RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RIMBP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029420

Ensembl transcript IDs: ENSMUST00000111346.6, ENSMUST00000196085.5, ENSMUST00000198941.5, ENSMUST00000199537.5, ENSMUST00000199737.5, ENSMUST00000200470.5, ENSMUST00000238334.2, ENSMUST00000239036.2

Found 679 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGAGAGAGGGGCTGGCCCTCCATGGGCTTTCGCCGTCTTTGTCTTaGGAGACGGGGTGGCCATCGCTTTGGCAAAGAAAGCCAGGTCAT +
Preference number: 1 (lower is better)
Translates to: EREGLALHGLSPSLS*ETGWPSLWQRKPGH
Trigger: ATGACCTGGCTTTCTTTGCCAAAGCGATGGCCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCCTCTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 90 bp GGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATaGGCTGTGGGGGATGGAGCTCTCCTTGCTGTCCCTGAACCCTCG +
Preference number: 1 (lower is better)
Translates to: GLPEPIDDVGDPEWR*AVGDGALLAVPEPS
Trigger: CGAGGGTTCAGGGACAGCAAGGAGAGCTCCATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR GCA 90 bp GCACCTCGTAGGTACATGCGTACCTCCATGAGCTCGGGACAATTGTaGTTTGAGGAGAGGGAACACCTGCTCCTAAGGCCAAGGGGCTGC +
Preference number: 1 (lower is better)
Translates to: APRRYMRTSMSSGQL*FEEREHLLLRPRGC
Trigger: GCAGCCCCTTGGCCTTAGGAGCAGGTGTTCCCTCTCCTCAAAGCACAATTGTCCCGAGCTCATGGAGGTACGCATGTACCTACGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 90 bp CTCCCAGGACTACCAGAACCCATAGATGACGTAGGTGACCCCGAATaGAGATGGGCTGTGGGGGATGGAGCTCTCCTTGCTGTCCCTGAA +
Preference number: 1 (lower is better)
Translates to: LPGLPEPIDDVGDPE*RWAVGDGALLAVPE
Trigger: TTCAGGGACAGCAAGGAGAGCTCCATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAGTCCTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR TCA 90 bp CTACTGTGCAGGCCAGGGGAAGACCCTGGGGTCAGGCAGACTGACTaGAACCAAAGGGTCCTTCTGTGGAACACCAACTTGTGTTGGAGC +
Preference number: 1 (lower is better)
Translates to: LLCRPGEDPGVRQTD*NQRVLLWNTNLCWS
Trigger: GCTCCAACACAAGTTGGTGTTCCACAGAAGGACCCTTTGGTTTCAGTCAGTCTGCCTGACCCCAGGGTCTTCCCCTGGCCTGCACAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR CCA 90 bp CTGGCCCTCCATGGGCTTTCGCCGTCTTTGTCTTGGGAGACGGGGTaGCCATCGCTTTGGCAAAGAAAGCCAGGTCATAATTTACTCTGG +
Preference number: 1 (lower is better)
Translates to: LALHGLSPSLSWETG*PSLWQRKPGHNLLW
Trigger: CCAGAGTAAATTATGACCTGGCTTTCTTTGCCAAAGCGATGGCCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR TCA 90 bp CGAATGGAGATGGGCTGTGGGGGATGGAGCTCTCCTTGCTGTCCCTaGACCCTCGGGAGGAACCTAGTAGGTACATTGCGACAGTTTTAT +
Preference number: 1 (lower is better)
Translates to: RMEMGCGGWSSPCCP*TLGRNLVGTLRQFY
Trigger: ATAAAACTGTCGCAATGTACCTACTAGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGAGAGCTCCATCCCCCACAGCCCATCTCCATTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 90 bp GGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTaGAAGTGTCCGGAGGCTCAGGGGTCACTTCACTGCGGCCAGCCT +
Preference number: 1 (lower is better)
Translates to: GFGSPRLELKPVTWI*KCPEAQGSLHCGQP
Trigger: AGGCTGGCCGCAGTGAAGTGACCCCTGAGCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR TCA 90 bp GCGGGCACACAATACAAGGCAAGGGGCCCCCAAGCTTGCTTGGATTaGAAATCAAGGTCTAACTCTAATGGAGAACACCTAGGGCGCACC +
Preference number: 1 (lower is better)
Translates to: AGTQYKARGPQACLD*KSRSNSNGEHLGRT
Trigger: GGTGCGCCCTAGGTGTTCTCCATTAGAGTTAGACCTTGATTTTCAATCCAAGCAAGCTTGGGGGCCCCTTGCCTTGTATTGTGTGCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 90 bp AGGTTGGGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATaGATTTGGAAGTGTCCGGAGGCTCAGGGGTCACTTCACTGCGGC +
Preference number: 1 (lower is better)
Translates to: RLGFGSPRLELKPVT*IWKCPEAQGSLHCG
Trigger: GCCGCAGTGAAGTGACCCCTGAGCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 90 bp GTGGACAGGAATTACAAAGTTGTGGCCATCCCATCAGCCAGCGTCTaGGGAGGTTTGCTGTTCGAGGCTAATGATAAAGATGGGTGTGGG +
Preference number: 1 (lower is better)
Translates to: VDRNYKVVAIPSASV*GGLLFEANDKDGCG
Trigger: CCCACACCCATCTTTATCATTAGCCTCGAACAGCAAACCTCCCCAGACGCTGGCTGATGGGATGGCCACAACTTTGTAATTCCTGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR TCA 90 bp CTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGATTAGGGTGTaGAATGAACACTCTTCTTCTATGTCCAAGCAGATGAGCGAAGAG +
Preference number: 1 (lower is better)
Translates to: LRLLTYVTATCLIRV*NEHSSSMSKQMSEE
Trigger: CTCTTCGCTCATCTGCTTGGACATAGAAGAAGAGTGTTCATTTCACACCCTAATCAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp TGCCCCGGACTCCCGCCAGCCAGGGGAAAGGGTAGGTTGGGTGGTGGTTCGTTTGGGGCTGGCCCTCCATaGGCTTTCGCCGTCTTTGTC +
Preference number: 2 (lower is better)
Translates to: CPGLPPARGKGRLGGGSFGAGPP*AFAVFV
Trigger: GACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCC...AAACGAACCACCACCCAACCTACCCTTTCCCCTGGCTGGCGGGAGTCCGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp ACCCTCTCCCAAGGCCCCTCTGAGAGAGAGGGGCTGGCCCTCCATGGGCTTTCGAAAGATTGCGCCAGATaGCAGAGAGGGGAGGGGGAG +
Preference number: 2 (lower is better)
Translates to: TLSQGPSEREGLALHGLSKDCAR*QRGEGE
Trigger: CTCCCCCTCCCCTCTCTGCCATCTGGCGCAATCTTT...CGAAAGCCCATGGAGGGCCAGCCCCTCTCTCTCAGAGGGGCCTTGGGAGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR CAA 90 bp CCCTCTGAGAGAGAGGGGCTGGCCCTCCATGGGCTTTCGCCGTCTTaGTCTTGGGAGACGGGGTGGCCATCGCTTTGGCAAAGAAAGCCA +
Preference number: 2 (lower is better)
Translates to: PSEREGLALHGLSPS*SWETGWPSLWQRKP
Trigger: TGGCTTTCTTTGCCAAAGCGATGGCCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCCTCTCTCTCAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp CCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGGCTGTGGGGGATCCCCACCCCAGACCTTaGACAGAACCTTGGGAGCGG +
Preference number: 2 (lower is better)
Translates to: PEPIDDVGDPEWRWAVGDPHPRP*TEPWER
Trigger: CCGCTCCCAAGGTTCTGTCCAAGGTCTGGGGTGGGG...ATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR TCA 90 bp ACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGCTGGGGTCAGGCAGACTaGCTGAAACCAAAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: TWRVRPGHSAGTQYKARGWGQAD*LKPKGP
Trigger: AGGACCCTTTGGTTTCAGTCAGTCTGCCTGACCCCA...GCCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR-3UTR GCA 90 bp GAGGGGCTGGCCCTCCATGGGCTTTCGCCGTCTTTGTCTTGGGAGACGGGGTGGACATGGATCCGGTTGTaGTTTTTGACTGAGGGTAGC +
Preference number: 2 (lower is better)
Translates to: EGLALHGLSPSLSWETGWTWIRL*FLTEGS
Trigger: GCTACCCTCAGTCAAAAAGCACAACCGGATCCATGT...CCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp CAGCTGGGTATTCCACCAGCTTTGGCATGCCCAGAGCCAAGGCCACCCCTTGGGGGATCGCCAGGCTTCTaGTTCAGTAATCTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: QLGIPPALACPEPRPPLGGSPGF*FSNLPR
Trigger: TCTGGGGAGATTACTGAACCAGAAGCCTGGCGATCC...CCCAAGGGGTGGCCTTGGCTCTGGGCATGCCAAAGCTGGTGGAATACCCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 90 bp CCAGCACCTCGTAGGTACATGCGTACCTCCATGAGCTCGGGACAATaGTGCTTTGAGGAGAGGGAACACCTGCTCCTAAGGCCAAGGGGC +
Preference number: 2 (lower is better)
Translates to: PAPRRYMRTSMSSGQ*CFEEREHLLLRPRG
Trigger: GCCCCTTGGCCTTAGGAGCAGGTGTTCCCTCTCCTCAAAGCACAATTGTCCCGAGCTCATGGAGGTACGCATGTACCTACGAGGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR TCA 90 bp ACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGCGGGACAATTGTGCTTTaGGGAGAGGGAACACCTGCT +
Preference number: 2 (lower is better)
Translates to: TWRVRPGHSAGTQYKARGGTIVL*GEGTPA
Trigger: AGCAGGTGTTCCCTCTCCTCAAAGCACAATTGTCCC...GCCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR TCA 90 bp GAGGGGCTGGCCCTCCATGGGCTTTCGCCGTCTTTGTCTTGGGAGACGGGGTGGCAAGCTTGCTTGGATTaGAAATCAAGGTCTAACTCT +
Preference number: 2 (lower is better)
Translates to: EGLALHGLSPSLSWETGWQACLD*KSRSNS
Trigger: AGAGTTAGACCTTGATTTTCAATCCAAGCAAGCTTG...CCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp CCGGACTCCCGCCAGCCAGGGGAAAGGGTAGGTTGGGTGGTGGTTCGTTTCTTCGCCCCCAAGCTTGCTTaGATTGAAAATCAAGGTCTA +
Preference number: 2 (lower is better)
Translates to: PDSRQPGERVGWVVVRFFAPKLA*IENQGL
Trigger: TAGACCTTGATTTTCAATCCAAGCAAGCTTGGGGGC...GAAGAAACGAACCACCACCCAACCTACCCTTTCCCCTGGCTGGCGGGAGTCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp TTGCTATGTGTGCTGTGGATGGTGTCTCGGGGCAAGGCATTTCAACAAATAATGGCACACGCCTGGGCGTaGCCAGGGATCGCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: LLCVLWMVSRGKAFQQIMAHAWA*PGIARL
Trigger: AAGCCTGGCGATCCCTGGCCACGCCCAGGCGTGTGC...CATTATTTGTTGAAATGCCTTGCCCCGAGACACCATCCACAGCACACATAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp GAAGCCACTGTGTCAAGTGAGGATGAAGACCAGGAATGCACAACACATGCGAAGGGCTGGAACTGCAGGTaGAGGGGAGGTGGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: EATVSSEDEDQECTTHAKGWNCR*RGGGCR
Trigger: TCTGCAGCCACCTCCCCTCCACCTGCAGTTCCAGCC...CTTCGCATGTGTTGTGCATTCCTGGTCTTCATCCTCACTTGACACAGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR GCA 90 bp GAGCTCTCCTTGCTGTCCCTGAACCCTCGGGAGGAACCTAGTAGGTACATTGCGAGCTCGGGACAATTGTaGTTTGAGGAGAGGGAACAC +
Preference number: 2 (lower is better)
Translates to: ELSLLSLNPREEPSRYIASSGQL*FEEREH
Trigger: GTGTTCCCTCTCCTCAAAGCACAATTGTCCCGAGCT...CGCAATGTACCTACTAGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGAGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp TGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGACTGAGAGAGAGGGGCTaGCCCTCCATGGGCTTTCGC +
Preference number: 2 (lower is better)
Translates to: WESSFGIKASDMDLEVSGLRERG*PSMGFR
Trigger: GCGAAAGCCCATGGAGGGCCAGCCCCTCTCTCTCAG...TCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp TGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGACCCCACCCCAGACCTTaGACAGAACCTTGGGAGCGG +
Preference number: 2 (lower is better)
Translates to: WESSFGIKASDMDLEVSGPHPRP*TEPWER
Trigger: CCGCTCCCAAGGTTCTGTCCAAGGTCTGGGGTGGGG...TCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000239036.2
3UTR-3UTR TCA 90 bp GGGTCAAGGTTGGGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGTCTCCTTGCTGTCCCTaGACCCTCGGGAGGAACCTA +
Preference number: 2 (lower is better)
Translates to: GSRLGFGSPRLELKPVTWSPCCP*TLGRNL
Trigger: TAGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGAGA...CCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCTTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR GCA 90 bp TTGATTCAGGAACACTGTGTGCCAATTTCACTTCATTCTGCAGCTAGGCACACGCCACCAGCTTTGGCATaGCCAGAGCCAAGGCCACCC +
Preference number: 2 (lower is better)
Translates to: LIQEHCVPISLHSAARHTPPALA*PEPRPP
Trigger: GGGTGGCCTTGGCTCTGGGCATGCCAAAGCTGGTGG...CGTGTGCCTAGCTGCAGAATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR GCA 90 bp CCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGGCTGTGGGGGATTCAGGAAAGCAGCAATaGAAAGATTGCGCCAGATGG +
Preference number: 2 (lower is better)
Translates to: PEPIDDVGDPEWRWAVGDSGKQQ*KDCARW
Trigger: CCATCTGGCGCAATCTTTGCATTGCTGCTTTCCTGA...ATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR-3UTR GCA 90 bp CCACTGTGCAGTTATAAGGCCAGAACATCAAGGCGAGTTAAACTAGGAATCTCACCACCAGCTTTGGCATaGCCAGAGCCAAGGCCACCC +
Preference number: 2 (lower is better)
Translates to: PLCSYKARTSRRVKLGISPPALA*PEPRPP
Trigger: GGGTGGCCTTGGCTCTGGGCATGCCAAAGCTGGTGG...TGAGATTCCTAGTTTAACTCGCCTTGATGTTCTGGCCTTATAACTGCACAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp GAAGCCACTGTGTCAAGTGAGGATGAAGACCAGGAATGCACAACACATGCGAAGGTATTCCACCAGCTTTaGCATGCCCAGAGCCAAGGC +
Preference number: 2 (lower is better)
Translates to: EATVSSEDEDQECTTHAKVFHQL*HAQSQG
Trigger: GCCTTGGCTCTGGGCATGCCAAAGCTGGTGGAATAC...CTTCGCATGTGTTGTGCATTCCTGGTCTTCATCCTCACTTGACACAGTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp CCACTGTGCAGTTATAAGGCCAGAACATCAAGGCGAGTTAAACTAGGAATCTCACTGAGAGAGAGGGGCTaGCCCTCCATGGGCTTTCGC +
Preference number: 2 (lower is better)
Translates to: PLCSYKARTSRRVKLGISLRERG*PSMGFR
Trigger: GCGAAAGCCCATGGAGGGCCAGCCCCTCTCTCTCAG...TGAGATTCCTAGTTTAACTCGCCTTGATGTTCTGGCCTTATAACTGCACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 90 bp CTGAACCCTCGGGAGGAACCTAGTAGGTACATTGCGACAGTTTTATaGAGTGCGTCAGCGCCAACAACAATTCACTGGGTAACACTGCCC +
Preference number: 2 (lower is better)
Translates to: LNPREEPSRYIATVL*SASAPTTIHWVTLP
Trigger: GGGCAGTGTTACCCAGTGAATTGTTGTTGGCGCTGACGCACTCAATAAAACTGTCGCAATGTACCTACTAGGTTCCTCCCGAGGGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 90 bp CAATTTAGGCTCCTTCTGGTCTGGCTAATGAAGCGTGTGGTGGCTTaGCTATGTGTGCTGTGGATGGTGTCTCGGGGCAAGGCATTTCAA +
Preference number: 2 (lower is better)
Translates to: QFRLLLVWLMKRVVA*LCVLWMVSRGKAFQ
Trigger: TTGAAATGCCTTGCCCCGAGACACCATCCACAGCACACATAGCAAAGCCACCACACGCTTCATTAGCCAGACCAGAAGGAGCCTAAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp TGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGTGGGGGTCAAGGTTaGGTTTTGGGAGTCCTCGTT +
Preference number: 2 (lower is better)
Translates to: WESSFGIKASDMDLEVSGGGGQG*VLGVLV
Trigger: AACGAGGACTCCCAAAACCCAACCTTGACCCCCACC...TCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000239036.2
3UTR-3UTR CCA 90 bp GTTTGCTGTTCGAGGCTAATGATAAAGATGGGTGTGGGGTGTCTGAGAGATTTCGGTCAGCTCCCTGGCTaGCTAGAGGACATGCATGCT +
Preference number: 2 (lower is better)
Translates to: VCCSRLMIKMGVGCLRDFGQLPG*LEDMHA
Trigger: AGCATGCATGTCCTCTAGCCAGCCAGGGAGCTGACC...GAAATCTCTCAGACACCCCACACCCATCTTTATCATTAGCCTCGAACAGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 90 bp GAGACTTTAGGTGGCCGACCAACGGTGCTTCCAAGGGGGTGGAATTaGATTCAGGAACACTGTGTGCCAATTTCACTTCATTCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: ETLGGRPTVLPRGWN*IQEHCVPISLHSAA
Trigger: AGCTGCAGAATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAAATTCCACCCCCTTGGAAGCACCGTTGGTCGGCCACCTAAAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR TCA 90 bp TTGCTATGTGTGCTGTGGATGGTGTCTCGGGGCAAGGCATTTCAACAAATAATGGTGCAGCCCCTTCCCTaGTCTCTCCAGTGGTATCAT +
Preference number: 2 (lower is better)
Translates to: LLCVLWMVSRGKAFQQIMVQPLP*SLQWYH
Trigger: ATGATACCACTGGAGAGATCAGGGAAGGGGCTGCAC...CATTATTTGTTGAAATGCCTTGCCCCGAGACACCATCCACAGCACACATAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR TCA 90 bp GTTTGCTGTTCGAGGCTAATGATAAAGATGGGTGTGGGGTGTCTGAGAGATTTCGGGACAATTGTGCTTTaGGGAGAGGGAACACCTGCT +
Preference number: 2 (lower is better)
Translates to: VCCSRLMIKMGVGCLRDFGTIVL*GEGTPA
Trigger: AGCAGGTGTTCCCTCTCCTCAAAGCACAATTGTCCC...GAAATCTCTCAGACACCCCACACCCATCTTTATCATTAGCCTCGAACAGCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR TCA 90 bp CCTCGTAGGTACATGCGTACCTCCATGAGCTCGGGACAATTGTGCTTTGAGGAGTGCCTGATTAGGGTGTaGAATGAACACTCTTCTTCT +
Preference number: 2 (lower is better)
Translates to: PRRYMRTSMSSGQLCFEECLIRV*NEHSSS
Trigger: AGAAGAAGAGTGTTCATTTCACACCCTAATCAGGCA...CTCCTCAAAGCACAATTGTCCCGAGCTCATGGAGGTACGCATGTACCTACGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp ACAGTTTACAGTGGACAGGAATTACAAAGTTGTGGCCATCCCATCAGCCAGCGTCTCACCATTTCCCAATaGAGGAGTGTGCACTTTCCC +
Preference number: 2 (lower is better)
Translates to: TVYSGQELQSCGHPISQRLTISQ*RSVHFP
Trigger: GGGAAAGTGCACACTCCTCCATTGGGAAATGGTGAG...ACGCTGGCTGATGGGATGGCCACAACTTTGTAATTCCTGTCCACTGTAAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp CCACTGTGCAGTTATAAGGCCAGAACATCAAGGCGAGTTAAACTAGGAATCTCAAATGGAGATGGGCTGTaGGGGATGGAGCTCTCCTTG +
Preference number: 2 (lower is better)
Translates to: PLCSYKARTSRRVKLGISNGDGL*GMELSL
Trigger: CAAGGAGAGCTCCATCCCCCACAGCCCATCTCCATT...TGAGATTCCTAGTTTAACTCGCCTTGATGTTCTGGCCTTATAACTGCACAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR TCA 90 bp GTTTGCTGTTCGAGGCTAATGATAAAGATGGGTGTGGGGTGTCTGAGAGATTTCCTCAAAGGCCCTTCTTaGAGACTCTCACCATTTCCC +
Preference number: 2 (lower is better)
Translates to: VCCSRLMIKMGVGCLRDFLKGPS*RLSPFP
Trigger: GGGAAATGGTGAGAGTCTTCAAGAAGGGCCTTTGAG...GAAATCTCTCAGACACCCCACACCCATCTTTATCATTAGCCTCGAACAGCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR TCA 90 bp GGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTGTCAGGCAGACTGACTaGAACCAAAGGGTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: GFGSPRLELKPVTWIWKCVRQTD*NQRVLL
Trigger: CAGAAGGACCCTTTGGTTTCAGTCAGTCTGCCTGAC...ACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR-3UTR GCA 90 bp GAGGTTTGCTGTTCGAGGCTAATGATAAAGATGGGTGTGGGGTGTCTGAGAGATACATGTCCTGTGTGTTaGTGGCTTGCGTTGAAAGAC +
Preference number: 2 (lower is better)
Translates to: EVCCSRLMIKMGVGCLRDTCPVC*WLALKD
Trigger: GTCTTTCAACGCAAGCCAGCAACACACAGGACATGT...ATCTCTCAGACACCCCACACCCATCTTTATCATTAGCCTCGAACAGCAAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR GCA 90 bp GGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCAGCAATGCAAAGATTaGGCCAGATGGCAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: GFGSPRLELKPVTWIWKCQQCKD*ARWQRG
Trigger: CCCTCTCTGCCATCTGGCGCAATCTTTGCATTGCTG...ACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTATATGTTCCCAAGGTTaGCCTTTCCCGTATTCTCAA +
Preference number: 2 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSICSQG*PFPYSQ
Trigger: TTGAGAATACGGGAAAGGCCAACCTTGGGAACATAT...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR GCA 90 bp TGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGACAGTACAAACCACTGTaGAGTTATAAGGCCAGAACA +
Preference number: 2 (lower is better)
Translates to: WESSFGIKASDMDLEVSGQYKPL*SYKART
Trigger: TGTTCTGGCCTTATAACTGCACAGTGGTTTGTACTG...TCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR TCA 90 bp TGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGACAAGCTTGCTTGGATTaGAAATCAAGGTCTAACTCT +
Preference number: 2 (lower is better)
Translates to: WESSFGIKASDMDLEVSGQACLD*KSRSNS
Trigger: AGAGTTAGACCTTGATTTTCAATCCAAGCAAGCTTG...TCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CCA 90 bp GGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTATATGTTCCCAAGGTTaGCCTTTCCCGTATTCTCAA +
Preference number: 2 (lower is better)
Translates to: GFGSPRLELKPVTWIWKCICSQG*PFPYSQ
Trigger: TTGAGAATACGGGAAAGGCCAACCTTGGGAACATAT...ACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 72 bp ACACCCTCTCCCAAGGCCCCTCTGAGAGAGAGGGGCTaGCCCTCCATGGGCTTTCGCCGTCTTTGTCTTGGG +
Preference number: 3 (lower is better)
Translates to: TPSPKAPLRERG*PSMGFRRLCLG
Trigger: CCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCCTCTCTCTCAGAGGGGCCTTGGGAGAGGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp CCAGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCGGGACAATTGTGCTTaGAGGAGAGGGAACACCTGC +
Preference number: 3 (lower is better)
Translates to: PDLGQNLGSGGGGDHGAARDNCA*RRGNTC
Trigger: GCAGGTGTTCCCTCTCCTCAAAGCACAATTGTCCCG...GGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR GCA 72 bp TGGTCAGCTCCCTGGCTGGCTAGAGGACATGCATGCTaGCCAGTTGCTCCCGCTCCTTTCCCCTGTCTCTCG +
Preference number: 3 (lower is better)
Translates to: WSAPWLARGHAC*PVAPAPFPCLS
Trigger: CGAGAGACAGGGGAAAGGAGCGGGAGCAACTGGGCAGCATGCATGTCCTCTAGCCAGCCAGGGAGCTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR GCA 72 bp GATTGGTCAGCTCCCTGGCTGGCTAGAGGACATGCATaGTGCCCAGTTGCTCCCGCTCCTTTCCCCTGTCTC +
Preference number: 3 (lower is better)
Translates to: DWSAPWLARGHA*CPVAPAPFPCL
Trigger: GAGACAGGGGAAAGGAGCGGGAGCAACTGGGCAGCATGCATGTCCTCTAGCCAGCCAGGGAGCTGACCAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 72 bp CACACGCCTGGGCGTGGCCAGGGATCGCCAGGCTTCTaGTTCAGTAATCTCCCCAGAGCAAAACTTGGCGAG +
Preference number: 3 (lower is better)
Translates to: HTPGRGQGSPGF*FSNLPRAKLGE
Trigger: CTCGCCAAGTTTTGCTCTGGGGAGATTACTGAACCAGAAGCCTGGCGATCCCTGGCCACGCCCAGGCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 72 bp GGGCTGGCCCTCCATGGGCTTTCGCCGTCTTTGTCTTaGGAGACGGGGTGGCCATCGCTTTGGCAAAGAAAG +
Preference number: 3 (lower is better)
Translates to: GLALHGLSPSLS*ETGWPSLWQRK
Trigger: CTTTCTTTGCCAAAGCGATGGCCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR GCA 72 bp AGGTCAGAAAGCCTGTCAGGGCTACACTCTAATGCGTaGAGGCTGGAACTGCAGGTGGAGGGGAGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: RSESLSGLHSNA*RLELQVEGRWL
Trigger: CAGCCACCTCCCCTCCACCTGCAGTTCCAGCCTGCACGCATTAGAGTGTAGCCCTGACAGGCTTTCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR GCA 72 bp CGGAGGCTCAGGGGTCACTTCACTGCGGCCAGCCTTTaGAGCAATTTCTTGCCTCTGGAGAGCAGCCCTTTT +
Preference number: 3 (lower is better)
Translates to: RRLRGHFTAASL*SNFLPLESSPF
Trigger: AAAAGGGCTGCTCTCCAGAGGCAAGAAATTGCTGCAAAGGCTGGCCGCAGTGAAGTGACCCCTGAGCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 72 bp GTTTTATTGAGTGCGTCAGCGCCAACAACAATTCACTaGGTAACACTGCCCCGGACTCCCGCCAGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: VLLSASAPTTIH*VTLPRTPASQG
Trigger: CCCCTGGCTGGCGGGAGTCCGGGGCAGTGTTACCCAGTGAATTGTTGTTGGCGCTGACGCACTCAATAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 72 bp GAACCCATAGATGACGTAGGTGACCCCGAATGGAGATaGGCTGTGGGGGATGGAGCTCTCCTTGCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: EPIDDVGDPEWR*AVGDGALLAVP
Trigger: AGGGACAGCAAGGAGAGCTCCATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR TCA 72 bp TGTGCACTTTCCCCAGCACAGAGAGACGGTGGGCTTTaGGAGACTTTAGGTGGCCGACCAACGGTGCTTCCA +
Preference number: 3 (lower is better)
Translates to: CALSPAQRDGGL*ETLGGRPTVLP
Trigger: TGGAAGCACCGTTGGTCGGCCACCTAAAGTCTCTCAAAGCCCACCGTCTCTCTGTGCTGGGGAAAGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR TCA 72 bp AGGCCAGGGGAAGACCCTGGGGTCAGGCAGACTGACTaGAACCAAAGGGTCCTTCTGTGGAACACCAACTTG +
Preference number: 3 (lower is better)
Translates to: RPGEDPGVRQTD*NQRVLLWNTNL
Trigger: CAAGTTGGTGTTCCACAGAAGGACCCTTTGGTTTCAGTCAGTCTGCCTGACCCCAGGGTCTTCCCCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR CCA 72 bp CTACCAGAACCCATAGATGACGTAGGTGACCCCGAATaGAGATGGGCTGTGGGGGATGGAGCTCTCCTTGCT +
Preference number: 3 (lower is better)
Translates to: LPEPIDDVGDPE*RWAVGDGALLA
Trigger: AGCAAGGAGAGCTCCATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 72 bp AGGACACTAAAGGCAAAGATTGGTCAGCTCCCTGGCTaGCTAGAGGACATGCATGCTGCCCAGTTGCTCCCG +
Preference number: 3 (lower is better)
Translates to: RTLKAKIGQLPG*LEDMHAAQLLP
Trigger: CGGGAGCAACTGGGCAGCATGCATGTCCTCTAGCCAGCCAGGGAGCTGACCAATCTTTGCCTTTAGTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp GAAGCCACTGTGTCAAGTGAGGATGAAGACCAGGAATGCACAACACATGCGAAGGGGATGGAGCTCTCCTaGCTGTCCCTGAACCCTCGG +
Preference number: 3 (lower is better)
Translates to: EATVSSEDEDQECTTHAKGMELS*LSLNPR
Trigger: CCGAGGGTTCAGGGACAGCAAGGAGAGCTCCATCCC...CTTCGCATGTGTTGTGCATTCCTGGTCTTCATCCTCACTTGACACAGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp GAGCAAAACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCATGAGCTCGGGACAATaGTGCTTTGAGGAGAGGGAA +
Preference number: 3 (lower is better)
Translates to: EQNLASETRALSGHTIQGMSSGQ*CFEERE
Trigger: TTCCCTCTCCTCAAAGCACAATTGTCCCGAGCTCAT...GCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGTTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR TCA 72 bp GTATGCCAGCACCTCGTAGGTACATGCGTACCTCCATaGGCTCGGGACAATTGTGCTTTGAGGAGAGGGAAC +
Preference number: 3 (lower is better)
Translates to: VCQHLVGTCVPP*ARDNCALRRGN
Trigger: GTTCCCTCTCCTCAAAGCACAATTGTCCCGAGCTCATGGAGGTACGCATGTACCTACGAGGTGCTGGCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR TCA 72 bp AGACAGGCATCTGAAAGTGTAGGGCCTGGGCCACTGTaGGGTGAAGCCACTGTGTCAAGTGAGGATGAAGAC +
Preference number: 3 (lower is better)
Translates to: RQASESVGPGPL*GEATVSSEDED
Trigger: GTCTTCATCCTCACTTGACACAGTGGCTTCACCTCACAGTGGCCCAGGCCCTACACTTTCAGATGCCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp TTGCTATGTGTGCTGTGGATGGTGTCTCGGGGCAAGGCATTTCAACAAATAATGGGGCTTTCGCCGTCTTaGTCTTGGGAGACGGGGTGG +
Preference number: 3 (lower is better)
Translates to: LLCVLWMVSRGKAFQQIMGLSPS*SWETGW
Trigger: CCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCC...CATTATTTGTTGAAATGCCTTGCCCCGAGACACCATCCACAGCACACATAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp CCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGGCTGTGGGGGATAATATGTTCCCAAGGTaGGCCTTTCCCGTATTCTCA +
Preference number: 3 (lower is better)
Translates to: PEPIDDVGDPEWRWAVGDNMFPR*AFPVFS
Trigger: TGAGAATACGGGAAAGGCCAACCTTGGGAACATATT...ATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp GAGGTTTGCTGTTCGAGGCTAATGATAAAGATGGGTGTGGGGTGTCTGAGAGATGCCAGTGACATGGATTaGGAAGTGTCCGGAGGCTCA +
Preference number: 3 (lower is better)
Translates to: EVCCSRLMIKMGVGCLRDASDMD*EVSGGS
Trigger: TGAGCCTCCGGACACTTCCAAATCCATGTCACTGGC...ATCTCTCAGACACCCCACACCCATCTTTATCATTAGCCTCGAACAGCAAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 72 bp AGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTaGAAGTGTCCGGAGGCTCAGGGGTCACTTCACTGC +
Preference number: 3 (lower is better)
Translates to: SPRLELKPVTWI*KCPEAQGSLHC
Trigger: GCAGTGAAGTGACCCCTGAGCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp GGGTCAAGGTTGGGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGGCTCAAAGGCCCTTCTaGAAGACTCTCACCATTTCC +
Preference number: 3 (lower is better)
Translates to: GSRLGFGSPRLELKPVTWAQRPF*KTLTIS
Trigger: GGAAATGGTGAGAGTCTTCAAGAAGGGCCTTTGAGC...CCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCTTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp AATGAAGCGTGTGGTGGCTTTGCTATGTGTGCTGTGGATGGTGTCTCGGGGCAATTTGGGAGTCCTCGTTaGGAATTAAAGCCAGTGACA +
Preference number: 3 (lower is better)
Translates to: NEACGGFAMCAVDGVSGQFGSPR*ELKPVT
Trigger: TGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAA...TTGCCCCGAGACACCATCCACAGCACACATAGCAAAGCCACCACACGCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR TCA 72 bp GTGGCCGACCAACGGTGCTTCCAAGGGGGTGGAATTTaGTTCAGGAACACTGTGTGCCAATTTCACTTCATT +
Preference number: 3 (lower is better)
Translates to: VADQRCFQGGGI*FRNTVCQFHFI
Trigger: AATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAAATTCCACCCCCTTGGAAGCACCGTTGGTCGGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 72 bp ACTTTAGGTGGCCGACCAACGGTGCTTCCAAGGGGGTaGAATTTGATTCAGGAACACTGTGTGCCAATTTCA +
Preference number: 3 (lower is better)
Translates to: TLGGRPTVLPRG*NLIQEHCVPIS
Trigger: TGAAATTGGCACACAGTGTTCCTGAATCAAATTCCACCCCCTTGGAAGCACCGTTGGTCGGCCACCTAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp TTGCTATGTGTGCTGTGGATGGTGTCTCGGGGCAAGGCATTTCAACAAATAATGCTAAGGTGTCTTCGGTaGCTCACTTACGTGACGGCT +
Preference number: 3 (lower is better)
Translates to: LLCVLWMVSRGKAFQQIMLRCLR*LTYVTA
Trigger: AGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAG...CATTATTTGTTGAAATGCCTTGCCCCGAGACACCATCCACAGCACACATAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp GGGTCAAGGTTGGGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGAGTCCTACAGAAACTTaGGGGATGGCACACTGTTTG +
Preference number: 3 (lower is better)
Translates to: GSRLGFGSPRLELKPVTWSPTET*GMAHCL
Trigger: CAAACAGTGTGCCATCCCCAAAGTTTCTGTAGGACT...CCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCTTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 72 bp AAAAACAGTTTACAGTGGACAGGAATTACAAAGTTGTaGCCATCCCATCAGCCAGCGTCTGGGGAGGTTTGC +
Preference number: 3 (lower is better)
Translates to: KNSLQWTGITKL*PSHQPASGEVC
Trigger: GCAAACCTCCCCAGACGCTGGCTGATGGGATGGCCACAACTTTGTAATTCCTGTCCACTGTAAACTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACCTAAGGTGTCTTCGGTaGCTCACTTACGTGACGGCT +
Preference number: 3 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDLRCLR*LTYVTA
Trigger: AGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAG...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACTAAGGTGTCTTCGGTaGCTCACTTACGTGACGGCT +
Preference number: 3 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGLRCLR*LTYVTA
Trigger: AGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAG...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp AAGGGGGTGGAATTTGATTCAGGAACACTGTGTGCCAATTTCACTTCATTCTGCATGAGCTCGGGACAATaGTGCTTTGAGGAGAGGGAA +
Preference number: 3 (lower is better)
Translates to: KGVEFDSGTLCANFTSFCMSSGQ*CFEERE
Trigger: TTCCCTCTCCTCAAAGCACAATTGTCCCGAGCTCAT...GCAGAATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAAATTCCACCCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 72 bp GTGTCTGAGAGATTTCAATTTAGGCTCCTTCTGGTCTaGCTAATGAAGCGTGTGGTGGCTTTGCTATGTGTG +
Preference number: 3 (lower is better)
Translates to: VSERFQFRLLLV*LMKRVVALLCV
Trigger: CACACATAGCAAAGCCACCACACGCTTCATTAGCCAGACCAGAAGGAGCCTAAATTGAAATCTCTCAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CCA 72 bp AATTACAAAGTTGTGGCCATCCCATCAGCCAGCGTCTaGGGAGGTTTGCTGTTCGAGGCTAATGATAAAGAT +
Preference number: 3 (lower is better)
Translates to: NYKVVAIPSASV*GGLLFEANDKD
Trigger: ATCTTTATCATTAGCCTCGAACAGCAAACCTCCCCAGACGCTGGCTGATGGGATGGCCACAACTTTGTAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp GTTTGCTGTTCGAGGCTAATGATAAAGATGGGTGTGGGGTGTCTGAGAGATTTCCGCACAGGGAAAGCTTaGCCATTCATTTACAAACCT +
Preference number: 3 (lower is better)
Translates to: VCCSRLMIKMGVGCLRDFRTGKA*PFIYKP
Trigger: AGGTTTGTAAATGAATGGCAAAGCTTTCCCTGTGCG...GAAATCTCTCAGACACCCCACACCCATCTTTATCATTAGCCTCGAACAGCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR TCA 72 bp CAATACAAGGCAAGGGGCCCCCAAGCTTGCTTGGATTaGAAATCAAGGTCTAACTCTAATGGAGAACACCTA +
Preference number: 3 (lower is better)
Translates to: QYKARGPQACLD*KSRSNSNGEHL
Trigger: TAGGTGTTCTCCATTAGAGTTAGACCTTGATTTTCAATCCAAGCAAGCTTGGGGGCCCCTTGCCTTGTATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR TCA 72 bp CTCACTTACGTGACGGCTACATGCCTGATTAGGGTGTaGAATGAACACTCTTCTTCTATGTCCAAGCAGATG +
Preference number: 3 (lower is better)
Translates to: LTYVTATCLIRV*NEHSSSMSKQM
Trigger: CATCTGCTTGGACATAGAAGAAGAGTGTTCATTTCACACCCTAATCAGGCATGTAGCCGTCACGTAAGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR GCA 72 bp TCTGTGGAACACCAACTTGTGTTGGAGCTAAGCATTTaGGGGCACAATGTCCAAAGAAGGACAGAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: SVEHQLVLELSI*GHNVQRRTEEK
Trigger: TTTTTCCTCTGTCCTTCTTTGGACATTGTGCCCGCAAATGCTTAGCTCCAACACAAGTTGGTGTTCCACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR-3UTR CAA 90 bp AAGGGGGTGGAATTTGATTCAGGAACACTGTGTGCCAATTTCACTTCATTCTGCAATATGTTCCCAAGGTaGGCCTTTCCCGTATTCTCA +
Preference number: 3 (lower is better)
Translates to: KGVEFDSGTLCANFTSFCNMFPR*AFPVFS
Trigger: TGAGAATACGGGAAAGGCCAACCTTGGGAACATATT...GCAGAATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAAATTCCACCCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR TCA 72 bp CTTAATTGTAATCTAAGGAAGCTCAAAGGCCCTTCTTaGAGACTCTCACCATTTCCCAATGGAGGAGTGTGC +
Preference number: 3 (lower is better)
Translates to: LNCNLRKLKGPS*RLSPFPNGGVC
Trigger: GCACACTCCTCCATTGGGAAATGGTGAGAGTCTTCAAGAAGGGCCTTTGAGCTTCCTTAGATTACAATTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCCGGAGCAGTCCTCGGGTaGGGGGCTGGAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: RPWTEPWERRGRGPRCSPGAVLG*GAGGTR
Trigger: CCTGGTGCCTCCAGCCCCCCACCCGAGGACTGCTCC...GGGGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GCTGGGTATTCCACCAGCTTTGGCATGCCCAGAGCCAAGGCCACCCCTTGGGGCCCGGCTGGGCGAGGGTaGCCTTCTGCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGYSTSFGMPRAKATPWGPAGRG*PSAWAS
Trigger: GCTGGCCCAGGCAGAAGGTCACCCTCGCCCAGCCGG...GCCCCAAGGGGTGGCCTTGGCTCTGGGCATGCCAAAGCTGGTGGAATACCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp TGCCCCGGACTCCCGCCAGCCAGGGGAAAGGGTAGGTTGGGTGGTGGTTCGTTTATGTGCAGGGCCCGGTaGCCGGCTCTGCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CPGLPPARGKGRLGGGSFMCRAR*PALLPG
Trigger: TCCTGGGAGCAGAGCCGGTCACCGGGCCCTGCACAT...AAACGAACCACCACCCAACCTACCCTTTCCCCTGGCTGGCGGGAGTCCGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp CCAGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCGATGTCCGACAGGTCTaGCCCCCGGCTGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PDLGQNLGSGGGGDHGAADVRQV*PPAALC
Trigger: ACAGAGAGCAGCCGGGGGTCAGACCTGTCGGACATC...GGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GAGGGGCTGGCCCTCCATGGGCTTTCGCCGTCTTTGTCTTGGGAGACGGGGTGGTCAGCTCCACTGCCGTaGCATCTGCCGTGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: EGLALHGLSPSLSWETGWSAPLP*HLPWGR
Trigger: TCGCCCCCACGGCAGATGGCACGGCAGTGGAGCTGA...CCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCCGACCCCGAATGGAGATaGGCTGTGGGGGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: RPWTEPWERRGRGPRCSPDPEWR*AVGDGA
Trigger: AGCTCCATCCCCCACAGCCCATCTCCATTCGGGGTC...GGGGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENSMUST00000239036.2
CDS-3UTR TCA 90 bp GCTGGGTATTCCACCAGCTTTGGCATGCCCAGAGCCAAGGCCACCCCTTGGGGCAGTTTCCCCGGCTCGTaGCGCACTGCACGGAGATGC +
Preference number: 4 (lower is better)
Translates to: AGYSTSFGMPRAKATPWGSFPGS*RTARRC
Trigger: GCATCTCCGTGCAGTGCGTCACGAGCCGGGGAAACT...GCCCCAAGGGGTGGCCTTGGCTCTGGGCATGCCAAAGCTGGTGGAATACCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp AGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCCCCTCATCCTCCTCCATaGTGTCCGACAGGTCTGACC +
Preference number: 4 (lower is better)
Translates to: RPWTEPWERRGRGPRCSPPHPPP*CPTGLT
Trigger: GGTCAGACCTGTCGGACATCATGGAGGAGGATGAGG...GGGGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp CCCAGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCGGCACCAAGCCCCTTTaGCCATCCAGAAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PRPWTEPWERRGRGPRCSGTKPL*PSRSSP
Trigger: AGGAGAGCTTCTGGATGGGCAAAGGGGCTTGGTGCC...GCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp CCAGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCCAGCTCTGACCCTTTaGGGAAGTCATCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PDLGQNLGSGGGGDHGAAPALTL*GSHPLR
Trigger: CCTCAGTGGATGACTTCCTCAAAGGGTCAGAGCTGG...GGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GAGGGGCTGGCCCTCCATGGGCTTTCGCCGTCTTTGTCTTGGGAGACGGGGTGGAGTGACATCTTGTGGTaGGGCTGGAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EGLALHGLSPSLSWETGWSDILW*GWRSCR
Trigger: CCTGCAGGACCTCCAGCCCCACCACAAGATGTCACT...CCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGCCCCCACCACCCTCTGCCCTTTaGCGTACACGCCGTATCCTG +
Preference number: 4 (lower is better)
Translates to: ASETRALSGHTIQGKGPPPPSAL*RTRRIL
Trigger: CAGGATACGGCGTGTACGCCAAAGGGCAGAGGGTGG...TGGGGGCCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GAGCTCTCCTTGCTGTCCCTGAACCCTCGGGAGGAACCTAGTAGGTACATTGCGGGAGCAGTCCTCGGGTaGGGGGCTGGAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: ELSLLSLNPREEPSRYIAGAVLG*GAGGTR
Trigger: CCTGGTGCCTCCAGCCCCCCACCCGAGGACTGCTCC...CGCAATGTACCTACTAGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGAGAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGCCCCCAGGTGGTTCCAACATGTaGCCATGTGCAGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: ASETRALSGHTIQGKGPPGGSNM*PCAGPG
Trigger: ACCGGGCCCTGCACATGGCCACATGTTGGAACCACC...TGGGGGCCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GAGCAAAACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCATGTGCAGGGCCCGGTaGCCGGCTCTGCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: EQNLASETRALSGHTIQGMCRAR*PALLPG
Trigger: TCCTGGGAGCAGAGCCGGTCACCGGGCCCTGCACAT...GCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGTTTTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp CCTCGTAGGTACATGCGTACCTCCATGAGCTCGGGACAATTGTGCTTTGAGGAGCCGGCTGGGCGAGGGTaGCCTTCTGCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PRRYMRTSMSSGQLCFEEPAGRG*PSAWAS
Trigger: GCTGGCCCAGGCAGAAGGTCACCCTCGCCCAGCCGG...CTCCTCAAAGCACAATTGTCCCGAGCTCATGGAGGTACGCATGTACCTACGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCCATCTGCATCTTGGGCTaGTGGATCGCAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RPWTEPWERRGRGPRCSPICILG*WIARGR
Trigger: CCTTCCTCTTGCGATCCAGCAGCCCAAGATGCAGAT...GGGGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TGCCCCGGACTCCCGCCAGCCAGGGGAAAGGGTAGGTTGGGTGGTGGTTCGTTTTGCCCACCAGCAGAGTaGACTGCAGCTCGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: CPGLPPARGKGRLGGGSFCPPAE*TAARLS
Trigger: ACTCAGACGAGCTGCAGTGCACTCTGCTGGTGGGCA...AAACGAACCACCACCCAACCTACCCTTTCCCCTGGCTGGCGGGAGTCCGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp ACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGCCCCAGTGGGAGTCAGTaGAGGGGGCTTCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: TWRVRPGHSAGTQYKARGPSGSQ*RGLPGD
Trigger: GTCTCCTGGAAGCCCCCTGCACTGACTCCCACTGGG...GCCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCCACTGCGGCCAGCCTTTaGAGCAATTTCTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RPWTEPWERRGRGPRCSPTAASL*SNFLPL
Trigger: CAGAGGCAAGAAATTGCTGCAAAGGCTGGCCGCAGT...GGGGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000239036.2
CDS-3UTR CCA 90 bp GCTGGGTATTCCACCAGCTTTGGCATGCCCAGAGCCAAGGCCACCCCTTGGGGCGCCTGCTGCAGTAGCTaGATCTCCTGCTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: AGYSTSFGMPRAKATPWGACCSS*ISCCLA
Trigger: TGCCAAGCAGCAGGAGATCCAGCTACTGCAGCAGGC...GCCCCAAGGGGTGGCCTTGGCTCTGGGCATGCCAAAGCTGGTGGAATACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 72 bp AGAGAGGGGCTGGCCCTCCATGGGCTTTCGCCGTCTTaGTCTTGGGAGACGGGGTGGCCATCGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: REGLALHGLSPS*SWETGWPSLWQ
Trigger: TTGCCAAAGCGATGGCCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 72 bp CTCCCTGGCTGGCTAGAGGACATGCATGCTGCCCAGTaGCTCCCGCTCCTTTCCCCTGTCTCTCGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LPGWLEDMHAAQ*LPLLSPVSRVV
Trigger: CACCACACGAGAGACAGGGGAAAGGAGCGGGAGCAACTGGGCAGCATGCATGTCCTCTAGCCAGCCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCCGGCTGGGCGAGGGTaGCCTTCTGCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCPAGRG*PSAWAS
Trigger: GCTGGCCCAGGCAGAAGGTCACCCTCGCCCAGCCGG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCCGGCTGGGCGAGGGTaGCCTTCTGCCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLPAGRG*PSAWAS
Trigger: GCTGGCCCAGGCAGAAGGTCACCCTCGCCCAGCCGG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGCCCCCACCAGCTCTGACCCTTTaGGGAAGTCATCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: ASETRALSGHTIQGKGPPPALTL*GSHPLR
Trigger: CCTCAGTGGATGACTTCCTCAAAGGGTCAGAGCTGG...TGGGGGCCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCCTCTCGGACTCAAATCTaGATCTTGGGCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: RPWTEPWERRGRGPRCSPSRTQI*ILGCWI
Trigger: GATCCAGCAGCCCAAGATGCAGATTTGAGTCCGAGA...GGGGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTCCGGAGGCTCAGGGGTCACTTCACTGCGGCCAGCCTTTGCAGCAATTTCTTGCGGGCCACACACAGGTaGACCTTCCCCGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VRRLRGHFTAASLCSNFLRATHR*TFPELL
Trigger: AAGCAGCTCGGGGAAGGTGCACCTGTGTGTGGCCCG...CAAGAAATTGCTGCAAAGGCTGGCCGCAGTGAAGTGACCCCTGAGCCTCCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGCCCCCATCCTTCTTTTCTCTCTaGTCCAGCGGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ASETRALSGHTIQGKGPPSFFSL*SSGSCQ
Trigger: CTGGCAGCTGCCGCTGGAGCAGAGAGAAAAGAAGGA...TGGGGGCCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTCCGGAGGCTCAGGGGTCACTTCACTGCGGCCAGCCTTTGCAGCAATTTCTTGTGGGGCTGGAGGTCCTaGAGGCAGCGTGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: VRRLRGHFTAASLCSNFLWGWRS*RQRGEL
Trigger: GAGTTCTCCACGCTGCCTGCAGGACCTCCAGCCCCA...CAAGAAATTGCTGCAAAGGCTGGCCGCAGTGAAGTGACCCCTGAGCCTCCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp CCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGGCTGTGGGGGATCCGGATCAGCTCCACTaGCGTGCCATCTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PEPIDDVGDPEWRWAVGDPDQLH*RAICRG
Trigger: CCCACGGCAGATGGCACGGCAGTGGAGCTGATCCGG...ATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp CCAGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCTGGGTTTGGGGACATaGTCAGTGGGTCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: PDLGQNLGSGGGGDHGAALGLGT*SVGHSQ
Trigger: TTGACTATGACCCACTGACCATGTCCCCAAACCCAG...GGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TGTGCACCTACCTACTGTGCAGGCCAGGGGAAGACCCTGGGGTCAGGCAGACTGAGCAGCGTCTGGGTTTaGGGACATGGTCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: CAPTYCAGQGKTLGSGRLSSVWV*GHGQWV
Trigger: GACCCACTGACCATGTCCCCAAACCCAGACGCTGCT...CAGTCTGCCTGACCCCAGGGTCTTCCCCTGGCCTGCACAGTAGGTAGGTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR CAA 72 bp GGGGCTGGCCCTCCATGGGCTTTCGCCGTCTTTGTCTaGGGAGACGGGGTGGCCATCGCTTTGGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GAGPPWAFAVFV*GDGVAIALAKK
Trigger: TTTCTTTGCCAAAGCGATGGCCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 72 bp CCGAATGGAGATGGGCTGTGGGGGATGGAGCTCTCCTaGCTGTCCCTGAACCCTCGGGAGGAACCTAGTAGG +
Preference number: 4 (lower is better)
Translates to: PNGDGLWGMELS*LSLNPREEPSR
Trigger: CCTACTAGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGAGAGCTCCATCCCCCACAGCCCATCTCCATTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCCGTGGGGGCGATaGCCTCAGCCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCLPWGR*PQPPSA
Trigger: GGCAGAGGGTGGCTGAGGTCATCGCCCCCACGGCAG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp TGGCTTGCGTTGAAAGACCCAAGACAGGCATCTGAAAGTGTAGGGCCTGGGCCATGCTCCAGCGGCAGCTaGCAGGGCATCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: WLALKDPRQASESVGPGPCSSGS*QGIWCG
Trigger: GCCACACCAGATGCCCTGGCAGCTGCCGCTGGAGCA...TGGCCCAGGCCCTACACTTTCAGATGCCTGTCTTGGGTCTTTCAACGCAAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GAGCAAAACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCCCCAGTGGGAGTCAGTaGAGGGGGCTTCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: EQNLASETRALSGHTIQGPSGSQ*RGLPGD
Trigger: GTCTCCTGGAAGCCCCCTGCACTGACTCCCACTGGG...GCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGTTTTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp CCCAGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCTTTTCTCTAACCTGTTaGTCTCAGCCACCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PRPWTEPWERRGRGPRCSFSLTC*SQPPSV
Trigger: CACAGAGGGTGGCTGAGAGCAACAGGTTAGAGAAAA...GCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp CCAGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCTATATTGCCCCGCACTaGTTTGCTCTAGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PDLGQNLGSGGGGDHGAAYIAPH*FALERG
Trigger: GCCTCTTTCTAGAGCAAAGCAGTGCGGGGCAATATA...GGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp ACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGCGGTCTGACCCCCGGCTaGTCTCTGTGTGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: TWRVRPGHSAGTQYKARGGLTPG*SLCGTH
Trigger: ATGAGTACCACACAGAGAGCAGCCGGGGGTCAGACC...GCCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp CCCAGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCTTTGCAGCAATTTCTTaGCTCTGGAGAGCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PRPWTEPWERRGRGPRCSFAAIS*LWRAAL
Trigger: AAGGGCTGCTCTCCAGAGGCAAGAAATTGCTGCAAA...GCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000239036.2
CDS-3UTR CCA 90 bp GTGCCAATTTCACTTCATTCTGCAGCTAGGCACACGCCTGGGCGTGGCCAGGGATTGTCCACACGCAGCTaGGACGGTGCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: VPISLHSAARHTPGRGQGLSTRS*DGATTT
Trigger: TGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGACAA...TCCCTGGCCACGCCCAGGCGTGTGCCTAGCTGCAGAATGAAGTGAAATTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGTTGTCCACACGCAGCTaGGACGGTGCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: NLASETRALSGHTIQGKGLSTRS*DGATTT
Trigger: TGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGACAA...CCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp CCAGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCATTGGTACTTGTACCTaGCTGCCTTCACGATGTCCA +
Preference number: 4 (lower is better)
Translates to: PDLGQNLGSGGGGDHGAAIGTCT*LPSRCP
Trigger: TGGACATCGTGAAGGCAGCCAGGTACAAGTACCAAT...GGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGGGAGCAGTCCTCGGGTaGGGGGCTGGAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLGAVLG*GAGGTR
Trigger: CCTGGTGCCTCCAGCCCCCCACCCGAGGACTGCTCC...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
3UTR CAA 72 bp CCGGAGGCTCAGGGGTCACTTCACTGCGGCCAGCCTTaGCAGCAATTTCTTGCCTCTGGAGAGCAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PEAQGSLHCGQP*QQFLASGEQPF
Trigger: AAAGGGCTGCTCTCCAGAGGCAAGAAATTGCTGCAAAGGCTGGCCGCAGTGAAGTGACCCCTGAGCCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp TGTGCACCTACCTACTGTGCAGGCCAGGGGAAGACCCTGGGGTCAGGCAGACTGAGTCCATTCATGTACTaGGGGAAAGGCTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: CAPTYCAGQGKTLGSGRLSPFMY*GKGLPG
Trigger: CCCTGGCAAGCCTTTCCCTCAGTACATGAATGGACT...CAGTCTGCCTGACCCCAGGGTCTTCCCCTGGCCTGCACAGTAGGTAGGTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GAAGCCACTGTGTCAAGTGAGGATGAAGACCAGGAATGCACAACACATGCGAAGCTGCCGTGGGGGCGATaGCCTCAGCCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: EATVSSEDEDQECTTHAKLPWGR*PQPPSA
Trigger: GGCAGAGGGTGGCTGAGGTCATCGCCCCCACGGCAG...CTTCGCATGTGTTGTGCATTCCTGGTCTTCATCCTCACTTGACACAGTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp CAGCTGGGTATTCCACCAGCTTTGGCATGCCCAGAGCCAAGGCCACCCCTTGGGCCTTGCCTCAGCAGCTaGTCCATCATCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: QLGIPPALACPEPRPPLGPCLSS*SIISSS
Trigger: TGATGAGGAGATGATGGATCAGCTGCTGAGGCAAGG...CCCAAGGGGTGGCCTTGGCTCTGGGCATGCCAAAGCTGGTGGAATACCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp CCGGACTCCCGCCAGCCAGGGGAAAGGGTAGGTTGGGTGGTGGTTCGTTTCTTCATCTGCATCTTGGGCTaGTGGATCGCAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PDSRQPGERVGWVVVRFFICILG*WIARGR
Trigger: CCTTCCTCTTGCGATCCAGCAGCCCAAGATGCAGAT...GAAGAAACGAACCACCACCCAACCTACCCTTTCCCCTGGCTGGCGGGAGTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TCCTTGCTGTCCCTGAACCCTCGGGAGGAACCTAGTAGGTACATTGCGACAGTTTGCTCCAGCGGCAGCTaGCAGGGCATCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLLSLNPREEPSRYIATVCSSGS*QGIWCG
Trigger: GCCACACCAGATGCCCTGGCAGCTGCCGCTGGAGCA...AACTGTCGCAATGTACCTACTAGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GAGGGGCTGGCCCTCCATGGGCTTTCGCCGTCTTTGTCTTGGGAGACGGGGTGGAGACTGATGCCAGAGTaGTTGAGAAAGTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: EGLALHGLSPSLSWETGWRLMPE*LRKFWS
Trigger: GGACCAGAACTTTCTCAACCACTCTGGCATCAGTCT...CCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTGCCAATTTCACTTCATTCTGCAGCTAGGCACACGCCTGGGCGTGGCCAGGGAGGCATCTGGTGTGGCTaGGCCAAGACCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: VPISLHSAARHTPGRGQGGIWCG*AKTFTL
Trigger: CAAGGTGAAGGTCTTGGCCCAGCCACACCAGATGCC...TCCCTGGCCACGCCCAGGCGTGTGCCTAGCTGCAGAATGAAGTGAAATTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCGGAGCAGTCCTCGGGTaGGGGGCTGGAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGGAVLG*GAGGTR
Trigger: CCTGGTGCCTCCAGCCCCCCACCCGAGGACTGCTCC...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GAGGGGCTGGCCCTCCATGGGCTTTCGCCGTCTTTGTCTTGGGAGACGGGGTGGCTCATCATAGAAGTCTaGAGAAAGATGGTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: EGLALHGLSPSLSWETGWLIIEV*RKMVSP
Trigger: GGGCGAGACCATCTTTCTCCAGACTTCTATGATGAG...CCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCCTCCTCATCATCCGCATaGATCTCAGAGACCATGTTA +
Preference number: 4 (lower is better)
Translates to: RPWTEPWERRGRGPRCSPSSSSA*ISETML
Trigger: TAACATGGTCTCTGAGATCCATGCGGATGATGAGGA...GGGGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCTGCCGTGGGGGCGATaGCCTCAGCCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDLPWGR*PQPPSA
Trigger: GGCAGAGGGTGGCTGAGGTCATCGCCCCCACGGCAG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACCTGCCGTGGGGGCGATaGCCTCAGCCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYLPWGR*PQPPSA
Trigger: GGCAGAGGGTGGCTGAGGTCATCGCCCCCACGGCAG...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTATGTGCAGGGCCCGGTaGCCGGCTCTGCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSMCRAR*PALLPG
Trigger: TCCTGGGAGCAGAGCCGGTCACCGGGCCCTGCACAT...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCATGTGCAGGGCCCGGTaGCCGGCTCTGCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGMCRAR*PALLPG
Trigger: TCCTGGGAGCAGAGCCGGTCACCGGGCCCTGCACAT...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GTGCCAATTTCACTTCATTCTGCAGCTAGGCACACGCCTGGGCGTGGCCAGGGACTGCTTGCCCAGCTCTaGCCCTTTGAGGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: VPISLHSAARHTPGRGQGLLAQL*PFEEVI
Trigger: GATGACTTCCTCAAAGGGTCAGAGCTGGGCAAGCAG...TCCCTGGCCACGCCCAGGCGTGTGCCTAGCTGCAGAATGAAGTGAAATTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp ACCCTCTCCCAAGGCCCCTCTGAGAGAGAGGGGCTGGCCCTCCATGGGCTTTCGTTAAACTGCTCACTCTaGACACGGCATTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TLSQGPSEREGLALHGLSLNCSL*TRHFSS
Trigger: GGAAGAGAAATGCCGTGTGCAGAGTGAGCAGTTTAA...CGAAAGCCCATGGAGGGCCAGCCCCTCTCTCTCAGAGGGGCCTTGGGAGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AATGAAGCGTGTGGTGGCTTTGCTATGTGTGCTGTGGATGGTGTCTCGGGGCAACGGGCCACACACAGGTaGACCTTCCCCGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: NEACGGFAMCAVDGVSGQRATHR*TFPELL
Trigger: AAGCAGCTCGGGGAAGGTGCACCTGTGTGTGGCCCG...TTGCCCCGAGACACCATCCACAGCACACATAGCAAAGCCACCACACGCTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp CCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGGCTGTGGGGGATGGCACCAAGCCCCTTTaGCCATCCAGAAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PEPIDDVGDPEWRWAVGDGTKPL*PSRSSP
Trigger: AGGAGAGCTTCTGGATGGGCAAAGGGGCTTGGTGCC...ATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTGCCAATTTCACTTCATTCTGCAGCTAGGCACACGCCTGGGCGTGGCCAGGGACCAGGGCAAGGCTCATaGGTGTCTCTTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: VPISLHSAARHTPGRGQGPGQGS*VSLCPP
Trigger: TGGTGGACAAAGAGACACGCATGAGCCTTGCCCTGG...TCCCTGGCCACGCCCAGGCGTGTGCCTAGCTGCAGAATGAAGTGAAATTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TCCTTGCTGTCCCTGAACCCTCGGGAGGAACCTAGTAGGTACATTGCGACAGTTCGCACTGCACGGAGATaGGGTAGGTGCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLLSLNPREEPSRYIATVRTARR*GRCRQL
Trigger: CAGCTGCCTGCACCTACCGCATCTCCGTGCAGTGCG...AACTGTCGCAATGTACCTACTAGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp CCGGACTCCCGCCAGCCAGGGGAAAGGGTAGGTTGGGTGGTGGTTCGTTTCTTCGTACTTGTACCTGGCTaGCTTCACGATGTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: PDSRQPGERVGWVVVRFFVLVPG*LHDVQF
Trigger: GAACTGGACATCGTGAAGGCAGCCAGGTACAAGTAC...GAAGAAACGAACCACCACCCAACCTACCCTTTCCCCTGGCTGGCGGGAGTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TCCTTGCTGTCCCTGAACCCTCGGGAGGAACCTAGTAGGTACATTGCGACAGTTACCTCAGCCACCCTCTaGCCTTTGGCGTACACGCCG +
Preference number: 4 (lower is better)
Translates to: SLLSLNPREEPSRYIATVTSATL*PLAYTP
Trigger: CGGCGTGTACGCCAAAGGGCAGAGGGTGGCTGAGGT...AACTGTCGCAATGTACCTACTAGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCTCAGCTCCACTGCCGTaGCATCTGCCGTGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCSAPLP*HLPWGR
Trigger: TCGCCCCCACGGCAGATGGCACGGCAGTGGAGCTGA...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp TGCCCCGGACTCCCGCCAGCCAGGGGAAAGGGTAGGTTGGGTGGTGGTTCGTTTTATATTGCCCCGCACTaGTTTGCTCTAGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: CPGLPPARGKGRLGGGSFYIAPH*FALERG
Trigger: GCCTCTTTCTAGAGCAAAGCAGTGCGGGGCAATATA...AAACGAACCACCACCCAACCTACCCTTTCCCCTGGCTGGCGGGAGTCCGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp CCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGGCTGTGGGGGATGGTCTGACCCCCGGCTaGTCTCTGTGTGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: PEPIDDVGDPEWRWAVGDGLTPG*SLCGTH
Trigger: ATGAGTACCACACAGAGAGCAGCCGGGGGTCAGACC...ATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGCCCCCAATTGGTACTTGTACCTaGCTGCCTTCACGATGTCCA +
Preference number: 4 (lower is better)
Translates to: ASETRALSGHTIQGKGPPIGTCT*LPSRCP
Trigger: TGGACATCGTGAAGGCAGCCAGGTACAAGTACCAAT...TGGGGGCCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 72 bp GTGTGCACTTTCCCCAGCACAGAGAGACGGTGGGCTTaGAGAGACTTTAGGTGGCCGACCAACGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VCTFPSTERRWA*RDFRWPTNGAS
Trigger: GGAAGCACCGTTGGTCGGCCACCTAAAGTCTCTCAAAGCCCACCGTCTCTCTGTGCTGGGGAAAGTGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GAGCTCTCCTTGCTGTCCCTGAACCCTCGGGAGGAACCTAGTAGGTACATTGCGGCTCCCAGCCCACGATaGCACTTTTGGCAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: ELSLLSLNPREEPSRYIAAPSPR*HFWQAV
Trigger: AACAGCTTGCCAAAAGTGTCATCGTGGGCTGGGAGC...CGCAATGTACCTACTAGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCAGTTTCCCCGGCTCGTaGCGCACTGCACGGAGATGC +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCSFPGS*RTARRC
Trigger: GCATCTCCGTGCAGTGCGTCACGAGCCGGGGAAACT...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGGATGTCCGACAGGTCTaGCCCCCGGCTGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLDVRQV*PPAALC
Trigger: ACAGAGAGCAGCCGGGGGTCAGACCTGTCGGACATC...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GTGGGGCCCAAGTCAGGAAAGCAGCAATGCAAAGATTGCGCCAGATGGCAGAGACCTCATCCTCCTCCATaGTGTCCGACAGGTCTGACC +
Preference number: 4 (lower is better)
Translates to: VGPKSGKQQCKDCARWQRPHPPP*CPTGLT
Trigger: GGTCAGACCTGTCGGACATCATGGAGGAGGATGAGG...TCTCTGCCATCTGGCGCAATCTTTGCATTGCTGCTTTCCTGACTTGGGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp CCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGGCTGTGGGGGATCCAGGGCAAGGCTCATaGGTGTCTCTTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PEPIDDVGDPEWRWAVGDPGQGS*VSLCPP
Trigger: TGGTGGACAAAGAGACACGCATGAGCCTTGCCCTGG...ATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCACGCAGCTGGGACGGTaGCACCACCACATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCTQLGR*HHHILA
Trigger: GGCAAGGATGTGGTGGTGGCACCGTCCCAGCTGCGT...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCACCTCAGCCACCCTCTaGCCTTTGGCGTACACGCCG +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCTSATL*PLAYTP
Trigger: CGGCGTGTACGCCAAAGGGCAGAGGGTGGCTGAGGT...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCTCAGCTCCACTGCCGTaGCATCTGCCGTGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: ESSFGIKASDMDLEVSGGSAPLP*HLPWGR
Trigger: TCGCCCCCACGGCAGATGGCACGGCAGTGGAGCTGA...GCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCCCGGATCAGCTCCACTaGCGTGCCATCTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGPDQLH*RAICRG
Trigger: CCCACGGCAGATGGCACGGCAGTGGAGCTGATCCGG...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp CCTCGTAGGTACATGCGTACCTCCATGAGCTCGGGACAATTGTGCTTTGAGGAGTGGCAACAGTGGGGCTaGTTGCCCAGCTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: PRRYMRTSMSSGQLCFEEWQQWG*LPSSDP
Trigger: AGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTGCCA...CTCCTCAAAGCACAATTGTCCCGAGCTCATGGAGGTACGCATGTACCTACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GAGGGGCTGGCCCTCCATGGGCTTTCGCCGTCTTTGTCTTGGGAGACGGGGTGGCGCGACTCATTGTCCTaGATAAAATCCACAAAGTTG +
Preference number: 4 (lower is better)
Translates to: EGLALHGLSPSLSWETGWRDSLS*IKSTKL
Trigger: CAACTTTGTGGATTTTATCCAGGACAATGAGTCGCG...CCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GAGCTCTCCTTGCTGTCCCTGAACCCTCGGGAGGAACCTAGTAGGTACATTGCGGGCTGTAGTTACTGTTaGTCGGCAGCCACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ELSLLSLNPREEPSRYIAGCSYC*SAATRA
Trigger: AGCTCTCGTGGCTGCCGACCAACAGTAACTACAGCC...CGCAATGTACCTACTAGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp CCGGACTCCCGCCAGCCAGGGGAAAGGGTAGGTTGGGTGGTGGTTCGTTTCTTCCTGAGGTTGAAGAATTaGTACTTGTACCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PDSRQPGERVGWVVVRFFLRLKN*YLYLAA
Trigger: GGCAGCCAGGTACAAGTACCAATTCTTCAACCTCAG...GAAGAAACGAACCACCACCCAACCTACCCTTTCCCCTGGCTGGCGGGAGTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp CAGCTGGGTATTCCACCAGCTTTGGCATGCCCAGAGCCAAGGCCACCCCTTGGGCTGAGGTTGAAGAATTaGTACTTGTACCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QLGIPPALACPEPRPPLGLRLKN*YLYLAA
Trigger: GGCAGCCAGGTACAAGTACCAATTCTTCAACCTCAG...CCCAAGGGGTGGCCTTGGCTCTGGGCATGCCAAAGCTGGTGGAATACCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TGTGCACCTACCTACTGTGCAGGCCAGGGGAAGACCCTGGGGTCAGGCAGACTGCTCATCATAGAAGTCTaGAGAAAGATGGTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: CAPTYCAGQGKTLGSGRLLIIEV*RKMVSP
Trigger: GGGCGAGACCATCTTTCTCCAGACTTCTATGATGAG...CAGTCTGCCTGACCCCAGGGTCTTCCCCTGGCCTGCACAGTAGGTAGGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp CCTCGTAGGTACATGCGTACCTCCATGAGCTCGGGACAATTGTGCTTTGAGGAGGCTGGCTTACCCTTTTaGCCTTGGAGCGCATGGGCG +
Preference number: 4 (lower is better)
Translates to: PRRYMRTSMSSGQLCFEEAGLPF*PWSAWA
Trigger: CGCCCATGCGCTCCAAGGCCAAAAGGGTAAGCCAGC...CTCCTCAAAGCACAATTGTCCCGAGCTCATGGAGGTACGCATGTACCTACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
3UTR CAA 72 bp CAGGCTTCTGGTTCAGTAATCTCCCCAGAGCAAAACTaGGCGAGTGAGACCAGGGCACTCAGCGGGCACACA +
Preference number: 4 (lower is better)
Translates to: QASGSVISPEQN*ASETRALSGHT
Trigger: TGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGTTTTGCTCTGGGGAGATTACTGAACCAGAAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTAGTTTCCCCGGCTCGTaGCGCACTGCACGGAGATGC +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSSFPGS*RTARRC
Trigger: GCATCTCCGTGCAGTGCGTCACGAGCCGGGGAAACT...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCAGTTTCCCCGGCTCGTaGCGCACTGCACGGAGATGC +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGSFPGS*RTARRC
Trigger: GCATCTCCGTGCAGTGCGTCACGAGCCGGGGAAACT...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCGATGTCCGACAGGTCTaGCCCCCGGCTGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGDVRQV*PPAALC
Trigger: ACAGAGAGCAGCCGGGGGTCAGACCTGTCGGACATC...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCATCTTGAGGGCGTTGTaGGAGGTACCGCTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCILRAL*EVPLGR
Trigger: TCGGCCCAGCGGTACCTCTCACAACGCCCTCAAGAT...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGATCTTGAGGGCGTTGTaGGAGGTACCGCTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLILRAL*EVPLGR
Trigger: TCGGCCCAGCGGTACCTCTCACAACGCCCTCAAGAT...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp CCTCGTAGGTACATGCGTACCTCCATGAGCTCGGGACAATTGTGCTTTGAGGAGAGGAAGGCCAGGGCTTaGTCATGCTCCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: PRRYMRTSMSSGQLCFEERKARA*SCSNSS
Trigger: GCTGGAGTTGGAGCATGAGCAAGCCCTGGCCTTCCT...CTCCTCAAAGCACAATTGTCCCGAGCTCATGGAGGTACGCATGTACCTACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGGGGCCACTGAGCTGCTaGCCAGCAGGTCAATACTCC +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLGPLSC*PAGQYS
Trigger: GGAGTATTGACCTGCTGGGCAGCAGCTCAGTGGCCC...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTCGGGCCACACACAGGTaGACCTTCCCCGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSRATHR*TFPELL
Trigger: AAGCAGCTCGGGGAAGGTGCACCTGTGTGTGGCCCG...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTCGCACTGCACGGAGATaGGGTAGGTGCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSRTARR*GRCRQL
Trigger: CAGCTGCCTGCACCTACCGCATCTCCGTGCAGTGCG...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCCGCACTGCACGGAGATaGGGTAGGTGCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGRTARR*GRCRQL
Trigger: CAGCTGCCTGCACCTACCGCATCTCCGTGCAGTGCG...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACTGCTCCAGCGGCAGCTaGCAGGGCATCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYCSSGS*QGIWCG
Trigger: GCCACACCAGATGCCCTGGCAGCTGCCGCTGGAGCA...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTGGGGCTGGAGGTCCTaGAGGCAGCGTGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGWGWRS*RQRGEL
Trigger: GAGTTCTCCACGCTGCCTGCAGGACCTCCAGCCCCA...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTTGGGGCTGGAGGTCCTaGAGGCAGCGTGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSWGWRS*RQRGEL
Trigger: GAGTTCTCCACGCTGCCTGCAGGACCTCCAGCCCCA...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACTCAGCTCCACTGCCGTaGCATCTGCCGTGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYSAPLP*HLPWGR
Trigger: TCGCCCCCACGGCAGATGGCACGGCAGTGGAGCTGA...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCCGGATCAGCTCCACTaGCGTGCCATCTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDPDQLH*RAICRG
Trigger: CCCACGGCAGATGGCACGGCAGTGGAGCTGATCCGG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GAAGCCACTGTGTCAAGTGAGGATGAAGACCAGGAATGCACAACACATGCGAAGCTCAGCCACCCTCTGTaGAGCTTCACGGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: EATVSSEDEDQECTTHAKLSHPL*SFTGHG
Trigger: GCCATGGCCCGTGAAGCTGCACAGAGGGTGGCTGAG...CTTCGCATGTGTTGTGCATTCCTGGTCTTCATCCTCACTTGACACAGTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCCTCAGCCACCCTCTGTaGAGCTTCACGGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGLSHPL*SFTGHG
Trigger: GCCATGGCCCGTGAAGCTGCACAGAGGGTGGCTGAG...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp CAGCTGGGTATTCCACCAGCTTTGGCATGCCCAGAGCCAAGGCCACCCCTTGGGCTTTGTGGATGGAGGTaGCTAGTCCATTCATGTACT +
Preference number: 4 (lower is better)
Translates to: QLGIPPALACPEPRPPLGLCGWR*LVHSCT
Trigger: AGTACATGAATGGACTAGCCACCTCCATCCACAAAG...CCCAAGGGGTGGCCTTGGCTCTGGGCATGCCAAAGCTGGTGGAATACCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGTGGTTGAGAAAGTTCTaGTCCTGCTCACTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: NLASETRALSGHTIQGKGWLRKF*SCSLPR
Trigger: TCTGGGGAGTGAGCAGGACCAGAACTTTCTCAACCA...CCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGTTGTCCACACGCAGCTaGGACGGTGCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLLSTRS*DGATTT
Trigger: TGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGACAA...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCTTGTCCACACGCAGCTaGGACGGTGCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCLSTRS*DGATTT
Trigger: TGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGACAA...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCCACCCTCTGCCCTTTaGCGTACACGCCGTATCCTG +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLPPSAL*RTRRIL
Trigger: CAGGATACGGCGTGTACGCCAAAGGGCAGAGGGTGG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACGGAGCAGTCCTCGGGTaGGGGGCTGGAGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDGAVLG*GAGGTR
Trigger: CCTGGTGCCTCCAGCCCCCCACCCGAGGACTGCTCC...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCGGTGGTTCCAACATGTaGCCATGTGCAGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCGGSNM*PCAGPG
Trigger: ACCGGGCCCTGCACATGGCCACATGTTGGAACCACC...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp TGGCTTGCGTTGAAAGACCCAAGACAGGCATCTGAAAGTGTAGGGCCTGGGCCACTCTTCAGCAGCGTCTaGGTTTGGGGACATGGTCAG +
Preference number: 4 (lower is better)
Translates to: WLALKDPRQASESVGPGPLFSSV*VWGHGQ
Trigger: CTGACCATGTCCCCAAACCCAGACGCTGCTGAAGAG...TGGCCCAGGCCCTACACTTTCAGATGCCTGTCTTGGGTCTTTCAACGCAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp CCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGGCTGTGGGGGATGGAGCATCAGAAAGGTaGACCTCCACATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: PEPIDDVGDPEWRWAVGDGASER*TSTSSG
Trigger: GCCTGATGATGTGGAGGTCCACCTTTCTGATGCTCC...ATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 72 bp CTCCTTCTGGTCTGGCTAATGAAGCGTGTGGTGGCTTaGCTATGTGTGCTGTGGATGGTGTCTCGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LLLVWLMKRVVA*LCVLWMVSRGK
Trigger: CTTGCCCCGAGACACCATCCACAGCACACATAGCAAAGCCACCACACGCTTCATTAGCCAGACCAGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp CCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCTCAGGGTACTTTCCCGCCGTaGGAGGCAGCTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PRLELKPVTWIWKCPEAQGTFPP*EAAQLL
Trigger: CAGAAGCTGAGCTGCCTCTCACGGCGGGAAAGTACC...CTGAGCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCACTGCCGTGGGGGCGATaGCCTCAGCCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPLPWGR*PQPPSA
Trigger: GGCAGAGGGTGGCTGAGGTCATCGCCCCCACGGCAG...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACGATGTCCGACAGGTCTaGCCCCCGGCTGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYDVRQV*PPAALC
Trigger: ACAGAGAGCAGCCGGGGGTCAGACCTGTCGGACATC...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCCTCATCCTCCTCCATaGTGTCCGACAGGTCTGACC +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCPHPPP*CPTGLT
Trigger: GGTCAGACCTGTCGGACATCATGGAGGAGGATGAGG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCAGGAAGGCCAGGGCTTaGTCATGCTCCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCRKARA*SCSNSS
Trigger: GCTGGAGTTGGAGCATGAGCAAGCCCTGGCCTTCCT...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTGGGCCACTGAGCTGCTaGCCAGCAGGTCAATACTCC +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSGPLSC*PAGQYS
Trigger: GGAGTATTGACCTGCTGGGCAGCAGCTCAGTGGCCC...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GAAGCCACTGTGTCAAGTGAGGATGAAGACCAGGAATGCACAACACATGCGAAGGGGCCACTGAGCTGCTaGCCAGCAGGTCAATACTCC +
Preference number: 4 (lower is better)
Translates to: EATVSSEDEDQECTTHAKGPLSC*PAGQYS
Trigger: GGAGTATTGACCTGCTGGGCAGCAGCTCAGTGGCCC...CTTCGCATGTGTTGTGCATTCCTGGTCTTCATCCTCACTTGACACAGTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCGGGCCACACACAGGTaGACCTTCCCCGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDRATHR*TFPELL
Trigger: AAGCAGCTCGGGGAAGGTGCACCTGTGTGTGGCCCG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGTGCCCACCAGCAGAGTaGACTGCAGCTCGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLCPPAE*TAARLS
Trigger: ACTCAGACGAGCTGCAGTGCACTCTGCTGGTGGGCA...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCCACCACCACATCCTTaGCCACCAGCAGAGTGCACT +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLPPPHP*PPAECT
Trigger: AGTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACACGCAGCTGGGACGGTaGCACCACCACATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDTQLGR*HHHILA
Trigger: GGCAAGGATGTGGTGGTGGCACCGTCCCAGCTGCGT...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp TGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAACGCAGCTGGGACGGTaGCACCACCACATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: WESSFGIKASDMDLEVSGTQLGR*HHHILA
Trigger: GGCAAGGATGTGGTGGTGGCACCGTCCCAGCTGCGT...TCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACTGGGGCTGGAGGTCCTaGAGGCAGCGTGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDWGWRS*RQRGEL
Trigger: GAGTTCTCCACGCTGCCTGCAGGACCTCCAGCCCCA...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCCCAGTGGGAGTCAGTaGAGGGGGCTTCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDPSGSQ*RGLPGD
Trigger: GTCTCCTGGAAGCCCCCTGCACTGACTCCCACTGGG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACACCTCAGCCACCCTCTaGCCTTTGGCGTACACGCCG +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYTSATL*PLAYTP
Trigger: CGGCGTGTACGCCAAAGGGCAGAGGGTGGCTGAGGT...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCTCAGCCACCCTCTGTaGAGCTTCACGGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDLSHPL*SFTGHG
Trigger: GCCATGGCCCGTGAAGCTGCACAGAGGGTGGCTGAG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGGGTCTGACCCCCGGCTaGTCTCTGTGTGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLGLTPG*SLCGTH
Trigger: ATGAGTACCACACAGAGAGCAGCCGGGGGTCAGACC...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTGGTCTGACCCCCGGCTaGTCTCTGTGTGGTAAGTGG +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSGLTPG*SLCGKW
Trigger: CCACTTACCACACAGAGAGCAGCCGGGGGTCAGACC...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196085.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGGCCTGCTGCAGTAGCTaGATCTCCTGCTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLACCSS*ISCCLA
Trigger: TGCCAAGCAGCAGGAGATCCAGCTACTGCAGCAGGC...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCGCCTGCTGCAGTAGCTaGATCTCCTGCTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCACCSS*ISCCLA
Trigger: TGCCAAGCAGCAGGAGATCCAGCTACTGCAGCAGGC...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGGGCATCTGGTGTGGCTaGGCCAAGACCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLGIWCG*AKTFTL
Trigger: CAAGGTGAAGGTCTTGGCCCAGCCACACCAGATGCC...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGAGTGACATCTTGTGGTaGGGCTGGAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLSDILW*GWRSCR
Trigger: CCTGCAGGACCTCCAGCCCCACCACAAGATGTCACT...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCAGTGACATCTTGTGGTaGGGCTGGAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCSDILW*GWRSCR
Trigger: CCTGCAGGACCTCCAGCCCCACCACAAGATGTCACT...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCGACAGTGACATCTTGTaGTGGGGCTGGAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCDSDIL*WGWRSC
Trigger: GCAGGACCTCCAGCCCCACCACAAGATGTCACTGTC...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGAGCAGCGTCTGGGTTTaGGGACATGGTCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLSSVWV*GHGQWV
Trigger: GACCCACTGACCATGTCCCCAAACCCAGACGCTGCT...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
3UTR CAA 72 bp CGTAGGTACATGCGTACCTCCATGAGCTCGGGACAATaGTGCTTTGAGGAGAGGGAACACCTGCTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: RRYMRTSMSSGQ*CFEEREHLLLR
Trigger: CCTTAGGAGCAGGTGTTCCCTCTCCTCAAAGCACAATTGTCCCGAGCTCATGGAGGTACGCATGTACCTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 72 bp GGGGTCGATAAGGCCCTGCCATGGTGGAGTAAGCCCTaGGGTCAGTTAGAGTCCTACAGAAACTTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GVDKALPWWSKP*GQLESYRNFGD
Trigger: ATCCCCAAAGTTTCTGTAGGACTCTAACTGACCCAAGGGCTTACTCCACCATGGCAGGGCCTTATCGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACGGTACTTTCCCGCCGTaGGAGGCAGCTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYGTFPP*EAAQLL
Trigger: CAGAAGCTGAGCTGCCTCTCACGGCGGGAAAGTACC...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGTACTTTCCCGCCGTaGGAGGCAGCTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDGTFPP*EAAQLL
Trigger: CAGAAGCTGAGCTGCCTCTCACGGCGGGAAAGTACC...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCCAGCTCTGACCCTTTaGGGAAGTCATCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLPALTL*GSHPLR
Trigger: CCTCAGTGGATGACTTCCTCAAAGGGTCAGAGCTGG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCTTGCCCAGCTCTaGCCCTTTGAGGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCLLAQL*PFEEVI
Trigger: GATGACTTCCTCAAAGGGTCAGAGCTGGGCAAGCAG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp ACAGTTTACAGTGGACAGGAATTACAAAGTTGTGGCCATCCCATCAGCCAGCGTATCTTGAGGGCGTTGTaGGAGGTACCGCTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: TVYSGQELQSCGHPISQRILRAL*EVPLGR
Trigger: TCGGCCCAGCGGTACCTCTCACAACGCCCTCAAGAT...ACGCTGGCTGATGGGATGGCCACAACTTTGTAATTCCTGTCCACTGTAAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp TGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGATCTCCTTGCTGTCCCTaGACCCTCGGGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: WESSFGIKASDMDLEVSGSPCCP*TLGRNP
Trigger: AGGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGAGA...TCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239036.2
CDS-3UTR GCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACGGGCCACTGAGCTGCTaGCCAGCAGGTCAATACTCC +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYGPLSC*PAGQYS
Trigger: GGAGTATTGACCTGCTGGGCAGCAGCTCAGTGGCCC...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCGGCACCAAGCCCCTTTaGCCATCCAGAAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGGTKPL*PSRSSP
Trigger: AGGAGAGCTTCTGGATGGGCAAAGGGGCTTGGTGCC...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCCAGGGCAAGGCTCATaGGTGTCTCTTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLPGQGS*VSLCPP
Trigger: TGGTGGACAAAGAGACACGCATGAGCCTTGCCCTGG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCCAGGGCAAGGCTCATaGGTGTCTCTTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCPGQGS*VSLCPP
Trigger: TGGTGGACAAAGAGACACGCATGAGCCTTGCCCTGG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTGCCCACCAGCAGAGTaGACTGCAGCTCGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGCPPAE*TAARLS
Trigger: ACTCAGACGAGCTGCAGTGCACTCTGCTGGTGGGCA...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTCCACCACCACATCCTTaGCCACCAGCAGAGTGCACT +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSPPPHP*PPAECT
Trigger: AGTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGG...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGTCCTTCTTTTCTCTCTaGTCCAGCGGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLSFFSL*SSGSCQ
Trigger: CTGGCAGCTGCCGCTGGAGCAGAGAGAAAAGAAGGA...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GTGCCAATTTCACTTCATTCTGCAGCTAGGCACACGCCTGGGCGTGGCCAGGGAGTATCCTGTGACATTTaGTCCATTGGACAACCCAGT +
Preference number: 4 (lower is better)
Translates to: VPISLHSAARHTPGRGQGVSCDI*SIGQPS
Trigger: ACTGGGTTGTCCAATGGAGCAAATGTCACAGGATAC...TCCCTGGCCACGCCCAGGCGTGTGCCTAGCTGCAGAATGAAGTGAAATTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACTGGCAACAGTGGGGCTaGTTGCCCAGCTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDWQQWG*LPSSDP
Trigger: AGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTGCCA...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACTGGCAACAGTGGGGCTaGTTGCCCAGCTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYWQQWG*LPSSDP
Trigger: AGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTGCCA...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp AATGAAGCGTGTGGTGGCTTTGCTATGTGTGCTGTGGATGGTGTCTCGGGGCAACTTCTGGGTTCTCATTaGGCCCATCGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: NEACGGFAMCAVDGVSGQLLGSH*AHRRGC
Trigger: ACAACCCCTTCGATGGGCCCAATGAGAACCCAGAAG...TTGCCCCGAGACACCATCCACAGCACACATAGCAAAGCCACCACACGCTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACCCACCCTCTGCCCTTTaGCGTACACGCCGTATCCTG +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYPPSAL*RTRRIL
Trigger: CAGGATACGGCGTGTACGCCAAAGGGCAGAGGGTGG...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGTGGTTCCAACATGTaGCCATGTGCAGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDGGSNM*PCAGPG
Trigger: ACCGGGCCCTGCACATGGCCACATGTTGGAACCACC...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTCTCCATGGCAACAGTaGGGCTGCTTGCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGSPWQQ*GCLPSS
Trigger: AGAGCTGGGCAAGCAGCCCCACTGTTGCCATGGAGA...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCTCTTCAGCAGCGTCTaGGTTTGGGGACATGGTCAG +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLLFSSV*VWGHGQ
Trigger: CTGACCATGTCCCCAAACCCAGACGCTGCTGAAGAG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp AACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGTCCTCATCATCCGCATaGATCTCAGAGACCATGTTA +
Preference number: 4 (lower is better)
Translates to: NLASETRALSGHTIQGKGSSSSA*ISETML
Trigger: TAACATGGTCTCTGAGATCCATGCGGATGATGAGGA...CCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TCCTTGCTGTCCCTGAACCCTCGGGAGGAACCTAGTAGGTACATTGCGACAGTTGGAGCATCAGAAAGGTaGACCTCCACATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: SLLSLNPREEPSRYIATVGASER*TSTSSG
Trigger: GCCTGATGATGTGGAGGTCCACCTTTCTGATGCTCC...AACTGTCGCAATGTACCTACTAGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGCCAGTGGGGCCCTCGTaGCCTTTGTGGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGEPVGPS*PLWMEV
Trigger: CACCTCCATCCACAAAGGTCACGAGGGCCCCACTGG...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTGCTCCCAGCCCACGATaGCACTTTTGGCAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSAPSPR*HFWQAV
Trigger: AACAGCTTGCCAAAAGTGTCATCGTGGGCTGGGAGC...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp CCACTGTGCAGTTATAAGGCCAGAACATCAAGGCGAGTTAAACTAGGAATCTCAAGTTTCCCCGGCTCGTaGCGCACTGCACGGAGATGC +
Preference number: 4 (lower is better)
Translates to: PLCSYKARTSRRVKLGISSFPGS*RTARRC
Trigger: GCATCTCCGTGCAGTGCGTCACGAGCCGGGGAAACT...TGAGATTCCTAGTTTAACTCGCCTTGATGTTCTGGCCTTATAACTGCACAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTATGTGCAGGGCCCGGTaGCCGGCTCTGCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFMCRAR*PALLPG
Trigger: TCCTGGGAGCAGAGCCGGTCACCGGGCCCTGCACAT...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTCCAGCTCTGACCCTTTaGGGAAGTCATCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSPALTL*GSHPLR
Trigger: CCTCAGTGGATGACTTCCTCAAAGGGTCAGAGCTGG...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTCTGCTTGCCCAGCTCTaGCCCTTTGAGGAAGTCATC +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSLLAQL*PFEEVI
Trigger: GATGACTTCCTCAAAGGGTCAGAGCTGGGCAAGCAG...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACCCTCATCCTCCTCCATaGTGTCCGACAGGTCTGACC +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYPHPPP*CPTGLT
Trigger: GGTCAGACCTGTCGGACATCATGGAGGAGGATGAGG...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCCTTGCCTCAGCAGCTaGTCCATCATCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCPCLSS*SIISSS
Trigger: TGATGAGGAGATGATGGATCAGCTGCTGAGGCAAGG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCCTTGCCTCAGCAGCTaGTCCATCATCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLPCLSS*SIISSS
Trigger: TGATGAGGAGATGATGGATCAGCTGCTGAGGCAAGG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp TTGATTCAGGAACACTGTGTGCCAATTTCACTTCATTCTGCAGCTAGGCACACGGGGCCACTGAGCTGCTaGCCAGCAGGTCAATACTCC +
Preference number: 4 (lower is better)
Translates to: LIQEHCVPISLHSAARHTGPLSC*PAGQYS
Trigger: GGAGTATTGACCTGCTGGGCAGCAGCTCAGTGGCCC...CGTGTGCCTAGCTGCAGAATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGCGGGCCACACACAGGTaGACCTTCCCCGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGERATHR*TFPELL
Trigger: AAGCAGCTCGGGGAAGGTGCACCTGTGTGTGGCCCG...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACTGCCCACCAGCAGAGTaGACTGCAGCTCGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYCPPAE*TAARLS
Trigger: ACTCAGACGAGCTGCAGTGCACTCTGCTGGTGGGCA...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACGCAGCTGGGACGGTaGCACCACCACATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDTQLGR*HHHILA
Trigger: GGCAAGGATGTGGTGGTGGCACCGTCCCAGCTGCGT...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCATGCTCCAGCGGCAGCTaGCAGGGCATCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPCSSGS*QGIWCG
Trigger: GCCACACCAGATGCCCTGGCAGCTGCCGCTGGAGCA...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTCCTTCTTTTCTCTCTaGTCCAGCGGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGSFFSL*SSGSCQ
Trigger: CTGGCAGCTGCCGCTGGAGCAGAGAGAAAAGAAGGA...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GGGTCAAGGTTGGGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGTCCTTCTTTTCTCTCTaGTCCAGCGGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GSRLGFGSPRLELKPVTWSFFSL*SSGSCQ
Trigger: CTGGCAGCTGCCGCTGGAGCAGAGAGAAAAGAAGGA...CCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCTTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGATCAGCTCCACTGCCGTaGCATCTGCCGTGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGSAPLP*HLPWGR
Trigger: TCGCCCCCACGGCAGATGGCACGGCAGTGGAGCTGA...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCACCGGATCAGCTCCACTaGCGTGCCATCTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPPDQLH*RAICRG
Trigger: CCCACGGCAGATGGCACGGCAGTGGAGCTGATCCGG...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCTGCCCCGCACTGCTTTaGTCTAGAAAGAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCCPALL*SRKRLL
Trigger: AAGGAGCCTCTTTCTAGAGCAAAGCAGTGCGGGGCA...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp TGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCATCTGGTGTGGCTaGGCCAAGACCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: WESSFGIKASDMDLEVSGGIWCG*AKTFTL
Trigger: CAAGGTGAAGGTCTTGGCCCAGCCACACCAGATGCC...TCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACGGCATCTGGTGTGGCTaGGCCAAGACCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYGIWCG*AKTFTL
Trigger: CAAGGTGAAGGTCTTGGCCCAGCCACACCAGATGCC...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGACAGTGACATCTTGTaGTGGGGCTGGAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDDSDIL*WGWRSC
Trigger: GCAGGACCTCCAGCCCCACCACAAGATGTCACTGTC...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACTCTCCATGGCAACAGTaGGGCTGCTTGCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYSPWQQ*GCLPSS
Trigger: AGAGCTGGGCAAGCAGCCCCACTGTTGCCATGGAGA...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCGGCTGCTCTCTGTGTaGTACTCATCTCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLRLLSV*YSSPWQ
Trigger: TTGCCATGGAGATGAGTACCACACAGAGAGCAGCCG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACAGCAGCGTCTGGGTTTaGGGACATGGTCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYSSVWV*GHGQWV
Trigger: GACCCACTGACCATGTCCCCAAACCCAGACGCTGCT...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCCTCTTCAGCAGCGTCTaGGTTTGGGGACATGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGLFSSV*VWGHGQ
Trigger: CTGACCATGTCCCCAAACCCAGACGCTGCTGAAGAG...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCGGAGCATCAGAAAGGTaGACCTCCACATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCGASER*TSTSSG
Trigger: GCCTGATGATGTGGAGGTCCACCTTTCTGATGCTCC...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGGGAGCATCAGAAAGGTaGACCTCCACATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLGASER*TSTSSG
Trigger: GCCTGATGATGTGGAGGTCCACCTTTCTGATGCTCC...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTAGTCCATTCATGTACTaGGGGAAAGGCTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSSPFMY*GKGLPG
Trigger: CCCTGGCAAGCCTTTCCCTCAGTACATGAATGGACT...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp CCACTGTGCAGTTATAAGGCCAGAACATCAAGGCGAGTTAAACTAGGAATCTCAGGTACTTTCCCGCCGTaGGAGGCAGCTCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PLCSYKARTSRRVKLGISGTFPP*EAAQLL
Trigger: CAGAAGCTGAGCTGCCTCTCACGGCGGGAAAGTACC...TGAGATTCCTAGTTTAACTCGCCTTGATGTTCTGGCCTTATAACTGCACAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACGCTCCCAGCCCACGATaGCACTTTTGGCAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYAPSPR*HFWQAV
Trigger: AACAGCTTGCCAAAAGTGTCATCGTGGGCTGGGAGC...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCACACGCCGTATCCTGTaGCATTTGCTCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCTRRIL*HLLHWT
Trigger: TGTCCAATGGAGCAAATGTCACAGGATACGGCGTGT...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACACTGAGGGAAAGGCTTaGCAGGGGCCAAGGGAACAT +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDTEGKA*QGPREH
Trigger: ATGTTCCCTTGGCCCCTGGCAAGCCTTTCCCTCAGT...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGTCTCGGACTCAAATCTaGATCTTGGGCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLSRTQI*ILGCWI
Trigger: GATCCAGCAGCCCAAGATGCAGATTTGAGTCCGAGA...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACGCACTGCACGGAGATaGGGTAGGTGCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGRTARR*GRCRQL
Trigger: CAGCTGCCTGCACCTACCGCATCTCCGTGCAGTGCG...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TTGCTATGTGTGCTGTGGATGGTGTCTCGGGGCAAGGCATTTCAACAAATAATGTGCCCACCAGCAGAGTaGACTGCAGCTCGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LLCVLWMVSRGKAFQQIMCPPAE*TAARLS
Trigger: ACTCAGACGAGCTGCAGTGCACTCTGCTGGTGGGCA...CATTATTTGTTGAAATGCCTTGCCCCGAGACACCATCCACAGCACACATAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTTGCTCCAGCGGCAGCTaGCAGGGCATCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFCSSGS*QGIWCG
Trigger: GCCACACCAGATGCCCTGGCAGCTGCCGCTGGAGCA...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCACCCAGTGGGAGTCAGTaGAGGGGGCTTCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPPSGSQ*RGLPGD
Trigger: GTCTCCTGGAAGCCCCCTGCACTGACTCCCACTGGG...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGAACCTCAGCCACCCTCTaGCCTTTGGCGTACACGCCG +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGTSATL*PLAYTP
Trigger: CGGCGTGTACGCCAAAGGGCAGAGGGTGGCTGAGGT...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCAACCTCAGCCACCCTCTaGCCTTTGGCGTACACGCCG +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPTSATL*PLAYTP
Trigger: CGGCGTGTACGCCAAAGGGCAGAGGGTGGCTGAGGT...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCGTGACCTTTGTGGATaGAGGTGGCTAGTCCATTCA +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCRDLCG*RWLVHS
Trigger: TGAATGGACTAGCCACCTCCATCCACAAAGGTCACG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTCAAATCTGCATCTTaGGCTGCTGGATCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCLKSAS*AAGSQE
Trigger: CTCTTGCGATCCAGCAGCCCAAGATGCAGATTTGAG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCGAGTCCACTTGAGTTaGGGAGTGAAGGTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCRVHLS*GVKVKD
Trigger: ATCCTTCACCTTCACTCCCCAACTCAAGTGGACTCG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCGAGTCCACTTGAGTTaGGGAGTGAAGGTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLRVHLS*GVKVKD
Trigger: ATCCTTCACCTTCACTCCCCAACTCAAGTGGACTCG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACGGCTGTAGTTACTGTTaGTCGGCAGCCACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYGCSYC*SAATRA
Trigger: AGCTCTCGTGGCTGCCGACCAACAGTAACTACAGCC...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp TTGATTCAGGAACACTGTGTGCCAATTTCACTTCATTCTGCAGCTAGGCACACGAGTGACATCTTGTGGTaGGGCTGGAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LIQEHCVPISLHSAARHTSDILW*GWRSCR
Trigger: CCTGCAGGACCTCCAGCCCCACCACAAGATGTCACT...CGTGTGCCTAGCTGCAGAATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGGGTGGTTCCAACATGTaGCCATGTGCAGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGEGGSNM*PCAGPG
Trigger: ACCGGGCCCTGCACATGGCCACATGTTGGAACCACC...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp CCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCTCAGCGGCTGCTCTCTGTGTaGTACTCATCTCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: PRLELKPVTWIWKCPEAQRLLSV*YSSPWQ
Trigger: TTGCCATGGAGATGAGTACCACACAGAGAGCAGCCG...CTGAGCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCTCTTCAGCAGCGTCTaGGTTTGGGGACATGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDLFSSV*VWGHGQ
Trigger: CTGACCATGTCCCCAAACCCAGACGCTGCTGAAGAG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp TTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCATGGGCTGTGGGGGATaGAGCTCTCCTTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: FWESSFGIKASDMDLEVSMGCGG*SSPCCP
Trigger: GGGACAGCAAGGAGAGCTCCATCCCCCACAGCCCAT...GGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000239036.2
CDS-3UTR CCA 90 bp AGGTTGGGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGGTAGGTGACCCCGAATaGAGATGGGCTGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: RLGFGSPRLELKPVTWIWVGDPE*RWAVGD
Trigger: ATCCCCCACAGCCCATCTCCATTCGGGGTCACCTAC...CCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000239036.2
3UTR CAA 72 bp GGTGGCCGACCAACGGTGCTTCCAAGGGGGTGGAATTaGATTCAGGAACACTGTGTGCCAATTTCACTTCAT +
Preference number: 4 (lower is better)
Translates to: GGRPTVLPRGWN*IQEHCVPISLH
Trigger: ATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAAATTCCACCCCCTTGGAAGCACCGTTGGTCGGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACAGTCCATTCATGTACTaGGGGAAAGGCTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYSPFMY*GKGLPG
Trigger: CCCTGGCAAGCCTTTCCCTCAGTACATGAATGGACT...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp CCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCTCAGACACGCCGTATCCTGTaGCATTTGCTCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: PRLELKPVTWIWKCPEAQTRRIL*HLLHWT
Trigger: TGTCCAATGGAGCAAATGTCACAGGATACGGCGTGT...CTGAGCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTGATGTCCGACAGGTCTaGCCCCCGGCTGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFDVRQV*PPAALC
Trigger: ACAGAGAGCAGCCGGGGGTCAGACCTGTCGGACATC...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGAATCTTGAGGGCGTTGTaGGAGGTACCGCTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGILRAL*EVPLGR
Trigger: TCGGCCCAGCGGTACCTCTCACAACGCCCTCAAGAT...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACCCTTGCCTCAGCAGCTaGTCCATCATCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYPCLSS*SIISSS
Trigger: TGATGAGGAGATGATGGATCAGCTGCTGAGGCAAGG...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGAGGAAGGCCAGGGCTTaGTCATGCTCCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGERKARA*SCSNSS
Trigger: GCTGGAGTTGGAGCATGAGCAAGCCCTGGCCTTCCT...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGACCTTGGACTGCATaGAGTCCAGGGTGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDGPWTA*SPGCSL
Trigger: TAGAGAACACCCTGGACTGCATGCAGTCCAAGGTCC...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
CDS-3UTR GCA 90 bp AGGTTGGGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGACTGAGGGAAAGGCTTaGCAGGGGCCAAGGGAACAT +
Preference number: 4 (lower is better)
Translates to: RLGFGSPRLELKPVTWIWTEGKA*QGPREH
Trigger: ATGTTCCCTTGGCCCCTGGCAAGCCTTTCCCTCAGT...CCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACATCTGCATCTTGGGCTaGTGGATCGCAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDICILG*WIARGR
Trigger: CCTTCCTCTTGCGATCCAGCAGCCCAAGATGCAGAT...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATCTGCATCTTGGGCTaGTGGATCGCAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYICILG*WIARGR
Trigger: CCTTCCTCTTGCGATCCAGCAGCCCAAGATGCAGAT...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp TCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCTCAGGGTCTCGGACTCAAATCTaGATCTTGGGCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: SFGIKASDMDLEVSGGSGSRTQI*ILGCWI
Trigger: GATCCAGCAGCCCAAGATGCAGATTTGAGTCCGAGA...CCCTGAGCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACCCACCACCACATCCTTaGCCACCAGCAGAGTGCACT +
Preference number: 4 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDPPPHP*PPAECT
Trigger: AGTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGG...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTACGCAGCTGGGACGGTaGCACCACCACATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFTQLGR*HHHILA
Trigger: GGCAAGGATGTGGTGGTGGCACCGTCCCAGCTGCGT...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTTGGGGCTGGAGGTCCTaGAGGCAGCGTGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFWGWRS*RQRGEL
Trigger: GAGTTCTCCACGCTGCCTGCAGGACCTCCAGCCCCA...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTCTCAGCCACCCTCTGTaGAGCTTCACGGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFLSHPL*SFTGHG
Trigger: GCCATGGCCCGTGAAGCTGCACAGAGGGTGGCTGAG...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGTTTTCTCTAACCTGTTaGTCTCAGCCACCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLFSLTC*SQPPSV
Trigger: CACAGAGGGTGGCTGAGAGCAACAGGTTAGAGAAAA...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp TGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGATGCCCCGCACTGCTTTaGTCTAGAAAGAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: WESSFGIKASDMDLEVSGCPALL*SRKRLL
Trigger: AAGGAGCCTCTTTCTAGAGCAAAGCAGTGCGGGGCA...TCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCTATATTGCCCCGCACTaGTTTGCTCTAGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCYIAPH*FALERG
Trigger: GCCTCTTTCTAGAGCAAAGCAGTGCGGGGCAATATA...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp CCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCTCAGCGTGACCTTTGTGGATaGAGGTGGCTAGTCCATTCA +
Preference number: 4 (lower is better)
Translates to: PRLELKPVTWIWKCPEAQRDLCG*RWLVHS
Trigger: TGAATGGACTAGCCACCTCCATCCACAAAGGTCACG...CTGAGCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACCTTCTGGGTTCTCATTaGGCCCATCGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYLLGSH*AHRRGC
Trigger: ACAACCCCTTCGATGGGCCCAATGAGAACCCAGAAG...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTGGTTGAGAAAGTTCTaGTCCTGCTCACTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGWLRKF*SCSLPR
Trigger: TCTGGGGAGTGAGCAGGACCAGAACTTTCTCAACCA...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGGACAGTGACATCTTGTaGTGGGGCTGGAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGEDSDIL*WGWRSC
Trigger: GCAGGACCTCCAGCCCCACCACAAGATGTCACTGTC...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCACCACCCTCTGCCCTTTaGCGTACACGCCGTATCCTG +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPPPSAL*RTRRIL
Trigger: CAGGATACGGCGTGTACGCCAAAGGGCAGAGGGTGG...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGAGGTGGTTCCAACATGTaGCCATGTGCAGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGGGSNM*PCAGPG
Trigger: ACCGGGCCCTGCACATGGCCACATGTTGGAACCACC...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp ACAGTTTACAGTGGACAGGAATTACAAAGTTGTGGCCATCCCATCAGCCAGCGTTGGTACTCATCTCCATaGCAACAGTGGGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TVYSGQELQSCGHPISQRWYSSP*QQWGCL
Trigger: CAAGCAGCCCCACTGTTGCCATGGAGATGAGTACCA...ACGCTGGCTGATGGGATGGCCACAACTTTGTAATTCCTGTCCACTGTAAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACTGGTACTCATCTCCATaGCAACAGTGGGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDWYSSP*QQWGCL
Trigger: CAAGCAGCCCCACTGTTGCCATGGAGATGAGTACCA...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCGGCTGCTCTCTGTGTaGTACTCATCTCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDRLLSV*YSSPWQ
Trigger: TTGCCATGGAGATGAGTACCACACAGAGAGCAGCCG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGAAGTCTGGAGAAAGATaGTCTCGCCCGGTGTATTCA +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLKSGER*SRPVYS
Trigger: TGAATACACCGGGCGAGACCATCTTTCTCCAGACTT...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCAAGTCTGGAGAAAGATaGTCTCGCCCGGTGTATTCA +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCKSGER*SRPVYS
Trigger: TGAATACACCGGGCGAGACCATCTTTCTCCAGACTT...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCTCATCATAGAAGTCTaGAGAAAGATGGTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLLIIEV*RKMVSP
Trigger: GGGCGAGACCATCTTTCTCCAGACTTCTATGATGAG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTCTGGGTTTGGGGACATaGTCAGTGGGTCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSLGLGT*SVGHSQ
Trigger: TTGACTATGACCCACTGACCATGTCCCCAAACCCAG...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGAGCAGCGTCTGGGTTTaGGGACATGGTCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGESSVWV*GHGQWV
Trigger: GACCCACTGACCATGTCCCCAAACCCAGACGCTGCT...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTGCTATGTGTGCTGTGGATGGTGTCTCGGGGCAAGGCATTTCAACAAATAATGCTCTTCAGCAGCGTCTaGGTTTGGGGACATGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLCVLWMVSRGKAFQQIMLFSSV*VWGHGQ
Trigger: CTGACCATGTCCCCAAACCCAGACGCTGCTGAAGAG...CATTATTTGTTGAAATGCCTTGCCCCGAGACACCATCCACAGCACACATAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 72 bp GGGTGGGGGTCAAGGTTGGGTTTTGGGAGTCCTCGTTaGGAATTAAAGCCAGTGACATGGATTTGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: GWGSRLGFGSPR*ELKPVTWIWKC
Trigger: ACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCTTGACCCCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000239036.2
CDS-3UTR TCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGGCTCCCAGCCCACGATaGCACTTTTGGCAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGEAPSPR*HFWQAV
Trigger: AACAGCTTGCCAAAAGTGTCATCGTGGGCTGGGAGC...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACACACGCCGTATCCTGTaGCATTTGCTCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDTRRIL*HLLHWT
Trigger: TGTCCAATGGAGCAAATGTCACAGGATACGGCGTGT...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp AGGTTGGGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGCCTTGCCTCAGCAGCTaGTCCATCATCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: RLGFGSPRLELKPVTWIWPCLSS*SIISSS
Trigger: TGATGAGGAGATGATGGATCAGCTGCTGAGGCAAGG...CCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGTTAAACTGCTCACTCTaGACACGGCATTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLLNCSL*TRHFSS
Trigger: GGAAGAGAAATGCCGTGTGCAGAGTGAGCAGTTTAA...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTACTGAGGGAAAGGCTTaGCAGGGGCCAAGGGAACAT +
Preference number: 4 (lower is better)
Translates to: GFGSPRLELKPVTWIWKCTEGKA*QGPREH
Trigger: ATGTTCCCTTGGCCCCTGGCAAGCCTTTCCCTCAGT...ACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACTCTCGGACTCAAATCTaGATCTTGGGCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYSRTQI*ILGCWI
Trigger: GATCCAGCAGCCCAAGATGCAGATTTGAGTCCGAGA...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACCCAGGGCAAGGCTCATaGGTGTCTCTTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDPGQGS*VSLCPP
Trigger: TGGTGGACAAAGAGACACGCATGAGCCTTGCCCTGG...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACCACCACCACATCCTTaGCCACCAGCAGAGTGCACT +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGPPPHP*PPAECT
Trigger: AGTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGG...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGTACTTGTACCTGGCTaGCTTCACGATGTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDVLVPG*LHDVQF
Trigger: GAACTGGACATCGTGAAGGCAGCCAGGTACAAGTAC...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACGTACTTGTACCTGGCTaGCTTCACGATGTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYVLVPG*LHDVQF
Trigger: GAACTGGACATCGTGAAGGCAGCCAGGTACAAGTAC...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCACCCAGTGGGAGTCAGTaGAGGGGGCTTCCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSPSGSQ*RGLPGD
Trigger: GTCTCCTGGAAGCCCCCTGCACTGACTCCCACTGGG...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGGTATCCTGTGACATTTaGTCCATTGGACAACCCAGT +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLVSCDI*SIGQPS
Trigger: ACTGGGTTGTCCAATGGAGCAAATGTCACAGGATAC...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTTTTTCTCTAACCTGTTaGTCTCAGCCACCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSFSLTC*SQPPSV
Trigger: CACAGAGGGTGGCTGAGAGCAACAGGTTAGAGAAAA...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GAAGCCACTGTGTCAAGTGAGGATGAAGACCAGGAATGCACAACACATGCGAAGTTTTCTCTAACCTGTTaGTCTCAGCCACCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EATVSSEDEDQECTTHAKFSLTC*SQPPSV
Trigger: CACAGAGGGTGGCTGAGAGCAACAGGTTAGAGAAAA...CTTCGCATGTGTTGTGCATTCCTGGTCTTCATCCTCACTTGACACAGTGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTTGGCAACAGTGGGGCTaGTTGCCCAGCTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFWQQWG*LPSSDP
Trigger: AGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTGCCA...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGAGGTCTGACCCCCGGCTaGTCTCTGTGTGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGGLTPG*SLCGTH
Trigger: ATGAGTACCACACAGAGAGCAGCCGGGGGTCAGACC...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGAGCCTGCTGCAGTAGCTaGATCTCCTGCTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGACCSS*ISCCLA
Trigger: TGCCAAGCAGCAGGAGATCCAGCTACTGCAGCAGGC...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCAGCCTGCTGCAGTAGCTaGATCTCCTGCTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPACCSS*ISCCLA
Trigger: TGCCAAGCAGCAGGAGATCCAGCTACTGCAGCAGGC...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTTTGTGGATGGAGGTaGCTAGTCCATTCATGTACT +
Preference number: 4 (lower is better)
Translates to: VGISLRCLRLLTYVTATCLCGWR*LVHSCT
Trigger: AGTACATGAATGGACTAGCCACCTCCATCCACAAAG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCTTTGTGGATGGAGGTaGCTAGTCCATTCATGTACT +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLLCGWR*LVHSCT
Trigger: AGTACATGAATGGACTAGCCACCTCCATCCACAAAG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCAGACTGATGCCAGAGTaGTTGAGAAAGTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGRLMPE*LRKFWS
Trigger: GGACCAGAACTTTCTCAACCACTCTGGCATCAGTCT...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCGAGTCCACTTGAGTTaGGGAGTGAAGGTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDRVHLS*GVKVKD
Trigger: ATCCTTCACCTTCACTCCCCAACTCAAGTGGACTCG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp TGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGACGAGTCCACTTGAGTTaGGGAGTGAAGGTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: WESSFGIKASDMDLEVSGRVHLS*GVKVKD
Trigger: ATCCTTCACCTTCACTCCCCAACTCAAGTGGACTCG...TCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGGGCTGTAGTTACTGTTaGTCGGCAGCCACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGEGCSYC*SAATRA
Trigger: AGCTCTCGTGGCTGCCGACCAACAGTAACTACAGCC...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGCTGTAGTTACTGTTaGTCGGCAGCCACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: FWESSFGIKASDMDLEVSGCSYC*SAATRA
Trigger: AGCTCTCGTGGCTGCCGACCAACAGTAACTACAGCC...GGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTATTGGTACTTGTACCTaGCTGCCTTCACGATGTCCA +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSIGTCT*LPSRCP
Trigger: TGGACATCGTGAAGGCAGCCAGGTACAAGTACCAAT...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGAGGCATCTGGTGTGGCTaGGCCAAGACCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGGIWCG*AKTFTL
Trigger: CAAGGTGAAGGTCTTGGCCCAGCCACACCAGATGCC...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGATCTCCATGGCAACAGTaGGGCTGCTTGCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGSPWQQ*GCLPSS
Trigger: AGAGCTGGGCAAGCAGCCCCACTGTTGCCATGGAGA...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCATCTCCATGGCAACAGTaGGGCTGCTTGCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPSPWQQ*GCLPSS
Trigger: AGAGCTGGGCAAGCAGCCCCACTGTTGCCATGGAGA...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCAAGTCTGGAGAAAGATaGTCTCGCCCGGTGTATTCA +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGKSGER*SRPVYS
Trigger: TGAATACACCGGGCGAGACCATCTTTCTCCAGACTT...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCTGGGTTTGGGGACATaGTCAGTGGGTCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDLGLGT*SVGHSQ
Trigger: TTGACTATGACCCACTGACCATGTCCCCAAACCCAG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGAAGCAGCGTCTGGGTTTaGGGACATGGTCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGSSVWV*GHGQWV
Trigger: GACCCACTGACCATGTCCCCAAACCCAGACGCTGCT...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCTTCTTCCAGGAAATTaGAAGGCACGAGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLLLPGN*KARGLF
Trigger: AAAAAGGCCTCGTGCCTTCCAATTTCCTGGAAGAAG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTAATGGAGATGGGCTGTaGGGGATGGAGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GFGSPRLELKPVTWIWKCNGDGL*GMELSL
Trigger: CAAGGAGAGCTCCATCCCCCACAGCCCATCTCCATT...ACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239036.2
3UTR CAA 72 bp CGGGAGGAACCTAGTAGGTACATTGCGACAGTTTTATaGAGTGCGTCAGCGCCAACAACAATTCACTGGGTA +
Preference number: 4 (lower is better)
Translates to: REEPSRYIATVL*SASAPTTIHWV
Trigger: TACCCAGTGAATTGTTGTTGGCGCTGACGCACTCAATAAAACTGTCGCAATGTACCTACTAGGTTCCTCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAATCTTGAGGGCGTTGTaGGAGGTACCGCTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSILRAL*EVPLGR
Trigger: TCGGCCCAGCGGTACCTCTCACAACGCCCTCAAGAT...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCAACTGAGGGAAAGGCTTaGCAGGGGCCAAGGGAACAT +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPTEGKA*QGPREH
Trigger: ATGTTCCCTTGGCCCCTGGCAAGCCTTTCCCTCAGT...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCATCCTTCTTTTCTCTCTaGTCCAGCGGCAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPSFFSL*SSGSCQ
Trigger: CTGGCAGCTGCCGCTGGAGCAGAGAGAAAAGAAGGA...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACTGCCCCGCACTGCTTTaGTCTAGAAAGAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDCPALL*SRKRLL
Trigger: AAGGAGCCTCTTTCTAGAGCAAAGCAGTGCGGGGCA...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTTTGCTGTTCGAGGCTAATGATAAAGATGGGTGTGGGGTGTCTGAGAGATTTCCTCAAATCTGCATCTTaGGCTGCTGGATCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: VCCSRLMIKMGVGCLRDFLKSAS*AAGSQE
Trigger: CTCTTGCGATCCAGCAGCCCAAGATGCAGATTTGAG...GAAATCTCTCAGACACCCCACACCCATCTTTATCATTAGCCTCGAACAGCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCTTCTGGGTTCTCATTaGGCCCATCGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: GFGSPRLELKPVTWIWKCLLGSH*AHRRGC
Trigger: ACAACCCCTTCGATGGGCCCAATGAGAACCCAGAAG...ACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCGCGACTCATTGTCCTaGATAAAATCCACAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GISLRCLRLLTYVTATCLRDSLS*IKSTKL
Trigger: CAACTTTGTGGATTTTATCCAGGACAATGAGTCGCG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCATTGTCCACACGCAGCTaGGACGGTGCCACCACCACA +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSLSTRS*DGATTT
Trigger: TGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGACAA...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACATTGGTACTTGTACCTaGCTGCCTTCACGATGTCCA +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDIGTCT*LPSRCP
Trigger: TGGACATCGTGAAGGCAGCCAGGTACAAGTACCAAT...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACCTGAGGTTGAAGAATTaGTACTTGTACCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYLRLKN*YLYLAA
Trigger: GGCAGCCAGGTACAAGTACCAATTCTTCAACCTCAG...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTAGTGACATCTTGTGGTaGGGCTGGAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFSDILW*GWRSCR
Trigger: CCTGCAGGACCTCCAGCCCCACCACAAGATGTCACT...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACTGGTACTCATCTCCATaGCAACAGTGGGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDWYSSP*QQWGCL
Trigger: CAAGCAGCCCCACTGTTGCCATGGAGATGAGTACCA...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGCGGCTGCTCTCTGTGTaGTACTCATCTCCATGGCAA +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGERLLSV*YSSPWQ
Trigger: TTGCCATGGAGATGAGTACCACACAGAGAGCAGCCG...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTTCCTCATCATCCGCATaGATCTCAGAGACCATGTTA +
Preference number: 4 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSSSSSA*ISETML
Trigger: TAACATGGTCTCTGAGATCCATGCGGATGATGAGGA...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTCCTCATCATCCGCATaGATCTCAGAGACCATGTTA +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGSSSSA*ISETML
Trigger: TAACATGGTCTCTGAGATCCATGCGGATGATGAGGA...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCCTTCTTCCAGGAAATTaGAAGGCACGAGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGLLPGN*KARGLF
Trigger: AAAAAGGCCTCGTGCCTTCCAATTTCCTGGAAGAAG...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR TCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGACACGCCGTATCCTGTaGCATTTGCTCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGETRRIL*HLLHWT
Trigger: TGTCCAATGGAGCAAATGTCACAGGATACGGCGTGT...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp GGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTACACGCCGTATCCTGTaGCATTTGCTCCATTGGACA +
Preference number: 4 (lower is better)
Translates to: GFGSPRLELKPVTWIWKCTRRIL*HLLHWT
Trigger: TGTCCAATGGAGCAAATGTCACAGGATACGGCGTGT...ACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAAGGAAGGCCAGGGCTTaGTCATGCTCCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSRKARA*SCSNSS
Trigger: GCTGGAGTTGGAGCATGAGCAAGCCCTGGCCTTCCT...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGATTAAACTGCTCACTCTaGACACGGCATTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WESSFGIKASDMDLEVSGLNCSL*TRHFSS
Trigger: GGAAGAGAAATGCCGTGTGCAGAGTGAGCAGTTTAA...TCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGTCTCGGACTCAAATCTaGATCTTGGGCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGESRTQI*ILGCWI
Trigger: GATCCAGCAGCCCAAGATGCAGATTTGAGTCCGAGA...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAGGCACCAAGCCCCTTTaGCCATCCAGAAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSGTKPL*PSRSSP
Trigger: AGGAGAGCTTCTGGATGGGCAAAGGGGCTTGGTGCC...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCACCACCACCACATCCTTaGCCACCAGCAGAGTGCACT +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSPPPHP*PPAECT
Trigger: AGTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGG...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGTATCCTGTGACATTTaGTCCATTGGACAACCCAGT +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDVSCDI*SIGQPS
Trigger: ACTGGGTTGTCCAATGGAGCAAATGTCACAGGATAC...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR GCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGATGCCCCGCACTGCTTTaGTCTAGAAAGAGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGCPALL*SRKRLL
Trigger: AAGGAGCCTCTTTCTAGAGCAAAGCAGTGCGGGGCA...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACCTTTGTGGATGGAGGTaGCTAGTCCATTCATGTACT +
Preference number: 4 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYLCGWR*LVHSCT
Trigger: AGTACATGAATGGACTAGCCACCTCCATCCACAAAG...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGCGTGACCTTTGTGGATaGAGGTGGCTAGTCCATTCA +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGERDLCG*RWLVHS
Trigger: TGAATGGACTAGCCACCTCCATCCACAAAGGTCACG...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGCTCAAATCTGCATCTTaGGCTGCTGGATCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGELKSAS*AAGSQE
Trigger: CTCTTGCGATCCAGCAGCCCAAGATGCAGATTTGAG...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AAGGGGGTGGAATTTGATTCAGGAACACTGTGTGCCAATTTCACTTCATTCTGCCTCAAATCTGCATCTTaGGCTGCTGGATCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KGVEFDSGTLCANFTSFCLKSAS*AAGSQE
Trigger: CTCTTGCGATCCAGCAGCCCAAGATGCAGATTTGAG...GCAGAATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAAATTCCACCCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCACTTCTGGGTTCTCATTaGGCCCATCGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPLLGSH*AHRRGC
Trigger: ACAACCCCTTCGATGGGCCCAATGAGAACCCAGAAG...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCCGCGACTCATTGTCCTaGATAAAATCCACAAAGTTG +
Preference number: 4 (lower is better)
Translates to: ESSFGIKASDMDLEVSGGRDSLS*IKSTKL
Trigger: CAACTTTGTGGATTTTATCCAGGACAATGAGTCGCG...GCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AAGGGGGTGGAATTTGATTCAGGAACACTGTGTGCCAATTTCACTTCATTCTGCTGGTTGAGAAAGTTCTaGTCCTGCTCACTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: KGVEFDSGTLCANFTSFCWLRKF*SCSLPR
Trigger: TCTGGGGAGTGAGCAGGACCAGAACTTTCTCAACCA...GCAGAATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAAATTCCACCCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTGGCTGTAGTTACTGTTaGTCGGCAGCCACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFGCSYC*SAATRA
Trigger: AGCTCTCGTGGCTGCCGACCAACAGTAACTACAGCC...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTGATTCAGGAACACTGTGTGCCAATTTCACTTCATTCTGCAGCTAGGCACACGAAGTCTGGAGAAAGATaGTCTCGCCCGGTGTATTCA +
Preference number: 4 (lower is better)
Translates to: LIQEHCVPISLHSAARHTKSGER*SRPVYS
Trigger: TGAATACACCGGGCGAGACCATCTTTCTCCAGACTT...CGTGTGCCTAGCTGCAGAATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTTTGCTGTTCGAGGCTAATGATAAAGATGGGTGTGGGGTGTCTGAGAGATTTCAAGTCTGGAGAAAGATaGTCTCGCCCGGTGTATTCA +
Preference number: 4 (lower is better)
Translates to: VCCSRLMIKMGVGCLRDFKSGER*SRPVYS
Trigger: TGAATACACCGGGCGAGACCATCTTTCTCCAGACTT...GAAATCTCTCAGACACCCCACACCCATCTTTATCATTAGCCTCGAACAGCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACCTGGGTTTGGGGACATaGTCAGTGGGTCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDLGLGT*SVGHSQ
Trigger: TTGACTATGACCCACTGACCATGTCCCCAAACCCAG...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCCTGGGTTTGGGGACATaGTCAGTGGGTCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: FWESSFGIKASDMDLEVSLGLGT*SVGHSQ
Trigger: TTGACTATGACCCACTGACCATGTCCCCAAACCCAG...GGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 72 bp AGTAAAAACAGTTTACAGTGGACAGGAATTACAAAGTaGTGGCCATCCCATCAGCCAGCGTCTGGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SKNSLQWTGITK*WPSHQPASGEV
Trigger: AACCTCCCCAGACGCTGGCTGATGGGATGGCCACAACTTTGTAATTCCTGTCCACTGTAAACTGTTTTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR TCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTAGTCCATTCATGTACTaGGGGAAAGGCTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFSPFMY*GKGLPG
Trigger: CCCTGGCAAGCCTTTCCCTCAGTACATGAATGGACT...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp TTGCTATGTGTGCTGTGGATGGTGTCTCGGGGCAAGGCATTTCAACAAATAATGGTATCCTGTGACATTTaGTCCATTGGACAACCCAGT +
Preference number: 4 (lower is better)
Translates to: LLCVLWMVSRGKAFQQIMVSCDI*SIGQPS
Trigger: ACTGGGTTGTCCAATGGAGCAAATGTCACAGGATAC...CATTATTTGTTGAAATGCCTTGCCCCGAGACACCATCCACAGCACACATAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGTATATTGCCCCGCACTaGTTTGCTCTAGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGEYIAPH*FALERG
Trigger: GCCTCTTTCTAGAGCAAAGCAGTGCGGGGCAATATA...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GCCCCCAAGCTTGCTTGGATTGAAAATCAAGGTCTAACTCTAATGGAGAACACCCTTTGTGGATGGAGGTaGCTAGTCCATTCATGTACT +
Preference number: 4 (lower is better)
Translates to: APKLAWIENQGLTLMENTLCGWR*LVHSCT
Trigger: AGTACATGAATGGACTAGCCACCTCCATCCACAAAG...GGTGTTCTCCATTAGAGTTAGACCTTGATTTTCAATCCAAGCAAGCTTGGGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCACTCAAATCTGCATCTTaGGCTGCTGGATCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPLKSAS*AAGSQE
Trigger: CTCTTGCGATCCAGCAGCCCAAGATGCAGATTTGAG...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCGCGACTCATTGTCCTaGATAAAATCCACAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDRDSLS*IKSTKL
Trigger: CAACTTTGTGGATTTTATCCAGGACAATGAGTCGCG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CCA 90 bp GGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTAGACTGATGCCAGAGTaGTTGAGAAAGTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GFGSPRLELKPVTWIWKCRLMPE*LRKFWS
Trigger: GGACCAGAACTTTCTCAACCACTCTGGCATCAGTCT...ACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACCTCATCATAGAAGTCTaGAGAAAGATGGTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDLIIEV*RKMVSP
Trigger: GGGCGAGACCATCTTTCTCCAGACTTCTATGATGAG...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GCCCCCAAGCTTGCTTGGATTGAAAATCAAGGTCTAACTCTAATGGAGAACACCCTTCTTCCAGGAAATTaGAAGGCACGAGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: APKLAWIENQGLTLMENTLLPGN*KARGLF
Trigger: AAAAAGGCCTCGTGCCTTCCAATTTCCTGGAAGAAG...GGTGTTCTCCATTAGAGTTAGACCTTGATTTTCAATCCAAGCAAGCTTGGGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTGGAGCATCAGAAAGGTaGACCTCCACATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFGASER*TSTSSG
Trigger: GCCTGATGATGTGGAGGTCCACCTTTCTGATGCTCC...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGTTAAACTGCTCACTCTaGACACGGCATTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ETIHFTMNLVARQLKPGELNCSL*TRHFSS
Trigger: GGAAGAGAAATGCCGTGTGCAGAGTGAGCAGTTTAA...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAATCTGCATCTTGGGCTaGTGGATCGCAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSICILG*WIARGR
Trigger: CCTTCCTCTTGCGATCCAGCAGCCCAAGATGCAGAT...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTCGTGACCTTTGTGGATaGAGGTGGCTAGTCCATTCA +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFRDLCG*RWLVHS
Trigger: TGAATGGACTAGCCACCTCCATCCACAAAGGTCACG...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCACTTCTGGGTTCTCATTaGGCCCATCGAAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSLLGSH*AHRRGC
Trigger: ACAACCCCTTCGATGGGCCCAATGAGAACCCAGAAG...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCAATTGGTACTTGTACCTaGCTGCCTTCACGATGTCCA +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPIGTCT*LPSRCP
Trigger: TGGACATCGTGAAGGCAGCCAGGTACAAGTACCAAT...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCACTGAGGTTGAAGAATTaGTACTTGTACCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VHAGALLCKQTALRNMFPLRLKN*YLYLAA
Trigger: GGCAGCCAGGTACAAGTACCAATTCTTCAACCTCAG...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCATGGTACTCATCTCCATaGCAACAGTGGGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSWYSSP*QQWGCL
Trigger: CAAGCAGCCCCACTGTTGCCATGGAGATGAGTACCA...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACTCCTCATCATCCGCATaGATCTCAGAGACCATGTTA +
Preference number: 4 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDSSSSA*ISETML
Trigger: TAACATGGTCTCTGAGATCCATGCGGATGATGAGGA...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCACGTGACCTTTGTGGATaGAGGTGGCTAGTCCATTCA +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSRDLCG*RWLVHS
Trigger: TGAATGGACTAGCCACCTCCATCCACAAAGGTCACG...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCATGGTTGAGAAAGTTCTaGTCCTGCTCACTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSWLRKF*SCSLPR
Trigger: TCTGGGGAGTGAGCAGGACCAGAACTTTCTCAACCA...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTAGACTGATGCCAGAGTaGTTGAGAAAGTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFRLMPE*LRKFWS
Trigger: GGACCAGAACTTTCTCAACCACTCTGGCATCAGTCT...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACTTCTTCCAGGAAATTaGAAGGCACGAGGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGLLPGN*KARGLF
Trigger: AAAAAGGCCTCGTGCCTTCCAATTTCCTGGAAGAAG...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCATTAAACTGCTCACTCTaGACACGGCATTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSLNCSL*TRHFSS
Trigger: GGAAGAGAAATGCCGTGTGCAGAGTGAGCAGTTTAA...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR GCA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAGTATCCTGTGACATTTaGTCCATTGGACAACCCAGT +
Preference number: 4 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSVSCDI*SIGQPS
Trigger: ACTGGGTTGTCCAATGGAGCAAATGTCACAGGATAC...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CCA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTCGCGACTCATTGTCCTaGATAAAATCCACAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFRDSLS*IKSTKL
Trigger: CAACTTTGTGGATTTTATCCAGGACAATGAGTCGCG...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
3UTR CAA 72 bp TGTAAACAAACAGCTTTAAGAAATATGTTCCCAAGGTaGGCCTTTCCCGTATTCTCAACGGACACATTTAAA +
Preference number: 4 (lower is better)
Translates to: CKQTALRNMFPR*AFPVFSTDTFK
Trigger: TTTAAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS CCA 90 bp TCGTCCCAGCCATCCCTCCTGGGCATGGGCCTCTCCGGGCTGGGCTaGGTGTCATCGCTCCTGATGACGTCACTGGGGTCCACCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SSQPSLLGMGLSGLG*VSSLLMTSLGSTCS
Trigger: GGAGCAGGTGGACCCCAGTGACGTCATCAGGAGCGATGACACCCAGCCCAGCCCGGAGAGGCCCATGCCCAGGAGGGATGGCTGGGACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS TCA 90 bp GCCATGGCCTTGGCGACAGTGGTAGACACGGGGGCTCCTTGTGGCTaGGGAAGGATCCGGCTGGGCGAGGGTGACCTTCTGCCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: AMALATVVDTGAPCG*GRIRLGEGDLLPGP
Trigger: TGGCCCAGGCAGAAGGTCACCCTCGCCCAGCCGGATCCTTCCTCAGCCACAAGGAGCCCCCGTGTCTACCACTGTCGCCAAGGCCATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS TCA 90 bp CTCCGCCGGGCCAGCAGGGGCCTCGGGCTTCTCCTACAGGGACAGTaGCCAGGGCCTGGACTGCACTTAGCCGAGGTGCTCCTGAAACTA +
Preference number: 5 (lower is better)
Translates to: LRRASRGLGLLLQGQ*PGPGLHLAEVLLKL
Trigger: TAGTTTCAGGAGCACCTCGGCTAAGTGCAGTCCAGGCCCTGGTCACTGTCCCTGTAGGAGAAGCCCGAGGCCCCTGCTGGCCCGGCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS-3UTR CAA 90 bp CCAGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCAACAGTGGGGCTGCTaGCCCAGCTCTGACCCTTTG +
Preference number: 5 (lower is better)
Translates to: PDLGQNLGSGGGGDHGAAQQWGC*PSSDPL
Trigger: CAAAGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTG...GGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCCCAGCAGCGTCTGGGTTaGGGGACATGGTCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: RPWTEPWERRGRGPRCSPQQRLG*GTWSVG
Trigger: ACCCACTGACCATGTCCCCAAACCCAGACGCTGCTG...GGGGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS GCA 90 bp TGGGACGGTGCCACCACCACATCCTTGCCCACCAGCAGAGTGCACTaGAGCTCGTCTGAGTTTCCCCGGCTCGTGACGCACTGCACGGAG +
Preference number: 5 (lower is better)
Translates to: WDGATTTSLPTSRVH*SSSEFPRLVTHCTE
Trigger: CTCCGTGCAGTGCGTCACGAGCCGGGGAAACTCAGACGAGCTGCAGTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGCACCGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS-3UTR CAA 90 bp CCAGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCTGGATCTCCTGCTGCTaGGCATTGAGGAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PDLGQNLGSGGGGDHGAAWISCC*ALRKAR
Trigger: CCTGGCCTTCCTCAATGCCAAGCAGCAGGAGATCCA...GGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS TCA 90 bp GTGCATGTCAGGTGGTTCCAACATGTGGCCATGTGCAGGGCCCGGTaGCCGGCTCTGCTCCCAGGACTCATCCACTTTGACGTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: VHVRWFQHVAMCRAR*PALLPGLIHFDVGP
Trigger: GGGCCCCACGTCAAAGTGGATGAGTCCTGGGAGCAGAGCCGGTCACCGGGCCCTGCACATGGCCACATGTTGGAACCACCTGACATGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS TCA 90 bp CGAATGGAGATGGGCTGTGGGGGATGGAGCTCTCCTTGCTGTCCCTaGACCCTCGGGAGGAACCCTTTTGGCCTTGGAGCGCATGGGCGG +
Preference number: 5 (lower is better)
Translates to: RMEMGCGGWSSPCCP*TLGRNPFGLGAHGR
Trigger: CCGCCCATGCGCTCCAAGGCCAAAAGGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGAGAGCTCCATCCCCCACAGCCCATCTCCATTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000239036.2
CDS GCA 90 bp GGGCAAGGCTCATGCGTGTCTCTTTGTCCACCAGCACATTATAACTaGTCACGGTGCCCCAGCCGGGAGGCACAGCAGGGGGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: GQGSCVSLCPPAHYN*SRCPSREAQQGAPS
Trigger: GCTGGGAGCCCCCTGCTGTGCCTCCCGGCTGGGGCACCGTGAGCAGTTATAATGTGCTGGTGGACAAAGAGACACGCATGAGCCTTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS TCA 90 bp CACCACCACATCCTTGCCCACCAGCAGAGTGCACTGCAGCTCGTCTaGGTTTCCCCGGCTCGTGACGCACTGCACGGAGATGCGGTAGGT +
Preference number: 5 (lower is better)
Translates to: HHHILAHQQSALQLV*VSPARDALHGDAVG
Trigger: ACCTACCGCATCTCCGTGCAGTGCGTCACGAGCCGGGGAAACTCAGACGAGCTGCAGTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS TCA 90 bp GCTCGTCCCATCAACGTGGAGTTTCCTAAAATCTTGAGGGCGTTGTaGGAGGTACCGCTGGGCCGACGGCGGCCCCCATCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ARPINVEFPKILRAL*EVPLGRRRPPSSSC
Trigger: GCAGCTGGAGGATGGGGGCCGCCGTCGGCCCAGCGGTACCTCTCACAACGCCCTCAAGATTTTAGGAAACTCCACGTTGATGGGACGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp AGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCCGCCAGCCGCGACTCATaGTCCTGGATAAAATCCACA +
Preference number: 5 (lower is better)
Translates to: RPWTEPWERRGRGPRCSPASRDS*SWIKST
Trigger: TGTGGATTTTATCCAGGACAATGAGTCGCGGCTGGC...GGGGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GTGCCAATTTCACTTCATTCTGCAGCTAGGCACACGCCTGGGCGTGGCCAGGGACGCACACTCACGGCCTaGGCCTCTAGGCTTCGCAGC +
Preference number: 5 (lower is better)
Translates to: VPISLHSAARHTPGRGQGRTLTA*ASRLRS
Trigger: GCTGCGAAGCCTAGAGGCCAAGGCCGTGAGTGTGCG...TCCCTGGCCACGCCCAGGCGTGTGCCTAGCTGCAGAATGAAGTGAAATTGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS TCA 90 bp GTGCAGGGCCCGGTGACCGGCTCTGCTCCCAGGACTCATCCACTTTaGCGTGGGGCCCCAGGTGTTGGTCTTTGGTATCCATGTCACTTG +
Preference number: 5 (lower is better)
Translates to: VQGPVTGSAPRTHPL*RGAPGVGLWYPCHL
Trigger: CAAGTGACATGGATACCAAAGACCAACACCTGGGGCCCCACGTCAAAGTGGATGAGTCCTGGGAGCAGAGCCGGTCACCGGGCCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 90 bp CTGGGCAGAGATCTGTGTGATGTTGTCCACACGCAGCTGGGACGGTaGCACCACCACATCCTTGCCCACCAGCAGAGTGCACTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: LGRDLCDVVHTQLGR*HHHILAHQQSALQL
Trigger: GAGCTGCAGTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGACAACATCACACAGATCTCTGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 90 bp CACGAGAGCTGGGCAGAGATCTGTGTGATGTTGTCCACACGCAGCTaGGACGGTGCCACCACCACATCCTTGCCCACCAGCAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: HESWAEICVMLSTRS*DGATTTSLPTSRVH
Trigger: GTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGACAACATCACACAGATCTCTGCCCAGCTCTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 90 bp TCCTCCTCAGCTACCTCGGGGATACTGAACAGTCTCTTACTGCGGTaGGGCTGTTGGGGGAACTCGGGCTGCTCCAGGAAAGCGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SSSATSGILNSLLLR*GCWGNSGCSRKAPS
Trigger: GGAAGGCGCTTTCCTGGAGCAGCCCGAGTTCCCCCAACAGCCCCACCGCAGTAAGAGACTGTTCAGTATCCCCGAGGTAGCTGAGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS-3UTR CAA 90 bp CCAGACCTTGGACAGAACCTTGGGAGCGGAGGGGGAGGGGACCACGGTGCAGCCCTTCCCCGAGCTGCTTaGCTTGGAGTTGTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: PDLGQNLGSGGGGDHGAALPRAA*LGVVRV
Trigger: AACTCTAACAACTCCAAGCAAAGCAGCTCGGGGAAG...GGCTGCACCGTGGTCCCCTCCCCCTCCGCTCCCAAGGTTCTGTCCAAGGTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GAGGGGCTGGCCCTCCATGGGCTTTCGCCGTCTTTGTCTTGGGAGACGGGGTGGGTGACATTTGCTCCATaGGACAACCCAGTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: EGLALHGLSPSLSWETGWVTFAP*DNPVGV
Trigger: GACTCCCACTGGGTTGTCCAATGGAGCAAATGTCAC...CCACCCCGTCTCCCAAGACAAAGACGGCGAAAGCCCATGGAGGGCCAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS GCA 90 bp AGTAGCTGGATCTCCTGCTGCTTGGCATTGAGGAAGGCCAGGGCTTaGTCATGCTCCAACTCCAGCTGTTGCCGCCGCTCAGCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: SSWISCCLALRKARA*SCSNSSCCRRSAAS
Trigger: AGAGGCTGCTGAGCGGCGGCAACAGCTGGAGTTGGAGCATGAGCAAGCCCTGGCCTTCCTCAATGCCAAGCAGCAGGAGATCCAGCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000199737.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 90 bp TCCTCCATGATGTCCGACAGGTCTGACCCCCGGCTGCTCTCTGTGTaGTACTCATCTCCATGGCAACAGTGGGGCTGCTTGCCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SSMMSDRSDPRLLSV*YSSPWQQWGCLPSS
Trigger: AGAGCTGGGCAAGCAGCCCCACTGTTGCCATGGAGATGAGTACCACACAGAGAGCAGCCGGGGGTCAGACCTGTCGGACATCATGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS-3UTR CAA 90 bp ACCCTCTCCCAAGGCCCCTCTGAGAGAGAGGGGCTGGCCCTCCATGGGCTTTCGCTTCCCCGAGCTGCTTaGCTTGGAGTTGTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: TLSQGPSEREGLALHGLSLPRAA*LGVVRV
Trigger: AACTCTAACAACTCCAAGCAAAGCAGCTCGGGGAAG...CGAAAGCCCATGGAGGGCCAGCCCCTCTCTCTCAGAGGGGCCTTGGGAGAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp CCAGAACCCATAGATGACGTAGGTGACCCCGAATGGAGATGGGCTGTGGGGGATTCACGGGCCATGGCCTaGGCGACAGTGGTAGACACG +
Preference number: 5 (lower is better)
Translates to: PEPIDDVGDPEWRWAVGDSRAMA*ATVVDT
Trigger: CGTGTCTACCACTGTCGCCAAGGCCATGGCCCGTGA...ATCCCCCACAGCCCATCTCCATTCGGGGTCACCTACGTCATCTATGGGTTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS TCA 90 bp AGTTACTGTTGGTCGGCAGCCACGAGAGCTGGGCAGAGATCTGTGTaGTGTTGTCCACACGCAGCTGGGACGGTGCCACCACCACATCCT +
Preference number: 5 (lower is better)
Translates to: SYCWSAATRAGQRSV*CCPHAAGTVPPPHP
Trigger: AGGATGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGACAACATCACACAGATCTCTGCCCAGCTCTCGTGGCTGCCGACCAACAGTAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 90 bp AAGGCTTGCCAGGGGCCAAGGGAACATCCAGCAGGGCCACTGAGCTaGTGCCCAGCAGGTCAATACTCCCAGTGTGTTGCCGGAACTTTT +
Preference number: 5 (lower is better)
Translates to: KACQGPREHPAGPLS*CPAGQYSQCVAGTF
Trigger: AAAAGTTCCGGCAACACACTGGGAGTATTGACCTGCTGGGCAGCAGCTCAGTGGCCCTGCTGGATGTTCCCTTGGCCCCTGGCAAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 90 bp TCGCGCTCCAGACTGATGCCAGAGTGGTTGAGAAAGTTCTGGTCCTaGTCACTCCCCAGAGTACCAGCCAGCCGCGACTCATTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SRSRLMPEWLRKFWS*SLPRVPASRDSLSW
Trigger: CCAGGACAATGAGTCGCGGCTGGCTGGTACTCTGGGGAGTGAGCAGGACCAGAACTTTCTCAACCACTCTGGCATCAGTCTGGAGCGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 90 bp AGCCACCCTCTGCCCTTTGGCGTACACGCCGTATCCTGTGACATTTaGTCCATTGGACAACCCAGTGGGAGTCAGTGCAGGGGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SHPLPFGVHAVSCDI*SIGQPSGSQCRGLP
Trigger: TGGAAGCCCCCTGCACTGACTCCCACTGGGTTGTCCAATGGAGCAAATGTCACAGGATACGGCGTGTACGCCAAAGGGCAGAGGGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 90 bp CTGAACAGTCTCTTACTGCGGTGGGGCTGTTGGGGGAACTCGGGCTaGTCCAGGAAAGCGCCTTCCAAGCTCCTAGCCTTATGGCATTCC +
Preference number: 5 (lower is better)
Translates to: LNSLLLRWGCWGNSG*SRKAPSKLLALWHS
Trigger: GGAATGCCATAAGGCTAGGAGCTTGGAAGGCGCTTTCCTGGAGCAGCCCGAGTTCCCCCAACAGCCCCACCGCAGTAAGAGACTGTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS CCA 90 bp GGGCCCGGTGACCGGCTCTGCTCCCAGGACTCATCCACTTTGACGTaGGGCCCCAGGTGTTGGTCTTTGGTATCCATGTCACTTGCTAAT +
Preference number: 5 (lower is better)
Translates to: GPGDRLCSQDSSTLT*GPRCWSLVSMSLAN
Trigger: ATTAGCAAGTGACATGGATACCAAAGACCAACACCTGGGGCCCCACGTCAAAGTGGATGAGTCCTGGGAGCAGAGCCGGTCACCGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 90 bp GACCCCCGGCTGCTCTCTGTGTGGTACTCATCTCCATGGCAACAGTaGGGCTGCTTGCCCAGCTCTGACCCTTTGAGGAAGTCATCCACT +
Preference number: 5 (lower is better)
Translates to: DPRLLSVWYSSPWQQ*GCLPSSDPLRKSST
Trigger: AGTGGATGACTTCCTCAAAGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTGCCATGGAGATGAGTACCACACAGAGAGCAGCCGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 90 bp CGGCTGAACCGACAGCCTCTGTCTTCCAGAAAGATATCCTCCATATaGATGCCTGGGCCCCTGTGCTCTGCAGGGAGCCAGGATCCCTGT +
Preference number: 5 (lower is better)
Translates to: RLNRQPLSSRKISSI*MPGPLCSAGSQDPC
Trigger: ACAGGGATCCTGGCTCCCTGCAGAGCACAGGGGCCCAGGCATCCATATGGAGGATATCTTTCTGGAAGACAGAGGCTGTCGGTTCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS-3UTR CAA 90 bp ACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGCCCCGAGCTGCTTTGCTaGGAGTTGTTAGAGTTCCGG +
Preference number: 5 (lower is better)
Translates to: TWRVRPGHSAGTQYKARGPELLC*ELLEFR
Trigger: CCGGAACTCTAACAACTCCAAGCAAAGCAGCTCGGG...GCCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GTGGGGCCCAAGTCAGGAAAGCAGCAATGCAAAGATTGCGCCAGATGGCAGAGAGCCACCCTCTGCCCTTaGGCGTACACGCCGTATCCT +
Preference number: 5 (lower is better)
Translates to: VGPKSGKQQCKDCARWQRATLCP*AYTPYP
Trigger: AGGATACGGCGTGTACGCCAAAGGGCAGAGGGTGGC...TCTCTGCCATCTGGCGCAATCTTTGCATTGCTGCTTTCCTGACTTGGGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp ACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGCCCCAGCTCTGACCCTTaGAGGAAGTCATCCACTGAG +
Preference number: 5 (lower is better)
Translates to: TWRVRPGHSAGTQYKARGPSSDP*RKSSTE
Trigger: CTCAGTGGATGACTTCCTCAAAGGGTCAGAGCTGGG...GCCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS TCA 90 bp TGCCACAGTCCAAACCACTGTCCGGGCTCCTGGTGGCCGAGCGGCTaGACCGACAGCCTCTGTCTTCCAGAAAGATATCCTCCATATGGA +
Preference number: 5 (lower is better)
Translates to: CHSPNHCPGSWWPSG*TDSLCLPERYPPYG
Trigger: TCCATATGGAGGATATCTTTCTGGAAGACAGAGGCTGTCGGTTCAGCCGCTCGGCCACCAGGAGCCCGGACAGTGGTTTGGACTGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS GCA 90 bp CTGTCTTCCAGAAAGATATCCTCCATATGGATGCCTGGGCCCCTGTaGTCTGCAGGGAGCCAGGATCCCTGTAGGACCGGATGTCCCCAA +
Preference number: 5 (lower is better)
Translates to: LSSRKISSIWMPGPL*SAGSQDPCRTGCPQ
Trigger: TTGGGGACATCCGGTCCTACAGGGATCCTGGCTCCCTGCAGAGCACAGGGGCCCAGGCATCCATATGGAGGATATCTTTCTGGAAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS CCA 90 bp CTTCTTTTCTCTCTGCTCCAGCGGCAGCTGCCAGGGCATCTGGTGTaGCTGGGCCAAGACCTTCACCTTGTAGGCCATATTAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LLFSLLQRQLPGHLV*LGQDLHLVGHIRPE
Trigger: CTCAGGCCTAATATGGCCTACAAGGTGAAGGTCTTGGCCCAGCCACACCAGATGCCCTGGCAGCTGCCGCTGGAGCAGAGAGAAAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 90 bp GAAGTCTGGAGAAAGATGGTCTCGCCCGGTGTATTCATCAATGGATaGAGCCATCGCTGGGCGGTGCCTATGAGACCCTCCGCCACTGTG +
Preference number: 5 (lower is better)
Translates to: EVWRKMVSPGVFING*SHRWAVPMRPSATV
Trigger: CACAGTGGCGGAGGGTCTCATAGGCACCGCCCAGCGATGGCTCCATCCATTGATGAATACACCGGGCGAGACCATCTTTCTCCAGACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 90 bp ACCTTCGGCTCACGTGTTCCATCCGGTCTGCTCGTCCCATCAACGTaGAGTTTCCTAAAATCAAAGGGCCGTCTGCCACTCGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TFGSRVPSGLLVPST*SFLKSKGRLPLGEE
Trigger: CTCCTCCCCGAGTGGCAGACGGCCCTTTGATTTTAGGAAACTCCACGTTGATGGGACGAGCAGACCGGATGGAACACGTGAGCCGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS-3UTR CAA 90 bp CCTCGTAGGTACATGCGTACCTCCATGAGCTCGGGACAATTGTGCTTTGAGGAGGGGCACCAAGCCCCTTaGCCCATCCAGAAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PRRYMRTSMSSGQLCFEEGHQAP*PIQKLS
Trigger: GGAGAGCTTCTGGATGGGCAAAGGGGCTTGGTGCCC...CTCCTCAAAGCACAATTGTCCCGAGCTCATGGAGGTACGCATGTACCTACGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCGCACACTCACGGCCTaGGCCTCTAGGCTTCGCAGC +
Preference number: 5 (lower is better)
Translates to: VGISLRCLRLLTYVTATCRTLTA*ASRLRS
Trigger: GCTGCGAAGCCTAGAGGCCAAGGCCGTGAGTGTGCG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp CCGGACTCCCGCCAGCCAGGGGAAAGGGTAGGTTGGGTGGTGGTTCGTTTCTTCCTTTTCTCTAACCTGTaGCTCTCAGCCACCCTCTGT +
Preference number: 5 (lower is better)
Translates to: PDSRQPGERVGWVVVRFFLFSNL*LSATLC
Trigger: ACAGAGGGTGGCTGAGAGCAACAGGTTAGAGAAAAG...GAAGAAACGAACCACCACCCAACCTACCCTTTCCCCTGGCTGGCGGGAGTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS TCA 90 bp TCTCCTCATCATCCGCATGGATCTCAGAGACCATGTTACAGGGAATaGGGCCGAGCCTGGCACAGGTCTCCCCACGGTAGAAGCCATCTG +
Preference number: 5 (lower is better)
Translates to: SPHHPHGSQRPCYRE*GRAWHRSPHGRSHL
Trigger: CAGATGGCTTCTACCGTGGGGAGACCTGTGCCAGGCTCGGCCTCATTCCCTGTAACATGGTCTCTGAGATCCATGCGGATGATGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 90 bp CATAGAAGTCTGGAGAAAGATGGTCTCGCCCGGTGTATTCATCAATaGATGGAGCCATCGCTGGGCGGTGCCTATGAGACCCTCCGCCAC +
Preference number: 5 (lower is better)
Translates to: HRSLEKDGLARCIHQ*MEPSLGGAYETLRH
Trigger: GTGGCGGAGGGTCTCATAGGCACCGCCCAGCGATGGCTCCATCCATTGATGAATACACCGGGCGAGACCATCTTTCTCCAGACTTCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS-3UTR CAA 90 bp TCCTTGCTGTCCCTGAACCCTCGGGAGGAACCTAGTAGGTACATTGCGACAGTTTCCAGCTCTCGGACCTaGGACTGCATGCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SLLSLNPREEPSRYIATVSSSRT*DCMQSR
Trigger: CCTGGACTGCATGCAGTCCAAGGTCCGAGAGCTGGA...AACTGTCGCAATGTACCTACTAGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198941.5
CDS-3UTR CAA 90 bp TGTGCACCTACCTACTGTGCAGGCCAGGGGAAGACCCTGGGGTCAGGCAGACTGATAAAATCCACAAAGTaGGAGGGCACCAAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: CAPTYCAGQGKTLGSGRLIKSTK*EGTKPL
Trigger: AAGGGGCTTGGTGCCCTCCAACTTTGTGGATTTTAT...CAGTCTGCCTGACCCCAGGGTCTTCCCCTGGCCTGCACAGTAGGTAGGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp CCTCGTAGGTACATGCGTACCTCCATGAGCTCGGGACAATTGTGCTTTGAGGAGGTGGACAGTGACATCTaGTGGTGGGGCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: PRRYMRTSMSSGQLCFEEVDSDI*WWGWRS
Trigger: GGACCTCCAGCCCCACCACAAGATGTCACTGTCCAC...CTCCTCAAAGCACAATTGTCCCGAGCTCATGGAGGTACGCATGTACCTACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCGCCACCCTCTGCCCTTaGGCGTACACGCCGTATCCT +
Preference number: 5 (lower is better)
Translates to: VGISLRCLRLLTYVTATCATLCP*AYTPYP
Trigger: AGGATACGGCGTGTACGCCAAAGGGCAGAGGGTGGC...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTCGCACACTCACGGCCTaGGCCTCTAGGCTTCGCAGC +
Preference number: 5 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSRTLTA*ASRLRS
Trigger: GCTGCGAAGCCTAGAGGCCAAGGCCGTGAGTGTGCG...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS CCA 90 bp ACTGCTCACTCTGCACACGGCATTTCTCTTCCAGCTCTCGGACCTTaGACTGCATGCAGTCCAGGGTGTTCTCTAACAGCTGCACAGCAC +
Preference number: 5 (lower is better)
Translates to: TAHSAHGISLPALGP*TACSPGCSLTAAQH
Trigger: GTGCTGTGCAGCTGTTAGAGAACACCCTGGACTGCATGCAGTCCAAGGTCCGAGAGCTGGAAGAGAAATGCCGTGTGCAGAGTGAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
CDS CCA 90 bp TCCGGTCATTGTCCATCTCGGACTCAAATCTGCATCTTGGGCTGCTaGATCGCAAGAGGAAGGAGGGCTTCACACACGGAGACTCCAGCT +
Preference number: 5 (lower is better)
Translates to: SGHCPSRTQICILGC*IARGRRASHTETPA
Trigger: AGCTGGAGTCTCCGTGTGTGAAGCCCTCCTTCCTCTTGCGATCCAGCAGCCCAAGATGCAGATTTGAGTCCGAGATGGACAATGACCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS-3UTR CAA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTGGGCACCAAGCCCCTTaGCCCATCCAGAAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSGHQAP*PIQKLS
Trigger: GGAGAGCTTCTGGATGGGCAAAGGGGCTTGGTGCCC...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp ACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCAAGGGGCATAAAATCCACAAAGTaGGAGGGCACCAAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: TWRVRPGHSAGTQYKARGIKSTK*EGTKPL
Trigger: AAGGGGCTTGGTGCCCTCCAACTTTGTGGATTTTAT...GCCCCTTGCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCGCCACCACCACATCCTaGCCCACCAGCAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: ESSFGIKASDMDLEVSGGATTTS*PTSRVH
Trigger: GTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGC...GCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCGCCACCACCACATCCTaGCCCACCAGCAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGATTTS*PTSRVH
Trigger: GTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGC...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGGTGGACAGTGACATCTaGTGGTGGGGCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GISLRCLRLLTYVTATCLVDSDI*WWGWRS
Trigger: GGACCTCCAGCCCCACCACAAGATGTCACTGTCCAC...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCGTGGACAGTGACATCTaGTGGTGGGGCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: VGISLRCLRLLTYVTATCVDSDI*WWGWRS
Trigger: GGACCTCCAGCCCCACCACAAGATGTCACTGTCCAC...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp CCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCTCAGGCCACCCTCTGCCCTTaGGCGTACACGCCGTATCCT +
Preference number: 5 (lower is better)
Translates to: PRLELKPVTWIWKCPEAQATLCP*AYTPYP
Trigger: AGGATACGGCGTGTACGCCAAAGGGCAGAGGGTGGC...CTGAGCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCAACAGTGGGGCTGCTaGCCCAGCTCTGACCCTTTG +
Preference number: 5 (lower is better)
Translates to: GISLRCLRLLTYVTATCLQQWGC*PSSDPL
Trigger: CAAAGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GAAGCCACTGTGTCAAGTGAGGATGAAGACCAGGAATGCACAACACATGCGAAGCTTACCCTTTTGGCCTaGGAGCGCATGGGCGGGTCG +
Preference number: 5 (lower is better)
Translates to: EATVSSEDEDQECTTHAKLTLLA*ERMGGS
Trigger: CGACCCGCCCATGCGCTCCAAGGCCAAAAGGGTAAG...CTTCGCATGTGTTGTGCATTCCTGGTCTTCATCCTCACTTGACACAGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
CDS TCA 90 bp TTCTCCACAGGCGTGTTCAGAGGGAGGAAGCCTTGCCTCAGCAGCTaGTCCATCATCTCCTCATCATCCGCATGGATCTCAGAGACCATG +
Preference number: 5 (lower is better)
Translates to: FSTGVFRGRKPCLSS*SIISSSSAWISETM
Trigger: CATGGTCTCTGAGATCCATGCGGATGATGAGGAGATGATGGATCAGCTGCTGAGGCAAGGCTTCCTCCCTCTGAACACGCCTGTGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 90 bp AGTTCCGGTCATTGTCCATCTCGGACTCAAATCTGCATCTTGGGCTaGTGGATCGCAAGAGGAAGGAGGGCTTCACACACGGAGACTCCA +
Preference number: 5 (lower is better)
Translates to: SSGHCPSRTQICILG*WIARGRRASHTETP
Trigger: TGGAGTCTCCGTGTGTGAAGCCCTCCTTCCTCTTGCGATCCAGCAGCCCAAGATGCAGATTTGAGTCCGAGATGGACAATGACCGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 90 bp CAATCACAGAGTAGTGTCCAGTGGGGCCCTCGTGACCTTTGTGGATaGAGGTGGCTAGTCCATTCATGTACTGAGGGAAAGGCTTGCCAG +
Preference number: 5 (lower is better)
Translates to: QSQSSVQWGPRDLCG*RWLVHSCTEGKACQ
Trigger: CTGGCAAGCCTTTCCCTCAGTACATGAATGGACTAGCCACCTCCATCCACAAAGGTCACGAGGGCCCCACTGGACACTACTCTGTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 90 bp CCCCAGACAGCGGAATATAGTCACCAATCACAGAGTAGTGTCCAGTaGGGCCCTCGTGACCTTTGTGGATGGAGGTGGCTAGTCCATTCA +
Preference number: 5 (lower is better)
Translates to: PQTAEYSHQSQSSVQ*GPRDLCGWRWLVHS
Trigger: TGAATGGACTAGCCACCTCCATCCACAAAGGTCACGAGGGCCCCACTGGACACTACTCTGTGATTGGTGACTATATTCCGCTGTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS-3UTR CAA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGTGGATCTCCTGCTGCTaGGCATTGAGGAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GISLRCLRLLTYVTATCLWISCC*ALRKAR
Trigger: CCTGGCCTTCCTCAATGCCAAGCAGCAGGAGATCCA...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCTGGATCTCCTGCTGCTaGGCATTGAGGAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: VGISLRCLRLLTYVTATCWISCC*ALRKAR
Trigger: CCTGGCCTTCCTCAATGCCAAGCAGCAGGAGATCCA...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTTCCAGCTCTCGGACCTaGGACTGCATGCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSSSSRT*DCMQSR
Trigger: CCTGGACTGCATGCAGTCCAAGGTCCGAGAGCTGGA...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
CDS-3UTR CAA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGGCTTCTGGGTTCTCATaGGGCCCATCGAAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: GISLRCLRLLTYVTATCLASGFS*GPSKGL
Trigger: CAACCCCTTCGATGGGCCCAATGAGAACCCAGAAGC...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGGCACCAAGCCCCTTaGCCCATCCAGAAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDGHQAP*PIQKLS
Trigger: GGAGAGCTTCTGGATGGGCAAAGGGGCTTGGTGCCC...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGCCACCACCACATCCTaGCCCACCAGCAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDATTTS*PTSRVH
Trigger: GTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGC...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GCTGGGTATTCCACCAGCTTTGGCATGCCCAGAGCCAAGGCCACCCCTTGGGGCATATTAGGCCTGAGGTaGAAGAATTGGTACTTGTAC +
Preference number: 5 (lower is better)
Translates to: AGYSTSFGMPRAKATPWGILGLR*KNWYLY
Trigger: GTACAAGTACCAATTCTTCAACCTCAGGCCTAATAT...GCCCCAAGGGGTGGCCTTGGCTCTGGGCATGCCAAAGCTGGTGGAATACCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACGCCACCCTCTGCCCTTaGGCGTACACGCCGTATCCT +
Preference number: 5 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYATLCP*AYTPYP
Trigger: AGGATACGGCGTGTACGCCAAAGGGCAGAGGGTGGC...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCACTTGCTAATGGCTTaGGTGGGGGAGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: VGISLRCLRLLTYVTATCHLLMA*VGEQSS
Trigger: CGAGGACTGCTCCCCCACCAAAGCCATTAGCAAGTG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTCAGGACTCATCCACTTaGACGTGGGGCCCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSQDSST*TWGPRC
Trigger: ACACCTGGGGCCCCACGTCAAAGTGGATGAGTCCTG...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACTCACGGGCCATGGCCTaGGCGACAGTGGTAGACACG +
Preference number: 5 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDSRAMA*ATVVDT
Trigger: CGTGTCTACCACTGTCGCCAAGGCCATGGCCCGTGA...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCCAACAGTGGGGCTGCTaGCCCAGCTCTGACCCTTTG +
Preference number: 5 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGQQWGC*PSSDPL
Trigger: CAAAGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTG...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp AGGTTGGGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGGGAACCCTTTTGGCCTaGGAGCGCATGGGCGGGTCG +
Preference number: 5 (lower is better)
Translates to: RLGFGSPRLELKPVTWIWGTLLA*ERMGGS
Trigger: CGACCCGCCCATGCGCTCCAAGGCCAAAAGGGTTCC...CCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000239036.2
CDS GCA 90 bp CGGAACTTTTCCAGGTCCCGGGACAACAAGTTAAACTGCTCACTCTaGACACGGCATTTCTCTTCCAGCTCTCGGACCTTGGACTGCATG +
Preference number: 5 (lower is better)
Translates to: RNFSRSRDNKLNCSL*TRHFSSSSRTLDCM
Trigger: CATGCAGTCCAAGGTCCGAGAGCTGGAAGAGAAATGCCGTGTGCAGAGTGAGCAGTTTAACTTGTTGTCCCGGGACCTGGAAAAGTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
CDS GCA 90 bp GTGTGTTGCCGGAACTTTTCCAGGTCCCGGGACAACAAGTTAAACTaGTCACTCTGCACACGGCATTTCTCTTCCAGCTCTCGGACCTTG +
Preference number: 5 (lower is better)
Translates to: VCCRNFSRSRDNKLN*SLCTRHFSSSSRTL
Trigger: CAAGGTCCGAGAGCTGGAAGAGAAATGCCGTGTGCAGAGTGAGCAGTTTAACTTGTTGTCCCGGGACCTGGAAAAGTTCCGGCAACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000199737.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 90 bp GTTAGAGTTCCGGTCATTGTCCATCTCGGACTCAAATCTGCATCTTaGGCTGCTGGATCGCAAGAGGAAGGAGGGCTTCACACACGGAGA +
Preference number: 5 (lower is better)
Translates to: VRVPVIVHLGLKSAS*AAGSQEEGGLHTRR
Trigger: TCTCCGTGTGTGAAGCCCTCCTTCCTCTTGCGATCCAGCAGCCCAAGATGCAGATTTGAGTCCGAGATGGACAATGACCGGAACTCTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS-3UTR CAA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCCCGAGCTGCTTTGCTaGGAGTTGTTAGAGTTCCGG +
Preference number: 5 (lower is better)
Translates to: GISLRCLRLLTYVTATCLPELLC*ELLEFR
Trigger: CCGGAACTCTAACAACTCCAAGCAAAGCAGCTCGGG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp TCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCTCAGGGGCTTCTGGGTTCTCATaGGGCCCATCGAAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SFGIKASDMDLEVSGGSGASGFS*GPSKGL
Trigger: CAACCCCTTCGATGGGCCCAATGAGAACCCAGAAGC...CCCTGAGCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCCGAGTCCACTTGAGTaGGGGAGTGAAGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: GISLRCLRLLTYVTATCLPSPLE*GSEGEG
Trigger: TCCTTCACCTTCACTCCCCAACTCAAGTGGACTCGG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACCGCACACTCACGGCCTaGGCCTCTAGGCTTCGCAGC +
Preference number: 5 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDRTLTA*ASRLRS
Trigger: GCTGCGAAGCCTAGAGGCCAAGGCCGTGAGTGTGCG...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp CCACTGTGCAGTTATAAGGCCAGAACATCAAGGCGAGTTAAACTAGGAATCTCACGCACACTCACGGCCTaGGCCTCTAGGCTTCGCAGC +
Preference number: 5 (lower is better)
Translates to: PLCSYKARTSRRVKLGISRTLTA*ASRLRS
Trigger: GCTGCGAAGCCTAGAGGCCAAGGCCGTGAGTGTGCG...TGAGATTCCTAGTTTAACTCGCCTTGATGTTCTGGCCTTATAACTGCACAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCCACTTGCTAATGGCTTaGGTGGGGGAGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: ESSFGIKASDMDLEVSGGHLLMA*VGEQSS
Trigger: CGAGGACTGCTCCCCCACCAAAGCCATTAGCAAGTG...GCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GAAGCCACTGTGTCAAGTGAGGATGAAGACCAGGAATGCACAACACATGCGAAGCACTTGCTAATGGCTTaGGTGGGGGAGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: EATVSSEDEDQECTTHAKHLLMA*VGEQSS
Trigger: CGAGGACTGCTCCCCCACCAAAGCCATTAGCAAGTG...CTTCGCATGTGTTGTGCATTCCTGGTCTTCATCCTCACTTGACACAGTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCAGGACTCATCCACTTaGACGTGGGGCCCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDQDSST*TWGPRC
Trigger: ACACCTGGGGCCCCACGTCAAAGTGGATGAGTCCTG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACCAGGACTCATCCACTTaGACGTGGGGCCCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYQDSST*TWGPRC
Trigger: ACACCTGGGGCCCCACGTCAAAGTGGATGAGTCCTG...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGCCCAGCTCTGACCCTTaGAGGAAGTCATCCACTGAG +
Preference number: 5 (lower is better)
Translates to: GISLRCLRLLTYVTATCLPSSDP*RKSSTE
Trigger: CTCAGTGGATGACTTCCTCAAAGGGTCAGAGCTGGG...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCAGCAGCGTCTGGGTTaGGGGACATGGTCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDQQRLG*GTWSVG
Trigger: ACCCACTGACCATGTCCCCAAACCCAGACGCTGCTG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GAGCAAAACTTGGCGAGTGAGACCAGGGCACTCAGCGGGCACACAATACAAGGCACTTCTTCCAGGAAATaGGAAGGCACGAGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: EQNLASETRALSGHTIQGTSSRK*EGTRPF
Trigger: AAAAGGCCTCGTGCCTTCCAATTTCCTGGAAGAAGT...GCCTTGTATTGTGTGCCCGCTGAGTGCCCTGGTCTCACTCGCCAAGTTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS GCA 90 bp CGGAACTTTTCCAGGTCCCGGGACAACAAGTTAAACTGCTCACTCTaGACACGGCATTTCTCTTCCAGCTCTCGGACCTTGGACTCTAAC +
Preference number: 5 (lower is better)
Translates to: RNFSRSRDNKLNCSL*TRHFSSSSRTLDSN
Trigger: GTTAGAGTCCAAGGTCCGAGAGCTGGAAGAGAAATGCCGTGTGCAGAGTGAGCAGTTTAACTTGTTGTCCCGGGACCTGGAAAAGTTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000199537.5
ENSMUST00000199737.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 90 bp GAGCTCCTCAGCACCAGGGTCAGTTTCGGACTCATCATAGAAGTCTaGAGAAAGATGGTCTCGCCCGGTGTATTCATCAATGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: ELLSTRVSFGLIIEV*RKMVSPGVFINGWS
Trigger: GCTCCATCCATTGATGAATACACCGGGCGAGACCATCTTTCTCCAGACTTCTATGATGAGTCCGAAACTGACCCTGGTGCTGAGGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS-3UTR CAA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTCCCGAGCTGCTTTGCTaGGAGTTGTTAGAGTTCCGG +
Preference number: 5 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSPELLC*ELLEFR
Trigger: CCGGAACTCTAACAACTCCAAGCAAAGCAGCTCGGG...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GGGTCAAGGTTGGGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGCCCGAGCTGCTTTGCTaGGAGTTGTTAGAGTTCCGG +
Preference number: 5 (lower is better)
Translates to: GSRLGFGSPRLELKPVTWPELLC*ELLEFR
Trigger: CCGGAACTCTAACAACTCCAAGCAAAGCAGCTCGGG...CCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCTTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACGCTTCTGGGTTCTCATaGGGCCCATCGAAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYASGFS*GPSKGL
Trigger: CAACCCCTTCGATGGGCCCAATGAGAACCCAGAAGC...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTCCGAGTCCACTTGAGTaGGGGAGTGAAGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSPSPLE*GSEGEG
Trigger: TCCTTCACCTTCACTCCCCAACTCAAGTGGACTCGG...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCCCGAGTCCACTTGAGTaGGGGAGTGAAGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: ESSFGIKASDMDLEVSGGPSPLE*GSEGEG
Trigger: TCCTTCACCTTCACTCCCCAACTCAAGTGGACTCGG...GCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp TCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCTCAGGGCCGAGTCCACTTGAGTaGGGGAGTGAAGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: SFGIKASDMDLEVSGGSGPSPLE*GSEGEG
Trigger: TCCTTCACCTTCACTCCCCAACTCAAGTGGACTCGG...CCCTGAGCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AAGGGGGTGGAATTTGATTCAGGAACACTGTGTGCCAATTTCACTTCATTCTGCGCCACCACCACATCCTaGCCCACCAGCAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: KGVEFDSGTLCANFTSFCATTTS*PTSRVH
Trigger: GTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGC...GCAGAATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAAATTCCACCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGGCCACCCTCTGCCCTTaGGCGTACACGCCGTATCCT +
Preference number: 5 (lower is better)
Translates to: ETIHFTMNLVARQLKPGEATLCP*AYTPYP
Trigger: AGGATACGGCGTGTACGCCAAAGGGCAGAGGGTGGC...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACCACTTGCTAATGGCTTaGGTGGGGGAGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYHLLMA*VGEQSS
Trigger: CGAGGACTGCTCCCCCACCAAAGCCATTAGCAAGTG...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGTCACGGGCCATGGCCTaGGCGACAGTGGTAGACACG +
Preference number: 5 (lower is better)
Translates to: ETIHFTMNLVARQLKPGESRAMA*ATVVDT
Trigger: CGTGTCTACCACTGTCGCCAAGGCCATGGCCCGTGA...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACTCACGGGCCATGGCCTaGGCGACAGTGGTAGACACG +
Preference number: 5 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDSRAMA*ATVVDT
Trigger: CGTGTCTACCACTGTCGCCAAGGCCATGGCCCGTGA...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCCCCAGCTCTGACCCTTaGAGGAAGTCATCCACTGAG +
Preference number: 5 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGPSSDP*RKSSTE
Trigger: CTCAGTGGATGACTTCCTCAAAGGGTCAGAGCTGGG...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GCCCCCAAGCTTGCTTGGATTGAAAATCAAGGTCTAACTCTAATGGAGAACACCCAGCAGCGTCTGGGTTaGGGGACATGGTCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: APKLAWIENQGLTLMENTQQRLG*GTWSVG
Trigger: ACCCACTGACCATGTCCCCAAACCCAGACGCTGCTG...GGTGTTCTCCATTAGAGTTAGACCTTGATTTTCAATCCAAGCAAGCTTGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp TTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGGATGGAGCTCTCCTaGCTGTCCCTGAACCCTCGG +
Preference number: 5 (lower is better)
Translates to: FWESSFGIKASDMDLEVSGMELS*LSLNPR
Trigger: CCGAGGGTTCAGGGACAGCAAGGAGAGCTCCATCCC...GGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239036.2
CDS-3UTR CAA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTTCCCCGAGCTGCTTaGCTTGGAGTTGTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: VGISLRCLRLLTYVTATCLPRAA*LGVVRV
Trigger: AACTCTAACAACTCCAAGCAAAGCAGCTCGGGGAAG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCAGGGCACCAAGCCCCTTaGCCCATCCAGAAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: VHAGALLCKQTALRNMFPGHQAP*PIQKLS
Trigger: GGAGAGCTTCTGGATGGGCAAAGGGGCTTGGTGCCC...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGAGGCGCCAGCCGCGACTCATaGTCCTGGATAAAATCCACA +
Preference number: 5 (lower is better)
Translates to: ESSFGIKASDMDLEVSGGASRDS*SWIKST
Trigger: TGTGGATTTTATCCAGGACAATGAGTCGCGGCTGGC...GCCTCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCGCCAGCCGCGACTCATaGTCCTGGATAAAATCCACA +
Preference number: 5 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGASRDS*SWIKST
Trigger: TGTGGATTTTATCCAGGACAATGAGTCGCGGCTGGC...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCCGAGTCCACTTGAGTaGGGGAGTGAAGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDPSPLE*GSEGEG
Trigger: TCCTTCACCTTCACTCCCCAACTCAAGTGGACTCGG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCAGCCACCACCACATCCTaGCCCACCAGCAGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: VHAGALLCKQTALRNMFPATTTS*PTSRVH
Trigger: GTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGC...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACGTGGACAGTGACATCTaGTGGTGGGGCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDVDSDI*WWGWRS
Trigger: GGACCTCCAGCCCCACCACAAGATGTCACTGTCCAC...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AAGGGGGTGGAATTTGATTCAGGAACACTGTGTGCCAATTTCACTTCATTCTGCGTGGACAGTGACATCTaGTGGTGGGGCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: KGVEFDSGTLCANFTSFCVDSDI*WWGWRS
Trigger: GGACCTCCAGCCCCACCACAAGATGTCACTGTCCAC...GCAGAATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAAATTCCACCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GGGTCAAGGTTGGGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGGTGACATTTGCTCCATaGGACAACCCAGTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: GSRLGFGSPRLELKPVTWVTFAP*DNPVGV
Trigger: GACTCCCACTGGGTTGTCCAATGGAGCAAATGTCAC...CCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCTTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCGTGACATTTGCTCCATaGGACAACCCAGTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGVTFAP*DNPVGV
Trigger: GACTCCCACTGGGTTGTCCAATGGAGCAAATGTCAC...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGCAGGACTCATCCACTTaGACGTGGGGCCCCAGGTGT +
Preference number: 5 (lower is better)
Translates to: ETIHFTMNLVARQLKPGEQDSST*TWGPRC
Trigger: ACACCTGGGGCCCCACGTCAAAGTGGATGAGTCCTG...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTTTTCTCTAACCTGTaGCTCTCAGCCACCCTCTGT +
Preference number: 5 (lower is better)
Translates to: VGISLRCLRLLTYVTATCLFSNL*LSATLC
Trigger: ACAGAGGGTGGCTGAGAGCAACAGGTTAGAGAAAAG...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp ACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACCAACAGTGGGGCTGCTaGCCCAGCTCTGACCCTTTG +
Preference number: 5 (lower is better)
Translates to: TALRNMFPRLAFPVFSTDQQWGC*PSSDPL
Trigger: CAAAGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTG...GTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GGGTCAAGGTTGGGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGAGGCACGAGGCCTTTTaGCCCATTCAGCTCTCCATA +
Preference number: 5 (lower is better)
Translates to: GSRLGFGSPRLELKPVTWRHEAF*PIQLSI
Trigger: TATGGAGAGCTGAATGGGCAAAAAGGCCTCGTGCCT...CCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACCCAACCTTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCAGGCACGAGGCCTTTTaGCCCATTCAGCTCTCCATA +
Preference number: 5 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGRHEAF*PIQLSI
Trigger: TATGGAGAGCTGAATGGGCAAAAAGGCCTCGTGCCT...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp TGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCGGACACTGCGGCCAGCCTTaGCAGCAATTTCTTGCCTCT +
Preference number: 5 (lower is better)
Translates to: WESSFGIKASDMDLEVSGHCGQP*QQFLAS
Trigger: AGAGGCAAGAAATTGCTGCAAAGGCTGGCCGCAGTG...TCCGGACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239036.2
CDS-3UTR CAA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGTGGATCTCCTGCTGCTaGGCATTGAGGAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ETIHFTMNLVARQLKPGEWISCC*ALRKAR
Trigger: CCTGGCCTTCCTCAATGCCAAGCAGCAGGAGATCCA...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGGCTTCTGGGTTCTCATaGGGCCCATCGAAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: ETIHFTMNLVARQLKPGEASGFS*GPSKGL
Trigger: CAACCCCTTCGATGGGCCCAATGAGAACCCAGAAGC...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCCCTGAGGTTGAAGAATaGGTACTTGTACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGPEVEE*VLVPGC
Trigger: GCAGCCAGGTACAAGTACCAATTCTTCAACCTCAGG...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACGTGACATTTGCTCCATaGGACAACCCAGTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYVTFAP*DNPVGV
Trigger: GACTCCCACTGGGTTGTCCAATGGAGCAAATGTCAC...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GAGACGATTCATTTCACTATGAATCTAGTTGCCAGGCAACTGAAACCAGGTGAGCACTTGCTAATGGCTTaGGTGGGGGAGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: ETIHFTMNLVARQLKPGEHLLMA*VGEQSS
Trigger: CGAGGACTGCTCCCCCACCAAAGCCATTAGCAAGTG...CTCACCTGGTTTCAGTTGCCTGGCAACTAGATTCATAGTGAAATGAATCGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTCTTTTCTCTAACCTGTaGCTCTCAGCCACCCTCTGT +
Preference number: 5 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSLFSNL*LSATLC
Trigger: ACAGAGGGTGGCTGAGAGCAACAGGTTAGAGAAAAG...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp TTGATTCAGGAACACTGTGTGCCAATTTCACTTCATTCTGCAGCTAGGCACACGCCCAGCTCTGACCCTTaGAGGAAGTCATCCACTGAG +
Preference number: 5 (lower is better)
Translates to: LIQEHCVPISLHSAARHTPSSDP*RKSSTE
Trigger: CTCAGTGGATGACTTCCTCAAAGGGTCAGAGCTGGG...CGTGTGCCTAGCTGCAGAATGAAGTGAAATTGGCACACAGTGTTCCTGAATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GTACACGCTGGCGCACTCTTGTGTAAACAAACAGCTTTAAGAAATATGTTCCCACAGCAGCGTCTGGGTTaGGGGACATGGTCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: VHAGALLCKQTALRNMFPQQRLG*GTWSVG
Trigger: ACCCACTGACCATGTCCCCAAACCCAGACGCTGCTG...TGGGAACATATTTCTTAAAGCTGTTTGTTTACACAAGAGTGCGCCAGCGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACAGGCACGAGGCCTTTTaGCCCATTCAGCTCTCCATA +
Preference number: 5 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDRHEAF*PIQLSI
Trigger: TATGGAGAGCTGAATGGGCAAAAAGGCCTCGTGCCT...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCACTTCTTCCAGGAAATaGGAAGGCACGAGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: VGISLRCLRLLTYVTATCTSSRK*EGTRPF
Trigger: AAAAGGCCTCGTGCCTTCCAATTTCCTGGAAGAAGT...GCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACCTTCCCCGAGCTGCTTaGCTTGGAGTTGTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYLPRAA*LGVVRV
Trigger: AACTCTAACAACTCCAAGCAAAGCAGCTCGGGGAAG...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACCCTGAGGTTGAAGAATaGGTACTTGTACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDPEVEE*VLVPGC
Trigger: GCAGCCAGGTACAAGTACCAATTCTTCAACCTCAGG...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACCTTTTCTCTAACCTGTaGCTCTCAGCCACCCTCTGT +
Preference number: 5 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYLFSNL*LSATLC
Trigger: ACAGAGGGTGGCTGAGAGCAACAGGTTAGAGAAAAG...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTCAGCAGCGTCTGGGTTaGGGGACATGGTCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFQQRLG*GTWSVG
Trigger: ACCCACTGACCATGTCCCCAAACCCAGACGCTGCTG...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCACTTCTTCCAGGAAATaGGAAGGCACGAGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: SLSRYLSKVSSVAHLRDGTSSRK*EGTRPF
Trigger: AAAAGGCCTCGTGCCTTCCAATTTCCTGGAAGAAGT...GCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAGGCTGGCTTACCCTTTaGGCCTTGGAGCGCATGGGC +
Preference number: 5 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSGWLTL*ALERMG
Trigger: GCCCATGCGCTCCAAGGCCAAAAGGGTAAGCCAGCC...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTTGGATCTCCTGCTGCTaGGCATTGAGGAAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFWISCC*ALRKAR
Trigger: CCTGGCCTTCCTCAATGCCAAGCAGCAGGAGATCCA...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCATCCAGCTCTCGGACCTaGGACTGCATGCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSSSSRT*DCMQSR
Trigger: CCTGGACTGCATGCAGTCCAAGGTCCGAGAGCTGGA...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
CDS-3UTR CAA 90 bp TTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATAAAATCCACAAAGTaGGAGGGCACCAAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: LSRYLSKVSSVAHLRDGYIKSTK*EGTKPL
Trigger: AAGGGGCTTGGTGCCCTCCAACTTTGTGGATTTTAT...GTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp CCACTGTGCAGTTATAAGGCCAGAACATCAAGGCGAGTTAAACTAGGAATCTCAAGGCACGAGGCCTTTTaGCCCATTCAGCTCTCCATA +
Preference number: 5 (lower is better)
Translates to: PLCSYKARTSRRVKLGISRHEAF*PIQLSI
Trigger: TATGGAGAGCTGAATGGGCAAAAAGGCCTCGTGCCT...TGAGATTCCTAGTTTAACTCGCCTTGATGTTCTGGCCTTATAACTGCACAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACACTTCTTCCAGGAAATaGGAAGGCACGAGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDTSSRK*EGTRPF
Trigger: AAAAGGCCTCGTGCCTTCCAATTTCCTGGAAGAAGT...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS GCA 90 bp GGCCATATTAGGCCTGAGGTTGAAGAATTGGTACTTGTACCTGGCTaGCTTCACGATGTCCAGTTCTTCTTCGTTGAGGAAGATGATATG +
Preference number: 5 (lower is better)
Translates to: GHIRPEVEELVLVPG*LHDVQFFFVEEDDM
Trigger: CATATCATCTTCCTCAACGAAGAAGAACTGGACATCGTGAAGGCAGCCAGGTACAAGTACCAATTCTTCAACCTCAGGCCTAATATGGCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS-3UTR CAA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTCCCGAGCTGCTTTGCTaGGAGTTGTTAGAGTTCCGG +
Preference number: 5 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFPELLC*ELLEFR
Trigger: CCGGAACTCTAACAACTCCAAGCAAAGCAGCTCGGG...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GGTTTTGGGAGTCCTCGTTTGGAATTAAAGCCAGTGACATGGATTTGGAAGTGTCCTGAGGTTGAAGAATaGGTACTTGTACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GFGSPRLELKPVTWIWKCPEVEE*VLVPGC
Trigger: GCAGCCAGGTACAAGTACCAATTCTTCAACCTCAGG...ACACTTCCAAATCCATGTCACTGGCTTTAATTCCAAACGAGGACTCCCAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACGGCTACATGCCTGATATTAGGCCTGAGGTaGAAGAATTGGTACTTGTAC +
Preference number: 5 (lower is better)
Translates to: GISLRCLRLLTYVTATCLILGLR*KNWYLY
Trigger: GTACAAGTACCAATTCTTCAACCTCAGGCCTAATAT...CAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGAGTGACATTTGCTCCATaGGACAACCCAGTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGVTFAP*DNPVGV
Trigger: GACTCCCACTGGGTTGTCCAATGGAGCAAATGTCAC...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACCTGAGGTTGAAGAATaGGTACTTGTACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: NSFKKYVPKVGLSRILNGPEVEE*VLVPGC
Trigger: GCAGCCAGGTACAAGTACCAATTCTTCAACCTCAGG...TCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GTAGCTAACAATGCAATAGGCAACTCTCCTTGTGAGTACACGCTGGCGCACTCTATATTAGGCCTGAGGTaGAAGAATTGGTACTTGTAC +
Preference number: 5 (lower is better)
Translates to: VANNAIGNSPCEYTLAHSILGLR*KNWYLY
Trigger: GTACAAGTACCAATTCTTCAACCTCAGGCCTAATAT...AGAGTGCGCCAGCGTGTACTCACAAGGAGAGTTGCCTATTGCATTGTTAGCTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAGCCAGCCGCGACTCATaGTCCTGGATAAAATCCACA +
Preference number: 5 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSASRDS*SWIKST
Trigger: TGTGGATTTTATCCAGGACAATGAGTCGCGGCTGGC...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp GGTAGCTTAAGTCGGTATCTCTCTAAGGTGTCTTCGGTTGCTCACTTACGTGACATATTAGGCCTGAGGTaGAAGAATTGGTACTTGTAC +
Preference number: 5 (lower is better)
Translates to: GSLSRYLSKVSSVAHLRDILGLR*KNWYLY
Trigger: GTACAAGTACCAATTCTTCAACCTCAGGCCTAATAT...GTCACGTAAGTGAGCAACCGAAGACACCTTAGAGAGATACCGACTTAAGCTACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS-3UTR CAA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAAGGCACGAGGCCTTTTaGCCCATTCAGCTCTCCATA +
Preference number: 5 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSRHEAF*PIQLSI
Trigger: TATGGAGAGCTGAATGGGCAAAAAGGCCTCGTGCCT...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp TTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAACGGACACATTTATAAAATCCACAAAGTaGGAGGGCACCAAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: LRNMFPRLAFPVFSTDTFIKSTK*EGTKPL
Trigger: AAGGGGCTTGGTGCCCTCCAACTTTGTGGATTTTAT...AAATGTGTCCGTTGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCACCTGAGGTTGAAGAATaGGTACTTGTACCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSPEVEE*VLVPGC
Trigger: GCAGCCAGGTACAAGTACCAATTCTTCAACCTCAGG...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS-3UTR CAA 90 bp AAACAAACAGCTTTAAGAAATATGTTCCCAAGGTTGGCCTTTCCCGTATTCTCAATATTAGGCCTGAGGTaGAAGAATTGGTACTTGTAC +
Preference number: 5 (lower is better)
Translates to: KQTALRNMFPRLAFPVFSILGLR*KNWYLY
Trigger: GTACAAGTACCAATTCTTCAACCTCAGGCCTAATAT...TGAGAATACGGGAAAGGCCAACCTTGGGAACATATTTCTTAAAGCTGTTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
CDS GCA 72 bp GCTTCGCAGCCGGATCAGCTCCACTGCCGTGCCATCTaGCGTGGGGGCGATGACCTCAGCCACCCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: ASQPDQLHCRAI*RGGDDLSHPLP
Trigger: GGGCAGAGGGTGGCTGAGGTCATCGCCCCCACGGCAGATGGCACGGCAGTGGAGCTGATCCGGCTGCGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp CTTCGTGGTCGCTGGCCTCGTCCCAGCCATCCCTCCTaGGCATGGGCCTCTCCGGGCTGGGCTGGGTGTCAT +
Preference number: 6 (lower is better)
Translates to: LRGRWPRPSHPS*AWASPGWAGCH
Trigger: ATGACACCCAGCCCAGCCCGGAGAGGCCCATGCCCAGGAGGGATGGCTGGGACGAGGCCAGCGACCACGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS CCA 72 bp ACACGGGGGCTCCTTGTGGCTGAGGAAGGATCCGGCTaGGCGAGGGTGACCTTCTGCCTGGGCCAGCGCTGT +
Preference number: 6 (lower is better)
Translates to: TRGLLVAEEGSG*ARVTFCLGQRC
Trigger: ACAGCGCTGGCCCAGGCAGAAGGTCACCCTCGCCCAGCCGGATCCTTCCTCAGCCACAAGGAGCCCCCGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp GATGTCCCCAACAGGACCGCGCTGGCCCACGCTCCATaGCCAACAAGGCCCTGGCTCTGGAGGACCCCATGC +
Preference number: 6 (lower is better)
Translates to: DVPNRTALAHAP*PTRPWLWRTPC
Trigger: GCATGGGGTCCTCCAGAGCCAGGGCCTTGTTGGCCATGGAGCGTGGGCCAGCGCGGTCCTGTTGGGGACATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS TCA 72 bp CCTGAACAGAGGCGGCTGTGGCCCCAGCGTGGACAGTaGCATCTTGTGGTGGGGCTGGAGGTCCTGCAGGCA +
Preference number: 6 (lower is better)
Translates to: PEQRRLWPQRGQ*HLVVGLEVLQA
Trigger: TGCCTGCAGGACCTCCAGCCCCACCACAAGATGTCACTGTCCACGCTGGGGCCACAGCCGCCTCTGTTCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp AACATGTGGCCATGTGCAGGGCCCGGTGACCGGCTCTaGTCCCAGGACTCATCCACTTTGACGTGGGGCCCC +
Preference number: 6 (lower is better)
Translates to: NMWPCAGPGDRL*SQDSSTLTWGP
Trigger: GGGGCCCCACGTCAAAGTGGATGAGTCCTGGGAGCAGAGCCGGTCACCGGGCCCTGCACATGGCCACATGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp GTACCGCTGGGCCGACGGCGGCCCCCATCCTCCAGCTaGATCTCTGAGTATAGCTCCTCCTCATCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: VPLGRRRPPSSS*ISEYSSSSSSS
Trigger: GGAGGAGGATGAGGAGGAGCTATACTCAGAGATGCAGCTGGAGGATGGGGGCCGCCGTCGGCCCAGCGGTAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp TCAGCCACCCTCTGTGCAGCTTCACGGGCCATGGCCTaGGCGACAGTGGTAGACACGGGGGCTCCTTGTGGC +
Preference number: 6 (lower is better)
Translates to: SATLCAASRAMA*ATVVDTGAPCG
Trigger: GCCACAAGGAGCCCCCGTGTCTACCACTGTCGCCAAGGCCATGGCCCGTGAAGCTGCACAGAGGGTGGCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS TCA 72 bp GAGTGCACTGCAGCTCGTCTGAGTTTCCCCGGCTCGTaGCGCACTGCACGGAGATGCGGTAGGTGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: ECTAARLSFPGS*RTARRCGRCRQ
Trigger: CTGCCTGCACCTACCGCATCTCCGTGCAGTGCGTCACGAGCCGGGGAAACTCAGACGAGCTGCAGTGCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS TCA 72 bp AAGCTCCTAGCCTTATGGCATTCCTTGAGGGCGTTGTaGGAGGTACCGCTGGGCCGACGGCGGCCCCCATCC +
Preference number: 6 (lower is better)
Translates to: KLLALWHSLRAL*EVPLGRRRPPS
Trigger: GGATGGGGGCCGCCGTCGGCCCAGCGGTACCTCTCACAACGCCCTCAAGGAATGCCATAAGGCTAGGAGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS GCA 72 bp GCCACCACCACATCCTTGCCCACCAGCAGAGTGCACTaGAGCTCGTCTGAGTTTCCCCGGCTCGTGACGCAC +
Preference number: 6 (lower is better)
Translates to: ATTTSLPTSRVH*SSSEFPRLVTH
Trigger: GTGCGTCACGAGCCGGGGAAACTCAGACGAGCTGCAGTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp CCACACGCAGCTGGGACGGTGCCACCACCACATCCTTaGCCACCAGCAGAGTGCACTGCAGCTCGTCTGAGT +
Preference number: 6 (lower is better)
Translates to: PHAAGTVPPPHP*PPAECTAARLS
Trigger: ACTCAGACGAGCTGCAGTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGCACCGTCCCAGCTGCGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp TCCACACGCAGCTGGGACGGTGCCACCACCACATCCTaGCCCACCAGCAGAGTGCACTGCAGCTCGTCTGAG +
Preference number: 6 (lower is better)
Translates to: STRSWDGATTTS*PTSRVHCSSSE
Trigger: CTCAGACGAGCTGCAGTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 90 bp GTGATGTTGTCCACACGCAGCTGGGACGGTGCCACCACCACATCCTaGCCCACCAGCAGAGTGCACTGCAGCTCGTCTGAGTTTCCCCGG +
Preference number: 6 (lower is better)
Translates to: VMLSTRSWDGATTTS*PTSRVHCSSSEFPR
Trigger: CCGGGGAAACTCAGACGAGCTGCAGTGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGACAACATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 90 bp CTGTTGGTCGGCAGCCACGAGAGCTGGGCAGAGATCTGTGTGATGTaGTCCACACGCAGCTGGGACGGTGCCACCACCACATCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: LLVGSHESWAEICVM*STRSWDGATTTSLP
Trigger: GGGCAAGGATGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGACAACATCACACAGATCTCTGCCCAGCTCTCGTGGCTGCCGACCAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS TCA 72 bp TGGTCGGCAGCCACGAGAGCTGGGCAGAGATCTGTGTaGTGTTGTCCACACGCAGCTGGGACGGTGCCACCA +
Preference number: 6 (lower is better)
Translates to: WSAATRAGQRSV*CCPHAAGTVPP
Trigger: TGGTGGCACCGTCCCAGCTGCGTGTGGACAACATCACACAGATCTCTGCCCAGCTCTCGTGGCTGCCGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp GACCCCCGGCTGCTCTCTGTGTGGTACTCATCTCCATaGCAACAGTGGGGCTGCTTGCCCAGCTCTGACCCT +
Preference number: 6 (lower is better)
Translates to: DPRLLSVWYSSP*QQWGCLPSSDP
Trigger: AGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTGCCATGGAGATGAGTACCACACAGAGAGCAGCCGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp GGCAGCCACGAGAGCTGGGCAGAGATCTGTGTGATGTaGTCCACACGCAGCTGGGACGGTGCCACCACCACA +
Preference number: 6 (lower is better)
Translates to: GSHESWAEICVM*STRSWDGATTT
Trigger: TGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGACAACATCACACAGATCTCTGCCCAGCTCTCGTGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp GCCGTGGGGGCGATGACCTCAGCCACCCTCTGCCCTTaGGCGTACACGCCGTATCCTGTGACATTTGCTCCA +
Preference number: 6 (lower is better)
Translates to: AVGAMTSATLCP*AYTPYPVTFAP
Trigger: TGGAGCAAATGTCACAGGATACGGCGTGTACGCCAAAGGGCAGAGGGTGGCTGAGGTCATCGCCCCCACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS TCA 72 bp ATCCTTGCCCACCAGCAGAGTGCACTGCAGCTCGTCTaGGTTTCCCCGGCTCGTGACGCACTGCACGGAGAT +
Preference number: 6 (lower is better)
Translates to: ILAHQQSALQLV*VSPARDALHGD
Trigger: ATCTCCGTGCAGTGCGTCACGAGCCGGGGAAACTCAGACGAGCTGCAGTGCACTCTGCTGGTGGGCAAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS TCA 72 bp CCGGTGACCGGCTCTGCTCCCAGGACTCATCCACTTTaGCGTGGGGCCCCAGGTGTTGGTCTTTGGTATCCA +
Preference number: 6 (lower is better)
Translates to: PVTGSAPRTHPL*RGAPGVGLWYP
Trigger: TGGATACCAAAGACCAACACCTGGGGCCCCACGTCAAAGTGGATGAGTCCTGGGAGCAGAGCCGGTCACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS TCA 72 bp AGGTGGTTCCAACATGTGGCCATGTGCAGGGCCCGGTaGCCGGCTCTGCTCCCAGGACTCATCCACTTTGAC +
Preference number: 6 (lower is better)
Translates to: RWFQHVAMCRAR*PALLPGLIHFD
Trigger: GTCAAAGTGGATGAGTCCTGGGAGCAGAGCCGGTCACCGGGCCCTGCACATGGCCACATGTTGGAACCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp GGGATACTGAACAGTCTCTTACTGCGGTGGGGCTGTTaGGGGAACTCGGGCTGCTCCAGGAAAGCGCCTTCC +
Preference number: 6 (lower is better)
Translates to: GILNSLLLRWGC*GNSGCSRKAPS
Trigger: GGAAGGCGCTTTCCTGGAGCAGCCCGAGTTCCCCCAACAGCCCCACCGCAGTAAGAGACTGTTCAGTATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS CAA 72 bp GATCTCCTGCTGCTTGGCATTGAGGAAGGCCAGGGCTaGCTCATGCTCCAACTCCAGCTGTTGCCGCCGCTC +
Preference number: 6 (lower is better)
Translates to: DLLLLGIEEGQG*LMLQLQLLPPL
Trigger: GAGCGGCGGCAACAGCTGGAGTTGGAGCATGAGCAAGCCCTGGCCTTCCTCAATGCCAAGCAGCAGGAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000199737.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp TCTCCCTGTACAGACAGGGTACGCACACTCACGGCCTaGGCCTCTAGGCTTCGCAGCCGGATCAGCTCCACT +
Preference number: 6 (lower is better)
Translates to: SPCTDRVRTLTA*ASRLRSRISST
Trigger: AGTGGAGCTGATCCGGCTGCGAAGCCTAGAGGCCAAGGCCGTGAGTGTGCGTACCCTGTCTGTACAGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp CCGAATGGAGATGGGCTGTGGGGGATGGAGCTCTCCTaGCTGTCCCTGAACCCTCGGGAGGAACCCTTTTGG +
Preference number: 6 (lower is better)
Translates to: PNGDGLWGMELS*LSLNPREEPFW
Trigger: CCAAAAGGGTTCCTCCCGAGGGTTCAGGGACAGCAAGGAGAGCTCCATCCCCCACAGCCCATCTCCATTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000239036.2
CDS CAA 90 bp TGTGCAGGGCCCGGTGACCGGCTCTGCTCCCAGGACTCATCCACTTaGACGTGGGGCCCCAGGTGTTGGTCTTTGGTATCCATGTCACTT +
Preference number: 6 (lower is better)
Translates to: CAGPGDRLCSQDSST*TWGPRCWSLVSMSL
Trigger: AAGTGACATGGATACCAAAGACCAACACCTGGGGCCCCACGTCAAAGTGGATGAGTCCTGGGAGCAGAGCCGGTCACCGGGCCCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS TCA 72 bp ATCAACGTGGAGTTTCCTAAAATCTTGAGGGCGTTGTaGGAGGTACCGCTGGGCCGACGGCGGCCCCCATCC +
Preference number: 6 (lower is better)
Translates to: INVEFPKILRAL*EVPLGRRRPPS
Trigger: GGATGGGGGCCGCCGTCGGCCCAGCGGTACCTCTCACAACGCCCTCAAGATTTTAGGAAACTCCACGTTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS TCA 72 bp CCAAACCACTGTCCGGGCTCCTGGTGGCCGAGCGGCTaGACCGACAGCCTCTGTCTTCCAGAAAGATATCCT +
Preference number: 6 (lower is better)
Translates to: PNHCPGSWWPSG*TDSLCLPERYP
Trigger: AGGATATCTTTCTGGAAGACAGAGGCTGTCGGTTCAGCCGCTCGGCCACCAGGAGCCCGGACAGTGGTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS GCA 72 bp TCATGCGTGTCTCTTTGTCCACCAGCACATTATAACTaGTCACGGTGCCCCAGCCGGGAGGCACAGCAGGGG +
Preference number: 6 (lower is better)
Translates to: SCVSLCPPAHYN*SRCPSREAQQG
Trigger: CCCCTGCTGTGCCTCCCGGCTGGGGCACCGTGAGCAGTTATAATGTGCTGGTGGACAAAGAGACACGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp GATCTGTGTGATGTTGTCCACACGCAGCTGGGACGGTaGCACCACCACATCCTTGCCCACCAGCAGAGTGCA +
Preference number: 6 (lower is better)
Translates to: DLCDVVHTQLGR*HHHILAHQQSA
Trigger: TGCACTCTGCTGGTGGGCAAGGATGTGGTGGTGGCACCGTCCCAGCTGCGTGTGGACAACATCACACAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp GTGTCATCGCTCCTGATGACGTCACTGGGGTCCACCTaGTCCCCAAAGTCCTCTTCGATGCTGCTCTGTCGG +
Preference number: 6 (lower is better)
Translates to: VSSLLMTSLGST*SPKSSSMLLCR
Trigger: CCGACAGAGCAGCATCGAAGAGGACTTTGGGGAGCAGGTGGACCCCAGTGACGTCATCAGGAGCGATGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS CCA 72 bp CGCTCCAGACTGATGCCAGAGTGGTTGAGAAAGTTCTaGTCCTGCTCACTCCCCAGAGTACCAGCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: RSRLMPEWLRKF*SCSLPRVPASR
Trigger: GCGGCTGGCTGGTACTCTGGGGAGTGAGCAGGACCAGAACTTTCTCAACCACTCTGGCATCAGTCTGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp CCTCGGGGGAGGCGTAGCCGTCCTCCTCGTCCGAGTTaGTATATTGCCCCGCACTGCTTTGCTCTAGAAAGA +
Preference number: 6 (lower is better)
Translates to: PRGRRSRPPRPS*YIAPHCFALER
Trigger: TCTTTCTAGAGCAAAGCAGTGCGGGGCAATATACCAACTCGGACGAGGAGGACGGCTACGCCTCCCCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp ATGTCCGACAGGTCTGACCCCCGGCTGCTCTCTGTGTaGTACTCATCTCCATGGCAACAGTGGGGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: MSDRSDPRLLSV*YSSPWQQWGCL
Trigger: CAAGCAGCCCCACTGTTGCCATGGAGATGAGTACCACACAGAGAGCAGCCGGGGGTCAGACCTGTCGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp GCTACCTCGGGGATACTGAACAGTCTCTTACTGCGGTaGGGCTGTTGGGGGAACTCGGGCTGCTCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: ATSGILNSLLLR*GCWGNSGCSRK
Trigger: TTTCCTGGAGCAGCCCGAGTTCCCCCAACAGCCCCACCGCAGTAAGAGACTGTTCAGTATCCCCGAGGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS CAA 90 bp CTCTGCCCTTTGGCGTACACGCCGTATCCTGTGACATTTGCTCCATaGGACAACCCAGTGGGAGTCAGTGCAGGGGGCTTCCAGGAGACC +
Preference number: 6 (lower is better)
Translates to: LCPLAYTPYPVTFAP*DNPVGVSAGGFQET
Trigger: GGTCTCCTGGAAGCCCCCTGCACTGACTCCCACTGGGTTGTCCAATGGAGCAAATGTCACAGGATACGGCGTGTACGCCAAAGGGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 90 bp TCATCTCCATGGCAACAGTGGGGCTGCTTGCCCAGCTCTGACCCTTaGAGGAAGTCATCCACTGAGGTGCCTCTCCTCTTGACCTCGGGG +
Preference number: 6 (lower is better)
Translates to: SSPWQQWGCLPSSDP*RKSSTEVPLLLTSG
Trigger: CCCCGAGGTCAAGAGGAGAGGCACCTCAGTGGATGACTTCCTCAAAGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTGCCATGGAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS TCA 72 bp CTGCTCGTCCCATCAACGTGGAGTTTCCTAAAATCTTaGGGGCGTTGTGAGAGGTACCGCTGGGCCGACGGC +
Preference number: 6 (lower is better)
Translates to: LLVPSTWSFLKS*GRCERYRWADG
Trigger: GCCGTCGGCCCAGCGGTACCTCTCACAACGCCCTCAAGATTTTAGGAAACTCCACGTTGATGGGACGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
CDS TCA 72 bp CATCCGCATGGATCTCAGAGACCATGTTACAGGGAATaGGGCCGAGCCTGGCACAGGTCTCCCCACGGTAGA +
Preference number: 6 (lower is better)
Translates to: HPHGSQRPCYRE*GRAWHRSPHGR
Trigger: TCTACCGTGGGGAGACCTGTGCCAGGCTCGGCCTCATTCCCTGTAACATGGTCTCTGAGATCCATGCGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp AGGTGGCTAGTCCATTCATGTACTGAGGGAAAGGCTTaGCAGGGGCCAAGGGAACATCCAGCAGGGCCACTG +
Preference number: 6 (lower is better)
Translates to: RWLVHSCTEGKA*QGPREHPAGPL
Trigger: CAGTGGCCCTGCTGGATGTTCCCTTGGCCCCTGGCAAGCCTTTCCCTCAGTACATGAATGGACTAGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp GACCGGCTCTGCTCCCAGGACTCATCCACTTTGACGTaGGGCCCCAGGTGTTGGTCTTTGGTATCCATGTCA +
Preference number: 6 (lower is better)
Translates to: DRLCSQDSSTLT*GPRCWSLVSMS
Trigger: TGACATGGATACCAAAGACCAACACCTGGGGCCCCACGTCAAAGTGGATGAGTCCTGGGAGCAGAGCCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 90 bp CTGCTCTCTGTGTGGTACTCATCTCCATGGCAACAGTGGGGCTGCTaGCCCAGCTCTGACCCTTTGAGGAAGTCATCCACTGAGGTGCCT +
Preference number: 6 (lower is better)
Translates to: LLSVWYSSPWQQWGC*PSSDPLRKSSTEVP
Trigger: AGGCACCTCAGTGGATGACTTCCTCAAAGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTGCCATGGAGATGAGTACCACACAGAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS TCA 72 bp CCACCCTCTGCCCTTTGGCGTACACGCCGTATCCTGTaGCATTTGCTCCATTGGACAACCCAGTGGGAGTCA +
Preference number: 6 (lower is better)
Translates to: PPSALWRTRRIL*HLLHWTTQWES
Trigger: TGACTCCCACTGGGTTGTCCAATGGAGCAAATGTCACAGGATACGGCGTGTACGCCAAAGGGCAGAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp CGGGCCACACACAGGTGCACCTTCCCCGAGCTGCTTTaGTTGGAGTTGTTAGAGTTCCGGTCATTGTCCATC +
Preference number: 6 (lower is better)
Translates to: RATHRCTFPELL*LELLEFRSLSI
Trigger: GATGGACAATGACCGGAACTCTAACAACTCCAAGCAAAGCAGCTCGGGGAAGGTGCACCTGTGTGTGGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp AGACTGATGCCAGAGTGGTTGAGAAAGTTCTGGTCCTaGTCACTCCCCAGAGTACCAGCCAGCCGCGACTCA +
Preference number: 6 (lower is better)
Translates to: RLMPEWLRKFWS*SLPRVPASRDS
Trigger: TGAGTCGCGGCTGGCTGGTACTCTGGGGAGTGAGCAGGACCAGAACTTTCTCAACCACTCTGGCATCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp CTGCCCTTTGGCGTACACGCCGTATCCTGTGACATTTaGTCCATTGGACAACCCAGTGGGAGTCAGTGCAGG +
Preference number: 6 (lower is better)
Translates to: LPFGVHAVSCDI*SIGQPSGSQCR
Trigger: CCTGCACTGACTCCCACTGGGTTGTCCAATGGAGCAAATGTCACAGGATACGGCGTGTACGCCAAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp CTGCTCTCTGTGTGGTACTCATCTCCATGGCAACAGTaGGGCTGCTTGCCCAGCTCTGACCCTTTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: LLSVWYSSPWQQ*GCLPSSDPLRK
Trigger: CTTCCTCAAAGGGTCAGAGCTGGGCAAGCAGCCCCACTGTTGCCATGGAGATGAGTACCACACAGAGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000111346.6
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp GCGGGCCACACACAGGTGCACCTTCCCCGAGCTGCTTaGCTTGGAGTTGTTAGAGTTCCGGTCATTGTCCAT +
Preference number: 6 (lower is better)
Translates to: AGHTQVHLPRAA*LGVVRVPVIVH
Trigger: ATGGACAATGACCGGAACTCTAACAACTCCAAGCAAAGCAGCTCGGGGAAGGTGCACCTGTGTGTGGCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 90 bp GTAACTGTAGCGGGCCACACACAGGTGCACCTTCCCCGAGCTGCTTaGCTTGGAGTTGTTAGAGTTCCGGTCATTGTCCATCTCGGACTC +
Preference number: 6 (lower is better)
Translates to: VTVAGHTQVHLPRAA*LGVVRVPVIVHLGL
Trigger: GAGTCCGAGATGGACAATGACCGGAACTCTAACAACTCCAAGCAAAGCAGCTCGGGGAAGGTGCACCTGTGTGTGGCCCGCTACAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS TCA 72 bp GGCGTGTTCAGAGGGAGGAAGCCTTGCCTCAGCAGCTaGTCCATCATCTCCTCATCATCCGCATGGATCTCA +
Preference number: 6 (lower is better)
Translates to: GVFRGRKPCLSS*SIISSSSAWIS
Trigger: TGAGATCCATGCGGATGATGAGGAGATGATGGATCAGCTGCTGAGGCAAGGCTTCCTCCCTCTGAACACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp GAGCTGCTGCCCAGCAGGTCAATACTCCCAGTGTGTTaGCGGAACTTTTCCAGGTCCCGGGACAACAAGTTA +
Preference number: 6 (lower is better)
Translates to: ELLPSRSILPVC*RNFSRSRDNKL
Trigger: TAACTTGTTGTCCCGGGACCTGGAAAAGTTCCGGCAACACACTGGGAGTATTGACCTGCTGGGCAGCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000199737.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp TGTCCATCTCGGACTCAAATCTGCATCTTGGGCTGCTaGATCGCAAGAGGAAGGAGGGCTTCACACACGGAG +
Preference number: 6 (lower is better)
Translates to: CPSRTQICILGC*IARGRRASHTE
Trigger: CTCCGTGTGTGAAGCCCTCCTTCCTCTTGCGATCCAGCAGCCCAAGATGCAGATTTGAGTCCGAGATGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp CCGGTCATTGTCCATCTCGGACTCAAATCTGCATCTTaGGCTGCTGGATCGCAAGAGGAAGGAGGGCTTCAC +
Preference number: 6 (lower is better)
Translates to: PVIVHLGLKSAS*AAGSQEEGGLH
Trigger: GTGAAGCCCTCCTTCCTCTTGCGATCCAGCAGCCCAAGATGCAGATTTGAGTCCGAGATGGACAATGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp GCCACACACAGGTGCACCTTCCCCGAGCTGCTTTGCTaGGAGTTGTTAGAGTTCCGGTCATTGTCCATCTCG +
Preference number: 6 (lower is better)
Translates to: ATHRCTFPELLC*ELLEFRSLSIS
Trigger: CGAGATGGACAATGACCGGAACTCTAACAACTCCAAGCAAAGCAGCTCGGGGAAGGTGCACCTGTGTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp AGGATGCTGTCGCGCTCCAGACTGATGCCAGAGTGGTaGAGAAAGTTCTGGTCCTGCTCACTCCCCAGAGTA +
Preference number: 6 (lower is better)
Translates to: RMLSRSRLMPEW*RKFWSCSLPRV
Trigger: TACTCTGGGGAGTGAGCAGGACCAGAACTTTCTCAACCACTCTGGCATCAGTCTGGAGCGCGACAGCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp GGCACAGCAGGGGGCTCCCAGCCCACGATGACACTTTaGGCAAGCTGTTTGATAAGGGTGATTTTCCTAGGG +
Preference number: 6 (lower is better)
Translates to: GTAGGSQPTMTL*ASCLIRVIFLG
Trigger: CCCTAGGAAAATCACCCTTATCAAACAGCTTGCCAAAAGTGTCATCGTGGGCTGGGAGCCCCCTGCTGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 90 bp AACTGCTCACTCTGCACACGGCATTTCTCTTCCAGCTCTCGGACCTaGGACTGCATGCAGTCCAGGGTGTTCTCTAACAGCTGCACAGCA +
Preference number: 6 (lower is better)
Translates to: NCSLCTRHFSSSSRT*DCMQSRVFSNSCTA
Trigger: TGCTGTGCAGCTGTTAGAGAACACCCTGGACTGCATGCAGTCCAAGGTCCGAGAGCTGGAAGAGAAATGCCGTGTGCAGAGTGAGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
CDS CAA 90 bp CGGGCCACACACAGGTGCACCTTCCCCGAGCTGCTTTGCTTGGAGTaGTTAGAGTTCCGGTCATTGTCCATCTCGGACTCAAATCTGCAT +
Preference number: 6 (lower is better)
Translates to: RATHRCTFPELLCLE*LEFRSLSISDSNLH
Trigger: ATGCAGATTTGAGTCCGAGATGGACAATGACCGGAACTCTAACAACTCCAAGCAAAGCAGCTCGGGGAAGGTGCACCTGTGTGTGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp TCCAGGTCCCGGGACAACAAGTTAAACTGCTCACTCTaGACACGGCATTTCTCTTCCAGCTCTCGGACCTTG +
Preference number: 6 (lower is better)
Translates to: SRSRDNKLNCSL*TRHFSSSSRTL
Trigger: CAAGGTCCGAGAGCTGGAAGAGAAATGCCGTGTGCAGAGTGAGCAGTTTAACTTGTTGTCCCGGGACCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000199737.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp CATTGTCCATCTCGGACTCAAATCTGCATCTTGGGCTaGTGGATCGCAAGAGGAAGGAGGGCTTCACACACG +
Preference number: 6 (lower is better)
Translates to: HCPSRTQICILG*WIARGRRASHT
Trigger: CGTGTGTGAAGCCCTCCTTCCTCTTGCGATCCAGCAGCCCAAGATGCAGATTTGAGTCCGAGATGGACAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp GAGCCTGGCACAGGTCTCCCCACGGTAGAAGCCATCTaGGTCTTTGTCTCCATATACCTTGATGATCTGTCC +
Preference number: 6 (lower is better)
Translates to: EPGTGLPTVEAI*VFVSIYLDDLS
Trigger: GGACAGATCATCAAGGTATATGGAGACAAAGACGCAGATGGCTTCTACCGTGGGGAGACCTGTGCCAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp AGTAGTGTCCAGTGGGGCCCTCGTGACCTTTGTGGATaGAGGTGGCTAGTCCATTCATGTACTGAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: SSVQWGPRDLCG*RWLVHSCTEGK
Trigger: CTTTCCCTCAGTACATGAATGGACTAGCCACCTCCATCCACAAAGGTCACGAGGGCCCCACTGGACACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp TCACGTGTTCCATCCGGTCTGCTCGTCCCATCAACGTaGAGTTTCCTAAAATCAAAGGGCCGTCTGCCACTC +
Preference number: 6 (lower is better)
Translates to: SRVPSGLLVPST*SFLKSKGRLPL
Trigger: GAGTGGCAGACGGCCCTTTGATTTTAGGAAACTCCACGTTGATGGGACGAGCAGACCGGATGGAACACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238334.2
CDS CAA 72 bp TCCGGTCATTGTCCATCTCGGACTCAAATCTGCATCTaGGGCTGCTGGATCGCAAGAGGAAGGAGGGCTTCA +
Preference number: 6 (lower is better)
Translates to: SGHCPSRTQICI*GCWIARGRRAS
Trigger: TGAAGCCCTCCTTCCTCTTGCGATCCAGCAGCCCAAGATGCAGATTTGAGTCCGAGATGGACAATGACCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp CACAGGTGCACCTTCCCCGAGCTGCTTTGCTTGGAGTaGTTAGAGTTCCGGTCATTGTCCATCTCGGACTCA +
Preference number: 6 (lower is better)
Translates to: HRCTFPELLCLE*LEFRSLSISDS
Trigger: TGAGTCCGAGATGGACAATGACCGGAACTCTAACAACTCCAAGCAAAGCAGCTCGGGGAAGGTGCACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 90 bp ACTTCTCTCTATTTTCTCCACAGGCGTGTTCAGAGGGAGGAAGCCTaGCCTCAGCAGCTGATCCATCATCTCCTCATCATCCGCATGGAT +
Preference number: 6 (lower is better)
Translates to: TSLYFLHRRVQREEA*PQQLIHHLLIIRMD
Trigger: ATCCATGCGGATGATGAGGAGATGATGGATCAGCTGCTGAGGCAAGGCTTCCTCCCTCTGAACACGCCTGTGGAGAAAATAGAGAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp CAGGACTCATCCACTTTGACGTGGGGCCCCAGGTGTTaGTCTTTGGTATCCATGTCACTTGCTAATGGCTTT +
Preference number: 6 (lower is better)
Translates to: QDSSTLTWGPRC*SLVSMSLANGF
Trigger: AAAGCCATTAGCAAGTGACATGGATACCAAAGACCAACACCTGGGGCCCCACGTCAAAGTGGATGAGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp TATTTTCTCCACAGGCGTGTTCAGAGGGAGGAAGCCTaGCCTCAGCAGCTGATCCATCATCTCCTCATCATC +
Preference number: 6 (lower is better)
Translates to: YFLHRRVQREEA*PQQLIHHLLII
Trigger: GATGATGAGGAGATGATGGATCAGCTGCTGAGGCAAGGCTTCCTCCCTCTGAACACGCCTGTGGAGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp GAGCTGCTTTGCTTGGAGTTGTTAGAGTTCCGGTCATaGTCCATCTCGGACTCAAATCTGCATCTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: ELLCLELLEFRS*SISDSNLHLGL
Trigger: CAGCCCAAGATGCAGATTTGAGTCCGAGATGGACAATGACCGGAACTCTAACAACTCCAAGCAAAGCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp CACCTTGTAGGCCATATTAGGCCTGAGGTTGAAGAATaGGTACTTGTACCTGGCTGCCTTCACGATGTCCAG +
Preference number: 6 (lower is better)
Translates to: HLVGHIRPEVEE*VLVPGCLHDVQ
Trigger: CTGGACATCGTGAAGGCAGCCAGGTACAAGTACCAATTCTTCAACCTCAGGCCTAATATGGCCTACAAGGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS GCA 72 bp AGGCCTGAGGTTGAAGAATTGGTACTTGTACCTGGCTaGCTTCACGATGTCCAGTTCTTCTTCGTTGAGGAA +
Preference number: 6 (lower is better)
Translates to: RPEVEELVLVPG*LHDVQFFFVEE
Trigger: TTCCTCAACGAAGAAGAACTGGACATCGTGAAGGCAGCCAGGTACAAGTACCAATTCTTCAACCTCAGGCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CCA 72 bp AGCACCAGGGTCAGTTTCGGACTCATCATAGAAGTCTaGAGAAAGATGGTCTCGCCCGGTGTATTCATCAAT +
Preference number: 6 (lower is better)
Translates to: STRVSFGLIIEV*RKMVSPGVFIN
Trigger: ATTGATGAATACACCGGGCGAGACCATCTTTCTCCAGACTTCTATGATGAGTCCGAAACTGACCCTGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 90 bp CAAGACCTTCACCTTGTAGGCCATATTAGGCCTGAGGTTGAAGAATaGGTACTTGTACCTGGCTGCCTTCACGATGTCCAGTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: QDLHLVGHIRPEVEE*VLVPGCLHDVQFFF
Trigger: GAAGAAGAACTGGACATCGTGAAGGCAGCCAGGTACAAGTACCAATTCTTCAACCTCAGGCCTAATATGGCCTACAAGGTGAAGGTCTTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2
CDS CAA 72 bp CACTTCTTCCAGGAAATTGGAAGGCACGAGGCCTTTTaGCCCATTCAGCTCTCCATAATAAAATCCATCTTC +
Preference number: 6 (lower is better)
Translates to: HFFQEIGRHEAF*PIQLSIIKSIF
Trigger: GAAGATGGATTTTATTATGGAGAGCTGAATGGGCAAAAAGGCCTCGTGCCTTCCAATTTCCTGGAAGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000111346.6
ENSMUST00000196085.5
ENSMUST00000198941.5
ENSMUST00000199537.5
ENSMUST00000200470.5
ENSMUST00000238334.2