Pregenerated sensors for RIC8B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035620Ensembl transcript IDs: ENSMUST00000038523.15, ENSMUST00000095385.5, ENSMUST00000214693.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTaGCGAGTGAAGTCCCGTACTCTGTCCTGGTGCAATGGGATGTCT | + |
|
Preference number: 1 (lower is better) Translates to: AESSATRLPDLTRAA*RVKSRTLSWCNGMS Trigger: AGACATCCCATTGCACCAGGACAGAGTACGGGACTTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR GCA 90 bp | CCTGGTGCAATGGGATGTCTGCTTCTGCTTCTAGCCCCGCAACTCTaGCTAACTGCAGCTCTGTATGAATGCCTCAATGTTGCAGAAAAC | + |
|
Preference number: 1 (lower is better) Translates to: PGAMGCLLLLLAPQL*LTAALYECLNVAEN Trigger: GTTTTCTGCAACATTGAGGCATTCATACAGAGCTGCAGTTAGGCAGAGTTGCGGGGCTAGAAGCAGAAGCAGACATCCCATTGCACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR GCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACAGATCTGACCAGGGCTaGTTGCCGAGTGAAGTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: QNAHCGRNGTDGGPALRYRSDQG*LPSEVP Trigger: CGGGACTTCACTCGGCAAGCAGCCCTGGTCAGATCT...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR CAA 90 bp | CGCAGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTaGCCGAGTGAAGTCCCGTACTCTGTCCTGGTGCAATGGGATGTC | + |
|
Preference number: 2 (lower is better) Translates to: RRIFGNKTARSDQGC*PSEVPYSVLVQWDV Trigger: GACATCCCATTGCACCAGGACAGAGTACGGGACTTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTCAAGACTGCCAGATCTaGCCAGGGCTGCTTGCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: VSLGPCVCVRACVCVSTFQDCQI*PGLLAE Trigger: CTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTG...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR GCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGGGCTTACAGAACAGCTaGCTGGCTTTCGTTCAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PQNAHCGRNGTDGGPALRGLQNS*LAFVQS Trigger: TGACTGAACGAAAGCCAGGCAGCTGTTCTGTAAGCC...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACTCCCGTACTCTGTCCTaGTGCAATGGGATGTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: QNAHCGRNGTDGGPALRYSRTLS*CNGMSA Trigger: AGCAGACATCCCATTGCACCAGGACAGAGTACGGGA...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR GCA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGCAGCTCTGTATGAATaGCTCAATGTTGCAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: APGRWRDSEGAVDMGGWKAALYE*LNVAEN Trigger: GTTTTCTGCAACATTGAGGCATTCATACAGAGCTGC...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR GCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACCGTACTCTGTCCTGGTaGAATGGGATGTCTGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: QNAHCGRNGTDGGPALRYRTLSW*NGMSAS Trigger: AGAAGCAGACATCCCATTGCACCAGGACAGAGTACG...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR TCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGAACTGCAGCTCTGTATaGATGCCTCAATGTTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PQNAHCGRNGTDGGPALRNCSSV*MPQCCR Trigger: TCTGCAACATTGAGGCATTCATACAGAGCTGCAGTT...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR GCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAACTAGCCCCGCAACTCTaGCTAACTGCAGCTCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: RIFGNKTARSDQGCLPSELAPQL*LTAALY Trigger: ATACAGAGCTGCAGTTAGGCAGAGTTGCGGGGCTAG...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR GCA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTCTAGCCCCGCAACTCTaGCTAACTGCAGCTCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLLAPQL*LTAALY Trigger: ATACAGAGCTGCAGTTAGGCAGAGTTGCGGGGCTAG...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR CCA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTTCCCGTACTCTGTCCTaGTGCAATGGGATGTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: VSLGPCVCVRACVCVSTFSRTLS*CNGMSA Trigger: AGCAGACATCCCATTGCACCAGGACAGAGTACGGGA...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACATGCTGGATTCCCAATaGGTAAACCAGTTAATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: QNAHCGRNGTDGGPALRYMLDSQ*VNQLMC Trigger: ACACATTAACTGGTTTACTCATTGGGAATCCAGCAT...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACTGTATAAAACTGAAATaGAGGGTAGGGCTAGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: QNAHCGRNGTDGGPALRYCIKLK*RVGLGL Trigger: TAAGCCTAGCCCTACCCTTCATTTCAGTTTTATACA...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR GCA 90 bp | TATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAGCTGCCTGGCTTTAGATCTGACCAGGGCTaGTTGCCGAGTGAAGTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: YKTEMKGRARLTEQLPGFRSDQG*LPSEVP Trigger: CGGGACTTCACTCGGCAAGCAGCCCTGGTCAGATCT...AAAGCCAGGCAGCTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACCAAGACTGCCAGATCTaGCCAGGGCTGCTTGCCGAG | + |
|
Preference number: 2 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDQDCQI*PGLLAE Trigger: CTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTG...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR CAA 90 bp | TGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTaGTATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: WGHVCVCVRVCVFPH*YKTEMKGRARLTEQ Trigger: CTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATACAAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR TCA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTATGCTGGATTCCCAATaGGTAAACCAGTTAATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLMLDSQ*VNQLMC Trigger: ACACATTAACTGGTTTACTCATTGGGAATCCAGCAT...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR GCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACTTATGTACAAACGGGTaGTGTTGGCTCCCTACCCCC | + |
|
Preference number: 2 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDLCTNG*CWLPTP Trigger: GGGGGTAGGGAGCCAACAGCACCCGTTTGTACATAA...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACTCGTTCAGTCAGTGCTaGTCTAAGGAGTCACTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDSFSQC*SKESLA Trigger: GGCAAGTGACTCCTTAGATCAGCACTGACTGAACGA...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACGTGTACTTGGCACCCTaGGTGATACCTCAGAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDVYLAP*VIPQNA Trigger: TGCATTCTGAGGTATCACTCAGGGTGCCAAGTACAC...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACGCACGTGTAGCTGCCTaGACTAAACCATTACTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDARVAA*TKPLLL Trigger: TAGAAGTAATGGTTTAGTTCAGGCAGCTACACGTGC...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR GCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACGCAGCTCTGTATGAATaGCTCAATGTTGCAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDAALYE*LNVAEN Trigger: GTTTTCTGCAACATTGAGGCATTCATACAGAGCTGC...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR GCA 72 bp | GCTGCTTGCCGAGTGAAGTCCCGTACTCTGTCCTGGTaGAATGGGATGTCTGCTTCTGCTTCTAGCCCCGCA | + |
|
Preference number: 3 (lower is better) Translates to: AACRVKSRTLSW*NGMSASASSPA Trigger: TGCGGGGCTAGAAGCAGAAGCAGACATCCCATTGCACCAGGACAGAGTACGGGACTTCACTCGGCAAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR GCA 72 bp | GAACTCCCACTACTCGGGGAGCCCCATCCTCTCTGTTaGCTGGAGGATGAGTGTGTACTTGGCACCCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: ELPLLGEPHPLC*LEDECVLGTLS Trigger: ACTCAGGGTGCCAAGTACACACTCATCCTCCAGGCAACAGAGAGGATGGGGCTCCCCGAGTAGTGGGAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR CCA 72 bp | CAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATaGGTGGGTGGAAGGACACGCAGAATCTTCGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: QVAGETQKGQLT*VGGRTRRIFGN Trigger: GTTGCCGAAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR GCA 72 bp | TCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTaGCGAGTGAAGTCCCGTACTCTGTCCTGGTGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SATRLPDLTRAA*RVKSRTLSWCN Trigger: ATTGCACCAGGACAGAGTACGGGACTTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR GCA 72 bp | ATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTaGTTGCCGAGTGAAGTCCCGTACTCTGTCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: IFGNKTARSDQG*LPSEVPYSVLV Trigger: CACCAGGACAGAGTACGGGACTTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR CCA 72 bp | CTTGGCACCCTGAGTGATACCTCAGAATGCACACTGTaGACGCAACGGTACAGATGGTGGTCCAGCCCTACG | + |
|
Preference number: 3 (lower is better) Translates to: LGTLSDTSECTL*TQRYRWWSSPT Trigger: CGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGGTATCACTCAGGGTGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR CCA 72 bp | ACCTCAGAATGCACACTGTGGACGCAACGGTACAGATaGTGGTCCAGCCCTACGGTACTAGTAGTGTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSECTLWTQRYR*WSSPTVLVVFR Trigger: CCTGAACACTACTAGTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR CCA 72 bp | TCAGAATGCACACTGTGGACGCAACGGTACAGATGGTaGTCCAGCCCTACGGTACTAGTAGTGTTCAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SECTLWTQRYRW*SSPTVLVVFRN Trigger: GTTCCTGAACACTACTAGTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAACTGATAAAAGCCATATaGAGAGTGGAGCAGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: RIFGNKTARSDQGCLPSELIKAI*RVEQVM Trigger: CATCACCTGCTCCACTCTCAATATGGCTTTTATCAG...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR GCA 72 bp | ATGGGATGTCTGCTTCTGCTTCTAGCCCCGCAACTCTaGCTAACTGCAGCTCTGTATGAATGCCTCAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: MGCLLLLLAPQL*LTAALYECLNV Trigger: AACATTGAGGCATTCATACAGAGCTGCAGTTAGGCAGAGTTGCGGGGCTAGAAGCAGAAGCAGACATCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR TCA 72 bp | CACAGAGACCCCAGTTTAAAACATGTGACATACGAATaGCCTTTATGTACAAACGGGTGCTGTTGGCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HRDPSLKHVTYE*PLCTNGCCWLP Trigger: AGGGAGCCAACAGCACCCGTTTGTACATAAAGGTCATTCGTATGTCACATGTTTTAAACTGGGGTCTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR-3UTR CAA 90 bp | TATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAGCTGCCTGGCTTTCTGATAAAAGCCATATaGAGAGTGGAGCAGGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: YKTEMKGRARLTEQLPGFLIKAI*RVEQVM Trigger: CATCACCTGCTCCACTCTCAATATGGCTTTTATCAG...AAAGCCAGGCAGCTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGCAGCCAAGAGGCCCCTaGCCGCCAAGAGTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: APGRWRDSEGAVDMGGWKQPRGP*PPRVLQ Trigger: CTGCAGGACTCTTGGCGGCCAGGGGCCTCTTGGCTG...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGCAGCCAAGAGGCCCCTaGCCGCCAAGAGTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQNAHCGRNGTDGGPALRQPRGP*PPRVLQ Trigger: CTGCAGGACTCTTGGCGGCCAGGGGCCTCTTGGCTG...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGTCCAGGCAGGACACTTaGCATGTCGTTGGGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: APGRWRDSEGAVDMGGWKSRQDT*HVVGTS Trigger: GGAGGTCCCAACGACATGCCAAGTGTCCTGCCTGGA...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGTCAGTGTGCAAAAGTaGCAAGACGAAGAGCAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: APGRWRDSEGAVDMGGWKVSVQK*QDEEQA Trigger: CGCTTGCTCTTCGTCTTGTCACTTTTGCACACTGAC...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGATGGCGAAGGACAGCTaGCATGACACGAAACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: APGRWRDSEGAVDMGGWKMAKDS*HDTKLM Trigger: CATCAGTTTCGTGTCATGGCAGCTGTCCTTCGCCAT...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGAAGGACAGCTGCCATaGCACGAAACTGATGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: APGRWRDSEGAVDMGGWKEGQLP*HETDEN Trigger: ATTCTCATCAGTTTCGTGTCATGGCAGCTGTCCTTC...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTGTCTCTGGAGAGAATaGGGAGTACTTCCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQNAHCGRNGTDGGPALRCLWRE*GVLPGR Trigger: CCTGCCTGGAAGTACTCCGCATTCTCTCCAGAGACA...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTGGCCGCCAAGAGTCCTaGAGCGTTCCCATAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLGRQES*SVPIAS Trigger: ACTGGCTATGGGAACGCTGCAGGACTCTTGGCGGCC...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGGAATCGTCTGACTCGTaGAGCTTGGCTAGTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQNAHCGRNGTDGGPALRESSDS*SLASLS Trigger: GCTGAGACTAGCCAAGCTCCACGAGTCAGACGATTC...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACGCACTTTCCAAGATCTaGGTTAGCAGCGGGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QNAHCGRNGTDGGPALRYALSKI*VSSGSP Trigger: GGGACTCCCGCTGCTAACCCAGATCTTGGAAAGTGC...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGAGAGGAGGTCCATTATaGTCTATGGCCGACTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: APGRWRDSEGAVDMGGWKRGGPL*SMADSY Trigger: GTATGAGTCGGCCATAGACCATAATGGACCTCCTCT...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR CAA 72 bp | TTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTaGCCGAGTGAAGTCCCGTACTCTGTCCTGGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FGNKTARSDQGC*PSEVPYSVLVQ Trigger: TTGCACCAGGACAGAGTACGGGACTTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGATGGCGAAGGACAGCTaGCATGACACGAAACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PQNAHCGRNGTDGGPALRMAKDS*HDTKLM Trigger: CATCAGTTTCGTGTCATGGCAGCTGTCCTTCGCCAT...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTTCCAGGCAGGACACTTaGCATGTCGTTGGGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLSRQDT*HVVGTS Trigger: GGAGGTCCCAACGACATGCCAAGTGTCCTGCCTGGA...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGAATAACTGGGAACTCTaGCACCTTCTCCAAAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: APGRWRDSEGAVDMGGWKNNWEL*HLLQRI Trigger: GATTCTTTGGAGAAGGTGTCAGAGTTCCCAGTTATT...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGCTCATAGCGCAATTGTaGCCTGATGTCAGTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQNAHCGRNGTDGGPALRLIAQL*PDVSVQ Trigger: TTGCACACTGACATCAGGTCACAATTGCGCTATGAG...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGGAAGGACAGCTGCCATaGCACGAAACTGATGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PQNAHCGRNGTDGGPALREGQLP*HETDEN Trigger: ATTCTCATCAGTTTCGTGTCATGGCAGCTGTCCTTC...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACCCTCTCTATAGCTaGTTCCCTTATCAATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: APGRWRDSEGAVDMGGWKDPLYS*FPYQFS Trigger: AGAGAATTGATAAGGGAAGCAGCTATAGAGAGGGTC...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAAGCACTTTCCAAGATCTaGGTTAGCAGCGGGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RIFGNKTARSDQGCLPSEALSKI*VSSGSP Trigger: GGGACTCCCGCTGCTAACCCAGATCTTGGAAAGTGC...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGGTCCATTATGGTCTATaGCCGACTCATACTCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: PQNAHCGRNGTDGGPALRVHYGL*PTHTHR Trigger: CCGATGAGTATGAGTCGGCCATAGACCATAATGGAC...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGACAATTAGTAAACAATaGCGAAGGACAGCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: APGRWRDSEGAVDMGGWKTISKQ*RRTAAM Trigger: CATGGCAGCTGTCCTTCGCCATTGTTTACTAATTGT...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGAGAGTTGCTGCCTCTTaGGCTGTTTCTTCATGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQNAHCGRNGTDGGPALRRVAAS*AVSSWV Trigger: AACCCATGAAGAAACAGCCCAAGAGGCAGCAACTCT...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACGTGCCATCTGACTGTTaGACACGATGTTACACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QNAHCGRNGTDGGPALRYVPSDC*TRCYTD Trigger: GTCTGTGTAACATCGTGTTCAACAGTCAGATGGCAC...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACAGCGCAATTGTGACCTaGTGTCAGTGTGCAAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QNAHCGRNGTDGGPALRYSAIVT*CQCAKV Trigger: CACTTTTGCACACTGACATCAGGTCACAATTGCGCT...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGCATTGCTTAAAAGGTTaGCGGCATTACTGTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQNAHCGRNGTDGGPALRHCLKG*RHYCAA Trigger: AGCTGCACAGTAATGCCGTCAACCTTTTAAGCAATG...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACCTTATTTCTCACGGTTaGGCCGACTTCTGGTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: QNAHCGRNGTDGGPALRYLISHG*ADFWSI Trigger: AATCGACCAGAAGTCGGCTCAACCGTGAGAAATAAG...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAATGTCTCTGGAGAGAATaGGGAGTACTTCCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RIFGNKTARSDQGCLPSECLWRE*GVLPGR Trigger: CCTGCCTGGAAGTACTCCGCATTCTCTCCAGAGACA...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACGAGGTTACAGAGCTTTaGAGCGAGATTCAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QNAHCGRNGTDGGPALRYEVTEL*SEIQFQ Trigger: CTGGAACTGAATCTCGCTGCAAAGCTCTGTAACCTC...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGAGAATACTGGCTGAGTaGTTCCTCCAAAGGCGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PQNAHCGRNGTDGGPALRRILAE*FLQRRY Trigger: ATAACGCCTTTGGAGGAAGCACTCAGCCAGTATTCT...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACAGAGTTGCTGCCTCTTaGGCTGTTTCTTCATGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QNAHCGRNGTDGGPALRYRVAAS*AVSSWV Trigger: AACCCATGAAGAAACAGCCCAAGAGGCAGCAACTCT...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGAAATTGAGTAAAACGTaGATGGCCTCCATATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: APGRWRDSEGAVDMGGWKKLSKT*MASIFM Trigger: CATGAATATGGAGGCCATTCACGTTTTACTCAATTT...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACGACCTGATGTCAGTGTaGAAAAGTGACAAGACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QNAHCGRNGTDGGPALRYDLMSV*KSDKTK Trigger: CTTCGTCTTGTCACTTTTGCACACTGACATCAGGTC...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACTCGATGACAGAATACTaGCTGAGTGCTTCCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QNAHCGRNGTDGGPALRYSMTEY*LSASSK Trigger: TTTGGAGGAAGCACTCAGCCAGTATTCTGTCATCGA...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTGTCAGTGTGCAAAAGTaGCAAGACGAAGAGCAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSLGPCVCVRACVCVSTFVSVQK*QDEEQA Trigger: CGCTTGCTCTTCGTCTTGTCACTTTTGCACACTGAC...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGATTCTGTTAATAAGCTaGGAACTGGAGTTAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQNAHCGRNGTDGGPALRILLIS*ELELDP Trigger: AGGGTCTAACTCCAGTTCTCAGCTTATTAACAGAAT...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTCTTATTTCTCACGGTTaGGCCGACTTCTGGTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLLISHG*ADFWSI Trigger: AATCGACCAGAAGTCGGCTCAACCGTGAGAAATAAG...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAAAACTCAGCAGCAATCTaGTTGACTCCGAGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: RIFGNKTARSDQGCLPSENSAAI*LTPRST Trigger: TGTTGACCTCGGAGTCAAGCAGATTGCTGCTGAGTT...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAAAGAGGAGGTCCATTATaGTCTATGGCCGACTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: RIFGNKTARSDQGCLPSERGGPL*SMADSY Trigger: GTATGAGTCGGCCATAGACCATAATGGACCTCCTCT...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR CAA 72 bp | GACATACGAATGACCTTTATGTACAAACGGGTGCTGTaGGCTCCCTACCCCCAGCACAGGCCACAAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DIRMTFMYKRVL*APYPQHRPQKN Trigger: GTTCTTTTGTGGCCTGTGCTGGGGGTAGGGAGCCAACAGCACCCGTTTGTACATAAAGGTCATTCGTATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTAGCTGCTGTGCCATCTaGCTGTTGAACACGATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VSLGPCVCVRACVCVSTFSCCAI*LLNTML Trigger: TAACATCGTGTTCAACAGTCAGATGGCACAGCAGCT...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAACATTGCTTAAAAGGTTaGCGGCATTACTGTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RIFGNKTARSDQGCLPSEHCLKG*RHYCAA Trigger: AGCTGCACAGTAATGCCGTCAACCTTTTAAGCAATG...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACAAAGGCGGTAAAACCTaGTCTTTGAGAAATTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QNAHCGRNGTDGGPALRYKGGKT*SLRNFR Trigger: CCGAAAATTTCTCAAAGATCAGGTTTTACCGCCTTT...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTGGTCAACATGTGTCATaGGACGAACCAGCTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLGQHVS*DEPAYF Trigger: GAAATAAGCTGGTTCGTCTCATGACACATGTTGACC...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTGAGGTTACAGAGCTTTaGAGCGAGATTCAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLGPCVCVRACVCVSTFEVTEL*SEIQFQ Trigger: CTGGAACTGAATCTCGCTGCAAAGCTCTGTAACCTC...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTGACCTGATGTCAGTGTaGAAAAGTGACAAGACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLDLMSV*KSDKTK Trigger: CTTCGTCTTGTCACTTTTGCACACTGACATCAGGTC...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTAACTCAGCAGCAATCTaGTTGACTCCGAGGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VSLGPCVCVRACVCVSTFNSAAI*LTPRST Trigger: TGTTGACCTCGGAGTCAAGCAGATTGCTGCTGAGTT...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAAAGAATACTGGCTGAGTaGTTCCTCCAAAGGCGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RIFGNKTARSDQGCLPSERILAE*FLQRRY Trigger: ATAACGCCTTTGGAGGAAGCACTCAGCCAGTATTCT...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTGCCATTGTATACCATaGTACTGTTTTTCAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQNAHCGRNGTDGGPALRCHCIP*YCFSKL Trigger: CAGCTTTGAAAAACAGTACCATGGTATACAATGGCA...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTTTTCGGATGTTCCGATaGGCTCGGGAACATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLGPCVCVRACVCVSTFFRMFR*AREHSV Trigger: AACAGAATGTTCCCGAGCCCATCGGAACATCCGAAA...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTTCGATGACAGAATACTaGCTGAGTGCTTCCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLSMTEY*LSASSK Trigger: TTTGGAGGAAGCACTCAGCCAGTATTCTGTCATCGA...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAAAATAACTGGGAACTCTaGCACCTTCTCCAAAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: RIFGNKTARSDQGCLPSENNWEL*HLLQRI Trigger: GATTCTTTGGAGAAGGTGTCAGAGTTCCCAGTTATT...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAAGACCCTCTCTATAGCTaGTTCCCTTATCAATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIFGNKTARSDQGCLPSEDPLYS*FPYQFS Trigger: AGAGAATTGATAAGGGAAGCAGCTATAGAGAGGGTC...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACGGCCGCCAAGAGTCCTaGAGCGTTCCCATAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDGRQES*SVPIAS Trigger: ACTGGCTATGGGAACGCTGCAGGACTCTTGGCGGCC...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAACCGTTGTTTTATCACTaGGCAGTTCATCTAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RIFGNKTARSDQGCLPSEPLFYH*AVHLEL Trigger: CAACTCTAGATGAACTGCCCAGTGATAAAACAACGG...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTTGGCCTCCATATTCATaGCATTGTATACCATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VSLGPCVCVRACVCVSTFWPPYS*HCIPWY Trigger: GTACCATGGTATACAATGGCATGAATATGGAGGCCA...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAAAGATCTTTTTGTCTCTaGAGAGAATGCGGAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: RIFGNKTARSDQGCLPSERSFCL*RECGVL Trigger: AAGTACTCCGCATTCTCTCCAGAGACAAAAAGATCT...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTACAATTAGTAAACAATaGCGAAGGACAGCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VSLGPCVCVRACVCVSTFTISKQ*RRTAAM Trigger: CATGGCAGCTGTCCTTCGCCATTGTTTACTAATTGT...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAAGTAAAACCTGATCTTTaGGAAATTTTCGGATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RIFGNKTARSDQGCLPSEVKPDL*EIFGCS Trigger: GGAACATCCGAAAATTTCTCAAAGATCAGGTTTTAC...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTAAAGGCGGTAAAACCTaGTCTTTGAGAAATTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLGPCVCVRACVCVSTFKGGKT*SLRNFR Trigger: CCGAAAATTTCTCAAAGATCAGGTTTTACCGCCTTT...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | TATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAGCTGCCTGGCTTTCAGGCTAAGCTGCTGTaGCATCTGACTGTTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: YKTEMKGRARLTEQLPGFQAKLL*HLTVEH Trigger: GTGTTCAACAGTCAGATGGCACAGCAGCTTAGCCTG...AAAGCCAGGCAGCTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAATGCCATTGTATACCATaGTACTGTTTTTCAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RIFGNKTARSDQGCLPSECHCIP*YCFSKL Trigger: CAGCTTTGAAAAACAGTACCATGGTATACAATGGCA...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | TATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAGCTGCCTGGCTTTGTGCCATCTGACTGTTaGACACGATGTTACACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YKTEMKGRARLTEQLPGFVPSDC*TRCYTD Trigger: GTCTGTGTAACATCGTGTTCAACAGTCAGATGGCAC...AAAGCCAGGCAGCTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| 3UTR CAA 72 bp | GTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTaGTATAAAACTGAAATGAAGGGTAGGGCTAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVRVCVFPH*YKTEMKGRARL Trigger: AAGCCTAGCCCTACCCTTCATTTCAGTTTTATACAAATGTGGAAACACACACACACGCACGCACACACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR GCA 90 bp | TATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAGCTGCCTGGCTTTGAATCGCTCTCTTTATaGACCTTCCAACTGTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: YKTEMKGRARLTEQLPGFESLSL*TFQLST Trigger: GGTAGACAGTTGGAAGGTGCATAAAGAGAGCGATTC...AAAGCCAGGCAGCTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACCTCATAGCGCAATTGTaGCCTGATGTCAGTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDLIAQL*PDVSVQ Trigger: TTGCACACTGACATCAGGTCACAATTGCGCTATGAG...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACGTCCATTATGGTCTATaGCCGACTCATACTCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDVHYGL*PTHTHR Trigger: CCGATGAGTATGAGTCGGCCATAGACCATAATGGAC...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACTTTCGGATGTTCCGATaGGCTCGGGAACATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDFRMFR*AREHSV Trigger: AACAGAATGTTCCCGAGCCCATCGGAACATCCGAAA...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACGGTCAACATGTGTCATaGGACGAACCAGCTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDGQHVS*DEPAYF Trigger: GAAATAAGCTGGTTCGTCTCATGACACATGTTGACC...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | TATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAGCTGCCTGGCTTTAGATCTTTTTGTCTCTaGAGAGAATGCGGAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: YKTEMKGRARLTEQLPGFRSFCL*RECGVL Trigger: AAGTACTCCGCATTCTCTCCAGAGACAAAAAGATCT...AAAGCCAGGCAGCTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | TATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAGCTGCCTGGCTTTGTAAAACCTGATCTTTaGGAAATTTTCGGATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YKTEMKGRARLTEQLPGFVKPDL*EIFGCS Trigger: GGAACATCCGAAAATTTCTCAAAGATCAGGTTTTAC...AAAGCCAGGCAGCTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | TATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAGCTGCCTGGCTTTGTTTATCAAGCATGTTaGCAAGTTTCATGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YKTEMKGRARLTEQLPGFVYQAC*QVSWLH Trigger: ATGAAGCCATGAAACTTGTCAACATGCTTGATAAAC...AAAGCCAGGCAGCTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038523.15 |
||
| CDS-3UTR GCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACTGGCCTCCATATTCATaGCATTGTATACCATGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDWPPYS*HCIPWY Trigger: GTACCATGGTATACAATGGCATGAATATGGAGGCCA...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACCCGTTGTTTTATCACTaGGCAGTTCATCTAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDPLFYH*AVHLEL Trigger: CAACTCTAGATGAACTGCCCAGTGATAAAACAACGG...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR TCA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACATTCTGTTAATAAGCTaGGAACTGGAGTTAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDILLIS*ELELDP Trigger: AGGGTCTAACTCCAGTTCTCAGCTTATTAACAGAAT...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGACATTGAACAGAGCTTaGAGGGCCTCAATGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: APGRWRDSEGAVDMGGWKTLNRA*RASMAQ Trigger: CTGTGCCATTGAGGCCCTCAAAGCTCTGTTCAATGT...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGCTTATTTCTCACGGTaGAGCCGACTTCTGGTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: APGRWRDSEGAVDMGGWKAYFSR*SRLLVD Trigger: ATCGACCAGAAGTCGGCTCAACCGTGAGAAATAAGC...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGTGCAGCTCTTCGGTTTaGTCTTCAGTTGGACCTACA | + |
|
Preference number: 5 (lower is better) Translates to: APGRWRDSEGAVDMGGWKCSSSV*SSVGPT Trigger: TGTAGGTCCAACTGAAGACAAAACCGAAGAGCTGCA...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGGAACTAAGATCTTTTaGTCTCTGGAGAGAATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: APGRWRDSEGAVDMGGWKGTKIF*SLERMR Trigger: CCGCATTCTCTCCAGAGACAAAAAGATCTTAGTTCC...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGACATTGCTTAAAAGGTaGACGGCATTACTGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: APGRWRDSEGAVDMGGWKTLLKR*TALLCS Trigger: GCTGCACAGTAATGCCGTCAACCTTTTAAGCAATGT...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTCAGCAGCAATCTGCTaGACTCCGAGGTCAACATGT | + |
|
Preference number: 5 (lower is better) Translates to: PQNAHCGRNGTDGGPALRSAAIC*TPRSTC Trigger: ACATGTTGACCTCGGAGTCAAGCAGATTGCTGCTGA...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTTTCCAGGCAGGACACTaGGCATGTCGTTGGGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSLGPCVCVRACVCVSTFFQAGH*ACRWDL Trigger: GAGGTCCCAACGACATGCCAAGTGTCCTGCCTGGAA...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | CAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTACACATTGAACAGAGCTTaGAGGGCCTCAATGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QNAHCGRNGTDGGPALRYTLNRA*RASMAQ Trigger: CTGTGCCATTGAGGCCCTCAAAGCTCTGTTCAATGT...GTACCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTGCAGCTCTTCGGTTTaGTCTTCAGTTGGACCTACA | + |
|
Preference number: 5 (lower is better) Translates to: PQNAHCGRNGTDGGPALRCSSSV*SSVGPT Trigger: TGTAGGTCCAACTGAAGACAAAACCGAAGAGCTGCA...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS TCA 90 bp | GGGTTAGCAGCGGGAGTCCCTGGAGCTCATAGCGCAATTGTGACCTaGTGTCAGTGTGCAAAAGTGACAAGACGAAGAGCAAGCGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLAAGVPGAHSAIVT*CQCAKVTRRRASAS Trigger: ACTTGCGCTTGCTCTTCGTCTTGTCACTTTTGCACACTGACATCAGGTCACAATTGCGCTATGAGCTCCAGGGACTCCCGCTGCTAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAACTGTCTACCGTCACATaGAACAGAGCTTTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RIFGNKTARSDQGCLPSELSTVT*NRALRA Trigger: GGCCCTCAAAGCTCTGTTCAATGTGACGGTAGACAG...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGGTCGCTGGAGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGTCCATATTCATGCCATaGTATACCATGGTACTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: APGRWRDSEGAVDMGGWKSIFMP*YTMVLF Trigger: AAACAGTACCATGGTATACAATGGCATGAATATGGA...CTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCTCCAGCGACCTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTGTCGTTGGGACCTCCTaGACAAGGACCTTAAATATG | + |
|
Preference number: 5 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLVVGTS*TRTLNM Trigger: CATATTTAAGGTCCTTGTCAAGGAGGTCCCAACGAC...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAATACTCATCGGTCCACTaGATGCTAAAGGCACTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RIFGNKTARSDQGCLPSEYSSVH*MLKALS Trigger: GGAAAGTGCCTTTAGCATCAAGTGGACCGATGAGTA...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTTACTCATCGGTCCACTaGATGCTAAAGGCACTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLYSSVH*MLKALS Trigger: GGAAAGTGCCTTTAGCATCAAGTGGACCGATGAGTA...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGCGGTTTTGTCTTCAGTaGGACCTACAATTAGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PQNAHCGRNGTDGGPALRRFCLQ*DLQLVN Trigger: GTTTACTAATTGTAGGTCCAACTGAAGACAAAACCG...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTTCAGCAGCAATCTGCTaGACTCCGAGGTCAACATGT | + |
|
Preference number: 5 (lower is better) Translates to: VSLGPCVCVRACVCVSTFSAAIC*TPRSTC Trigger: ACATGTTGACCTCGGAGTCAAGCAGATTGCTGCTGA...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTTTGGTTTTGCGTTTTaGTATTCTTCAGTGTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PQNAHCGRNGTDGGPALRFGFAF*YSSVSV Trigger: CACGGACACTGAAGAATACAAAAACGCAAAACCAAA...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTACATTGCTTAAAAGGTaGACGGCATTACTGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLTLLKR*TALLCS Trigger: GCTGCACAGTAATGCCGTCAACCTTTTAAGCAATGT...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTCAAGAGACTGGAACATaGCTTAAAAGGTTGACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLQETGT*LKRLTA Trigger: TGCCGTCAACCTTTTAAGCAATGTTCCAGTCTCTTG...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | AGAATCTTCGGCAACAAGACTGCCAGATCTGACCAGGGCTGCTTGCCGAGTGAACAAGAGACTGGAACATaGCTTAAAAGGTTGACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RIFGNKTARSDQGCLPSEQETGT*LKRLTA Trigger: TGCCGTCAACCTTTTAAGCAATGTTCCAGTCTCTTG...TTCACTCGGCAAGCAGCCCTGGTCAGATCTGGCAGTCTTGTTGCCGAAGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | CCTCAGAATGCACACTGTGGACGCAACGGTACAGATGGTGGTCCAGCCCTACGGTCCATATTCATGCCATaGTATACCATGGTACTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PQNAHCGRNGTDGGPALRSIFMP*YTMVLF Trigger: AAACAGTACCATGGTATACAATGGCATGAATATGGA...CCGTAGGGCTGGACCACCATCTGTACCGTTGCGTCCACAGTGTGCATTCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CCA 90 bp | TTTTTGTCTCTGGAGAGAATGCGGAGTACTTCCAGGCAGGACACTTaGCATGTCGTTGGGACCTCCTTGACAAGGACCTTAAATATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLSLERMRSTSRQDT*HVVGTSLTRTLNMP Trigger: AGGCATATTTAAGGTCCTTGTCAAGGAGGTCCCAACGACATGCCAAGTGTCCTGCCTGGAAGTACTCCGCATTCTCTCCAGAGACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | AGAGACTCAGAAGGGGCAGTTGACATGGGTGGGTGGAAGGACACGCAGAATCTTATAAATTTTCGGTCCTaGCACTTCCTTAGGAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RDSEGAVDMGGWKDTQNLINFRS*HFLRRL Trigger: TAACCTCCTAAGGAAGTGCAAGGACCGAAAATTTAT...AAGATTCTGCGTGTCCTTCCACCCACCCATGTCAACTGCCCCTTCTGAGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS TCA 90 bp | AGCTTTGCAGCGAGATTCAGTTCCAGGCTAAGCTGCTGTGCCATCTaGCTGTTGAACACGATGTTACACAGACACTTCAATGATTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SFAARFSSRLSCCAI*LLNTMLHRHFNDST Trigger: TGTGGAATCATTGAAGTGTCTGTGTAACATCGTGTTCAACAGTCAGATGGCACAGCAGCTTAGCCTGGAACTGAATCTCGCTGCAAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | GTAAGTCTGGGGCCATGTGTGTGTGTGCGTGCGTGTGTGTGTGTTTCCACATTTTCTGCTGATTCAAATTaGAAAGTAGCCCTATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSLGPCVCVRACVCVSTFSADSN*KVALCL Trigger: CAAGCATAGGGCTACTTTCAAATTTGAATCAGCAGA...AAATGTGGAAACACACACACACGCACGCACACACACACATGGCCCCAGACTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | TATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAGCTGCCTGGCTTTGCAGTTCATCTAGAGTaGCTGCCTCTTGGGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: YKTEMKGRARLTEQLPGFAVHLE*LPLGLF Trigger: AAACAGCCCAAGAGGCAGCAACTCTAGATGAACTGC...AAAGCCAGGCAGCTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS TCA 90 bp | CAGTTGGACCTACAATTAGTAAACAATGGCGAAGGACAGCTGCCATaGCACGAAACTGATGAGAATCGCTCTCTTTATGCACCTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: QLDLQLVNNGEGQLP*HETDENRSLYAPSN Trigger: GTTGGAAGGTGCATAAAGAGAGCGATTCTCATCAGTTTCGTGTCATGGCAGCTGTCCTTCGCCATTGTTTACTAATTGTAGGTCCAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | TATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAGCTGCCTGGCTTTGTCGTTGGGACCTCCTaGACAAGGACCTTAAATATG | + |
|
Preference number: 5 (lower is better) Translates to: YKTEMKGRARLTEQLPGFVVGTS*TRTLNM Trigger: CATATTTAAGGTCCTTGTCAAGGAGGTCCCAACGAC...AAAGCCAGGCAGCTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS TCA 90 bp | ATTTTCGGATGTTCCGATGGGCTCGGGAACATTCTGTTAATAAGCTaGGAACTGGAGTTAGACCCTCTCTATAGCTGCTTCCCTTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: IFGCSDGLGNILLIS*ELELDPLYSCFPYQ Trigger: TTGATAAGGGAAGCAGCTATAGAGAGGGTCTAACTCCAGTTCTCAGCTTATTAACAGAATGTTCCCGAGCCCATCGGAACATCCGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACGCAGTTCATCTAGAGTaGCTGCCTCTTGGGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDAVHLE*LPLGLF Trigger: AAACAGCCCAAGAGGCAGCAACTCTAGATGAACTGC...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CCA 90 bp | ATAACTGGGAACTCTGACACCTTCTCCAAAGAATCGTCTGACTCGTaGAGCTTGGCTAGTCTCAGCAGTATTTGCATATTTTCCTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ITGNSDTFSKESSDS*SLASLSSICIFSLV Trigger: AACTAAGGAAAATATGCAAATACTGCTGAGACTAGCCAAGCTCCACGAGTCAGACGATTCTTTGGAGAAGGTGTCAGAGTTCCCAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CCA 90 bp | TCCGTTGTTTTATCACTGGGCAGTTCATCTAGAGTTGCTGCCTCTTaGGCTGTTTCTTCATGGGTTAATGGACAAATGAGAACATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVVLSLGSSSRVAAS*AVSSWVNGQMRTSK Trigger: TTTGGATGTTCTCATTTGTCCATTAACCCATGAAGAAACAGCCCAAGAGGCAGCAACTCTAGATGAACTGCCCAGTGATAAAACAACGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS CCA 90 bp | TGGTACTGTTTTTCAAAGCTGTGTCTTTCTCCGTTGTTTTATCACTaGGCAGTTCATCTAGAGTTGCTGCCTCTTGGGCTGTTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WYCFSKLCLSPLFYH*AVHLELLPLGLFLH Trigger: ATGAAGAAACAGCCCAAGAGGCAGCAACTCTAGATGAACTGCCCAGTGATAAAACAACGGAGAAAGACACAGCTTTGAAAAACAGTACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS TCA 90 bp | CAGTTGGACCTACAATTAGTAAACAATGGCGAAGGACAGCTGCCATaGCACGAAACTGATGAGAATCGCTCTTTCTTTTATCTTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLDLQLVNNGEGQLP*HETDENRSFFYLHL Trigger: CAGATGAAGATAAAAGAAAGAGCGATTCTCATCAGTTTCGTGTCATGGCAGCTGTCCTTCGCCATTGTTTACTAATTGTAGGTCCAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214693.2 |
||
| CDS-3UTR CAA 90 bp | TATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAGCTGCCTGGCTTTTCTGCTGATTCAAATTaGAAAGTAGCCCTATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YKTEMKGRARLTEQLPGFSADSN*KVALCL Trigger: CAAGCATAGGGCTACTTTCAAATTTGAATCAGCAGA...AAAGCCAGGCAGCTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACGGAACTAAGATCTTTTaGTCTCTGGAGAGAATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDGTKIF*SLERMR Trigger: CCGCATTCTCTCCAGAGACAAAAAGATCTTAGTTCC...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | TATAAAACTGAAATGAAGGGTAGGGCTAGGCTTACAGAACAGCTGCCTGGCTTTCGGTTTTGTCTTCAGTaGGACCTACAATTAGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: YKTEMKGRARLTEQLPGFRFCLQ*DLQLVN Trigger: GTTTACTAATTGTAGGTCCAACTGAAGACAAAACCG...AAAGCCAGGCAGCTGTTCTGTAAGCCTAGCCCTACCCTTCATTTCAGTTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS TCA 90 bp | GACACGAAACTGATGAGAATCGCTCTTTCTTTTATCTTCATCTGCTaGTTCAAATTTGAAAGTAGCCCTATGCTTGTCGCTGTAATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DTKLMRIALSFIFIC*FKFESSPMLVAVIP Trigger: AGGGATTACAGCGACAAGCATAGGGCTACTTTCAAATTTGAATCAGCAGATGAAGATAAAAGAAAGAGCGATTCTCATCAGTTTCGTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214693.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACTTTGGTTTTGCGTTTTaGTATTCTTCAGTGTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDFGFAF*YSSVSV Trigger: CACGGACACTGAAGAATACAAAAACGCAAAACCAAA...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS GCA 90 bp | AAAGAATCGTCTGACTCGTGGAGCTTGGCTAGTCTCAGCAGTATTTaGATATTTTCCTTAGTTGTTACAGGAACTAAGATCTTTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KESSDSWSLASLSSI*IFSLVVTGTKIFLS Trigger: AGACAAAAAGATCTTAGTTCCTGTAACAACTAAGGAAAATATGCAAATACTGCTGAGACTAGCCAAGCTCCACGAGTCAGACGATTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS-3UTR CAA 90 bp | AAGGTAGAACACACACACAAATACACACAGAGACCCCAGTTTAAAACATGTGACAGTTTATCAAGCATGTaGACAAGTTTCATGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KVEHTHKYTQRPQFKTCDSLSSM*TSFMAS Trigger: TGAAGCCATGAAACTTGTCAACATGCTTGATAAACT...GTCACATGTTTTAAACTGGGGTCTCTGTGTGTATTTGTGTGTGTGTTCTACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038523.15 |
||
| CDS TCA 90 bp | CTGCTTCCCTTATCAATTCTCTTCTCCATAAAATTGAGTAAAACGTaGATGGCCTCCATATTCATGCCATTGTATACCATGGTACTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLPLSILFSIKLSKT*MASIFMPLYTMVLF Trigger: AAACAGTACCATGGTATACAATGGCATGAATATGGAGGCCATTCACGTTTTACTCAATTTTATGGAGAAGAGAATTGATAAGGGAAGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS CCA 72 bp | CTGGAGAGAATGCGGAGTACTTCCAGGCAGGACACTTaGCATGTCGTTGGGACCTCCTTGACAAGGACCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LERMRSTSRQDT*HVVGTSLTRTL Trigger: TAAGGTCCTTGTCAAGGAGGTCCCAACGACATGCCAAGTGTCCTGCCTGGAAGTACTCCGCATTCTCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CAA 72 bp | TCTGGAGAGAATGCGGAGTACTTCCAGGCAGGACACTaGGCATGTCGTTGGGACCTCCTTGACAAGGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SGENAEYFQAGH*ACRWDLLDKDL Trigger: AAGGTCCTTGTCAAGGAGGTCCCAACGACATGCCAAGTGTCCTGCCTGGAAGTACTCCGCATTCTCTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CCA 72 bp | TCTGTGTCCGAGCTGGTCTCTTCGATGACAGAATACTaGCTGAGTGCTTCCTCCAAAGGCGTTATTGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SVSELVSSMTEY*LSASSKGVIVP Trigger: CGGGACAATAACGCCTTTGGAGGAAGCACTCAGCCAGTATTCTGTCATCGAAGAGACCAGCTCGGACACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CAA 90 bp | GGAGGTCCATTATGGTCTATGGCCGACTCATACTCATCGGTCCACTaGATGCTAAAGGCACTTTCCAAGATCTGGGTTAGCAGCGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGPLWSMADSYSSVH*MLKALSKIWVSSGS Trigger: ACTCCCGCTGCTAACCCAGATCTTGGAAAGTGCCTTTAGCATCAAGTGGACCGATGAGTATGAGTCGGCCATAGACCATAATGGACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS GCA 72 bp | CGAGCTGGTCTCTTCGATGACAGAATACTGGCTGAGTaGTTCCTCCAAAGGCGTTATTGTCCCGTCAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RAGLFDDRILAE*FLQRRYCPVRF Trigger: AAACCTGACGGGACAATAACGCCTTTGGAGGAAGCACTCAGCCAGTATTCTGTCATCGAAGAGACCAGCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CAA 90 bp | CTTTTTGTCTCTGGAGAGAATGCGGAGTACTTCCAGGCAGGACACTaGGCATGTCGTTGGGACCTCCTTGACAAGGACCTTAAATATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LFVSGENAEYFQAGH*ACRWDLLDKDLKYA Trigger: GGCATATTTAAGGTCCTTGTCAAGGAGGTCCCAACGACATGCCAAGTGTCCTGCCTGGAAGTACTCCGCATTCTCTCCAGAGACAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CAA 72 bp | CTCTCTTTATGCACCTTCCAACTGTCTACCGTCACATaGAACAGAGCTTTGAGGGCCTCAATGGCACAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSLCTFQLSTVT*NRALRASMAQS Trigger: AGACTGTGCCATTGAGGCCCTCAAAGCTCTGTTCAATGTGACGGTAGACAGTTGGAAGGTGCATAAAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS TCA 72 bp | GCGAGATTCAGTTCCAGGCTAAGCTGCTGTGCCATCTaGCTGTTGAACACGATGTTACACAGACACTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: ARFSSRLSCCAI*LLNTMLHRHFN Trigger: ATTGAAGTGTCTGTGTAACATCGTGTTCAACAGTCAGATGGCACAGCAGCTTAGCCTGGAACTGAATCTCGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS TCA 72 bp | GTTTTTGTATTCTTCAGTGTCCGTGTCCTCGTCCTCTaGGTACCAATTATCTCCTCTTCCTCCAGCCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VFVFFSVRVLVL*VPIISSSSSQE Trigger: CTCTTGGCTGGAGGAAGAGGAGATAATTGGTACTCAGAGGACGAGGACACGGACACTGAAGAATACAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CAA 72 bp | TTATGGTCTATGGCCGACTCATACTCATCGGTCCACTaGATGCTAAAGGCACTTTCCAAGATCTGGGTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LWSMADSYSSVH*MLKALSKIWVS Trigger: GCTAACCCAGATCTTGGAAAGTGCCTTTAGCATCAAGTGGACCGATGAGTATGAGTCGGCCATAGACCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS TCA 72 bp | ATGTGTCATGAGACGAACCAGCTTATTTCTCACGGTTaGGCCGACTTCTGGTCGATTTGTCACATCTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: MCHETNQLISHG*ADFWSICHISQ Trigger: TTGAGAGATGTGACAAATCGACCAGAAGTCGGCTCAACCGTGAGAAATAAGCTGGTTCGTCTCATGACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS CCA 72 bp | TTTTCAAAGCTGTGTCTTTCTCCGTTGTTTTATCACTaGGCAGTTCATCTAGAGTTGCTGCCTCTTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FSKLCLSPLFYH*AVHLELLPLGL Trigger: CAGCCCAAGAGGCAGCAACTCTAGATGAACTGCCCAGTGATAAAACAACGGAGAAAGACACAGCTTTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS CAA 72 bp | CGGCATTACTGTGCAGCTCTTCGGTTTTGTCTTCAGTaGGACCTACAATTAGTAAACAATGGCGAAGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: RHYCAALRFCLQ*DLQLVNNGEGQ Trigger: CTGTCCTTCGCCATTGTTTACTAATTGTAGGTCCAACTGAAGACAAAACCGAAGAGCTGCACAGTAATGCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS CAA 72 bp | TCTCCGTTGTTTTATCACTGGGCAGTTCATCTAGAGTaGCTGCCTCTTGGGCTGTTTCTTCATGGGTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: SPLFYHWAVHLE*LPLGLFLHGLM Trigger: CATTAACCCATGAAGAAACAGCCCAAGAGGCAGCAACTCTAGATGAACTGCCCAGTGATAAAACAACGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS CAA 72 bp | GCTTATTTCTCACGGTTGAGCCGACTTCTGGTCGATTaGTCACATCTCTCAAAGGCGGTAAAACCTGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: AYFSRLSRLLVD*SHLSKAVKPDL Trigger: AAGATCAGGTTTTACCGCCTTTGAGAGATGTGACAAATCGACCAGAAGTCGGCTCAACCGTGAGAAATAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS CAA 90 bp | GGGAACTCTGACACCTTCTCCAAAGAATCGTCTGACTCGTGGAGCTaGGCTAGTCTCAGCAGTATTTGCATATTTTCCTTAGTTGTTACA | + |
|
Preference number: 6 (lower is better) Translates to: GNSDTFSKESSDSWS*ASLSSICIFSLVVT Trigger: TGTAACAACTAAGGAAAATATGCAAATACTGCTGAGACTAGCCAAGCTCCACGAGTCAGACGATTCTTTGGAGAAGGTGTCAGAGTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CCA 72 bp | AACTCTGACACCTTCTCCAAAGAATCGTCTGACTCGTaGAGCTTGGCTAGTCTCAGCAGTATTTGCATATTT | + |
|
Preference number: 6 (lower is better) Translates to: NSDTFSKESSDS*SLASLSSICIF Trigger: AAATATGCAAATACTGCTGAGACTAGCCAAGCTCCACGAGTCAGACGATTCTTTGGAGAAGGTGTCAGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CAA 72 bp | GACACCTTCTCCAAAGAATCGTCTGACTCGTGGAGCTaGGCTAGTCTCAGCAGTATTTGCATATTTTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: DTFSKESSDSWS*ASLSSICIFSL Trigger: TAAGGAAAATATGCAAATACTGCTGAGACTAGCCAAGCTCCACGAGTCAGACGATTCTTTGGAGAAGGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CAA 90 bp | AGTGACAAGACGAAGAGCAAGCGCAAGTCAAAGCACTTTATGTCATaGATAAATTTTCGGTCCTTGCACTTCCTTAGGAGGTTACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SDKTKSKRKSKHFMS*INFRSLHFLRRLQS Trigger: GCTCTGTAACCTCCTAAGGAAGTGCAAGGACCGAAAATTTATCAATGACATAAAGTGCTTTGACTTGCGCTTGCTCTTCGTCTTGTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS TCA 72 bp | CTACAATTAGTAAACAATGGCGAAGGACAGCTGCCATaGCACGAAACTGATGAGAATCGCTCTCTTTATGCA | + |
|
Preference number: 6 (lower is better) Translates to: LQLVNNGEGQLP*HETDENRSLYA Trigger: TGCATAAAGAGAGCGATTCTCATCAGTTTCGTGTCATGGCAGCTGTCCTTCGCCATTGTTTACTAATTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS TCA 72 bp | CATCCAAACAAGAGACTGGAACATTGCTTAAAAGGTTaGCGGCATTACTGTGCAGCTCTTCGGTTTTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HPNKRLEHCLKG*RHYCAALRFCL Trigger: AAGACAAAACCGAAGAGCTGCACAGTAATGCCGTCAACCTTTTAAGCAATGTTCCAGTCTCTTGTTTGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS CAA 72 bp | ACGAAGAGCAAGCGCAAGTCAAAGCACTTTATGTCATaGATAAATTTTCGGTCCTTGCACTTCCTTAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TKSKRKSKHFMS*INFRSLHFLRR Trigger: CCTCCTAAGGAAGTGCAAGGACCGAAAATTTATCAATGACATAAAGTGCTTTGACTTGCGCTTGCTCTTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CAA 72 bp | ACATCCAAACAAGAGACTGGAACATTGCTTAAAAGGTaGACGGCATTACTGTGCAGCTCTTCGGTTTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSKQETGTLLKR*TALLCSSSVLS Trigger: AGACAAAACCGAAGAGCTGCACAGTAATGCCGTCAACCTTTTAAGCAATGTTCCAGTCTCTTGTTTGGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS CAA 72 bp | GGACAAATGAGAACATCCAAACAAGAGACTGGAACATaGCTTAAAAGGTTGACGGCATTACTGTGCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GQMRTSKQETGT*LKRLTALLCSS Trigger: AGAGCTGCACAGTAATGCCGTCAACCTTTTAAGCAATGTTCCAGTCTCTTGTTTGGATGTTCTCATTTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS CAA 90 bp | AAGCGCAAGTCAAAGCACTTTATGTCATTGATAAATTTTCGGTCCTaGCACTTCCTTAGGAGGTTACAGAGCTTTGCAGCGAGATTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KRKSKHFMSLINFRS*HFLRRLQSFAARFS Trigger: ACTGAATCTCGCTGCAAAGCTCTGTAACCTCCTAAGGAAGTGCAAGGACCGAAAATTTATCAATGACATAAAGTGCTTTGACTTGCGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CAA 90 bp | TGGGTTAATGGACAAATGAGAACATCCAAACAAGAGACTGGAACATaGCTTAAAAGGTTGACGGCATTACTGTGCAGCTCTTCGGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: WVNGQMRTSKQETGT*LKRLTALLCSSSVL Trigger: CAAAACCGAAGAGCTGCACAGTAATGCCGTCAACCTTTTAAGCAATGTTCCAGTCTCTTGTTTGGATGTTCTCATTTGTCCATTAACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS TCA 72 bp | CCTCTTGGGCTGTTTCTTCATGGGTTAATGGACAAATaGGAACATCCAAACAAGAGACTGGAACATTGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: PLGLFLHGLMDK*EHPNKRLEHCL Trigger: TAAGCAATGTTCCAGTCTCTTGTTTGGATGTTCTCATTTGTCCATTAACCCATGAAGAAACAGCCCAAGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS GCA 72 bp | TCTGACTCGTGGAGCTTGGCTAGTCTCAGCAGTATTTaGATATTTTCCTTAGTTGTTACAGGAACTAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: SDSWSLASLSSI*IFSLVVTGTKI Trigger: GATCTTAGTTCCTGTAACAACTAAGGAAAATATGCAAATACTGCTGAGACTAGCCAAGCTCCACGAGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CAA 72 bp | TCAAAGCACTTTATGTCATTGATAAATTTTCGGTCCTaGCACTTCCTTAGGAGGTTACAGAGCTTTGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SKHFMSLINFRS*HFLRRLQSFAA Trigger: CGCTGCAAAGCTCTGTAACCTCCTAAGGAAGTGCAAGGACCGAAAATTTATCAATGACATAAAGTGCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS CAA 72 bp | AAAAGGTTGACGGCATTACTGTGCAGCTCTTCGGTTTaGTCTTCAGTTGGACCTACAATTAGTAAACAATGG | + |
|
Preference number: 6 (lower is better) Translates to: KRLTALLCSSSV*SSVGPTISKQW Trigger: CCATTGTTTACTAATTGTAGGTCCAACTGAAGACAAAACCGAAGAGCTGCACAGTAATGCCGTCAACCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 ENSMUST00000214693.2 |
||
| CDS CAA 90 bp | AGTATTTGCATATTTTCCTTAGTTGTTACAGGAACTAAGATCTTTTaGTCTCTGGAGAGAATGCGGAGTACTTCCAGGCAGGACACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SICIFSLVVTGTKIF*SLERMRSTSRQDTW Trigger: CCAAGTGTCCTGCCTGGAAGTACTCCGCATTCTCTCCAGAGACAAAAAGATCTTAGTTCCTGTAACAACTAAGGAAAATATGCAAATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||
| CDS TCA 72 bp | CTACAATTAGTAAACAATGGCGAAGGACAGCTGCCATaGCACGAAACTGATGAGAATCGCTCTTTCTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LQLVNNGEGQLP*HETDENRSFFY Trigger: ATAAAAGAAAGAGCGATTCTCATCAGTTTCGTGTCATGGCAGCTGTCCTTCGCCATTGTTTACTAATTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214693.2 |
||
| CDS CAA 72 bp | ATATTTTCCTTAGTTGTTACAGGAACTAAGATCTTTTaGTCTCTGGAGAGAATGCGGAGTACTTCCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IFSLVVTGTKIF*SLERMRSTSRQ Trigger: CTGCCTGGAAGTACTCCGCATTCTCTCCAGAGACAAAAAGATCTTAGTTCCTGTAACAACTAAGGAAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038523.15 ENSMUST00000095385.5 |
||