGTGTGTGTGTATGTATGTAGGGAGAAGGAAAGTCTATaGTGTTGCATTCTAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: LGTALAGSRSCVCVYVCREKESL*CCILGH Trigger: GTGCCCTAGAATGCAACACCATAGACTTTCCTTCTC...CCTACATACATACACACACACACAACTCCTGCTACCTGCCAAGGCAGTGCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR CCA 90 bp | TCTACAATAGCCCACTCACCCCTCCACAAATACCCAAGTCTCTCCGATTTGGAAGTAAGACCAGGTTCCTaGAGTCTGGATAACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: STIAHSPLHKYPSLSDLEVRPGS*SLDNRS Trigger: GCTCCTGTTATCCAGACTCCAGGAACCTGGTCTTAC...TTCCAAATCGGAGAGACTTGGGTATTTGTGGAGGGGTGAGTGGGCTATTGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACACCGTTGGCAGACATCATGACTTCTGTCACATaGGACCAACATTTTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LSLPLGRQFWAITPLADIMTSVT*DQHFQV Trigger: CACCTGAAAATGTTGGTCCCATGTGACAGAAGTCAT...GATGTCTGCCAACGGTGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACACCGTTGGCAGACATCGTTAGACCTTCTATATaGAGAAACAAAACTCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: LSLPLGRQFWAITPLADIVRPSI*RNKTPP Trigger: AGGCGGAGTTTTGTTTCTGCATATAGAAGGTCTAAC...GATGTCTGCCAACGGTGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR CCA 90 bp | AGATTACAGTTTAGTGGCATGCACCCAGGGGTGAGACTGCATAGGAACTATAGCGTGGTAAAATCCCACTaGCTTCCAGATGACAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: RLQFSGMHPGVRLHRNYSVVKSH*LPDDKW Trigger: CCACTTGTCATCTGGAAGCCAGTGGGATTTTACCAC...GCTATAGTTCCTATGCAGTCTCACCCCTGGGTGCATGCCACTAAACTGTAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR CCA 90 bp | AGATTACAGTTTAGTGGCATGCACCCAGGGGTGAGACTGCATAGGAACTATAGCAAATACAATGGGTGGTaGAACTTGGCACTGCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: RLQFSGMHPGVRLHRNYSKYNGW*NLALPW Trigger: CCAAGGCAGTGCCAAGTTCCACCACCCATTGTATTT...GCTATAGTTCCTATGCAGTCTCACCCCTGGGTGCATGCCACTAAACTGTAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGCCAGGGCCAGACTCCCGCTCTGCATCCCTTTGTTCTTTCCAACAAGTGACTGTCATTTTTCAATaGTATAGACACACACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: GEPGPDSRSASLCSFQQVTVIFQ*YRHTLR Trigger: TCTGAGTGTGTGTCTATACCATTGAAAAATGACAGT...CACTTGTTGGAAAGAACAAAGGGATGCAGAGCGGGAGTCTGGCCCTGGCTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CAA 90 bp | GGAAGGCCTGTAAGTGCGCTCTGTATCTTGGGGCCCATACTACTATaGAGCTTGCTAAGGCCAAGAATACATAGCCTCTTCCTTTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: GRPVSALCILGPILL*SLLRPRIHSLFLFQ Trigger: TTGAAAAAGGAAGAGGCTATGTATTCTTGGCCTTAGCAAGCTCAATAGTAGTATGGGCCCCAAGATACAGAGCGCACTTACAGGCCTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR TCA 90 bp | AGATTACAGTTTAGTGGCATGCACCCAGGGGTGAGACTGCATAGGAACTATAGCCAAGGGTGTGAATTCTaGGAGACAAAGCCATCTGTA | + |
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Preference number: 2 (lower is better) Translates to: RLQFSGMHPGVRLHRNYSQGCEF*ETKPSV Trigger: TACAGATGGCTTTGTCTCTCAGAATTCACACCCTTG...GCTATAGTTCCTATGCAGTCTCACCCCTGGGTGCATGCCACTAAACTGTAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCACTGCCTTGGCAGGTAGCAGGAGTTGTGTGTGTGTGTATGTATGTAGGGGAAGCAGTAGCATTTaGTTTAAATGCTGCCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LGTALAGSRSCVCVYVCRGSSSI*FKCCQE Trigger: TTCTTGGCAGCATTTAAACCAAATGCTACTGCTTCC...CCTACATACATACACACACACACAACTCCTGCTACCTGCCAAGGCAGTGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR-3UTR CCA 90 bp | GTAACTCACTTCAGCCTCAGAGTGCACCATGAGGTAAATGAAATAGGCCATTTTAACTTGGCACTGCCTTaGCAGGTAGCAGGAGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VTHFSLRVHHEVNEIGHFNLALP*QVAGVV Trigger: CACAACTCCTGCTACCTGCCAAGGCAGTGCCAAGTT...AAAATGGCCTATTTCATTTACCTCATGGTGCACTCTGAGGCTGAAGTGAGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR CAA 90 bp | CCTGTAAGTGCGCTCTGTATCTTGGGGCCCATACTACTATTGAGCTaGCTAAGGCCAAGAATACATAGCCTCTTCCTTTTTCAACTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PVSALCILGPILLLS*LRPRIHSLFLFQLS Trigger: AGAGAGTTGAAAAAGGAAGAGGCTATGTATTCTTGGCCTTAGCAAGCTCAATAGTAGTATGGGCCCCAAGATACAGAGCGCACTTACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAACTCACTTCAGCCTCAGAGTGCACCATGAGGTAAATGAAATAGGCCATTTTCAGGTTCCTGGAGTCTaGATAACAGGAGCATGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VTHFSLRVHHEVNEIGHFQVPGV*ITGACP Trigger: TGGACATGCTCCTGTTATCCAGACTCCAGGAACCTG...AAAATGGCCTATTTCATTTACCTCATGGTGCACTCTGAGGCTGAAGTGAGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAACTCACTTCAGCCTCAGAGTGCACCATGAGGTAAATGAAATAGGCCATTTTTATCAGAAAGGATGCTaGGTGCCTGGATGGGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: VTHFSLRVHHEVNEIGHFYQKGC*VPGWGF Trigger: AAAACCCCATCCAGGCACTCAGCATCCTTTCTGATA...AAAATGGCCTATTTCATTTACCTCATGGTGCACTCTGAGGCTGAAGTGAGTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR CAA 90 bp | AGAATCATGTATATTCTGAGTGACTCAGCTATTGACATTCAAGTTTaGACCAGTTTCAAGATGTTGCTACAAGACAGTGGAAAGACCACA | + |
|
Preference number: 2 (lower is better) Translates to: RIMYILSDSAIDIQV*TSFKMLLQDSGKTT Trigger: TGTGGTCTTTCCACTGTCTTGTAGCAACATCTTGAAACTGGTCAAAACTTGAATGTCAATAGCTGAGTCACTCAGAATATACATGATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR CCA 72 bp | GCCAGCTGGGAAATGGGCCTCTTTGGCAAAGGAATCTaGAAACACTCCGAGCCGCTCTGCTCAGGTAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ASWEMGLFGKGI*KHSEPLCSGRA Trigger: GGCCCTACCTGAGCAGAGCGGCTCGGAGTGTTTCCAGATTCCTTTGCCAAAGAGGCCCATTTCCCAGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR CCA 72 bp | GGCAGACATCTCTGCCAGCTGGGAAATGGGCCTCTTTaGCAAAGGAATCTGGAAACACTCCGAGCCGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GRHLCQLGNGPL*QRNLETLRAAL Trigger: CAGAGCGGCTCGGAGTGTTTCCAGATTCCTTTGCCAAAGAGGCCCATTTCCCAGCTGGCAGAGATGTCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR CCA 72 bp | GAGAGTCAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTaGGCAATAACACCGTTGGCAGACATCTCTGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ESQLSLPLGRQF*AITPLADISAS Trigger: GCTGGCAGAGATGTCTGCCAACGGTGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTGACTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGATGGAGACACAGAGCTCAGGTGCCCAGCTGTGTTGGGAGAGCCAGGGCCACGATCATTCGGGAAGTaGTTCTCCATGAGTGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: EDGDTELRCPAVLGEPGPRSFGK*FSMSAF Trigger: AAAAGCACTCATGGAGAACAACTTCCCGAATGATCG...TGGCCCTGGCTCTCCCAACACAGCTGGGCACCTGAGCTCTGTGTCTCCATCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR CCA 72 bp | CATCCCTTTGTTCTTTCCAACAAGTGTAGGCAGCTGTaGCAAGTATGGCGGGGCCACAGAGCTGAGACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: HPFVLSNKCRQL*QVWRGHRAETQ Trigger: TTGAGTCTCAGCTCTGTGGCCCCGCCATACTTGCCACAGCTGCCTACACTTGTTGGAAAGAACAAAGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR GCA 72 bp | GGAGGTGTCTGTTACCTCTTCCCAGACAGACAGCTGTaGTTTGTAACTCACTTCAGCCTCAGAGTGCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: GGVCYLFPDRQL*FVTHFSLRVHH Trigger: ATGGTGCACTCTGAGGCTGAAGTGAGTTACAAAGCACAGCTGTCTGTCTGGGAAGAGGTAACAGACACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR TCA 72 bp | CACTCAGATTACAGTTTAGTGGCATGCACCCAGGGGTaGGACTGCATAGGAACTATAGCAGTGAGGTATGAC | + |
|
Preference number: 3 (lower is better) Translates to: HSDYSLVACTQG*DCIGTIAVRYD Trigger: GTCATACCTCACTGCTATAGTTCCTATGCAGTCTCACCCCTGGGTGCATGCCACTAAACTGTAATCTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR GCA 72 bp | TGTGAAGTACCTGTGTCTAGAAGGAAGGCCTGTAAGTaGGCTCTGTATCTTGGGGCCCATACTACTATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CEVPVSRRKACK*ALYLGAHTTIE Trigger: CTCAATAGTAGTATGGGCCCCAAGATACAGAGCGCACTTACAGGCCTTCCTTCTAGACACAGGTACTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR CCA 72 bp | CTCTCCGATTTGGAAAAATGGGTAAGACCAGGTTCCTaGAGTCTGGATAACAGGAGCATGTCCAGAAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSDLEKWVRPGS*SLDNRSMSRRS Trigger: GCTTCTTCTGGACATGCTCCTGTTATCCAGACTCCAGGAACCTGGTCTTACCCATTTTTCCAAATCGGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR CCA 72 bp | GGTAAATACAATGGGTGGTGGAACTTGGCACTGCCTTaGCAGGTAGCAGGAGTTGTGTGTGTGTGTATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: GKYNGWWNLALP*QVAGVVCVCMY Trigger: ATACATACACACACACACAACTCCTGCTACCTGCCAAGGCAGTGCCAAGTTCCACCACCCATTGTATTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR CCA 72 bp | TCAACTCTCTCAGGAGCAATGAAAAACACACTACACTaGGAGGTGTCTGTTACCTCTTCCCAGACAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: STLSGAMKNTLH*EVSVTSSQTDS Trigger: GCTGTCTGTCTGGGAAGAGGTAACAGACACCTCCCAGTGTAGTGTGTTTTTCATTGCTCCTGAGAGAGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR-3UTR CAA 90 bp | AGATTACAGTTTAGTGGCATGCACCCAGGGGTGAGACTGCATAGGAACTATAGCAGTGGGCAGAGTCCATaGAGAAGGAAAGTCTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: RLQFSGMHPGVRLHRNYSSGQSP*RRKVYG Trigger: ACCATAGACTTTCCTTCTCAATGGACTCTGCCCACT...GCTATAGTTCCTATGCAGTCTCACCCCTGGGTGCATGCCACTAAACTGTAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACACCGTTGGCAGACATCAATAGCCAAAGAGCATaGTGTCTGGTAAATACAATG | + |
|
Preference number: 3 (lower is better) Translates to: LSLPLGRQFWAITPLADINSQRA*CLVNTM Trigger: CATTGTATTTACCAGACACAATGCTCTTTGGCTATT...GATGTCTGCCAACGGTGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR TCA 72 bp | TTGCTACAAGACAGTGGAAAGACCACACACACCCCCTaGATCTATATTACAGAGGAAGACTTGGTGTTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: LLQDSGKTTHTP*IYITEEDLVLA Trigger: CGCCAACACCAAGTCTTCCTCTGTAATATAGATTCAGGGGGTGTGTGTGGTCTTTCCACTGTCTTGTAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR CCA 72 bp | CTCCACAAATACCCAAGTCTCTCCGATTTGGAAAAATaGGTAAGACCAGGTTCCTGGAGTCTGGATAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LHKYPSLSDLEK*VRPGSWSLDNR Trigger: CCTGTTATCCAGACTCCAGGAACCTGGTCTTACCCATTTTTCCAAATCGGAGAGACTTGGGTATTTGTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR TCA 72 bp | AAGCTGCTAGAGCTGACAATAGGTAAAGCAAGGGTGTaGATTCTGAGAGACAAAGCCATCTGTAGAAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: KLLELTIGKARV*ILRDKAICRNP Trigger: GGGATTTCTACAGATGGCTTTGTCTCTCAGAATTCACACCCTTGCTTTACCTATTGTCAGCTCTAGCAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR TCA 72 bp | CATAGCCTCTTCCTTTTTCAACTCTCTCAGGAGCAATaGAAAACACACTACACTGGGAGGTGTCTGTTACCT | + |
|
Preference number: 3 (lower is better) Translates to: HSLFLFQLSQEQ*KTHYTGRCLLP Trigger: AGGTAACAGACACCTCCCAGTGTAGTGTGTTTTTCATTGCTCCTGAGAGAGTTGAAAAAGGAAGAGGCTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAACTCACTTCAGCCTCAGAGTGCACCATGAGGTAAATGAAATAGGCCATTTTTCTTGCCTCTCGGAATaGATGGCTATTGAAGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: VTHFSLRVHHEVNEIGHFSCLSE*MAIEVI Trigger: GATTACTTCAATAGCCATCAATTCCGAGAGGCAAGA...AAAATGGCCTATTTCATTTACCTCATGGTGCACTCTGAGGCTGAAGTGAGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAACTCACTTCAGCCTCAGAGTGCACCATGAGGTAAATGAAATAGGCCATTTTAGGATGGGCAAATCTTaGTCCTTTATGACAGGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VTHFSLRVHHEVNEIGHFRMGKS*SFMTGL Trigger: TAGACCTGTCATAAAGGACAAAGATTTGCCCATCCT...AAAATGGCCTATTTCATTTACCTCATGGTGCACTCTGAGGCTGAAGTGAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGCCAGGGCCAGACTCCCGCTCTGCATCCCTTTGTTCTTTCCAACAAGTGCGGAAACCCACGTCCTaGTCCGAGCAGCGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GEPGPDSRSASLCSFQQVRKPTS*SEQRWR Trigger: CCGCCAGCGCTGCTCGGAGCAGGACGTGGGTTTCCG...CACTTGTTGGAAAGAACAAAGGGATGCAGAGCGGGAGTCTGGCCCTGGCTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR TCA 90 bp | GGCCACAGAGCTGAGACTCAAGGATGTGACCATGGCCAGCTGTGGTATGGAAATGGCCGCCGACGACGGTaGCGGCGATCTGGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHRAETQGCDHGQLWYGNGRRRR*RRSGPG Trigger: TCCTGGACCAGATCGCCGTCACCGTCGTCGGCGGCC...ATTTCCATACCACAGCTGGCCATGGTCACATCCTTGAGTCTCAGCTCTGTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR GCA 90 bp | GAAGATGGAGACACAGAGCTCAGGTGCCCAGCTGTGTTGGGAGAGCCAGGGCCAGCCAGCTGCTTGCCTTaGTCGGTCAGTGGGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: EDGDTELRCPAVLGEPGPASCLP*SVSGHL Trigger: CAAGTGCCCACTGACCGAGCAAGGCAAGCAGCTGGC...TGGCCCTGGCTCTCCCAACACAGCTGGGCACCTGAGCTCTGTGTCTCCATCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR TCA 90 bp | GGCCACAGAGCTGAGACTCAAGGATGTGACCATGGCCAGCTGTGGTATGGAAATGGTAGTCCTCGCGGATaGGCCGGTCGGTCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GHRAETQGCDHGQLWYGNGSPRG*AGRSAA Trigger: GGCTGCTGACCGACCGGCTCATCCGCGAGGACTACC...ATTTCCATACCACAGCTGGCCATGGTCACATCCTTGAGTCTCAGCTCTGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR GCA 90 bp | GAAGATGGAGACACAGAGCTCAGGTGCCCAGCTGTGTTGGGAGAGCCAGGGCCACCCCCACATCTAAGTTaGATGCCTGGTCGAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EDGDTELRCPAVLGEPGPPPHLS*MPGRRP Trigger: TGGCCTTCGACCAGGCATGCAACTTAGATGTGGGGG...TGGCCCTGGCTCTCCCAACACAGCTGGGCACCTGAGCTCTGTGTCTCCATCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGGTAAATACAATGGGTGGTGGAACTTGGCACTGCCTTGGCAGGTAGCAAGCTGCAGGCCTAGGTaGCCGCCGACGACGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: VSGKYNGWWNLALPWQVASCRPR*PPTTVT Trigger: CGTCACCGTCGTCGGCGGCCACCTAGGCCTGCAGCT...TGCTACCTGCCAAGGCAGTGCCAAGTTCCACCACCCATTGTATTTACCAGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR CCA 90 bp | GAAGATGGAGACACAGAGCTCAGGTGCCCAGCTGTGTTGGGAGAGCCAGGGCCAATAGGAGAAGGTGTCTaGCATGGGGACCCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EDGDTELRCPAVLGEPGPIGEGV*HGDPMS Trigger: GGACATGGGGTCCCCATGCCAGACACCTTCTCCTAT...TGGCCCTGGCTCTCCCAACACAGCTGGGCACCTGAGCTCTGTGTCTCCATCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACACCGTTGGCAGACATCGCATGCGGCCGTCTGTaGAGCAGCGCAGCATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLPLGRQFWAITPLADIACGRL*SSAAWS Trigger: GCTCCATGCTGCGCTGCTCCACAGACGGCCGCATGC...GATGTCTGCCAACGGTGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR CCA 90 bp | GGCCACAGAGCTGAGACTCAAGGATGTGACCATGGCCAGCTGTGGTATGGAAATATGGAGCCAATCACCTaGCCACCCACCACCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: GHRAETQGCDHGQLWYGNMEPIT*PPTTTT Trigger: GGTGGTGGTGGTGGGTGGCCAGGTGATTGGCTCCAT...ATTTCCATACCACAGCTGGCCATGGTCACATCCTTGAGTCTCAGCTCTGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACACCGTTGGCAGACATCGCCTTGCTCGGTCAGTaGGCACTTGACACCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: LSLPLGRQFWAITPLADIALLGQ*ALDTHT Trigger: GGTGTGGGTGTCAAGTGCCCACTGACCGAGCAAGGC...GATGTCTGCCAACGGTGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR CCA 90 bp | TCTACAATAGCCCACTCACCCCTCCACAAATACCCAAGTCTCTCCGATTTGGAAACGGTGACGGCGATCTaGTCCAGGAACACCGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: STIAHSPLHKYPSLSDLETVTAI*SRNTAR Trigger: CCGGGCGGTGTTCCTGGACCAGATCGCCGTCACCGT...TTCCAAATCGGAGAGACTTGGGTATTTGTGGAGGGGTGAGTGGGCTATTGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| 3UTR CAA 72 bp | TGGCAGACATCTCTGCCAGCTGGGAAATGGGCCTCTTaGGCAAAGGAATCTGGAAACACTCCGAGCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WQTSLPAGKWAS*AKESGNTPSRS Trigger: AGAGCGGCTCGGAGTGTTTCCAGATTCCTTTGCCAAAGAGGCCCATTTCCCAGCTGGCAGAGATGTCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTCCACAAATACCCAAGTCTCTCCGATTTGGAAAAATGGGTAAGACCAGGTACAGCTTTCCCCCGGTaGCCCCGTGTGCTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: PLHKYPSLSDLEKWVRPGTAFPR*PRVLFT Trigger: GGTGAAGAGCACACGGGGGCACCGGGGGAAAGCTGT...ACCTGGTCTTACCCATTTTTCCAAATCGGAGAGACTTGGGTATTTGTGGAGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR GCA 90 bp | CCAGATGAGAGTCAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACAAGCAGTTGCTTTGCATaGGGCCGTCTGTGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PDESQLSLPLGRQFWAITSSCFA*GRLWSS Trigger: GCTGCTCCACAGACGGCCGCATGCAAAGCAACTGCT...TGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTGACTCTCATCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR GCA 90 bp | AGATTACAGTTTAGTGGCATGCACCCAGGGGTGAGACTGCATAGGAACTATAGCCTTCTCCCTGGGACTTaGCAGTCCCGGGAGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLQFSGMHPGVRLHRNYSLLPGT*QSREDG Trigger: GCCATCCTCCCGGGACTGGCAAGTCCCAGGGAGAAG...GCTATAGTTCCTATGCAGTCTCACCCCTGGGTGCATGCCACTAAACTGTAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR CCA 90 bp | AGATTACAGTTTAGTGGCATGCACCCAGGGGTGAGACTGCATAGGAACTATAGCGCTCTTCACCACCACTaGGTAGCCCAGGGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLQFSGMHPGVRLHRNYSALHHH*VAQGLS Trigger: GCTGAGCCCCTGGGCTACCCAGTGGTGGTGAAGAGC...GCTATAGTTCCTATGCAGTCTCACCCCTGGGTGCATGCCACTAAACTGTAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR CCA 90 bp | GGCCACAGAGCTGAGACTCAAGGATGTGACCATGGCCAGCTGTGGTATGGAAATTCTAAGTTGCATGCCTaGTCGAAGGCCAGGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GHRAETQGCDHGQLWYGNSKLHA*SKARKP Trigger: CGGCTTCCTGGCCTTCGACCAGGCATGCAACTTAGA...ATTTCCATACCACAGCTGGCCATGGTCACATCCTTGAGTCTCAGCTCTGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR TCA 90 bp | AGATTACAGTTTAGTGGCATGCACCCAGGGGTGAGACTGCATAGGAACTATAGCTGCTTTGAGGACGGTTaGCCAAGCGGCAGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLQFSGMHPGVRLHRNYSCFEDG*PSGSPA Trigger: AGCTGGGCTGCCGCTTGGTCAACCGTCCTCAAAGCA...GCTATAGTTCCTATGCAGTCTCACCCCTGGGTGCATGCCACTAAACTGTAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCTGGTAAATACAATGGGTGGTGGAACTTGGCACTGCCTTGGCAGGTAGCACCCCATTGTTTTTACTaGGGAATCCCGGGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSGKYNGWWNLALPWQVAPHCFY*GIPGLS Trigger: GGAGAGGCCCGGGATTCCTCAGTAAAAACAATGGGG...TGCTACCTGCCAAGGCAGTGCCAAGTTCCACCACCCATTGTATTTACCAGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR CCA 90 bp | TCCACCTCACCTTCTACAGAGCGCTTCAGTGAGAAGCTGAATGTCGGAGAAATGAGAAGGTGTCTGGCATaGGGACCCCATGTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STSPSTERFSEKLNVGEMRRCLA*GPHVQP Trigger: TGGCTGGACATGGGGTCCCCATGCCAGACACCTTCT...CATTTCTCCGACATTCAGCTTCTCACTGAAGCGCTCTGTAGAAGGTGAGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTCCACAAATACCCAAGTCTCTCCGATTTGGAAAAATGGGTAAGACCAGGTCCAGGAAGCCGACATTaGCGTTGGCCTCACACACCG | + |
|
Preference number: 4 (lower is better) Translates to: PLHKYPSLSDLEKWVRPGPGSRH*RWPHTP Trigger: CGGTGTGTGAGGCCAACGCCAATGTCGGCTTCCTGG...ACCTGGTCTTACCCATTTTTCCAAATCGGAGAGACTTGGGTATTTGTGGAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATGAGAGTCAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACAAGGATGTTGGACACCTaGATAGCCAGCTGCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PDESQLSLPLGRQFWAITRMLDT*IASCLP Trigger: AGGCAAGCAGCTGGCTATCCAGGTGTCCAACATCCT...TGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTGACTCTCATCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
||
| CDS-3UTR TCA 90 bp | CCAGATGAGAGTCAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACACTCTCTGCAACTCCCTaGGCTGAAACGCAACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PDESQLSLPLGRQFWAITLSATP*AETQPF Trigger: AAATGGTTGCGTTTCAGCTCAGGGAGTTGCAGAGAG...TGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTGACTCTCATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR GCA 90 bp | GTGTCTGGTAAATACAATGGGTGGTGGAACTTGGCACTGCCTTGGCAGGTAGCACGGATGTCCTTCCCGTaGGACTCTTTCACATACTTC | + |
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Preference number: 4 (lower is better) Translates to: VSGKYNGWWNLALPWQVARMSFP*DSFTYF Trigger: GAAGTATGTGAAAGAGTCGCACGGGAAGGACATCCG...TGCTACCTGCCAAGGCAGTGCCAAGTTCCACCACCCATTGTATTTACCAGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR CCA 90 bp | CCAGATGAGAGTCAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACAACTGGACAGAGGGTGTaGATACTCGAACAACCACCA | + |
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Preference number: 4 (lower is better) Translates to: PDESQLSLPLGRQFWAITTGQRV*ILEQPP Trigger: TGGTGGTTGTTCGAGTATCCACACCCTCTGTCCAGT...TGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTGACTCTCATCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR CCA 90 bp | CCCCTCCACAAATACCCAAGTCTCTCCGATTTGGAAAAATGGGTAAGACCAGGTCCCAGTCTGCCTGTTTaGCAGCAGGGACATAGCATA | + |
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Preference number: 4 (lower is better) Translates to: PLHKYPSLSDLEKWVRPGPSLPV*QQGHSI Trigger: TATGCTATGTCCCTGCTGCCAAACAGGCAGACTGGG...ACCTGGTCTTACCCATTTTTCCAAATCGGAGAGACTTGGGTATTTGTGGAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR CCA 90 bp | GTAACTCACTTCAGCCTCAGAGTGCACCATGAGGTAAATGAAATAGGCCATTTTGCTCGTTCTTCTCCCTaGGACTTGCCAGTCCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: VTHFSLRVHHEVNEIGHFARSSP*DLPVPG Trigger: TCCCGGGACTGGCAAGTCCCAGGGAGAAGAACGAGC...AAAATGGCCTATTTCATTTACCTCATGGTGCACTCTGAGGCTGAAGTGAGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CAA 72 bp | CACTCACCCCTCCACAAATACCCAAGTCTCTCCGATTaGGAAAAATGGGTAAGACCAGGTTCCTGGAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: HSPLHKYPSLSD*EKWVRPGSWSL Trigger: CAGACTCCAGGAACCTGGTCTTACCCATTTTTCCAAATCGGAGAGACTTGGGTATTTGTGGAGGGGTGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CAA 72 bp | AGGGTTTCAGGTTATGCAGGGCCTCTAGAAGGTTCCTaGGATGCCTTACTCGCTTCATGTTGTGAAGTACCT | + |
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Preference number: 4 (lower is better) Translates to: RVSGYAGPLEGS*DALLASCCEVP Trigger: AGGTACTTCACAACATGAAGCGAGTAAGGCATCCAAGGAACCTTCTAGAGGCCCTGCATAACCTGAAACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR CCA 90 bp | AGATTACAGTTTAGTGGCATGCACCCAGGGGTGAGACTGCATAGGAACTATAGCTGTCCAGCCAGCTCTTaGAATGTCCAAAACTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: RLQFSGMHPGVRLHRNYSCPASS*NVQNLL Trigger: CAACAAGTTTTGGACATTCCAAGAGCTGGCTGGACA...GCTATAGTTCCTATGCAGTCTCACCCCTGGGTGCATGCCACTAAACTGTAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR GCA 90 bp | GTAACTCACTTCAGCCTCAGAGTGCACCATGAGGTAAATGAAATAGGCCATTTTTGCCACAGAAATCCATaGCCAGGATGTTGGACACCT | + |
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Preference number: 4 (lower is better) Translates to: VTHFSLRVHHEVNEIGHFCHRNP*PGCWTP Trigger: AGGTGTCCAACATCCTGGGCATGGATTTCTGTGGCA...AAAATGGCCTATTTCATTTACCTCATGGTGCACTCTGAGGCTGAAGTGAGTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CAA 72 bp | GCGCTCTGTATCTTGGGGCCCATACTACTATTGAGCTaGCTAAGGCCAAGAATACATAGCCTCTTCCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: ALCILGPILLLS*LRPRIHSLFLF Trigger: AAAAAGGAAGAGGCTATGTATTCTTGGCCTTAGCAAGCTCAATAGTAGTATGGGCCCCAAGATACAGAGCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CAA 72 bp | GCTATTGACATTCAAGTTTTGACCAGTTTCAAGATGTaGCTACAAGACAGTGGAAAGACCACACACACCCCC | + |
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Preference number: 4 (lower is better) Translates to: AIDIQVLTSFKM*LQDSGKTTHTP Trigger: GGGGGTGTGTGTGGTCTTTCCACTGTCTTGTAGCAACATCTTGAAACTGGTCAAAACTTGAATGTCAATAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CAA 72 bp | TATGACAGGTCTATAATTATTAATAGCCAAAGAGCATaGTGTCTGGTAAATACAATGGGTGGTGGAACTTGG | + |
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Preference number: 4 (lower is better) Translates to: YDRSIIINSQRA*CLVNTMGGGTW Trigger: CCAAGTTCCACCACCCATTGTATTTACCAGACACAATGCTCTTTGGCTATTAATAATTATAGACCTGTCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| 3UTR CAA 72 bp | TATATTCTGAGTGACTCAGCTATTGACATTCAAGTTTaGACCAGTTTCAAGATGTTGCTACAAGACAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: YILSDSAIDIQV*TSFKMLLQDSG Trigger: TCCACTGTCTTGTAGCAACATCTTGAAACTGGTCAAAACTTGAATGTCAATAGCTGAGTCACTCAGAATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS CCA 90 bp | CTCAGCTGCAGGCCTAGGTGGCCGCCGACGACGGTGACGGCGATCTaGTCCAGGAACACCGCCCGGAAACCCACGTCCTGCTCCGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSCRPRWPPTTVTAI*SRNTARKPTSCSEQ Trigger: CTGCTCGGAGCAGGACGTGGGTTTCCGGGCGGTGTTCCTGGACCAGATCGCCGTCACCGTCGTCGGCGGCCACCTAGGCCTGCAGCTGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS GCA 90 bp | ACAACCACCACGTCGGGGAAGGTGGTCAGGGGTTTCTGGCTCAGCTaGAGGCCTAGGTGGCCGCCGACGACGGTGACGGCGATCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: TTTTSGKVVRGFWLS*RPRWPPTTVTAIWS Trigger: GGACCAGATCGCCGTCACCGTCGTCGGCGGCCACCTAGGCCTGCAGCTGAGCCAGAAACCCCTGACCACCTTCCCCGACGTGGTGGTTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS CCA 90 bp | GATACTCGAACAACCACCACGTCGGGGAAGGTGGTCAGGGGTTTCTaGCTCAGCTGCAGGCCTAGGTGGCCGCCGACGACGGTGACGGCG | + |
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Preference number: 5 (lower is better) Translates to: DTRTTTTSGKVVRGF*LSCRPRWPPTTVTA Trigger: CGCCGTCACCGTCGTCGGCGGCCACCTAGGCCTGCAGCTGAGCCAGAAACCCCTGACCACCTTCCCCGACGTGGTGGTTGTTCGAGTATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS CCA 90 bp | CAACTCCCTGAGCTGAAACGCAACCATTTGGCTCGTTCTTCTCCCTaGGACTTGCCAGTCCCGGGAGGATGGCCATCTTCCCAGTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: QLPELKRNHLARSSP*DLPVPGGWPSSQSA Trigger: GGCAGACTGGGAAGATGGCCATCCTCCCGGGACTGGCAAGTCCCAGGGAGAAGAACGAGCCAAATGGTTGCGTTTCAGCTCAGGGAGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR CAA 90 bp | GGAGAGCCAGGGCCAGACTCCCGCTCTGCATCCCTTTGTTCTTTCCAACAAGTGCCACCTAGAAAGCAGTaGCTTTGCATGCGGCCGTCT | + |
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Preference number: 5 (lower is better) Translates to: GEPGPDSRSASLCSFQQVPPRKQ*LCMRPS Trigger: AGACGGCCGCATGCAAAGCAACTGCTTTCTAGGTGG...CACTTGTTGGAAAGAACAAAGGGATGCAGAGCGGGAGTCTGGCCCTGGCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR CAA 90 bp | CCAGATGAGAGTCAGCTTTCTCTGCCTCTAGGCAGGCAGTTCTGGGCAATAACAGCCAGGAAGCCGACATaGGCGTTGGCCTCACACACC | + |
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Preference number: 5 (lower is better) Translates to: PDESQLSLPLGRQFWAITARKPT*ALASHT Trigger: GGTGTGTGAGGCCAACGCCAATGTCGGCTTCCTGGC...TGTTATTGCCCAGAACTGCCTGCCTAGAGGCAGAGAAAGCTGACTCTCATCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR CAA 90 bp | GGCCACAGAGCTGAGACTCAAGGATGTGACCATGGCCAGCTGTGGTATGGAAATGCCCCCACATCTAAGTaGCATGCCTGGTCGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GHRAETQGCDHGQLWYGNAPTSK*HAWSKA Trigger: GGCCTTCGACCAGGCATGCAACTTAGATGTGGGGGC...ATTTCCATACCACAGCTGGCCATGGTCACATCCTTGAGTCTCAGCTCTGTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS TCA 90 bp | AGACCCATTGGTGATGGCATAGACACTCTCTGCAACTCCCTGAGCTaGAACGCAACCATTTGGCTCGTTCTTCTCCCTGGGACTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RPIGDGIDTLCNSLS*NATIWLVLLPGTCQ Trigger: CTGGCAAGTCCCAGGGAGAAGAACGAGCCAAATGGTTGCGTTTCAGCTCAGGGAGTTGCAGAGAGTGTCTATGCCATCACCAATGGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR CAA 90 bp | AGATTACAGTTTAGTGGCATGCACCCAGGGGTGAGACTGCATAGGAACTATAGCAGCCAGCTGCTTGCCTaGCTCGGTCAGTGGGCACTT | + |
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Preference number: 5 (lower is better) Translates to: RLQFSGMHPGVRLHRNYSSQLLA*LGQWAL Trigger: AAGTGCCCACTGACCGAGCAAGGCAAGCAGCTGGCT...GCTATAGTTCCTATGCAGTCTCACCCCTGGGTGCATGCCACTAAACTGTAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR CAA 90 bp | GTAACTCACTTCAGCCTCAGAGTGCACCATGAGGTAAATGAAATAGGCCATTTTTCTTCTCCCTGGGACTaGCCAGTCCCGGGAGGATGG | + |
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Preference number: 5 (lower is better) Translates to: VTHFSLRVHHEVNEIGHFSSPWD*PVPGGW Trigger: CCATCCTCCCGGGACTGGCAAGTCCCAGGGAGAAGA...AAAATGGCCTATTTCATTTACCTCATGGTGCACTCTGAGGCTGAAGTGAGTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR CAA 90 bp | GGCCACAGAGCTGAGACTCAAGGATGTGACCATGGCCAGCTGTGGTATGGAAATATGTCCAGCCAGCTCTaGGAATGTCCAAAACTTGTT | + |
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Preference number: 5 (lower is better) Translates to: GHRAETQGCDHGQLWYGNMSSQL*ECPKLV Trigger: AACAAGTTTTGGACATTCCAAGAGCTGGCTGGACAT...ATTTCCATACCACAGCTGGCCATGGTCACATCCTTGAGTCTCAGCTCTGTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR CAA 90 bp | CCCCTCCACAAATACCCAAGTCTCTCCGATTTGGAAAAATGGGTAAGACCAGGTCTGAAACGCAACCATTaGGCTCGTTCTTCTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: PLHKYPSLSDLEKWVRPGLKRNH*ARSSPW Trigger: CCAGGGAGAAGAACGAGCCAAATGGTTGCGTTTCAG...ACCTGGTCTTACCCATTTTTCCAAATCGGAGAGACTTGGGTATTTGTGGAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS-3UTR CAA 90 bp | TCCACCTCACCTTCTACAGAGCGCTTCAGTGAGAAGCTGAATGTCGGAGAAATGTGGAATGTCCAAAACTaGTTGATGCAGTTTAAGATG | + |
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Preference number: 5 (lower is better) Translates to: STSPSTERFSEKLNVGEMWNVQN*LMQFKM Trigger: CATCTTAAACTGCATCAACAAGTTTTGGACATTCCA...CATTTCTCCGACATTCAGCTTCTCACTGAAGCGCTCTGTAGAAGGTGAGGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS TCA 72 bp | CGCGCAGGATCTGCACCTGCGGGTAGTCCTCGCGGATaGGCCGGTCGGTCAGCAGCCAGACCTGCGCGCACA | + |
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Preference number: 6 (lower is better) Translates to: RAGSAPAGSPRG*AGRSAARPART Trigger: TGTGCGCGCAGGTCTGGCTGCTGACCGACCGGCTCATCCGCGAGGACTACCCGCAGGTGCAGATCCTGCGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS GCA 72 bp | ATCTGGTCCAGGAACACCGCCCGGAAACCCACGTCCTaGTCCGAGCAGCGCTGGCGGAGCGCGCGCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: IWSRNTARKPTS*SEQRWRSARRI Trigger: GATCCTGCGCGCGCTCCGCCAGCGCTGCTCGGAGCAGGACGTGGGTTTCCGGGCGGTGTTCCTGGACCAGAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS CCA 72 bp | AGGCCTAGGTGGCCGCCGACGACGGTGACGGCGATCTaGTCCAGGAACACCGCCCGGAAACCCACGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RPRWPPTTVTAI*SRNTARKPTSC Trigger: GCAGGACGTGGGTTTCCGGGCGGTGTTCCTGGACCAGATCGCCGTCACCGTCGTCGGCGGCCACCTAGGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS CAA 90 bp | CCTGAGCTGAAACGCAACCATTTGGCTCGTTCTTCTCCCTGGGACTaGCCAGTCCCGGGAGGATGGCCATCTTCCCAGTCTGCCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: PELKRNHLARSSPWD*PVPGGWPSSQSACL Trigger: CAAACAGGCAGACTGGGAAGATGGCCATCCTCCCGGGACTGGCAAGTCCCAGGGAGAAGAACGAGCCAAATGGTTGCGTTTCAGCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS GCA 72 bp | AACGCAACCATTTGGCTCGTTCTTCTCCCTGGGACTTaGCAGTCCCGGGAGGATGGCCATCTTCCCAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: NATIWLVLLPGT*QSREDGHLPSL Trigger: CAGACTGGGAAGATGGCCATCCTCCCGGGACTGGCAAGTCCCAGGGAGAAGAACGAGCCAAATGGTTGCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS CCA 72 bp | GAGCTGAAACGCAACCATTTGGCTCGTTCTTCTCCCTaGGACTTGCCAGTCCCGGGAGGATGGCCATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ELKRNHLARSSP*DLPVPGGWPSS Trigger: GGAAGATGGCCATCCTCCCGGGACTGGCAAGTCCCAGGGAGAAGAACGAGCCAAATGGTTGCGTTTCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS CAA 90 bp | TGGCATAGACACTCTCTGCAACTCCCTGAGCTGAAACGCAACCATTaGGCTCGTTCTTCTCCCTGGGACTTGCCAGTCCCGGGAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: WHRHSLQLPELKRNH*ARSSPWDLPVPGGW Trigger: CCATCCTCCCGGGACTGGCAAGTCCCAGGGAGAAGAACGAGCCAAATGGTTGCGTTTCAGCTCAGGGAGTTGCAGAGAGTGTCTATGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS CCA 72 bp | ATGCCACAGAAATCCATGCCCAGGATGTTGGACACCTaGATAGCCAGCTGCTTGCCTTGCTCGGTCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: MPQKSMPRMLDT*IASCLPCSVSG Trigger: CCCACTGACCGAGCAAGGCAAGCAGCTGGCTATCCAGGTGTCCAACATCCTGGGCATGGATTTCTGTGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS CCA 72 bp | TCTGCAATGATTGCCCCCACATCTAAGTTGCATGCCTaGTCGAAGGCCAGGAAGCCGACATTGGCGTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SAMIAPTSKLHA*SKARKPTLALA Trigger: GGCCAACGCCAATGTCGGCTTCCTGGCCTTCGACCAGGCATGCAACTTAGATGTGGGGGCAATCATTGCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS CAA 72 bp | AAACGCAACCATTTGGCTCGTTCTTCTCCCTGGGACTaGCCAGTCCCGGGAGGATGGCCATCTTCCCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: KRNHLARSSPWD*PVPGGWPSSQS Trigger: AGACTGGGAAGATGGCCATCCTCCCGGGACTGGCAAGTCCCAGGGAGAAGAACGAGCCAAATGGTTGCGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS CAA 72 bp | CACTCTCTGCAACTCCCTGAGCTGAAACGCAACCATTaGGCTCGTTCTTCTCCCTGGGACTTGCCAGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: HSLQLPELKRNH*ARSSPWDLPVP Trigger: CGGGACTGGCAAGTCCCAGGGAGAAGAACGAGCCAAATGGTTGCGTTTCAGCTCAGGGAGTTGCAGAGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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| CDS TCA 72 bp | GGTGATGGCATAGACACTCTCTGCAACTCCCTGAGCTaGAACGCAACCATTTGGCTCGTTCTTCTCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GDGIDTLCNSLS*NATIWLVLLPG Trigger: CCCAGGGAGAAGAACGAGCCAAATGGTTGCGTTTCAGCTCAGGGAGTTGCAGAGAGTGTCTATGCCATCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049994.8 |
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