Pregenerated sensors for RILPL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029392Ensembl transcript IDs: ENSMUST00000062153.12, ENSMUST00000199125.2, ENSMUST00000199766.5, ENSMUST00000200202.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTAGAGCTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTaGTGCAGGGCTTCCTGTCCTTGCTCTGTGTACCCGTCATCTCGC | + |
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Preference number: 1 (lower is better) Translates to: PRAGGRQSRQRYSHR*CRASCPCSVYPSSR Trigger: GCGAGATGACGGGTACACAGAGCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAGCTCTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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| 3UTR GCA 90 bp | GGCTTCCTGTCCTTGCTCTGTGTACCCGTCATCTCGCTGGGTAATTaGCCACTGGCCAAAGGACTCGTGGATGTGTGTGGGTCTCTGCGT | + |
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Preference number: 1 (lower is better) Translates to: GFLSLLCVPVISLGN*PLAKGLVDVCGSLR Trigger: ACGCAGAGACCCACACACATCCACGAGTCCTTTGGCCAGTGGGCAATTACCCAGCGAGATGACGGGTACACAGAGCAAGGACAGGAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR CCA 90 bp | TTATTAAATAGAGGTCCTAAGGGTTTCGAGGCATTGAGTATAAACTaGGTAGCCCTGCAGATAAATAAAACACTTCTTTCAAATTTGGCA | + |
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Preference number: 1 (lower is better) Translates to: LLNRGPKGFEALSIN*VALQINKTLLSNLA Trigger: TGCCAAATTTGAAAGAAGTGTTTTATTTATCTGCAGGGCTACCCAGTTTATACTCAATGCCTCGAAACCCTTAGGACCTCTATTTAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| 3UTR CCA 90 bp | GAAGTGTTCAGCTTAGAAAGCCTGTTAACTGAAATTAATGTGGTCTaGTTTCATATCCTCATCTTATTAAATAGAGGTCCTAAGGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: EVFSLESLLTEINVV*FHILILLNRGPKGF Trigger: GAAACCCTTAGGACCTCTATTTAATAAGATGAGGATATGAAACCAGACCACATTAATTTCAGTTAACAGGCTTTCTAAGCTGAACACTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| 3UTR-3UTR GCA 90 bp | GAACTGATGTTGAGGCGGCCGCCACCTAGAGCTGGTGGCAGGCAGTCCAGGCAGATGTGTGTGGGTCTCTaGGTGTTGGCCAGGCGCTTC | + |
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Preference number: 2 (lower is better) Translates to: ELMLRRPPPRAGGRQSRQMCVGL*VLARRF Trigger: GAAGCGCCTGGCCAACACGCAGAGACCCACACACAT...CTGCCTGGACTGCCTGCCACCAGCTCTAGGTGGCGGCCGCCTCAACATCAGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCTTGCTATCCCCGATTCAGGCTaGGGGGACGTCCTCGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: GSPGRGTVTGAAGLPVLAIPDSG*GDVLGC Trigger: ACACCCGAGGACGTCCCCCCAGCCTGAATCGGGGAT...AGCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTACCCGTCATCTCGCTaGGTAATTGCCCACTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: AGGRQSRQRYSHRCCRASYPSSR*VIAHWP Trigger: TGGCCAGTGGGCAATTACCCAGCGAGATGACGGGTA...GGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCTTATGTGTGTGGGTCTCTaGGTGTTGGCCAGGCGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: AGSPGRGTVTGAAGLPVLMCVGL*VLARRF Trigger: GAAGCGCCTGGCCAACACGCAGAGACCCACACACAT...AAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR-3UTR GCA 90 bp | CCGCCACCTAGAGCTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCAGGGCTTCCTGTCCTTaGTCTGTGTACCCGTCATCT | + |
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Preference number: 2 (lower is better) Translates to: PPPRAGGRQSRQRYSHRCRASCP*SVYPSS Trigger: AGATGACGGGTACACAGAGCAAGGACAGGAAGCCCT...GCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAGCTCTAGGTGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCTACAGTCACAGGTGCTaGAGGGCTTCCTGTCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: VAGSPGRGTVTGAAGLPVYSHRC*RASCPC Trigger: GCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTA...GACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCTTGCTCTGTGTGGGTCTCTGCGTGTTaGCCAGGCGCTTCTTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SRQRYSHRCCRASCPCSVWVSAC*PGASCP Trigger: GGGACAAGAAGCGCCTGGCCAACACGCAGAGACCCA...CACAGAGCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTTACCCGTCATCTCGCTaGGTAATTGCCCACTGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LVAGSPGRGTVTGAAGLPYPSSR*VIAHWP Trigger: TGGCCAGTGGGCAATTACCCAGCGAGATGACGGGTA...AGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR CAA 90 bp | GCCCACTGGCCAAAGGACTCGTGGATGTGTGTGGGTCTCTGCGTGTaGGCCAGGCGCTTCTTGTCCCGGGAGAAAAAGCTAAACAGTCGC | + |
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Preference number: 2 (lower is better) Translates to: AHWPKDSWMCVGLCV*ARRFLSREKKLNSR Trigger: GCGACTGTTTAGCTTTTTCTCCCGGGACAAGAAGCGCCTGGCCAACACGCAGAGACCCACACACATCCACGAGTCCTTTGGCCAGTGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTTGGGTAATTGCCCACTaGCCAAAGGACTCGTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: LVAGSPGRGTVTGAAGLPWVIAH*PKDSWM Trigger: CATCCACGAGTCCTTTGGCCAGTGGGCAATTACCCA...AGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR CAA 90 bp | GACTCGTGGATGTGTGTGGGTCTCTGCGTGTTGGCCAGGCGCTTCTaGTCCCGGGAGAAAAAGCTAAACAGTCGCTTGATCCCCGATTCA | + |
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Preference number: 2 (lower is better) Translates to: DSWMCVGLCVLARRF*SREKKLNSRLIPDS Trigger: TGAATCGGGGATCAAGCGACTGTTTAGCTTTTTCTCCCGGGACAAGAAGCGCCTGGCCAACACGCAGAGACCCACACACATCCACGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCAGGGCTTCCTGTCCTTGCTCTGTGTACCCGTCATCTCGCTGGGTAATTAGGTACAGTCACAGGTaGTGCAGGGCTTCCTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CCRASCPCSVYPSSRWVIRYSHR*CRASCP Trigger: AGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCT...AATTACCCAGCGAGATGACGGGTACACAGAGCAAGGACAGGAAGCCCTGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTGTGGGTCTCTGCGTGTTaGCCAGGCGCTTCTTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SNLASVFRHQSSKQTVRLWVSAC*PGASCP Trigger: GGGACAAGAAGCGCCTGGCCAACACGCAGAGACCCA...CAAACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCAGGGCTTCCTGTCCTTGCTCTGTGTACCCGTCATCTCGCTGGGTAATTCACTTCTTTCAAATTTaGCATCAGTTTTTCGTCATC | + |
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Preference number: 2 (lower is better) Translates to: CCRASCPCSVYPSSRWVIHFFQI*HQFFVI Trigger: GATGACGAAAAACTGATGCCAAATTTGAAAGAAGTG...AATTACCCAGCGAGATGACGGGTACACAGAGCAAGGACAGGAAGCCCTGCAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCATCCTAAACAACATTGTTTGGTTAGTACTGCGTAGCTCACAGCAGATTCACTTCTTTCAAATTTaGCATCAGTTTTTCGTCATC | + |
|
Preference number: 2 (lower is better) Translates to: CLILNNIVWLVLRSSQQIHFFQI*HQFFVI Trigger: GATGACGAAAAACTGATGCCAAATTTGAAAGAAGTG...AATCTGCTGTGAGCTACGCAGTACTAACCAAACAATGTTGTTTAGGATGAGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| 3UTR-3UTR CAA 90 bp | GTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCGTGGGTCTCTGCGTGTaGGCCAGGCGCTTCTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VAGSPGRGTVTGAAGLPVVGLCV*ARRFLS Trigger: GGACAAGAAGCGCCTGGCCAACACGCAGAGACCCAC...GACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCCAGGGCTTCCTGTCCTaGCTCTGTGTACCCGTCATC | + |
|
Preference number: 3 (lower is better) Translates to: AGGRQSRQRYSHRCCRASQGFLS*LCVPVI Trigger: GATGACGGGTACACAGAGCAAGGACAGGAAGCCCTG...GGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR GCA 72 bp | GGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTaGTGCAGGGCTTCCTGTCCTTGCTCTGTGTACCCG | + |
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Preference number: 3 (lower is better) Translates to: GGRQSRQRYSHR*CRASCPCSVYP Trigger: CGGGTACACAGAGCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCTTGCTCTGTGGGTCTCTGCGTGTaGGCCAGGCGCTTCTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QSRQRYSHRCCRASCPCSVGLCV*ARRFLS Trigger: GGACAAGAAGCGCCTGGCCAACACGCAGAGACCCAC...AGAGCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR CCA 72 bp | TCTCGCTGGGTAATTGCCCACTGGCCAAAGGACTCGTaGATGTGTGTGGGTCTCTGCGTGTTGGCCAGGCGC | + |
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Preference number: 3 (lower is better) Translates to: SRWVIAHWPKDS*MCVGLCVLARR Trigger: GCGCCTGGCCAACACGCAGAGACCCACACACATCCACGAGTCCTTTGGCCAGTGGGCAATTACCCAGCGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR GCA 72 bp | TCCTTGCTCTGTGTACCCGTCATCTCGCTGGGTAATTaGCCACTGGCCAAAGGACTCGTGGATGTGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: SLLCVPVISLGN*PLAKGLVDVCG Trigger: CCCACACACATCCACGAGTCCTTTGGCCAGTGGGCAATTACCCAGCGAGATGACGGGTACACAGAGCAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR GCA 72 bp | AGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCTTaGTCTGTGTACCCGTCATCTCGCTGGGTAATTGCC | + |
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Preference number: 3 (lower is better) Translates to: RYSHRCCRASCP*SVYPSSRWVIA Trigger: GGCAATTACCCAGCGAGATGACGGGTACACAGAGCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| 3UTR CCA 72 bp | GCAGATTCCAAGGCACACCATCTCGGACAGGCTTCTTaGGCCTCTAGCTTTATCAGAACAAAGTGTGACAGT | + |
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Preference number: 3 (lower is better) Translates to: ADSKAHHLGQAS*ASSFIRTKCDS Trigger: ACTGTCACACTTTGTTCTGATAAAGCTAGAGGCCCAAGAAGCCTGTCCGAGATGGTGTGCCTTGGAATCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| 3UTR CCA 72 bp | AGAGGTCCTAAGGGTTTCGAGGCATTGAGTATAAACTaGGTAGCCCTGCAGATAAATAAAACACTTCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: RGPKGFEALSIN*VALQINKTLLS Trigger: TGAAAGAAGTGTTTTATTTATCTGCAGGGCTACCCAGTTTATACTCAATGCCTCGAAACCCTTAGGACCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| 3UTR CCA 72 bp | AGCTTAGAAAGCCTGTTAACTGAAATTAATGTGGTCTaGTTTCATATCCTCATCTTATTAAATAGAGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: SLESLLTEINVV*FHILILLNRGP Trigger: AGGACCTCTATTTAATAAGATGAGGATATGAAACCAGACCACATTAATTTCAGTTAACAGGCTTTCTAAGCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR TCA 90 bp | GCTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCGGCGGTTGGGGTCCTTaGGGTCCAGGGCGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AGGRQSRQRYSHRCCRASGGWGP*GPGRPS Trigger: AGAAGGCCGCCCTGGACCTCAAGGACCCCAACCGCC...GGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| CDS-3UTR TCA 90 bp | GTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCGCAGCTCCTGGAGCGTaGACCTCGGGCGGTTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: VAGSPGRGTVTGAAGLPVAAPGA*TSGGWG Trigger: ACCCCAACCGCCCGAGGTTCACGCTCCAGGAGCTGC...GACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| CDS-3UTR CCA 90 bp | CACTGGCCAAAGGACTCGTGGATGTGTGTGGGTCTCTGCGTGTTGGCCAGGCGCACGTCCCGCAGCTCCTaGAGCGTGAACCTCGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: HWPKDSWMCVGLCVLARRTSRSS*SVNLGR Trigger: CCGCCCGAGGTTCACGCTCCAGGAGCTGCGGGACGT...GCGCCTGGCCAACACGCAGAGACCCACACACATCCACGAGTCCTTTGGCCAGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| CDS-3UTR TCA 90 bp | CTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGGGCCTCAACCACGGTaGCCCGGTGCCGAAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LVAGSPGRGTVTGAAGLPGPQPR*PGAEGH Trigger: ATGACCTTCGGCACCGGGTCACCGTGGTTGAGGCCC...AGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
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| CDS-3UTR TCA 90 bp | ACTGGCCAAAGGACTCGTGGATGTGTGTGGGTCTCTGCGTGTTGGCCAGGCGCTGCAGCTCCTGGAGCGTaGACCTCGGGCGGTTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TGQRTRGCVWVSACWPGAAAPGA*TSGGWG Trigger: ACCCCAACCGCCCGAGGTTCACGCTCCAGGAGCTGC...AGCGCCTGGCCAACACGCAGAGACCCACACACATCCACGAGTCCTTTGGCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| CDS-3UTR GCA 90 bp | GTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCGTTCAGCCCGCAGGCTaGCCATCTCCTGCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VAGSPGRGTVTGAAGLPVVQPAG*PSPAPW Trigger: CCAAGGAGCAGGAGATGGGCAGCCTGCGGGCTGAAC...GACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
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| CDS-3UTR GCA 90 bp | CACTGGCCAAAGGACTCGTGGATGTGTGTGGGTCTCTGCGTGTTGGCCAGGCGCTCCCCATTCTGGCTGTaGTCGCCCTGCAGCCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: HWPKDSWMCVGLCVLARRSPFWL*SPCSLS Trigger: CGAGAGGCTGCAGGGCGAGCACAGCCAGAATGGGGA...GCGCCTGGCCAACACGCAGAGACCCACACACATCCACGAGTCCTTTGGCCAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
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| CDS-3UTR CCA 90 bp | GCTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCATCAGGGCTTTCCCCTaGGCCTCAACCACGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: AGGRQSRQRYSHRCCRASIRAFP*ASTTVT Trigger: GGTCACCGTGGTTGAGGCCCAGGGGAAAGCCCTGAT...GGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
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| CDS-3UTR GCA 90 bp | TTTGAGGAACTGATGTTGAGGCGGCCGCCACCTAGAGCTGGTGGCAGGCAGTCCCTTGGGCATGAGGCGTaGGATGGACTCGCAGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: FEELMLRRPPPRAGGRQSLGHEA*DGLAAV Trigger: CACGGCTGCGAGTCCATCGCACGCCTCATGCCCAAG...GGACTGCCTGCCACCAGCTCTAGGTGGCGGCCGCCTCAACATCAGTTCCTCAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR GCA 90 bp | CACTGGCCAAAGGACTCGTGGATGTGTGTGGGTCTCTGCGTGTTGGCCAGGCGCTGGCTGTGCTCGCCCTaGAGCCTCTCGCGAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: HWPKDSWMCVGLCVLARRWLCSP*SLSRSF Trigger: AAAGCTTCGCGAGAGGCTGCAGGGCGAGCACAGCCA...GCGCCTGGCCAACACGCAGAGACCCACACACATCCACGAGTCCTTTGGCCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
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| CDS-3UTR GCA 90 bp | GCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCTTAGCTCGTTCCTCTCGTaGAGGACGTCCCGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AGSPGRGTVTGAAGLPVLSSFLS*RTSRSS Trigger: GGAGCTGCGGGACGTCCTGCACGAGAGGAACGAGCT...AAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| CDS-3UTR CCA 90 bp | GGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCTTGCTTCCTCCTCCCCATTCTaGCTGTGCTCGCCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GSPGRGTVTGAAGLPVLASSSPF*LCSPCS Trigger: GCTGCAGGGCGAGCACAGCCAGAATGGGGAGGAGGA...AGCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
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| CDS-3UTR GCA 90 bp | GTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCACCACGGTGACCCGGTaGCGAAGGTCATGGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: VAGSPGRGTVTGAAGLPVTTVTR*RRSWLI Trigger: GATCAACCATGACCTTCGGCACCGGGTCACCGTGGT...GACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
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| CDS-3UTR CCA 90 bp | GTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCGATTCCTCTCCATCTaGCTGCGGCTGGATCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAGSPGRGTVTGAAGLPVRFLSI*LRLDLS Trigger: GCTGAGATCCAGCCGCAGCCAGATGGAGAGGAATCG...GACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
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| CDS-3UTR TCA 90 bp | TCACAGCAGATTCCAAGGCACACCATCTCGGACAGGCTTCTTGGGCCTCTAGCTGGGCCTCAACCACGGTaGCCCGGTGCCGAAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SQQIPRHTISDRLLGPLAGPQPR*PGAEGH Trigger: ATGACCTTCGGCACCGGGTCACCGTGGTTGAGGCCC...AGCTAGAGGCCCAAGAAGCCTGTCCGAGATGGTGTGCCTTGGAATCTGCTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR GCA 90 bp | CAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCTTGCTCTTCCTCTCCATCTGGCTaGGGCTGGATCTCAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QSRQRYSHRCCRASCPCSSSPSG*GWISAS Trigger: GGAGGCTGAGATCCAGCCGCAGCCAGATGGAGAGGA...AGAGCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
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| CDS-3UTR TCA 90 bp | CACTGGCCAAAGGACTCGTGGATGTGTGTGGGTCTCTGCGTGTTGGCCAGGCGCGAAACACCTTGGACTTaGGCTCGTTCCTCTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HWPKDSWMCVGLCVLARRETPWT*ARSSRA Trigger: TGCACGAGAGGAACGAGCTCAAGTCCAAGGTGTTTC...GCGCCTGGCCAACACGCAGAGACCCACACACATCCACGAGTCCTTTGGCCAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGCAGGGCTTCCTGTCCTTGCTCTGTGTACCCGTCATCTCGCTGGGTAATTAGCTCGTTCCTCTCGTaGAGGACGTCCCGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CCRASCPCSVYPSSRWVISSFLS*RTSRSS Trigger: GGAGCTGCGGGACGTCCTGCACGAGAGGAACGAGCT...AATTACCCAGCGAGATGACGGGTACACAGAGCAAGGACAGGAAGCCCTGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGCCAAAGGACTCGTGGATGTGTGTGGGTCTCTGCGTGTTGGCCAGGCGCTAAGGATCAATCCAGCTaGCACCATGGGCATGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGQRTRGCVWVSACWPGAKDQSS*HHGHDG Trigger: GCCGTCATGCCCATGGTGGCAGCTGGATTGATCCTT...AGCGCCTGGCCAACACGCAGAGACCCACACACATCCACGAGTCCTTTGGCCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGCAGGGCTTCCTGTCCTTGCTCTGTGTACCCGTCATCTCGCTGGGTAATTCCATCTGGCTGCGGCTaGATCTCAGCCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CCRASCPCSVYPSSRWVIPSGCG*ISASSS Trigger: GGAGGAGGAGGCTGAGATCCAGCCGCAGCCAGATGG...AATTACCCAGCGAGATGACGGGTACACAGAGCAAGGACAGGAAGCCCTGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGCAGGGCTTCCTGTCCTTGCTCTGTGTACCCGTCATCTCGCTGGGTAATTATCCCCGATTCAGGCTaGGGGGACGTCCTCGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CCRASCPCSVYPSSRWVIIPDSG*GDVLGC Trigger: ACACCCGAGGACGTCCCCCCAGCCTGAATCGGGGAT...AATTACCCAGCGAGATGACGGGTACACAGAGCAAGGACAGGAAGCCCTGCAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
||
| CDS-3UTR TCA 90 bp | TCACAGCAGATTCCAAGGCACACCATCTCGGACAGGCTTCTTGGGCCTCTAGCTAGCCGTGTTGGTCGATaGCCCTCTCGAACTCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQQIPRHTISDRLLGPLASRVGR*PSRTRG Trigger: GCCACGAGTTCGAGAGGGTCATCGACCAACACGGCT...AGCTAGAGGCCCAAGAAGCCTGTCCGAGATGGTGTGCCTTGGAATCTGCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCGCCGAAGGTCATGGTTaGTCTTCATTAGCCTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAGSPGRGTVTGAAGLPVAEGHG*SSLASS Trigger: AGACGAGGCTAATGAAGATCAACCATGACCTTCGGC...GACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAGGAACTGATGTTGAGGCGGCCGCCACCTAGAGCTGGTGGCAGGCAGTCCAAGCCCACGTCCTTGTaGTTGAGGTTGGTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FEELMLRRPPPRAGGRQSKPTSL*LRLVIS Trigger: GCTGATGACCAACCTCAACCACAAGGACGTGGGCTT...GGACTGCCTGCCACCAGCTCTAGGTGGCGGCCGCCTCAACATCAGTTCCTCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| 3UTR CAA 72 bp | GTCCTCAAAGCAGACAGTTCGTTTGAGGAACTGATGTaGAGGCGGCCGCCACCTAGAGCTGGTGGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLKADSSFEELM*RRPPPRAGGRQ Trigger: CTGCCTGCCACCAGCTCTAGGTGGCGGCCGCCTCAACATCAGTTCCTCAAACGAACTGTCTGCTTTGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000200202.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCTTGCTCTGTGGAAACACCTTGGACTTaGGCTCGTTCCTCTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRQRYSHRCCRASCPCSVETPWT*ARSSRA Trigger: TGCACGAGAGGAACGAGCTCAAGTCCAAGGTGTTTC...CACAGAGCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
||
| 3UTR CAA 72 bp | GAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCTaGCTCTGTGTACCCGTCATCTCGCTGGGTAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVQSQVLQGFLS*LCVPVISLGNC Trigger: GCAATTACCCAGCGAGATGACGGGTACACAGAGCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
||
| 3UTR CAA 72 bp | CCAAAGGACTCGTGGATGTGTGTGGGTCTCTGCGTGTaGGCCAGGCGCTTCTTGTCCCGGGAGAAAAAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PKDSWMCVGLCV*ARRFLSREKKL Trigger: TAGCTTTTTCTCCCGGGACAAGAAGCGCCTGGCCAACACGCAGAGACCCACACACATCCACGAGTCCTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCTAGCTTTATCAGAACAAAGTGTGACAGTCCTGTGGTTGTTTCTAGCGAGGCAGCTCCTGGAGCGTaGACCTCGGGCGGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSFIRTKCDSPVVVSSEAAPGA*TSGGWG Trigger: ACCCCAACCGCCCGAGGTTCACGCTCCAGGAGCTGC...CTCGCTAGAAACAACCACAGGACTGTCACACTTTGTTCTGATAAAGCTAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR GCA 90 bp | TGCTGCAGGGCTTCCTGTCCTTGCTCTGTGTACCCGTCATCTCGCTGGGTAATTTCGAGCTCCACCTTCTaGTCAATCAGGGCTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CCRASCPCSVYPSSRWVISSSTF*SIRAFP Trigger: GGGGAAAGCCCTGATTGAGCAGAAGGTGGAGCTCGA...AATTACCCAGCGAGATGACGGGTACACAGAGCAAGGACAGGAAGCCCTGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTCCCGGGAGAAAAAGCTAAACAGTCGCTTGATCCCCGATTCAGGCTGGGGTTTTCAGCTTCTCCCTaGAGGTGGAAGCCAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LVPGEKAKQSLDPRFRLGFSASP*RWKPAT Trigger: GGTGGCTGGCTTCCACCTCCAGGGAGAAGCTGAAAA...CCCCAGCCTGAATCGGGGATCAAGCGACTGTTTAGCTTTTTCTCCCGGGACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTCCTCACCGACAAAGGCCGTAAGAAAACAAACAAAACCTAGGAGTCAATCGGGAGCGACGTGGTaGCGGCTAACCAGCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LCSSPTKAVRKQTKPRSQSGATW*RLTSTS Trigger: CGAGGTGCTGGTTAGCCGGCACCACGTCGCTCCCGA...TTGACTCCTAGGTTTTGTTTGTTTTCTTACGGCCTTTGTCGGTGAGGAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CCA 90 bp | CCTCTAGCTTTATCAGAACAAAGTGTGACAGTCCTGTGGTTGTTTCTAGCGAGTACGTCCCGCAGCTCCTaGAGCGTGAACCTCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLALSEQSVTVLWLFLASTSRSS*SVNLGR Trigger: CCGCCCGAGGTTCACGCTCCAGGAGCTGCGGGACGT...ACTCGCTAGAAACAACCACAGGACTGTCACACTTTGTTCTGATAAAGCTAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CCA 90 bp | TTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTGAGGAACACGTCCCGCAGCTCCTaGAGCGTGAACCTCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LASVFRHQSSKQTVRLRNTSRSS*SVNLGR Trigger: CCGCCCGAGGTTCACGCTCCAGGAGCTGCGGGACGT...GTTCCTCAAACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000200202.2 |
||
| CDS-3UTR CCA 90 bp | GGACAGGCTTCTTGGGCCTCTAGCTTTATCAGAACAAAGTGTGACAGTCCTGTGGACTCGCAGCCGTGTTaGTCGATGACCCTCTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GQASWASSFIRTKCDSPVDSQPC*SMTLSN Trigger: GTTCGAGAGGGTCATCGACCAACACGGCTGCGAGTC...CACAGGACTGTCACACTTTGTTCTGATAAAGCTAGAGGCCCAAGAAGCCTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CCA 90 bp | TCACAGCAGATTCCAAGGCACACCATCTCGGACAGGCTTCTTGGGCCTCTAGCTCGGTGCCGAAGGTCATaGTTGATCTTCATTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQQIPRHTISDRLLGPLARCRRS*LIFISL Trigger: GAGGCTAATGAAGATCAACCATGACCTTCGGCACCG...AGCTAGAGGCCCAAGAAGCCTGTCCGAGATGGTGTGCCTTGGAATCTGCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR TCA 90 bp | TCTTTCAAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGGGCGGTTGGGGTCCTTaGGGTCCAGGGCGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFKFGISFSSSVLKADSSGGWGP*GPGRPS Trigger: AGAAGGCCGCCCTGGACCTCAAGGACCCCAACCGCC...CGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTTGAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000200202.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTTGGGCCTCTAGCTTTATCAGAACAAAGTGTGACAGTCCTGTGGTTGTTTTCCCCATTCTGGCTGTaGTCGCCCTGCAGCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLGPLALSEQSVTVLWLFSPFWL*SPCSLS Trigger: CGAGAGGCTGCAGGGCGAGCACAGCCAGAATGGGGA...AAACAACCACAGGACTGTCACACTTTGTTCTGATAAAGCTAGAGGCCCAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CCA 90 bp | TTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTGAGGAACTCCTCCTCCCCATTCTaGCTGTGCTCGCCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LASVFRHQSSKQTVRLRNSSSPF*LCSPCS Trigger: GCTGCAGGGCGAGCACAGCCAGAATGGGGAGGAGGA...GTTCCTCAAACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CCA 90 bp | AAAACTCCCTTCCTCTGCTCCTCACCGACAAAGGCCGTAAGAAAACAAACAAAAATCCCCGATTCAGGCTaGGGGGACGTCCTCGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KTPFLCSSPTKAVRKQTKIPDSG*GDVLGC Trigger: ACACCCGAGGACGTCCCCCCAGCCTGAATCGGGGAT...TTTTGTTTGTTTTCTTACGGCCTTTGTCGGTGAGGAGCAGAGGAAGGGAGTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CCA 90 bp | GGACAGGCTTCTTGGGCCTCTAGCTTTATCAGAACAAAGTGTGACAGTCCTGTGTACCCGTCATCTCGCTaGGTAATTGCCCACTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQASWASSFIRTKCDSPVYPSSR*VIAHWP Trigger: TGGCCAGTGGGCAATTACCCAGCGAGATGACGGGTA...CACAGGACTGTCACACTTTGTTCTGATAAAGCTAGAGGCCCAAGAAGCCTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CCA 90 bp | TTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTGAGGAACACCCTCTCGAACTCGTaGCCCACGAGCGACGCGATA | + |
|
Preference number: 4 (lower is better) Translates to: LASVFRHQSSKQTVRLRNTLSNS*PTSDAI Trigger: TATCGCGTCGCTCGTGGGCCACGAGTTCGAGAGGGT...GTTCCTCAAACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CCA 90 bp | TTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTGAGGAACTGGGTCTCTGCGTGTTaGCCAGGCGCTTCTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LASVFRHQSSKQTVRLRNWVSAC*PGASCP Trigger: GGGACAAGAAGCGCCTGGCCAACACGCAGAGACCCA...GTTCCTCAAACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR GCA 90 bp | TGTCTCATCCTAAACAACATTGTTTGGTTAGTACTGCGTAGCTCACAGCAGATTGGACAGGAGGTCCTGTaGTTCACCCCGCCACACGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLILNNIVWLVLRSSQQIGQEVL*FTPPHV Trigger: GACGTGTGGCGGGGTGAAGCACAGGACCTCCTGTCC...AATCTGCTGTGAGCTACGCAGTACTAACCAAACAATGTTGTTTAGGATGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR GCA 90 bp | GCCTCTAGCTTTATCAGAACAAAGTGTGACAGTCCTGTGGTTGTTTCTAGCGAGTCGAGCTCCACCTTCTaGTCAATCAGGGCTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASSFIRTKCDSPVVVSSESSSTF*SIRAFP Trigger: GGGGAAAGCCCTGATTGAGCAGAAGGTGGAGCTCGA...CTCGCTAGAAACAACCACAGGACTGTCACACTTTGTTCTGATAAAGCTAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR GCA 90 bp | TCAAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTGGTTCAGCCCGCAGGCTaGCCATCTCCTGCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNLASVFRHQSSKQTVRLVQPAG*PSPAPW Trigger: CCAAGGAGCAGGAGATGGGCAGCCTGCGGGCTGAAC...CAAACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR GCA 90 bp | TGTCTCATCCTAAACAACATTGTTTGGTTAGTACTGCGTAGCTCACAGCAGATTAGCTCGTTCCTCTCGTaGAGGACGTCCCGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLILNNIVWLVLRSSQQISSFLS*RTSRSS Trigger: GGAGCTGCGGGACGTCCTGCACGAGAGGAACGAGCT...AATCTGCTGTGAGCTACGCAGTACTAACCAAACAATGTTGTTTAGGATGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CCA 90 bp | TCAAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTGCCATCTGGCTGCGGCTaGATCTCAGCCTCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNLASVFRHQSSKQTVRLPSGCG*ISASSS Trigger: GGAGGAGGAGGCTGAGATCCAGCCGCAGCCAGATGG...CAAACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR TCA 90 bp | TTTCAAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTCACGACCTTGGGCATaGGGCGTGCGATGGACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FQIWHQFFVISPQSRQFVSRPWA*GVRWTR Trigger: GCGAGTCCATCGCACGCCTCATGCCCAAGGTCGTGA...AACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR GCA 90 bp | GATTCACGCTTCCTGTTATGTATAGCCTGCTACCTCCAGGGCAACTTCATGATATCTGACATGCCTTCCTaGTTCTGGAACTCCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: DSRFLLCIACYLQGNFMISDMPS*FWNSSS Trigger: CGAGGAGGAGTTCCAGAAGCAGGAAGGCATGTCAGA...TATCATGAAGTTGCCCTGGAGGTAGCAGGCTATACATAACAGGAAGCGTGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR GCA 90 bp | GATAGTGGCGAAGTGTTCAGCTTAGAAAGCCTGTTAACTGAAATTAATGTGGTCTGGCTGTGCTCGCCCTaGAGCCTCTCGCGAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSGEVFSLESLLTEINVVWLCSP*SLSRSF Trigger: AAAGCTTCGCGAGAGGCTGCAGGGCGAGCACAGCCA...GACCACATTAATTTCAGTTAACAGGCTTTCTAAGCTGAACACTTCGCCACTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR GCA 90 bp | GATAGTGGCGAAGTGTTCAGCTTAGAAAGCCTGTTAACTGAAATTAATGTGGTCTCCTCTCCATCTGGCTaGGGCTGGATCTCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSGEVFSLESLLTEINVVSSPSG*GWISAS Trigger: GGAGGCTGAGATCCAGCCGCAGCCAGATGGAGAGGA...GACCACATTAATTTCAGTTAACAGGCTTTCTAAGCTGAACACTTCGCCACTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR GCA 90 bp | AAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTGAGCGGAGCTCATCCCTCTaGTTGTCCACCACCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KFGISFSSSVLKADSSFERSSSL*LSTTSF Trigger: GAAGGAGGTGGTGGACAAGCAGAGGGATGAGCTCCG...CTCAAACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR GCA 90 bp | GATAGTGGCGAAGTGTTCAGCTTAGAAAGCCTGTTAACTGAAATTAATGTGGTCCTCGTCTGCTGCTGCTaGAAAGCCTCGACGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSGEVFSLESLLTEINVVLVCCC*KASTSS Trigger: TGAGGACGTCGAGGCTTTGCAGCAGCAGCAGACGAG...GACCACATTAATTTCAGTTAACAGGCTTTCTAAGCTGAACACTTCGCCACTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR GCA 90 bp | GTGGTCTGGTTTCATATCCTCATCTTATTAAATAGAGGTCCTAAGGGTTTCGAGACCACGGTGACCCGGTaGCGAAGGTCATGGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VVWFHILILLNRGPKGFETTVTR*RRSWLI Trigger: GATCAACCATGACCTTCGGCACCGGGTCACCGTGGT...CTCGAAACCCTTAGGACCTCTATTTAATAAGATGAGGATATGAAACCAGACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR GCA 90 bp | TCTTTCAAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGATGTGTGTGGGTCTCTaGGTGTTGGCCAGGCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFKFGISFSSSVLKADSSMCVGL*VLARRF Trigger: GAAGCGCCTGGCCAACACGCAGAGACCCACACACAT...CGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTTGAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CCA 90 bp | TCTTTCAAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGCGATTCCTCTCCATCTaGCTGCGGCTGGATCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFKFGISFSSSVLKADSSRFLSI*LRLDLS Trigger: GCTGAGATCCAGCCGCAGCCAGATGGAGAGGAATCG...CGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTTGAAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CCA 90 bp | CCTCTAGCTTTATCAGAACAAAGTGTGACAGTCCTGTGGTTGTTTCTAGCGAGTTGGGTAATTGCCCACTaGCCAAAGGACTCGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PLALSEQSVTVLWLFLASWVIAH*PKDSWM Trigger: CATCCACGAGTCCTTTGGCCAGTGGGCAATTACCCA...ACTCGCTAGAAACAACCACAGGACTGTCACACTTTGTTCTGATAAAGCTAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CCA 90 bp | TTTCAAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTGCTTCTCCCTGGAGGTaGAAGCCAGCCACCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FQIWHQFFVISPQSRQFVASPWR*KPATTC Trigger: ACAGGTGGTGGCTGGCTTCCACCTCCAGGGAGAAGC...AACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTGAGGAACCGATTCCTCTCCATCTaGCTGCGGCTGGATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LASVFRHQSSKQTVRLRNRFLSI*LRLDLL Trigger: AAGAAGATCCAGCCGCAGCCAGATGGAGAGGAATCG...GTTCCTCAAACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTCAAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGCCACGTCCTTGTGGTTaGGGTTGGTCATCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFKFGISFSSSVLKADSSPRPCG*GWSSAA Trigger: AGCAGCTGATGACCAACCTCAACCACAAGGACGTGG...CGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTTGAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR TCA 90 bp | AAAACTCCCTTCCTCTGCTCCTCACCGACAAAGGCCGTAAGAAAACAAACAAAAGCCGAAGGTCATGGTTaGTCTTCATTAGCCTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTPFLCSSPTKAVRKQTKAEGHG*SSLASS Trigger: AGACGAGGCTAATGAAGATCAACCATGACCTTCGGC...TTTTGTTTGTTTTCTTACGGCCTTTGTCGGTGAGGAGCAGAGGAAGGGAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR GCA 90 bp | GCCTCTAGCTTTATCAGAACAAAGTGTGACAGTCCTGTGGTTGTTTCTAGCGAGGCTCCTTTTGATGCTTaGGCTCCTTTTCAATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASSFIRTKCDSPVVVSSEAPFDA*APFQCG Trigger: ACCGCATTGAAAAGGAGCGCAAGCATCAAAAGGAGC...CTCGCTAGAAACAACCACAGGACTGTCACACTTTGTTCTGATAAAGCTAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR GCA 90 bp | GTGGTCTGGTTTCATATCCTCATCTTATTAAATAGAGGTCCTAAGGGTTTCGAGAGCCTCTTCATCACCTaGCGCTCACGCTCTGACATG | + |
|
Preference number: 4 (lower is better) Translates to: VVWFHILILLNRGPKGFESLFIT*RSRSDM Trigger: CATGTCAGAGCGTGAGCGGCAGGTGATGAAGAGGCT...CTCGAAACCCTTAGGACCTCTATTTAATAAGATGAGGATATGAAACCAGACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CCA 90 bp | TGGTTTCATATCCTCATCTTATTAAATAGAGGTCCTAAGGGTTTCGAGGCATTGTGCAGCTGGGCAATCTaGGACAGGAGGTCCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WFHILILLNRGPKGFEALCSWAI*DRRSCA Trigger: AGCACAGGACCTCCTGTCCCAGATTGCCCAGCTGCA...CAATGCCTCGAAACCCTTAGGACCTCTATTTAATAAGATGAGGATATGAAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CCA 90 bp | GAAGTGTTCAGCTTAGAAAGCCTGTTAACTGAAATTAATGTGGTCTGGTTTCATATCAGGGCTTTCCCCTaGGCCTCAACCACGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: EVFSLESLLTEINVVWFHIRAFP*ASTTVT Trigger: GGTCACCGTGGTTGAGGCCCAGGGGAAAGCCCTGAT...ATGAAACCAGACCACATTAATTTCAGTTAACAGGCTTTCTAAGCTGAACACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR TCA 90 bp | AAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTGAGGAAACACCTTGGACTTaGGCTCGTTCCTCTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KFGISFSSSVLKADSSFEETPWT*ARSSRA Trigger: TGCACGAGAGGAACGAGCTCAAGTCCAAGGTGTTTC...CTCAAACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000200202.2 |
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| CDS-3UTR GCA 90 bp | GGTTTCGAGGCATTGAGTATAAACTGGGTAGCCCTGCAGATAAATAAAACACTTGCTCACGCTCTGACATaGCTTCCTGCTTCTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: GFEALSINWVALQINKTLAHALT*LPASGT Trigger: AGTTCCAGAAGCAGGAAGGCATGTCAGAGCGTGAGC...AAGTGTTTTATTTATCTGCAGGGCTACCCAGTTTATACTCAATGCCTCGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR GCA 90 bp | GTGGTCTGGTTTCATATCCTCATCTTATTAAATAGAGGTCCTAAGGGTTTCGAGAGGGCTTCCTGTCCTTaGTCTGTGTACCCGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VVWFHILILLNRGPKGFERASCP*SVYPSS Trigger: AGATGACGGGTACACAGAGCAAGGACAGGAAGCCCT...CTCGAAACCCTTAGGACCTCTATTTAATAAGATGAGGATATGAAACCAGACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | CCGCCACCTAGAGCTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCGGGCGGTTGGGGTCCTaGAGGTCCAGGGCGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPPRAGGRQSRQRYSHRCGRLGS*RSRAAF Trigger: GAAGGCCGCCCTGGACCTCAAGGACCCCAACCGCCC...GCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAGCTCTAGGTGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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| CDS GCA 90 bp | CGGTCCAGTTCCAGGCGCAGCTCGTCTAGCTCGGGAGCGACGTGGTaGCGGCTAACCAGCACCTCGAGGATCTCCAGGACCCTCACGACC | + |
|
Preference number: 5 (lower is better) Translates to: RSSSRRSSSSSGATW*RLTSTSRISRTLTT Trigger: GGTCGTGAGGGTCCTGGAGATCCTCGAGGTGCTGGTTAGCCGGCACCACGTCGCTCCCGAGCTAGACGAGCTGCGCCTGGAACTGGACCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | GTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCGGGCGGTTGGGGTCCTaGAGGTCCAGGGCGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VAGSPGRGTVTGAAGLPVGRLGS*RSRAAF Trigger: GAAGGCCGCCCTGGACCTCAAGGACCCCAACCGCCC...GACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| CDS CCA 90 bp | TTGGACTTGAGCTCGTTCCTCTCGTGCAGGACGTCCCGCAGCTCCTaGAGCGTGAACCTCGGGCGGTTGGGGTCCTTGAGGTCCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LDLSSFLSCRTSRSS*SVNLGRLGSLRSRA Trigger: CGCCCTGGACCTCAAGGACCCCAACCGCCCGAGGTTCACGCTCCAGGAGCTGCGGGACGTCCTGCACGAGAGGAACGAGCTCAAGTCCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 ENSMUST00000199766.5 ENSMUST00000200202.2 |
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| CDS GCA 90 bp | CGCCCTGCAGCCTCTCGCGAAGCTTTCCGAGTTCAGCCCGCAGGCTaGCCATCTCCTGCTCCTTGGTCTGCAGGTCTGCTTCGAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RPAASREAFRVQPAG*PSPAPWSAGLLRAP Trigger: TGGAGCTCGAAGCAGACCTGCAGACCAAGGAGCAGGAGATGGGCAGCCTGCGGGCTGAACTCGGAAAGCTTCGCGAGAGGCTGCAGGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 ENSMUST00000199766.5 |
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| CDS-3UTR CAA 90 bp | GAGCTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTGTGAACCTCGGGCGGTaGGGGTCCTTGAGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ELVAGSPGRGTVTGAAGLVNLGR*GSLRSR Trigger: CCTGGACCTCAAGGACCCCAACCGCCCGAGGTTCAC...AAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| CDS CCA 90 bp | CTCACGACCTTGGGCATGAGGCGTGCGATGGACTCGCAGCCGTGTTaGTCGATGACCCTCTCGAACTCGTGGCCCACGAGCGACGCGATA | + |
|
Preference number: 5 (lower is better) Translates to: LTTLGMRRAMDSQPC*SMTLSNSWPTSDAI Trigger: TATCGCGTCGCTCGTGGGCCACGAGTTCGAGAGGGTCATCGACCAACACGGCTGCGAGTCCATCGCACGCCTCATGCCCAAGGTCGTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS TCA 90 bp | TCTCGAACTCGTGGCCCACGAGCGACGCGATATCGTACACATCCATaGCGGTCAGCTCCGCCACGTTCTTCTCCAGAGCCGACAGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRTRGPRATRYRTHP*RSAPPRSSPEPTGR Trigger: CCGCCCTGTCGGCTCTGGAGAAGAACGTGGCGGAGCTGACCGTCATGGATGTGTACGATATCGCGTCGCTCGTGGGCCACGAGTTCGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS TCA 90 bp | CGGGCGGTTGGGGTCCTTGAGGTCCAGGGCGGCCTTCTCTGCATCTaGAATCGATTCCTCTCCATCTGGCTGCGGCTGGATCTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RAVGVLEVQGGLLCI*NRFLSIWLRLDLSL Trigger: GAGGCTGAGATCCAGCCGCAGCCAGATGGAGAGGAATCGATTTCAGATGCAGAGAAGGCCGCCCTGGACCTCAAGGACCCCAACCGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 ENSMUST00000199766.5 |
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| CDS GCA 90 bp | CACCTCGAGGATCTCCAGGACCCTCACGACCTTGGGCATGAGGCGTaGGATGGACTCGCAGCCGTGTTGGTCGATGACCCTCTCGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: HLEDLQDPHDLGHEA*DGLAAVLVDDPLEL Trigger: GAGTTCGAGAGGGTCATCGACCAACACGGCTGCGAGTCCATCGCACGCCTCATGCCCAAGGTCGTGAGGGTCCTGGAGATCCTCGAGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | GTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCTTGCTCTGTGTGAACCTCGGGCGGTaGGGGTCCTTGAGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VQAEVQSQVLQGFLSLLCVNLGR*GSLRSR Trigger: CCTGGACCTCAAGGACCCCAACCGCCCGAGGTTCAC...ACAGAGCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| CDS GCA 90 bp | ATCTCCTGCTCCTTGGTCTGCAGGTCTGCTTCGAGCTCCACCTTCTaGTCAATCAGGGCTTTCCCCTGGGCCTCAACCACGGTGACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ISCSLVCRSASSSTF*SIRAFPWASTTVTR Trigger: CCGGGTCACCGTGGTTGAGGCCCAGGGGAAAGCCCTGATTGAGCAGAAGGTGGAGCTCGAAGCAGACCTGCAGACCAAGGAGCAGGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 |
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| CDS GCA 90 bp | CTCTCGCGAAGCTTTCCGAGTTCAGCCCGCAGGCTGCCCATCTCCTaGTCCTTGGTCTGCAGGTCTGCTTCGAGCTCCACCTTCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSRSFPSSARRLPIS*SLVCRSASSSTFCS Trigger: TGAGCAGAAGGTGGAGCTCGAAGCAGACCTGCAGACCAAGGAGCAGGAGATGGGCAGCCTGCGGGCTGAACTCGGAAAGCTTCGCGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 ENSMUST00000199766.5 |
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| CDS CCA 90 bp | GCGATGGACTCGCAGCCGTGTTGGTCGATGACCCTCTCGAACTCGTaGCCCACGAGCGACGCGATATCGTACACATCCATGACGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AMDSQPCWSMTLSNS*PTSDAISYTSMTVS Trigger: GCTGACCGTCATGGATGTGTACGATATCGCGTCGCTCGTGGGCCACGAGTTCGAGAGGGTCATCGACCAACACGGCTGCGAGTCCATCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CCA 90 bp | CCATCTGGCTGCGGCTGGATCTTCTTTTCAGCTTCTCCCTGGAGGTaGAAGCCAGCCACCACCTGTTCCCCGAGCGAGCAAACGCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSGCGWIFFSASPWR*KPATTCSPSEQTRL Trigger: AAGGCGCGTTTGCTCGCTCGGGGAACAGGTGGTGGCTGGCTTCCACCTCCAGGGAGAAGCTGAAAAGAAGATCCAGCCGCAGCCAGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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| CDS-3UTR CAA 90 bp | TTTGAGGAACTGATGTTGAGGCGGCCGCCACCTAGAGCTGGTGGCAGGCAGTCCGGACTCGCAGCCGTGTaGGTCGATGACCCTCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: FEELMLRRPPPRAGGRQSGLAAV*VDDPLE Trigger: TTCGAGAGGGTCATCGACCAACACGGCTGCGAGTCC...GGACTGCCTGCCACCAGCTCTAGGTGGCGGCCGCCTCAACATCAGTTCCTCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CCA 90 bp | AGGTTGGTCATCAGCTGCTTATTCTCCTCCTGCAGCTGGGCAATCTaGGACAGGAGGTCCTGTGCTTCACCCCGCCACACGTCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RLVISCLFSSCSWAI*DRRSCASPRHTSST Trigger: GGTGGAGGACGTGTGGCGGGGTGAAGCACAGGACCTCCTGTCCCAGATTGCCCAGCTGCAGGAGGAGAATAAGCAGCTGATGACCAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CCA 90 bp | GCTTTCCCCTGGGCCTCAACCACGGTGACCCGGTGCCGAAGGTCATaGTTGATCTTCATTAGCCTCGTCTGCTGCTGCTGCAAAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AFPWASTTVTRCRRS*LIFISLVCCCCKAS Trigger: CGAGGCTTTGCAGCAGCAGCAGACGAGGCTAATGAAGATCAACCATGACCTTCGGCACCGGGTCACCGTGGTTGAGGCCCAGGGGAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CCA 90 bp | AGGTCTGCTTCGAGCTCCACCTTCTGCTCAATCAGGGCTTTCCCCTaGGCCTCAACCACGGTGACCCGGTGCCGAAGGTCATGGTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: RSASSSTFCSIRAFP*ASTTVTRCRRSWLI Trigger: GATCAACCATGACCTTCGGCACCGGGTCACCGTGGTTGAGGCCCAGGGGAAAGCCCTGATTGAGCAGAAGGTGGAGCTCGAAGCAGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 |
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| CDS-3UTR CAA 90 bp | TCACAGCAGATTCCAAGGCACACCATCTCGGACAGGCTTCTTGGGCCTCTAGCTGTGAACCTCGGGCGGTaGGGGTCCTTGAGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQQIPRHTISDRLLGPLAVNLGR*GSLRSR Trigger: CCTGGACCTCAAGGACCCCAACCGCCCGAGGTTCAC...AGCTAGAGGCCCAAGAAGCCTGTCCGAGATGGTGTGCCTTGGAATCTGCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS TCA 90 bp | CGGGCGGTTGGGGTCCTTGAGGTCCAGGGCGGCCTTCTCTGCATCTaGAATCGATTCCTCTCCATCTGGCTGCGGCTGGATCTTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAVGVLEVQGGLLCI*NRFLSIWLRLDLLF Trigger: GAAAAGAAGATCCAGCCGCAGCCAGATGGAGAGGAATCGATTTCAGATGCAGAGAAGGCCGCCCTGGACCTCAAGGACCCCAACCGCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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| CDS GCA 90 bp | CCTCCACCAGCTCCAGCTCCTTTTGATGCTTGCGCTCCTTTTCAATaGGGTCCATCCTCTCTACGCGCAACCGGTCCAGTTCCAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPPAPAPFDACAPFQ*GPSSLRATGPVPGA Trigger: TGCGCCTGGAACTGGACCGGTTGCGCGTAGAGAGGATGGACCGCATTGAAAAGGAGCGCAAGCATCAAAAGGAGCTGGAGCTGGTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS GCA 90 bp | TGCTCAATCAGGGCTTTCCCCTGGGCCTCAACCACGGTGACCCGGTaGCGAAGGTCATGGTTGATCTTCATTAGCCTCGTCTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSIRAFPWASTTVTR*RRSWLIFISLVCCC Trigger: GCAGCAGCAGACGAGGCTAATGAAGATCAACCATGACCTTCGGCACCGGGTCACCGTGGTTGAGGCCCAGGGGAAAGCCCTGATTGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 |
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| CDS-3UTR CAA 90 bp | GCTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGCCGAAGGTCATGGTaGATCTTCATTAGCCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGGRQSRQRYSHRCCRASCRRSW*IFISLV Trigger: GACGAGGCTAATGAAGATCAACCATGACCTTCGGCA...GGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
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| CDS-3UTR CAA 90 bp | CTGGTGGCAGGCAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTTGCAGCAGAAACACCTaGGACTTGAGCTCGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVAGSPGRGTVTGAAGLPCSRNT*DLSSFL Trigger: GAGGAACGAGCTCAAGTCCAAGGTGTTTCTGCTGCA...AGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTGCCTGCCACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| CDS GCA 90 bp | ACGTCCTTGTGGTTGAGGTTGGTCATCAGCTGCTTATTCTCCTCCTaGAGCTGGGCAATCTGGGACAGGAGGTCCTGTGCTTCACCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TSLWLRLVISCLFSS*SWAIWDRRSCASPR Trigger: GCGGGGTGAAGCACAGGACCTCCTGTCCCAGATTGCCCAGCTGCAGGAGGAGAATAAGCAGCTGATGACCAACCTCAACCACAAGGACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CCA 90 bp | TTGTGGTTGAGGTTGGTCATCAGCTGCTTATTCTCCTCCTGCAGCTaGGCAATCTGGGACAGGAGGTCCTGTGCTTCACCCCGCCACACG | + |
|
Preference number: 5 (lower is better) Translates to: LWLRLVISCLFSSCS*AIWDRRSCASPRHT Trigger: CGTGTGGCGGGGTGAAGCACAGGACCTCCTGTCCCAGATTGCCCAGCTGCAGGAGGAGAATAAGCAGCTGATGACCAACCTCAACCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | TTTGAGGAACTGATGTTGAGGCGGCCGCCACCTAGAGCTGGTGGCAGGCAGTCCTGCAGCAGAAACACCTaGGACTTGAGCTCGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FEELMLRRPPPRAGGRQSCSRNT*DLSSFL Trigger: GAGGAACGAGCTCAAGTCCAAGGTGTTTCTGCTGCA...GGACTGCCTGCCACCAGCTCTAGGTGGCGGCCGCCTCAACATCAGTTCCTCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000200202.2 |
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| CDS CCA 90 bp | CCTTCCTGCTTCTGGAACTCCTCCTCGGAGAAGCCCACGTCCTTGTaGTTGAGGTTGGTCATCAGCTGCTTATTCTCCTCCTGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSCFWNSSSEKPTSL*LRLVISCLFSSCSW Trigger: CCAGCTGCAGGAGGAGAATAAGCAGCTGATGACCAACCTCAACCACAAGGACGTGGGCTTCTCCGAGGAGGAGTTCCAGAAGCAGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | TCACAGCAGATTCCAAGGCACACCATCTCGGACAGGCTTCTTGGGCCTCTAGCTCCCACGTCCTTGTGGTaGAGGTTGGTCATCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQQIPRHTISDRLLGPLAPTSLW*RLVISC Trigger: GCAGCTGATGACCAACCTCAACCACAAGGACGTGGG...AGCTAGAGGCCCAAGAAGCCTGTCCGAGATGGTGTGCCTTGGAATCTGCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | CAGTCCAGGCAGAGGTACAGTCACAGGTGCTGCAGGGCTTCCTGTCCTTGCTCTAGAAACACCTTGGACTaGAGCTCGTTCCTCTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QSRQRYSHRCCRASCPCSRNTLD*SSFLSC Trigger: GCACGAGAGGAACGAGCTCAAGTCCAAGGTGTTTCT...AGAGCAAGGACAGGAAGCCCTGCAGCACCTGTGACTGTACCTCTGCCTGGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199125.2 ENSMUST00000200202.2 |
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| CDS GCA 90 bp | AGGGCGGCCTTCTCTGCATCTGAAATCGATTCCTCTCCATCTGGCTaGGGCTGGATCTTCTTTTCAGCTTCTCCCTGGAGGTGGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RAAFSASEIDSSPSG*GWIFFSASPWRWKP Trigger: TGGCTTCCACCTCCAGGGAGAAGCTGAAAAGAAGATCCAGCCGCAGCCAGATGGAGAGGAATCGATTTCAGATGCAGAGAAGGCCGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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| CDS-3UTR CAA 90 bp | GATAGTGGCGAAGTGTTCAGCTTAGAAAGCCTGTTAACTGAAATTAATGTGGTCGGGCGGTTGGGGTCCTaGAGGTCCAGGGCGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DSGEVFSLESLLTEINVVGRLGS*RSRAAF Trigger: GAAGGCCGCCCTGGACCTCAAGGACCCCAACCGCCC...GACCACATTAATTTCAGTTAACAGGCTTTCTAAGCTGAACACTTCGCCACTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | GATTCACGCTTCCTGTTATGTATAGCCTGCTACCTCCAGGGCAACTTCATGATAGTGGGTCTCTGCGTGTaGGCCAGGCGCTTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DSRFLLCIACYLQGNFMIVGLCV*ARRFLS Trigger: GGACAAGAAGCGCCTGGCCAACACGCAGAGACCCAC...TATCATGAAGTTGCCCTGGAGGTAGCAGGCTATACATAACAGGAAGCGTGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | CTCTGCTCCTCACCGACAAAGGCCGTAAGAAAACAAACAAAACCTAGGAGTCAACAGGGCTTCCTGTCCTaGCTCTGTGTACCCGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LCSSPTKAVRKQTKPRSQQGFLS*LCVPVI Trigger: GATGACGGGTACACAGAGCAAGGACAGGAAGCCCTG...TTGACTCCTAGGTTTTGTTTGTTTTCTTACGGCCTTTGTCGGTGAGGAGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CAA 90 bp | CCTCTAGCTTTATCAGAACAAAGTGTGACAGTCCTGTGGTTGTTTCTAGCGAGTAGCTCATCCCTCTGCTaGTCCACCACCTCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLALSEQSVTVLWLFLASSSSLC*STTSFS Trigger: GCTGAAGGAGGTGGTGGACAAGCAGAGGGATGAGCT...ACTCGCTAGAAACAACCACAGGACTGTCACACTTTGTTCTGATAAAGCTAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTCCTCACCGACAAAGGCCGTAAGAAAACAAACAAAACCTAGGAGTCAATTGGCCAGGCGCTTCTaGTCCCGGGAGAAAAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LCSSPTKAVRKQTKPRSQLARRF*SREKKL Trigger: TAGCTTTTTCTCCCGGGACAAGAAGCGCCTGGCCAA...TTGACTCCTAGGTTTTGTTTGTTTTCTTACGGCCTTTGTCGGTGAGGAGCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | TTTCAAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTAGGACCCTCACGACCTaGGGCATGAGGCGTGCGATG | + |
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Preference number: 5 (lower is better) Translates to: FQIWHQFFVISPQSRQFVRTLTT*GMRRAM Trigger: CATCGCACGCCTCATGCCCAAGGTCGTGAGGGTCCT...AACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | TTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTGAGGAACCAGCTCCAGCTCCTTTaGATGCTTGCGCTCCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: LASVFRHQSSKQTVRLRNQLQLL*MLALLF Trigger: GAAAAGGAGCGCAAGCATCAAAAGGAGCTGGAGCTG...GTTCCTCAAACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | GCCTCTAGCTTTATCAGAACAAAGTGTGACAGTCCTGTGGTTGTTTCTAGCGAGTGCCGAAGGTCATGGTaGATCTTCATTAGCCTCGTC | + |
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Preference number: 5 (lower is better) Translates to: ASSFIRTKCDSPVVVSSECRRSW*IFISLV Trigger: GACGAGGCTAATGAAGATCAACCATGACCTTCGGCA...CTCGCTAGAAACAACCACAGGACTGTCACACTTTGTTCTGATAAAGCTAGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | TGCTCCTCACCGACAAAGGCCGTAAGAAAACAAACAAAACCTAGGAGTCAAACATGCAGCAGAAACACCTaGGACTTGAGCTCGTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: CSSPTKAVRKQTKPRSQTCSRNT*DLSSFL Trigger: GAGGAACGAGCTCAAGTCCAAGGTGTTTCTGCTGCA...TGTTTGACTCCTAGGTTTTGTTTGTTTTCTTACGGCCTTTGTCGGTGAGGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | GTGGTCTGGTTTCATATCCTCATCTTATTAAATAGAGGTCCTAAGGGTTTCGAGAGAAACACCTTGGACTaGAGCTCGTTCCTCTCGTGC | + |
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Preference number: 5 (lower is better) Translates to: VVWFHILILLNRGPKGFERNTLD*SSFLSC Trigger: GCACGAGAGGAACGAGCTCAAGTCCAAGGTGTTTCT...CTCGAAACCCTTAGGACCTCTATTTAATAAGATGAGGATATGAAACCAGACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS-3UTR CAA 90 bp | TCAAATTTGGCATCAGTTTTTCGTCATCAGTCCTCAAAGCAGACAGTTCGTTTGAGAAACACCTTGGACTaGAGCTCGTTCCTCTCGTGC | + |
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Preference number: 5 (lower is better) Translates to: SNLASVFRHQSSKQTVRLRNTLD*SSFLSC Trigger: GCACGAGAGGAACGAGCTCAAGTCCAAGGTGTTTCT...CAAACGAACTGTCTGCTTTGAGGACTGATGACGAAAAACTGATGCCAAATTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000200202.2 |
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| CDS CAA 72 bp | ACGTCCCGCAGCTCCTGGAGCGTGAACCTCGGGCGGTaGGGGTCCTTGAGGTCCAGGGCGGCCTTCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: TSRSSWSVNLGR*GSLRSRAAFSA Trigger: TGCAGAGAAGGCCGCCCTGGACCTCAAGGACCCCAACCGCCCGAGGTTCACGCTCCAGGAGCTGCGGGACGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 ENSMUST00000199766.5 ENSMUST00000200202.2 |
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| CDS GCA 72 bp | TCCAGGCGCAGCTCGTCTAGCTCGGGAGCGACGTGGTaGCGGCTAACCAGCACCTCGAGGATCTCCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: SRRSSSSSGATW*RLTSTSRISRT Trigger: GGTCCTGGAGATCCTCGAGGTGCTGGTTAGCCGGCACCACGTCGCTCCCGAGCTAGACGAGCTGCGCCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CCA 72 bp | AGCTCGTTCCTCTCGTGCAGGACGTCCCGCAGCTCCTaGAGCGTGAACCTCGGGCGGTTGGGGTCCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSFLSCRTSRSS*SVNLGRLGSLR Trigger: CCTCAAGGACCCCAACCGCCCGAGGTTCACGCTCCAGGAGCTGCGGGACGTCCTGCACGAGAGGAACGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 ENSMUST00000199766.5 ENSMUST00000200202.2 |
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| CDS CCA 72 bp | AGTTCCAGGCGCAGCTCGTCTAGCTCGGGAGCGACGTaGTGCCGGCTAACCAGCACCTCGAGGATCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSRRSSSSSGAT*CRLTSTSRISR Trigger: CCTGGAGATCCTCGAGGTGCTGGTTAGCCGGCACCACGTCGCTCCCGAGCTAGACGAGCTGCGCCTGGAACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CAA 90 bp | CCTCACGACCTTGGGCATGAGGCGTGCGATGGACTCGCAGCCGTGTaGGTCGATGACCCTCTCGAACTCGTGGCCCACGAGCGACGCGAT | + |
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Preference number: 6 (lower is better) Translates to: PHDLGHEACDGLAAV*VDDPLELVAHERRD Trigger: ATCGCGTCGCTCGTGGGCCACGAGTTCGAGAGGGTCATCGACCAACACGGCTGCGAGTCCATCGCACGCCTCATGCCCAAGGTCGTGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CAA 90 bp | TCGTGCAGGACGTCCCGCAGCTCCTGGAGCGTGAACCTCGGGCGGTaGGGGTCCTTGAGGTCCAGGGCGGCCTTCTCTGCATCTGAAATC | + |
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Preference number: 6 (lower is better) Translates to: SCRTSRSSWSVNLGR*GSLRSRAAFSASEI Trigger: GATTTCAGATGCAGAGAAGGCCGCCCTGGACCTCAAGGACCCCAACCGCCCGAGGTTCACGCTCCAGGAGCTGCGGGACGTCCTGCACGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 ENSMUST00000199766.5 ENSMUST00000200202.2 |
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| CDS TCA 72 bp | CCTCGAGGATCTCCAGGACCCTCACGACCTTGGGCATaGGGCGTGCGATGGACTCGCAGCCGTGTTGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: PRGSPGPSRPWA*GVRWTRSRVGR Trigger: TCGACCAACACGGCTGCGAGTCCATCGCACGCCTCATGCCCAAGGTCGTGAGGGTCCTGGAGATCCTCGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CCA 72 bp | TTGGGCATGAGGCGTGCGATGGACTCGCAGCCGTGTTaGTCGATGACCCTCTCGAACTCGTGGCCCACGAGC | + |
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Preference number: 6 (lower is better) Translates to: LGMRRAMDSQPC*SMTLSNSWPTS Trigger: GCTCGTGGGCCACGAGTTCGAGAGGGTCATCGACCAACACGGCTGCGAGTCCATCGCACGCCTCATGCCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CAA 72 bp | CTTGGGCATGAGGCGTGCGATGGACTCGCAGCCGTGTaGGTCGATGACCCTCTCGAACTCGTGGCCCACGAG | + |
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Preference number: 6 (lower is better) Translates to: LGHEACDGLAAV*VDDPLELVAHE Trigger: CTCGTGGGCCACGAGTTCGAGAGGGTCATCGACCAACACGGCTGCGAGTCCATCGCACGCCTCATGCCCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CAA 90 bp | ACGTCCCGCAGCTCCTGGAGCGTGAACCTCGGGCGGTTGGGGTCCTaGAGGTCCAGGGCGGCCTTCTCTGCATCTGAAATCGATTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: TSRSSWSVNLGRLGS*RSRAAFSASEIDSS Trigger: AGAGGAATCGATTTCAGATGCAGAGAAGGCCGCCCTGGACCTCAAGGACCCCAACCGCCCGAGGTTCACGCTCCAGGAGCTGCGGGACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 ENSMUST00000199766.5 ENSMUST00000200202.2 |
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| CDS TCA 72 bp | CGTGGCCCACGAGCGACGCGATATCGTACACATCCATaGCGGTCAGCTCCGCCACGTTCTTCTCCAGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: RGPRATRYRTHP*RSAPPRSSPEP Trigger: CGGCTCTGGAGAAGAACGTGGCGGAGCTGACCGTCATGGATGTGTACGATATCGCGTCGCTCGTGGGCCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS GCA 72 bp | GATCTCCAGGACCCTCACGACCTTGGGCATGAGGCGTaGGATGGACTCGCAGCCGTGTTGGTCGATGACCCT | + |
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Preference number: 6 (lower is better) Translates to: DLQDPHDLGHEA*DGLAAVLVDDP Trigger: AGGGTCATCGACCAACACGGCTGCGAGTCCATCGCACGCCTCATGCCCAAGGTCGTGAGGGTCCTGGAGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS GCA 72 bp | AGCTTTCCGAGTTCAGCCCGCAGGCTGCCCATCTCCTaGTCCTTGGTCTGCAGGTCTGCTTCGAGCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: SFPSSARRLPIS*SLVCRSASSST Trigger: GGTGGAGCTCGAAGCAGACCTGCAGACCAAGGAGCAGGAGATGGGCAGCCTGCGGGCTGAACTCGGAAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 ENSMUST00000199766.5 |
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| CDS CCA 72 bp | TCGAGCTCCACCTTCTGCTCAATCAGGGCTTTCCCCTaGGCCTCAACCACGGTGACCCGGTGCCGAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSSTFCSIRAFP*ASTTVTRCRRS Trigger: TGACCTTCGGCACCGGGTCACCGTGGTTGAGGCCCAGGGGAAAGCCCTGATTGAGCAGAAGGTGGAGCTCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 |
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| CDS CCA 72 bp | GCTGTAAAGAGCAGTCGCTTGATCCCCGATTCAGGCTaGGGGGACGTCCTCGGGTGTGTAATGGGCGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: AVKSSRLIPDSG*GDVLGCVMGGG Trigger: GCCTCCGCCCATTACACACCCGAGGACGTCCCCCCAGCCTGAATCGGGGATCAAGCGACTGCTCTTTACAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199125.2 |
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| CDS CCA 72 bp | GGACCTTCTTTAAGTCGCTTGATCCCCGATTCAGGCTaGGGGGACGTCCTCGGGTGTGTAATGGGCGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GPSLSRLIPDSG*GDVLGCVMGGG Trigger: GCCTCCGCCCATTACACACCCGAGGACGTCCCCCCAGCCTGAATCGGGGATCAAGCGACTTAAAGAAGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199766.5 |
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| CDS CAA 90 bp | TTCCCCTGGGCCTCAACCACGGTGACCCGGTGCCGAAGGTCATGGTaGATCTTCATTAGCCTCGTCTGCTGCTGCTGCAAAGCCTCGACG | + |
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Preference number: 6 (lower is better) Translates to: FPWASTTVTRCRRSW*IFISLVCCCCKAST Trigger: CGTCGAGGCTTTGCAGCAGCAGCAGACGAGGCTAATGAAGATCAACCATGACCTTCGGCACCGGGTCACCGTGGTTGAGGCCCAGGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS TCA 72 bp | GGGGTCCTTGAGGTCCAGGGCGGCCTTCTCTGCATCTaGAATCGATTCCTCTCCATCTGGCTGCGGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: GVLEVQGGLLCI*NRFLSIWLRLD Trigger: ATCCAGCCGCAGCCAGATGGAGAGGAATCGATTTCAGATGCAGAGAAGGCCGCCCTGGACCTCAAGGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 ENSMUST00000199766.5 ENSMUST00000200202.2 |
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| CDS GCA 72 bp | CCCAGCTCCCTGTCTTTGGCTCGGAGCTCATCCCTCTaGTTGTCCACCACCTCCTTCAGCCTCTTCATCACC | + |
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Preference number: 6 (lower is better) Translates to: PSSLSLARSSSL*LSTTSFSLFIT Trigger: GGTGATGAAGAGGCTGAAGGAGGTGGTGGACAAGCAGAGGGATGAGCTCCGAGCCAAAGACAGGGAGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS GCA 72 bp | AGGGCTTTCCCCTGGGCCTCAACCACGGTGACCCGGTaGCGAAGGTCATGGTTGATCTTCATTAGCCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: RAFPWASTTVTR*RRSWLIFISLV Trigger: GACGAGGCTAATGAAGATCAACCATGACCTTCGGCACCGGGTCACCGTGGTTGAGGCCCAGGGGAAAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 |
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| CDS GCA 72 bp | TCCTTGGTCTGCAGGTCTGCTTCGAGCTCCACCTTCTaGTCAATCAGGGCTTTCCCCTGGGCCTCAACCACG | + |
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Preference number: 6 (lower is better) Translates to: SLVCRSASSSTF*SIRAFPWASTT Trigger: CGTGGTTGAGGCCCAGGGGAAAGCCCTGATTGAGCAGAAGGTGGAGCTCGAAGCAGACCTGCAGACCAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 |
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| CDS CCA 72 bp | TCGCAGCCGTGTTGGTCGATGACCCTCTCGAACTCGTaGCCCACGAGCGACGCGATATCGTACACATCCATG | + |
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Preference number: 6 (lower is better) Translates to: SQPCWSMTLSNS*PTSDAISYTSM Trigger: CATGGATGTGTACGATATCGCGTCGCTCGTGGGCCACGAGTTCGAGAGGGTCATCGACCAACACGGCTGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CCA 72 bp | ATCAGCTGCTTATTCTCCTCCTGCAGCTGGGCAATCTaGGACAGGAGGTCCTGTGCTTCACCCCGCCACACG | + |
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Preference number: 6 (lower is better) Translates to: ISCLFSSCSWAI*DRRSCASPRHT Trigger: CGTGTGGCGGGGTGAAGCACAGGACCTCCTGTCCCAGATTGCCCAGCTGCAGGAGGAGAATAAGCAGCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CCA 72 bp | TGGGCCTCAACCACGGTGACCCGGTGCCGAAGGTCATaGTTGATCTTCATTAGCCTCGTCTGCTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: WASTTVTRCRRS*LIFISLVCCCC Trigger: GCAGCAGCAGCAGACGAGGCTAATGAAGATCAACCATGACCTTCGGCACCGGGTCACCGTGGTTGAGGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062153.12 ENSMUST00000199125.2 |
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| CDS CAA 90 bp | GCCCACTGGCCAAAGGACTCGTGGATGTGTGTGGGTCTCTGCGTGTaGGCCAGGCGCTTCTTGTCCCGGGAGAAAAAGCTAAACCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: AHWPKDSWMCVGLCV*ARRFLSREKKLNPS Trigger: TGACGGGTTTAGCTTTTTCTCCCGGGACAAGAAGCGCCTGGCCAACACGCAGAGACCCACACACATCCACGAGTCCTTTGGCCAGTGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199766.5 |
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| CDS CAA 90 bp | TCCTGCTTCTGGAACTCCTCCTCGGAGAAGCCCACGTCCTTGTGGTaGAGGTTGGTCATCAGCTGCTTATTCTCCTCCTGCAGCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SCFWNSSSEKPTSLW*RLVISCLFSSCSWA Trigger: TGCCCAGCTGCAGGAGGAGAATAAGCAGCTGATGACCAACCTCAACCACAAGGACGTGGGCTTCTCCGAGGAGGAGTTCCAGAAGCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CAA 72 bp | TCCTCCTCGGAGAAGCCCACGTCCTTGTGGTTGAGGTaGGTCATCAGCTGCTTATTCTCCTCCTGCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSSEKPTSLWLR*VISCLFSSCSW Trigger: CCAGCTGCAGGAGGAGAATAAGCAGCTGATGACCAACCTCAACCACAAGGACGTGGGCTTCTCCGAGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CAA 72 bp | GCCTCAACCACGGTGACCCGGTGCCGAAGGTCATGGTaGATCTTCATTAGCCTCGTCTGCTGCTGCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: ASTTVTRCRRSW*IFISLVCCCCK Trigger: TTTGCAGCAGCAGCAGACGAGGCTAATGAAGATCAACCATGACCTTCGGCACCGGGTCACCGTGGTTGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CAA 90 bp | TTCTGGAACTCCTCCTCGGAGAAGCCCACGTCCTTGTGGTTGAGGTaGGTCATCAGCTGCTTATTCTCCTCCTGCAGCTGGGCAATCTGG | + |
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Preference number: 6 (lower is better) Translates to: FWNSSSEKPTSLWLR*VISCLFSSCSWAIW Trigger: CCAGATTGCCCAGCTGCAGGAGGAGAATAAGCAGCTGATGACCAACCTCAACCACAAGGACGTGGGCTTCTCCGAGGAGGAGTTCCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CAA 90 bp | ATGCCTTCCTGCTTCTGGAACTCCTCCTCGGAGAAGCCCACGTCCTaGTGGTTGAGGTTGGTCATCAGCTGCTTATTCTCCTCCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: MPSCFWNSSSEKPTS*WLRLVISCLFSSCS Trigger: GCTGCAGGAGGAGAATAAGCAGCTGATGACCAACCTCAACCACAAGGACGTGGGCTTCTCCGAGGAGGAGTTCCAGAAGCAGGAAGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CAA 90 bp | GACTCGTGGATGTGTGTGGGTCTCTGCGTGTTGGCCAGGCGCTTCTaGTCCCGGGAGAAAAAGCTAAACCCGTCACTCAAAGGACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: DSWMCVGLCVLARRF*SREKKLNPSLKGPS Trigger: AGAAGGTCCTTTGAGTGACGGGTTTAGCTTTTTCTCCCGGGACAAGAAGCGCCTGGCCAACACGCAGAGACCCACACACATCCACGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199766.5 |
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| CDS GCA 72 bp | GCTCCAGCTCCTTTTGATGCTTGCGCTCCTTTTCAATaGGGTCCATCCTCTCTACGCGCAACCGGTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: APAPFDACAPFQ*GPSSLRATGPV Trigger: AACTGGACCGGTTGCGCGTAGAGAGGATGGACCGCATTGAAAAGGAGCGCAAGCATCAAAAGGAGCTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CAA 72 bp | TGCTTCTGGAACTCCTCCTCGGAGAAGCCCACGTCCTaGTGGTTGAGGTTGGTCATCAGCTGCTTATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CFWNSSSEKPTS*WLRLVISCLFS Trigger: GGAGAATAAGCAGCTGATGACCAACCTCAACCACAAGGACGTGGGCTTCTCCGAGGAGGAGTTCCAGAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS GCA 72 bp | TGCCGAAGGTCATGGTTGATCTTCATTAGCCTCGTCTaGTGCTGCTGCAAAGCCTCGACGTCCTCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CRRSWLIFISLV*CCCKASTSSFF Trigger: GAAGAATGAGGACGTCGAGGCTTTGCAGCAGCAGCAGACGAGGCTAATGAAGATCAACCATGACCTTCGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062153.12 |
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| CDS CCA 72 bp | GCATCTGAAATCGATTCCTCTCCATCTGGCTGCGGCTaGATCTTCTTTTCAGCTTCTCCCTGGAGGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ASEIDSSPSGCG*IFFSASPWRWK Trigger: CTTCCACCTCCAGGGAGAAGCTGAAAAGAAGATCCAGCCGCAGCCAGATGGAGAGGAATCGATTTCAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200202.2 |
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