Pregenerated sensors for RIC8A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025485Ensembl transcript IDs: ENSMUST00000026558.7, ENSMUST00000209766.2, ENSMUST00000210708.2
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGATCCTTCGTGGAGCTCCAGGGCCAGAAGCACATCCAAACACTTaGGGGGCAAGTTCCCCAGGAGATTCACCGTGTGGCCGTGGAACT | + |
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Preference number: 1 (lower is better) Translates to: RILRGAPGPEAHPNT*GASSPGDSPCGRGT Trigger: AGTTCCACGGCCACACGGTGAATCTCCTGGGGAACTTGCCCCTCAAGTGTTTGGATGTGCTTCTGGCCCTGGAGCTCCACGAAGGATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR GCA 90 bp | TTCTGCAGTCCCTGGAGAATACCCATGTCCTTCAGAATCCCCATCTaGCCAGCCCTCCCTGAGCCACTTCCCGCCACACTACCCAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: FCSPWRIPMSFRIPI*PALPEPLPATLPRF Trigger: AAACCTGGGTAGTGTGGCGGGAAGTGGCTCAGGGAGGGCTGGGCAGATGGGGATTCTGAAGGACATGGGTATTCTCCAGGGACTGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
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| 3UTR CCA 90 bp | AAAGAGCACTTTGAGGATCTCCATGGCCCTCTCCGTCTCTTGGGCTaGAAGCATCACCGGAGGGTTTTCTTTGGGGGCCACGCCCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: KEHFEDLHGPLRLLG*KHHRRVFFGGHAQC Trigger: ACACTGGGCGTGGCCCCCAAAGAAAACCCTCCGGTGATGCTTCCAGCCCAAGAGACGGAGAGGGCCATGGAGATCCTCAAAGTGCTCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR TCA 90 bp | GGAACTCGGCAGCTACTCTCTTCACATCTGTATCCAGGTGTGTCATaGGGCGGACAAGCTTGTTTCGAAGCAGGTCCCCCACCTCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: GTRQLLSSHLYPGVS*GGQACFEAGPPPQA Trigger: GGCCTGAGGTGGGGGACCTGCTTCGAAACAAGCTTGTCCGCCTCATGACACACCTGGATACAGATGTGAAGAGAGTAGCTGCCGAGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR TCA 90 bp | TGGGTGTTCTCCTCCTGGATGACAGGACGGAGCCCATTTGTCCCTTaGCTTACTCTCGTGTTCACTCAGGCTCCTCTTCTGCAGTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: WVFSSWMTGRSPFVP*LTLVFTQAPLLQSL Trigger: CAGGGACTGCAGAAGAGGAGCCTGAGTGAACACGAGAGTAAGTCAAGGGACAAATGGGCTCCGTCCTGTCATCCAGGAGGAGAACACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
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| 3UTR CCA 90 bp | ATATTAAAGAGCACTTTGAGGATCTCCATGGCCCTCTCCGTCTCTTaGGCTGGAAGCATCACCGGAGGGTTTTCTTTGGGGGCCACGCCC | + |
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Preference number: 1 (lower is better) Translates to: ILKSTLRISMALSVS*AGSITGGFSLGATP Trigger: GGGCGTGGCCCCCAAAGAAAACCCTCCGGTGATGCTTCCAGCCCAAGAGACGGAGAGGGCCATGGAGATCCTCAAAGTGCTCTTTAATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR CCA 90 bp | GTTGTCACAACTAGTGAGGCTTGGGTATGCGGATACTGCAGTGGGTaGCAGCGCCAGGACCAAAAAGTTAAGAAGAGGCCACTAGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: VVTTSEAWVCGYCSG*QRQDQKVKKRPLAL Trigger: CAGGGCTAGTGGCCTCTTCTTAACTTTTTGGTCCTGGCGCTGCCACCCACTGCAGTATCCGCATACCCAAGCCTCACTAGTTGTGACAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR CCA 90 bp | CTTGACTTACTCTCGTGTTCACTCAGGCTCCTCTTCTGCAGTCCCTaGAGAATACCCATGTCCTTCAGAATCCCCATCTGCCCAGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: LDLLSCSLRLLFCSP*RIPMSFRIPICPAL Trigger: GAGGGCTGGGCAGATGGGGATTCTGAAGGACATGGGTATTCTCCAGGGACTGCAGAAGAGGAGCCTGAGTGAACACGAGAGTAAGTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
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| 3UTR CCA 90 bp | CACGTTTACAAACATGAACCAGACCACAACATGTGGCCTGGACAGTaGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGGGATGTCTA | + |
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Preference number: 1 (lower is better) Translates to: HVYKHEPDHNMWPGQ*SSEAAFGKADQGCL Trigger: TAGACATCCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGTAAACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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| 3UTR TCA 90 bp | AGCAAGACTTCATGCCTGAAGACAGCTCCAACACGTTTACAAACATaGACCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGC | + |
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Preference number: 1 (lower is better) Translates to: SKTSCLKTAPTRLQT*TRPQHVAWTVVLRG Trigger: GCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGTAAACGTGTTGGAGCTGTCTTCAGGCATGAAGTCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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| 3UTR GCA 90 bp | TCTGGGCTGGCATCCAGCCCAGTCATGCTTACACCATGTGTACCCTaGTCCATTACCACCCTCATACACGCATGTTCATTTATGTGCCAG | + |
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Preference number: 1 (lower is better) Translates to: SGLASSPVMLTPCVP*SITTLIHACSFMCQ Trigger: CTGGCACATAAATGAACATGCGTGTATGAGGGTGGTAATGGAGCAGGGTACACATGGTGTAAGCATGACTGGGCTGGATGCCAGCCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR TCA 90 bp | CTCGTGGCTGCAGCCACATCCAAGAAACAACTTCACTTGTGGAAATaGAAGGTGGGTTCCCCGTCTTCACAGAGGGTAAGACTACCACAG | + |
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Preference number: 1 (lower is better) Translates to: LVAAATSKKQLHLWK*KVGSPSSQRVRLPQ Trigger: CTGTGGTAGTCTTACCCTCTGTGAAGACGGGGAACCCACCTTTCATTTCCACAAGTGAAGTTGTTTCTTGGATGTGGCTGCAGCCACGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR GCA 90 bp | GTGGTTGTGACTGAGTTAGTTGTCACAACTAGTGAGGCTTGGGTATaGGGATACTGCAGTGGGTGGCAGCGCCAGGACCAAAAAGTTAAG | + |
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Preference number: 1 (lower is better) Translates to: VVVTELVVTTSEAWV*GYCSGWQRQDQKVK Trigger: CTTAACTTTTTGGTCCTGGCGCTGCCACCCACTGCAGTATCCGCATACCCAAGCCTCACTAGTTGTGACAACTAACTCAGTCACAACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR GCA 90 bp | CATTTGTCCCTTGACTTACTCTCGTGTTCACTCAGGCTCCTCTTCTaGAGTCCCTGGAGAATACCCATGTCCTTCAGAATCCCCATCTGC | + |
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Preference number: 1 (lower is better) Translates to: HLSLDLLSCSLRLLF*SPWRIPMSFRIPIC Trigger: GCAGATGGGGATTCTGAAGGACATGGGTATTCTCCAGGGACTGCAGAAGAGGAGCCTGAGTGAACACGAGAGTAAGTCAAGGGACAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
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| 3UTR CCA 90 bp | ATTCTAAAATGTTTGAAACACAGCGTATGCCCCACATACGGGCTCTaGGCTGGCATCCAGCCCAGTCATGCTTACACCATGTGTACCCTG | + |
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Preference number: 1 (lower is better) Translates to: ILKCLKHSVCPTYGL*AGIQPSHAYTMCTL Trigger: CAGGGTACACATGGTGTAAGCATGACTGGGCTGGATGCCAGCCCAGAGCCCGTATGTGGGGCATACGCTGTGTTTCAAACATTTTAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR CCA 90 bp | CTGATCACATCCATGTTAACTCCCATGAACTCTAAGGATCCTTCGTaGAGCTCCAGGGCCAGAAGCACATCCAAACACTTGAGGGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: LITSMLTPMNSKDPS*SSRARSTSKHLRGK Trigger: CTTGCCCCTCAAGTGTTTGGATGTGCTTCTGGCCCTGGAGCTCCACGAAGGATCCTTAGAGTTCATGGGAGTTAACATGGATGTGATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR GCA 90 bp | AGCTTGTCAAACATGTTCACTAGCTTCATGGCCTCATGTTCCTTCTaGTCCTCTGTCATGCCTTCCATAGGATTAGGCGGCTTCTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: SLSNMFTSFMASCSF*SSVMPSIGLGGFSS Trigger: GGAGGAGAAGCCGCCTAATCCTATGGAAGGCATGACAGAGGAGCAGAAGGAACATGAGGCCATGAAGCTAGTGAACATGTTTGACAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR CCA 90 bp | GACCTCTTGTCTGTTCTAGCTGGATGGACAGGACAGATAAGACTATaGCTTCTTCACCTGGGGAAGTCACACAGCAGATCATCCTATGTC | + |
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Preference number: 1 (lower is better) Translates to: DLLSVLAGWTGQIRL*LLHLGKSHSRSSYV Trigger: GACATAGGATGATCTGCTGTGTGACTTCCCCAGGTGAAGAAGCCATAGTCTTATCTGTCCTGTCCATCCAGCTAGAACAGACAAGAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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| 3UTR GCA 90 bp | CTTAAACAATTTCAACAGATTCTAAAATGTTTGAAACACAGCGTATaGCCCACATACGGGCTCTGGGCTGGCATCCAGCCCAGTCATGCT | + |
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Preference number: 1 (lower is better) Translates to: LKQFQQILKCLKHSV*PTYGLWAGIQPSHA Trigger: AGCATGACTGGGCTGGATGCCAGCCCAGAGCCCGTATGTGGGGCATACGCTGTGTTTCAAACATTTTAGAATCTGTTGAAATTGTTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR TCA 90 bp | CTTGTCCCAAACTCTCCTGTATTCTGTGCCTCAGAATCTCAGATTTaGCTTTGTCTTACTTTCGCCTTCACAGAATTACTAAGCCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: LVPNSPVFCASESQI*LCLTFAFTELLSQW Trigger: CCACTGGCTTAGTAATTCTGTGAAGGCGAAAGTAAGACAAAGTCAAATCTGAGATTCTGAGGCACAGAATACAGGAGAGTTTGGGACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR GCA 90 bp | ACTACTTCACATACACAGTCTTGTCCCAAACTCTCCTGTATTCTGTaGCTCAGAATCTCAGATTTGACTTTGTCTTACTTTCGCCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: TTSHTQSCPKLSCIL*LRISDLTLSYFRLH Trigger: GTGAAGGCGAAAGTAAGACAAAGTCAAATCTGAGATTCTGAGGCACAGAATACAGGAGAGTTTGGGACAAGACTGTGTATGTGAAGTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR CAA 90 bp | CAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTaGGAAAGGCTGACCAGGGATGTCTACCCTTGGGGCCCCTCCATG | + |
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Preference number: 2 (lower is better) Translates to: QTTTCGLDSGPPRLP*ERLTRDVYPWGPSM Trigger: CATGGAGGGGCCCCAAGGGTAGACATCCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGCCGTGGAACTCCTCTGTGCGGTCCCCAGCAGCTTCAACCATCACGCAGTAAGCAGCACCAGTTCTaGAGGGGAGCAAGGCCGCTG | + |
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Preference number: 2 (lower is better) Translates to: CGRGTPLCGPQQLQPSRSKQHQF*RGARPL Trigger: CAGCGGCCTTGCTCCCCTTCAGAACTGGTGCTGCTT...ACTGCGTGATGGTTGAAGCTGCTGGGGACCGCACAGAGGAGTTCCACGGCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCCGTGGAACTCCTCTGTGCGGTCCCCAGCAGCTTCAACCATCACGCAGTGAAGGGCTCCCCAGCTaGAGAGGGGTGTGGCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: CGRGTPLCGPQQLQPSRSEGLPS*RGVWLL Trigger: AAGAAGCCACACCCCTCTCCAGCTGGGGAGCCCTTC...ACTGCGTGATGGTTGAAGCTGCTGGGGACCGCACAGAGGAGTTCCACGGCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCTGTGTGCAGTCATTACTAAGCACAGGCTGCCTCCTCCTCGGCGCCTACAGGGGTGTGGCTTCTTaGGGCAGCACCCCAGGACAT | + |
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Preference number: 2 (lower is better) Translates to: LSCVQSLLSTGCLLLGAYRGVAS*GSTPGH Trigger: ATGTCCTGGGGTGCTGCCTCAAGAAGCCACACCCCT...GTAGGCGCCGAGGAGGAGGCAGCCTGTGCTTAGTAATGACTGCACACAGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTTCTTGAGGCAGCACCCCAGGACATGTCTGGAAGCAGCACCAGTTCTGAAGAGGGGTGTGGCTTCTTaGGGCAGCACCCCAGGACAT | + |
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Preference number: 2 (lower is better) Translates to: GFLRQHPRTCLEAAPVLKRGVAS*GSTPGH Trigger: ATGTCCTGGGGTGCTGCCTCAAGAAGCCACACCCCT...CTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGGGTGCTGCCTCAAGAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR-3UTR TCA 90 bp | TACTCTCGTGTTCACTCAGGCTCCTCTTCTGCAGTCCCTGGAGAATACCCATGTCTGCCCAGCCCTCCCTaGGCCACTTCCCGCCACACT | + |
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Preference number: 2 (lower is better) Translates to: YSRVHSGSSSAVPGEYPCLPSPP*ATSRHT Trigger: AGTGTGGCGGGAAGTGGCTCAGGGAGGGCTGGGCAG...ACATGGGTATTCTCCAGGGACTGCAGAAGAGGAGCCTGAGTGAACACGAGAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGGCTGCCTCCTCCTCGGCGCCTACTCAGAAACAGTTCAGGCTGTTTGCCACGTGGAACTCCTCTGTaGGGTCCCCAGCAGCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: HRLPPPRRLLRNSSGCLPRGTPL*GPQQLQ Trigger: TTGAAGCTGCTGGGGACCGCACAGAGGAGTTCCACG...TGGCAAACAGCCTGAACTGTTTCTGAGTAGGCGCCGAGGAGGAGGCAGCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGGTGGCAGCGCCAGGACCAAAAAGTTAAGAAGAGGCCACTAGCCCTGTGCAGCTGGAGAGGGGTGTaGCTTCTTGAGGCAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: SGWQRQDQKVKKRPLALCSWRGV*LLEAAP Trigger: GGGTGCTGCCTCAAGAAGCCACACCCCTCTCCAGCT...GCACAGGGCTAGTGGCCTCTTCTTAACTTTTTGGTCCTGGCGCTGCCACCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGCAGCGCCAGGACCAAAAAGTTAAGAAGAGGCCACTAGCCCTGTGCTCAATACGGGCTCTGGGCTaGCATCCAGCCCAGTCATGC | + |
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Preference number: 2 (lower is better) Translates to: GWQRQDQKVKKRPLALCSIRALG*HPAQSC Trigger: GCATGACTGGGCTGGATGCCAGCCCAGAGCCCGTAT...TGAGCACAGGGCTAGTGGCCTCTTCTTAACTTTTTGGTCCTGGCGCTGCCACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR CAA 90 bp | TCCATAGGATTAGGCGGCTTCTCCTCCACCCTTCCAGTCACAGGGTaGATGCTGGCCTTGGCTTCCCTGTACTCCTCTGTGTCCGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SIGLGGFSSTLPVTG*MLALASLYSSVSVS Trigger: GGACACGGACACAGAGGAGTACAGGGAAGCCAAGGCCAGCATCAACCCTGTGACTGGAAGGGTGGAGGAGAAGCCGCCTAATCCTATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR-3UTR CCA 90 bp | GTCATTACTAAGCACAGGCTGCCTCCTCCTCGGCGCCTACTCAGAAACAGTTCACCCACATACGGGCTCTaGGCTGGCATCCAGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: VITKHRLPPPRRLLRNSSPTYGL*AGIQPS Trigger: ACTGGGCTGGATGCCAGCCCAGAGCCCGTATGTGGG...TGAACTGTTTCTGAGTAGGCGCCGAGGAGGAGGCAGCCTGTGCTTAGTAATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGGCTGCCTCCTCCTCGGCGCCTACTCAGAAACAGTTCAGGCTGTTTGCCAGGATACTGCAGTGGGTaGCAGCGCCAGGACCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: HRLPPPRRLLRNSSGCLPGYCSG*QRQDQK Trigger: TTTTTGGTCCTGGCGCTGCCACCCACTGCAGTATCC...TGGCAAACAGCCTGAACTGTTTCTGAGTAGGCGCCGAGGAGGAGGCAGCCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGGCTGCCTCCTCCTCGGCGCCTACTCAGAAACAGTTCAGGCTGTTTGCCAGCCTCATGTTCCTTCTaGTCCTCTGTCATGCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: HRLPPPRRLLRNSSGCLPASCSF*SSVMPS Trigger: GGAAGGCATGACAGAGGAGCAGAAGGAACATGAGGC...TGGCAAACAGCCTGAACTGTTTCTGAGTAGGCGCCGAGGAGGAGGCAGCCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR CAA 90 bp | GATATTAAAGAGCACTTTGAGGATCTCCATGGCCCTCTCCGTCTCTaGGGCTGGAAGCATCACCGGAGGGTTTTCTTTGGGGGCCACGCC | + |
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Preference number: 2 (lower is better) Translates to: DIKEHFEDLHGPLRL*GWKHHRRVFFGGHA Trigger: GGCGTGGCCCCCAAAGAAAACCCTCCGGTGATGCTTCCAGCCCAAGAGACGGAGAGGGCCATGGAGATCCTCAAAGTGCTCTTTAATATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR CAA 90 bp | ACTCTCTTCACATCTGTATCCAGGTGTGTCATGAGGCGGACAAGCTaGTTTCGAAGCAGGTCCCCCACCTCAGGCCGAGTCCTCACATCC | + |
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Preference number: 2 (lower is better) Translates to: TLFTSVSRCVMRRTS*FRSRSPTSGRVLTS Trigger: GGATGTGAGGACTCGGCCTGAGGTGGGGGACCTGCTTCGAAACAAGCTTGTCCGCCTCATGACACACCTGGATACAGATGTGAAGAGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR-3UTR TCA 90 bp | AACTTCCTGGCAGGACGGTGCATGCGGGCACATTCTGTCAACACGTTCAGCACAGCACATCCAAACACTTaGGGGGCAAGTTCCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: NFLAGRCMRAHSVNTFSTAHPNT*GASSPG Trigger: TCCTGGGGAACTTGCCCCTCAAGTGTTTGGATGTGC...TGTGCTGAACGTGTTGACAGAATGTGCCCGCATGCACCGTCCTGCCAGGAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGGCTGCCTCCTCCTCGGCGCCTACTCAGAAACAGTTCAGGCTGTTTGCCACATCCAGCCCAGTCATaGTTACACCATGTGTACCCT | + |
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Preference number: 2 (lower is better) Translates to: HRLPPPRRLLRNSSGCLPHPAQS*LHHVYP Trigger: AGGGTACACATGGTGTAAGCATGACTGGGCTGGATG...TGGCAAACAGCCTGAACTGTTTCTGAGTAGGCGCCGAGGAGGAGGCAGCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR-3UTR GCA 90 bp | GTCATTACTAAGCACAGGCTGCCTCCTCCTCGGCGCCTACTCAGAAACAGTTCATTCAGAATCCCCATCTaGCCAGCCCTCCCTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: VITKHRLPPPRRLLRNSSFRIPI*PALPEP Trigger: TGGCTCAGGGAGGGCTGGGCAGATGGGGATTCTGAA...TGAACTGTTTCTGAGTAGGCGCCGAGGAGGAGGCAGCCTGTGCTTAGTAATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| 3UTR-3UTR CCA 90 bp | AGCCGACCCAACGAGATTCCAGGAACTGGGGTCTTGTCTTCTATCCTTGTTCTTGAAGGGCTCCCCAGCTaGAGAGGGGTGTGGCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SRPNEIPGTGVLSSILVLEGLPS*RGVWLL Trigger: AAGAAGCCACACCCCTCTCCAGCTGGGGAGCCCTTC...AAGAACAAGGATAGAAGACAAGACCCCAGTTCCTGGAATCTCGTTGGGTCGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR-3UTR CCA 90 bp | GTATGTAGCCGACCCAACGAGATTCCAGGAACTGGGGTCTTGTCTTCTATCCTTTTCACCGTGTGGCCGTaGAACTCCTCTGTGCGGTCC | + |
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Preference number: 2 (lower is better) Translates to: VCSRPNEIPGTGVLSSILFTVWP*NSSVRS Trigger: GGACCGCACAGAGGAGTTCCACGGCCACACGGTGAA...AAGGATAGAAGACAAGACCCCAGTTCCTGGAATCTCGTTGGGTCGGCTACATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR-3UTR GCA 90 bp | ACACGTTCAGCACAGGTGCCACACATTCCTTCAGCCTGTGGGTCTGGTGCAGACACACCATGTGTACCCTaGTCCATTACCACCCTCATA | + |
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Preference number: 2 (lower is better) Translates to: TRSAQVPHIPSACGSGADTPCVP*SITTLI Trigger: TATGAGGGTGGTAATGGAGCAGGGTACACATGGTGT...GTCTGCACCAGACCCACAGGCTGAAGGAATGTGTGGCACCTGTGCTGAACGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCGACCCAACGAGATTCCAGGAACTGGGGTCTTGTCTTCTATCCTTGTTCTTTTCCTGGCAGGACGGTaGATGCGGGCACATTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: SRPNEIPGTGVLSSILVLFLAGR*MRAHSV Trigger: GACAGAATGTGCCCGCATGCACCGTCCTGCCAGGAA...AAGAACAAGGATAGAAGACAAGACCCCAGTTCCTGGAATCTCGTTGGGTCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR-3UTR GCA 90 bp | GTCATTACTAAGCACAGGCTGCCTCCTCCTCGGCGCCTACTCAGAAACAGTTCACATCCAGCCCAGTCATaGTTACACCATGTGTACCCT | + |
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Preference number: 2 (lower is better) Translates to: VITKHRLPPPRRLLRNSSHPAQS*LHHVYP Trigger: AGGGTACACATGGTGTAAGCATGACTGGGCTGGATG...TGAACTGTTTCTGAGTAGGCGCCGAGGAGGAGGCAGCCTGTGCTTAGTAATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR CAA 90 bp | TCAACTTCCCTCTTGACAGAGTCAAAGGTGATATTAAAGAGCACTTaGAGGATCTCCATGGCCCTCTCCGTCTCTTGGGCTGGAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: STSLLTESKVILKST*RISMALSVSWAGSI Trigger: GATGCTTCCAGCCCAAGAGACGGAGAGGGCCATGGAGATCCTCAAAGTGCTCTTTAATATCACCTTTGACTCTGTCAAGAGGGAAGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| 3UTR-3UTR TCA 90 bp | ACGATGCTAAAACCAATGGCAGGCATTACTCCGGGAAACCCCATTGAGCCTCCTTCAGAATCTCAGATTTaGCTTTGTCTTACTTTCGCC | + |
|
Preference number: 2 (lower is better) Translates to: TMLKPMAGITPGNPIEPPSESQI*LCLTFA Trigger: GGCGAAAGTAAGACAAAGTCAAATCTGAGATTCTGA...AGGAGGCTCAATGGGGTTTCCCGGAGTAATGCCTGCCATTGGTTTTAGCATCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR CAA 90 bp | TCTTGTCCCAAACTCTCCTGTATTCTGTGCCTCAGAATCTCAGATTaGACTTTGTCTTACTTTCGCCTTCACAGAATTACTAAGCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SCPKLSCILCLRISD*TLSYFRLHRITKPV Trigger: CACTGGCTTAGTAATTCTGTGAAGGCGAAAGTAAGACAAAGTCAAATCTGAGATTCTGAGGCACAGAATACAGGAGAGTTTGGGACAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR CAA 90 bp | TTTCTGTTTAATAGCCTTTCACCTGACTACTTCACATACACAGTCTaGTCCCAAACTCTCCTGTATTCTGTGCCTCAGAATCTCAGATTT | + |
|
Preference number: 2 (lower is better) Translates to: FLFNSLSPDYFTYTV*SQTLLYSVPQNLRF Trigger: AAATCTGAGATTCTGAGGCACAGAATACAGGAGAGTTTGGGACAAGACTGTGTATGTGAAGTAGTCAGGTGAAAGGCTATTAAACAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGGACATGTCTGGAAGCAGCACCAGTTCTGAAGGGGAGCAAGGCCGCTGGCGAGGGGTGTGGCTTCTaGAGGCAGCACCCCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PRTCLEAAPVLKGSKAAGEGCGF*RQHPRT Trigger: TGTCCTGGGGTGCTGCCTCAAGAAGCCACACCCCTC...GCCAGCGGCCTTGCTCCCCTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATTCACCGTGTGGCCGTGGAACTCCTCTGTGCGGTCCCCAGCAGCTTCAACGGCCCTCTCCGTCTCTaGGGCTGGAAGCATCACCGG | + |
|
Preference number: 3 (lower is better) Translates to: EIHRVAVELLCAVPSSFNGPLRL*GWKHHR Trigger: CCGGTGATGCTTCCAGCCCAAGAGACGGAGAGGGCC...GTTGAAGCTGCTGGGGACCGCACAGAGGAGTTCCACGGCCACACGGTGAATCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR GCA 72 bp | CCAGGAGATTCACCGTGTGGCCGTGGAACTCCTCTGTaGGGTCCCCAGCAGCTTCAACCATCACGCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PGDSPCGRGTPL*GPQQLQPSRSA Trigger: GGCACTGCGTGATGGTTGAAGCTGCTGGGGACCGCACAGAGGAGTTCCACGGCCACACGGTGAATCTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR TCA 72 bp | CCCTCCATGTGTGCGCCCTGTCCACCTCATCACTGCTaGAGGTGTAGTGCAGGTGCTGCTTTCTGCAGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: PSMCAPCPPHHC*RCSAGAAFCSG Trigger: GCCGCTGCAGAAAGCAGCACCTGCACTACACCTTCAGCAGTGATGAGGTGGACAGGGCGCACACATGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| 3UTR TCA 72 bp | TGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTaGCCAGGGATGTCTACCCTTGGGGCCCCTCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: WTVVLRGCLWKG*PGMSTLGAPPC Trigger: ACATGGAGGGGCCCCAAGGGTAGACATCCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGGATTAGGCGGCTTCTCCTCCACCCTTCCAGTCACAGGGTTGATGCTGGCCGAGGGGTGTGGCTTCTaGAGGCAGCACCCCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: IGLGGFSSTLPVTGLMLAEGCGF*RQHPRT Trigger: TGTCCTGGGGTGCTGCCTCAAGAAGCCACACCCCTC...GGCCAGCATCAACCCTGTGACTGGAAGGGTGGAGGAGAAGCCGCCTAATCCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR TCA 72 bp | AGCACCCCAGGACATGTCTGGAAGCAGCACCAGTTCTaGAGGGGAGCAAGGCCGCTGGCATCTTCAGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: STPGHVWKQHQF*RGARPLASSVR Trigger: CCTGACTGAAGATGCCAGCGGCCTTGCTCCCCTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR GCA 72 bp | CCCTGGAGAATACCCATGTCCTTCAGAATCCCCATCTaGCCAGCCCTCCCTGAGCCACTTCCCGCCACACTA | + |
|
Preference number: 3 (lower is better) Translates to: PWRIPMSFRIPI*PALPEPLPATL Trigger: TAGTGTGGCGGGAAGTGGCTCAGGGAGGGCTGGGCAGATGGGGATTCTGAAGGACATGGGTATTCTCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAGGAGATTCACCGTGTGGCCGTGGAACTCCTCTGTGCGGTCCCCAGCAGCATATTAAAGAGCACTTaGAGGATCTCCATGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PQEIHRVAVELLCAVPSSILKST*RISMAL Trigger: GAGGGCCATGGAGATCCTCAAAGTGCTCTTTAATAT...GCTGCTGGGGACCGCACAGAGGAGTTCCACGGCCACACGGTGAATCTCCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR GCA 72 bp | CACATACGGGCTCTGGGCTGGCATCCAGCCCAGTCATaGTTACACCATGTGTACCCTGCTCCATTACCACCC | + |
|
Preference number: 3 (lower is better) Translates to: HIRALGWHPAQS*LHHVYPAPLPP Trigger: GGGTGGTAATGGAGCAGGGTACACATGGTGTAAGCATGACTGGGCTGGATGCCAGCCCAGAGCCCGTATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR GCA 72 bp | AGGACCTGGGCCTTCAGGAACTTCCTGGCAGGACGGTaGATGCGGGCACATTCTGTCAACACGTTCAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: RTWAFRNFLAGR*MRAHSVNTFST Trigger: TGTGCTGAACGTGTTGACAGAATGTGCCCGCATGCACCGTCCTGCCAGGAAGTTCCTGAAGGCCCAGGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR CCA 72 bp | TTTGAGGATCTCCATGGCCCTCTCCGTCTCTTGGGCTaGAAGCATCACCGGAGGGTTTTCTTTGGGGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: FEDLHGPLRLLG*KHHRRVFFGGH Trigger: GTGGCCCCCAAAGAAAACCCTCCGGTGATGCTTCCAGCCCAAGAGACGGAGAGGGCCATGGAGATCCTCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTCTTGAGGCAGCACCCCAGGACATGTCTGGAAGCAGCACCAGTTCTGAAGCTCCGGGAAACCCCATaGAGCCTCCTGTTTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GFLRQHPRTCLEAAPVLKLRETP*SLLFSC Trigger: ACAGGAAAACAGGAGGCTCAATGGGGTTTCCCGGAG...CTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGGGTGCTGCCTCAAGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACTAAGCACAGGCTGCCTCCTCCTCGGCGCCTACTCAGAAACAGTTCAGGCTCTTCCAGTCACAGGGTaGATGCTGGCCTTGGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLSTGCLLLGAYSETVQALPVTG*MLALAS Trigger: GGAAGCCAAGGCCAGCATCAACCCTGTGACTGGAAG...AGCCTGAACTGTTTCTGAGTAGGCGCCGAGGAGGAGGCAGCCTGTGCTTAGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR CCA 72 bp | AGCACTTTGAGGATCTCCATGGCCCTCTCCGTCTCTTaGGCTGGAAGCATCACCGGAGGGTTTTCTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: STLRISMALSVS*AGSITGGFSLG Trigger: CCCCAAAGAAAACCCTCCGGTGATGCTTCCAGCCCAAGAGACGGAGAGGGCCATGGAGATCCTCAAAGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGGTGCAGACGTTTCTCTAGGAAGGCGAGGAGGGCACTGATCACATCCATGAGCACATCCAAACACTaGAGGGGCAAGTTCCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VWCRRFSRKARRALITSMSTSKH*RGKFPR Trigger: CCTGGGGAACTTGCCCCTCAAGTGTTTGGATGTGCT...CATGGATGTGATCAGTGCCCTCCTCGCCTTCCTAGAGAAACGTCTGCACCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR TCA 72 bp | CCTCCATTGTCTCACACATCGCATCTTGCAGAGAAGTaGGGTGACCCCTGGGACTCATCCCCATGGGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PPLSHTSHLAEK*GDPWDSSPWVG Trigger: TCCAACCCATGGGGATGAGTCCCAGGGGTCACCTCACTTCTCTGCAAGATGCGATGTGTGAGACAATGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR CCA 72 bp | TGTTTGAAACACAGCGTATGCCCCACATACGGGCTCTaGGCTGGCATCCAGCCCAGTCATGCTTACACCATG | + |
|
Preference number: 3 (lower is better) Translates to: CLKHSVCPTYGL*AGIQPSHAYTM Trigger: CATGGTGTAAGCATGACTGGGCTGGATGCCAGCCCAGAGCCCGTATGTGGGGCATACGCTGTGTTTCAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR CCA 72 bp | AAACATGAACCAGACCACAACATGTGGCCTGGACAGTaGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: KHEPDHNMWPGQ*SSEAAFGKADQ Trigger: CTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAGGACATGTCTGGAAGCAGCACCAGTTCTGAAGGGGAGCAAGGCCGCTGGTTCACATACACAGTCTaGTCCCAAACTCTCCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PQDMSGSSTSSEGEQGRWFTYTV*SQTLLY Trigger: ATACAGGAGAGTTTGGGACAAGACTGTGTATGTGAA...CCAGCGGCCTTGCTCCCCTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAGGACATGTCTGGAAGCAGCACCAGTTCTGAAGGGGAGCAAGGCCGCTGGTCATCAACTTCCCTCTaGACAGAGTCAAAGGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: PQDMSGSSTSSEGEQGRWSSTSL*TESKVI Trigger: TATCACCTTTGACTCTGTCAAGAGGGAAGTTGATGA...CCAGCGGCCTTGCTCCCCTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR TCA 72 bp | TCCTCCTGGATGACAGGACGGAGCCCATTTGTCCCTTaGCTTACTCTCGTGTTCACTCAGGCTCCTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSWMTGRSPFVP*LTLVFTQAPLL Trigger: CAGAAGAGGAGCCTGAGTGAACACGAGAGTAAGTCAAGGGACAAATGGGCTCCGTCCTGTCATCCAGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
||
| 3UTR GCA 72 bp | CAGGACCAAAAAGTTAAGAAGAGGCCACTAGCCCTGTaGTCAGTGGGGCCAGAAGCAGGAACCATGACGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QDQKVKKRPLAL*SVGPEAGTMTL Trigger: AAGCGTCATGGTTCCTGCTTCTGGCCCCACTGAGCACAGGGCTAGTGGCCTCTTCTTAACTTTTTGGTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR GCA 72 bp | ACTGAGTTAGTTGTCACAACTAGTGAGGCTTGGGTATaGGGATACTGCAGTGGGTGGCAGCGCCAGGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: TELVVTTSEAWV*GYCSGWQRQDQ Trigger: TTGGTCCTGGCGCTGCCACCCACTGCAGTATCCGCATACCCAAGCCTCACTAGTTGTGACAACTAACTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR GCA 72 bp | TTCCTGTCCTGTGTGCAGTCATTACTAAGCACAGGCTaGCTCCTCCTCGGCGCCTACTCAGAAACAGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLSCVQSLLSTG*LLLGAYSETVQ Trigger: CTGAACTGTTTCTGAGTAGGCGCCGAGGAGGAGGCAGCCTGTGCTTAGTAATGACTGCACACAGGACAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR CCA 72 bp | ACTAGTGAGGCTTGGGTATGCGGATACTGCAGTGGGTaGCAGCGCCAGGACCAAAAAGTTAAGAAGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TSEAWVCGYCSG*QRQDQKVKKRP Trigger: TGGCCTCTTCTTAACTTTTTGGTCCTGGCGCTGCCACCCACTGCAGTATCCGCATACCCAAGCCTCACTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR CCA 72 bp | CTCTCGTGTTCACTCAGGCTCCTCTTCTGCAGTCCCTaGAGAATACCCATGTCCTTCAGAATCCCCATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LSCSLRLLFCSP*RIPMSFRIPIC Trigger: GCAGATGGGGATTCTGAAGGACATGGGTATTCTCCAGGGACTGCAGAAGAGGAGCCTGAGTGAACACGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
||
| 3UTR-3UTR CAA 90 bp | GTATGTAGCCGACCCAACGAGATTCCAGGAACTGGGGTCTTGTCTTCTATCCTTATGAGGCGGACAAGCTaGTTTCGAAGCAGGTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VCSRPNEIPGTGVLSSILMRRTS*FRSRSP Trigger: GGGGGACCTGCTTCGAAACAAGCTTGTCCGCCTCAT...AAGGATAGAAGACAAGACCCCAGTTCCTGGAATCTCGTTGGGTCGGCTACATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR TCA 72 bp | CAGCTACTCTCTTCACATCTGTATCCAGGTGTGTCATaGGGCGGACAAGCTTGTTTCGAAGCAGGTCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QLLSSHLYPGVS*GGQACFEAGPP Trigger: TGGGGGACCTGCTTCGAAACAAGCTTGTCCGCCTCATGACACACCTGGATACAGATGTGAAGAGAGTAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR CCA 72 bp | CAACACGTTTACAAACATGAACCAGACCACAACATGTaGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QHVYKHEPDHNM*PGQWSSEAAFG Trigger: TCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGTAAACGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCATTACTAAGCACAGGCTGCCTCCTCCTCGGCGCCTACTCAGAAACAGTTCAAGAGCTGTCCCTCCATaGTCTCACACATCGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: VITKHRLPPPRRLLRNSSRAVPP*SHTSHL Trigger: AAGATGCGATGTGTGAGACAATGGAGGGACAGCTCT...TGAACTGTTTCTGAGTAGGCGCCGAGGAGGAGGCAGCCTGTGCTTAGTAATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR TCA 72 bp | TCATGCCTGAAGACAGCTCCAACACGTTTACAAACATaGACCAGACCACAACATGTGGCCTGGACAGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SCLKTAPTRLQT*TRPQHVAWTVV Trigger: GACCACTGTCCAGGCCACATGTTGTGGTCTGGTTCATGTTTGTAAACGTGTTGGAGCTGTCTTCAGGCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| 3UTR GCA 72 bp | GCATCCAGCCCAGTCATGCTTACACCATGTGTACCCTaGTCCATTACCACCCTCATACACGCATGTTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: ASSPVMLTPCVP*SITTLIHACSF Trigger: AAATGAACATGCGTGTATGAGGGTGGTAATGGAGCAGGGTACACATGGTGTAAGCATGACTGGGCTGGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR GCA 72 bp | CTTGACTTACTCTCGTGTTCACTCAGGCTCCTCTTCTaGAGTCCCTGGAGAATACCCATGTCCTTCAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: LDLLSCSLRLLF*SPWRIPMSFRI Trigger: GATTCTGAAGGACATGGGTATTCTCCAGGGACTGCAGAAGAGGAGCCTGAGTGAACACGAGAGTAAGTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
||
| 3UTR GCA 72 bp | AACATGTTCACTAGCTTCATGGCCTCATGTTCCTTCTaGTCCTCTGTCATGCCTTCCATAGGATTAGGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: NMFTSFMASCSF*SSVMPSIGLGG Trigger: GCCGCCTAATCCTATGGAAGGCATGACAGAGGAGCAGAAGGAACATGAGGCCATGAAGCTAGTGAACATGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR CCA 72 bp | TTTGGGATAGTGAGTGTTGACAAACTTCAGGTTATGTaGGTGTTCTCCTCCTGGATGACAGGACGGAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FGIVSVDKLQVM*VFSSWMTGRSP Trigger: TGGGCTCCGTCCTGTCATCCAGGAGGAGAACACCCACATAACCTGAAGTTTGTCAACACTCACTATCCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
||
| 3UTR CCA 72 bp | TCCATGTTAACTCCCATGAACTCTAAGGATCCTTCGTaGAGCTCCAGGGCCAGAAGCACATCCAAACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SMLTPMNSKDPS*SSRARSTSKHL Trigger: CAAGTGTTTGGATGTGCTTCTGGCCCTGGAGCTCCACGAAGGATCCTTAGAGTTCATGGGAGTTAACATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGCCTTCCATAGGATTAGGCGGCTTCTCCTCCACCCTTCCAGTCACAGGGTTCTCAGAATCTCAGATTaGACTTTGTCTTACTTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: HAFHRIRRLLLHPSSHRVLRISD*TLSYFR Trigger: GCGAAAGTAAGACAAAGTCAAATCTGAGATTCTGAG...AACCCTGTGACTGGAAGGGTGGAGGAGAAGCCGCCTAATCCTATGGAAGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTGAGTGTTGACAAACTTCAGGTTATGTGGGTGTTCTCCTCCTGGATGACACTCCGGGAAACCCCATaGAGCCTCCTGTTTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: IVSVDKLQVMWVFSSWMTLRETP*SLLFSC Trigger: ACAGGAAAACAGGAGGCTCAATGGGGTTTCCCGGAG...TGTCATCCAGGAGGAGAACACCCACATAACCTGAAGTTTGTCAACACTCACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| 3UTR TCA 72 bp | GCAGCCACATCCAAGAAACAACTTCACTTGTGGAAATaGAAGGTGGGTTCCCCGTCTTCACAGAGGGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: AATSKKQLHLWK*KVGSPSSQRVR Trigger: TCTTACCCTCTGTGAAGACGGGGAACCCACCTTTCATTTCCACAAGTGAAGTTGTTTCTTGGATGTGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR CCA 72 bp | TCTGTTCTAGCTGGATGGACAGGACAGATAAGACTATaGCTTCTTCACCTGGGGAAGTCACACAGCAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: SVLAGWTGQIRL*LLHLGKSHSRS Trigger: TGATCTGCTGTGTGACTTCCCCAGGTGAAGAAGCCATAGTCTTATCTGTCCTGTCCATCCAGCTAGAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGATGCTAAAACCAATGGCAGGCATTACTCCGGGAAACCCCATTGAGCCTCCTTCTTGTCTTCTATCCTaGTTCTTCGTTGACAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TMLKPMAGITPGNPIEPPSCLLS*FFVDSR Trigger: TCTGCTGTCAACGAAGAACAAGGATAGAAGACAAGA...AGGAGGCTCAATGGGGTTTCCCGGAGTAATGCCTGCCATTGGTTTTAGCATCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTATGTTTTGTGCTAGGCCTTCTGGGTTCCCTTTTCTTATTCATTTCAAACCTCCGAGGCTGCCTTaGGAAAGGCTGACCAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: QSMFCARPSGFPFLIHFKPPRLP*ERLTRD Trigger: ATCCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGG...TTTGAAATGAATAAGAAAAGGGAACCCAGAAGGCCTAGCACAAAACATAGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| 3UTR-3UTR CAA 90 bp | GTATGTAGCCGACCCAACGAGATTCCAGGAACTGGGGTCTTGTCTTCTATCCTTATCTCAGATTTGACTTaGTCTTACTTTCGCCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VCSRPNEIPGTGVLSSILISDLT*SYFRLH Trigger: GTGAAGGCGAAAGTAAGACAAAGTCAAATCTGAGAT...AAGGATAGAAGACAAGACCCCAGTTCCTGGAATCTCGTTGGGTCGGCTACATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| 3UTR TCA 72 bp | AAACTTGGCATCCTGTCTCTTTGGGATAGTGAGTGTTaGCAAACTTCAGGTTATGTGGGTGTTCTCCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KLGILSLWDSEC*QTSGYVGVLLL Trigger: CAGGAGGAGAACACCCACATAACCTGAAGTTTGTCAACACTCACTATCCCAAAGAGACAGGATGCCAAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
||
| 3UTR TCA 72 bp | GGAACTGGGGTCTTGTCTTCTATCCTTGTTCTTCGTTaGCAGCAGATGTGTGGTGATGTAGGAAATCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: GTGVLSSILVLR*QQMCGDVGNHE Trigger: TTCATGATTTCCTACATCACCACACATCTGCTGTCAACGAAGAACAAGGATAGAAGACAAGACCCCAGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| CDS-3UTR TCA 90 bp | CCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGCGTGTCCTCGTCCTCTaGGTACTGGCCCTCGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PDHNMWPGQWSSEAAFGKRVLVL*VLALGS Trigger: CGACCCGAGGGCCAGTACTCAGAGGACGAGGACACG...CTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGAGATTCACCGTGTGGCCGTGGAACTCCTCTGTGCGGTCCCCAGCAGCTTTGGTGACAAGCCCTaGTCCAGGACGGAGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQEIHRVAVELLCAVPSSFGDKP*SRTETS Trigger: ACTGGTCTCCGTCCTGGAGCAGGGCTTGTCACCAAA...GCTGCTGGGGACCGCACAGAGGAGTTCCACGGCCACACGGTGAATCTCCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTTAAGTTATCACGAGGGCAGCACAGCACGCCCGTCGCCAGGCAGGCGATGTTCCTGGCAGGACGGTaGATGCGGGCACATTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALKLSRGQHSTPVARQAMFLAGR*MRAHSV Trigger: GACAGAATGTGCCCGCATGCACCGTCCTGCCAGGAA...CATCGCCTGCCTGGCGACGGGCGTGCTGTGCTGCCCTCGTGATAACTTAAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| CDS-3UTR TCA 90 bp | GCCCTTAAGTTATCACGAGGGCAGCACAGCACGCCCGTCGCCAGGCAGGCGATGGCACATCCAAACACTTaGGGGGCAAGTTCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALKLSRGQHSTPVARQAMAHPNT*GASSPG Trigger: TCCTGGGGAACTTGCCCCTCAAGTGTTTGGATGTGC...CATCGCCTGCCTGGCGACGGGCGTGCTGTGCTGCCCTCGTGATAACTTAAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGGTGTGGCTTCTTGAGGCAGCACCCCAGGACATGTCTGGAAGCAGCATGCAGAGAAGTGAGGTaGCCCCTGGGACTCATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GEGCGFLRQHPRTCLEAACREVR*PLGLIP Trigger: GGGGATGAGTCCCAGGGGTCACCTCACTTCTCTGCA...TGCTGCTTCCAGACATGTCCTGGGGTGCTGCCTCAAGAAGCCACACCCCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| CDS-3UTR GCA 90 bp | CCCAGGACATGTCTGGAAGCAGCACCAGTTCTGAAGGGGAGCAAGGCCGCTGGCGGGGATAGCTCCTCTTaGGGTACAGTCCCACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRTCLEAAPVLKGSKAAGGDSSS*GTVPHA Trigger: AGCGTGTGGGACTGTACCGCAAGAGGAGCTATCCCC...GCCAGCGGCCTTGCTCCCCTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| CDS-3UTR GCA 90 bp | GCAGCGGCCCTTAAGTTATCACGAGGGCAGCACAGCACGCCCGTCGCCAGGCAGGCCTCATGTTCCTTCTaGTCCTCTGTCATGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAALKLSRGQHSTPVARQASCSF*SSVMPS Trigger: GGAAGGCATGACAGAGGAGCAGAAGGAACATGAGGC...CTGCCTGGCGACGGGCGTGCTGTGCTGCCCTCGTGATAACTTAAGGGCCGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTGAGGCAGCACCCCAGGACATGTCTGGAAGCAGCACCAGTTCTGAAGGGTCGTCCTCTGAGTACTaGCCCTCGGGTCGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLEAAPQDMSGSSTSSEGSSSEY*PSGRPP Trigger: TGGGGGCCGACCCGAGGGCCAGTACTCAGAGGACGA...CCCTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGGGTGCTGCCTCAAGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| 3UTR CAA 72 bp | ACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTaGGAAAGGCTGACCAGGGATGTCTACCCTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCGLDSGPPRLP*ERLTRDVYPWG Trigger: GCCCCAAGGGTAGACATCCCTGGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGACATGTCTGGAAGCAGCACCAGTTCTGAAGGGGAGCAAGGCCGCTGGCTTTGGTGACAAGCCCTaGTCCAGGACGGAGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRTCLEAAPVLKGSKAAGFGDKP*SRTETS Trigger: ACTGGTCTCCGTCCTGGAGCAGGGCTTGTCACCAAA...GCCAGCGGCCTTGCTCCCCTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| CDS-3UTR CCA 90 bp | CCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGTTCACCGTGTGGCCGTaGAACTCCTCTGTGCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PDHNMWPGQWSSEAAFGKFTVWP*NSSVRS Trigger: GGACCGCACAGAGGAGTTCCACGGCCACACGGTGAA...CTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| CDS-3UTR CCA 90 bp | CCAGACCACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGCCTTCAGGAACTTCCTaGCAGGACGGTGCATGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PDHNMWPGQWSSEAAFGKPSGTS*QDGACG Trigger: CCCGCATGCACCGTCCTGCCAGGAAGTTCCTGAAGG...CTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGTGGTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| CDS-3UTR TCA 90 bp | TTAGGCGGCTTCTCCTCCACCCTTCCAGTCACAGGGTTGATGCTGGCCTTGGCTACACCGTGCAGCTCCTaGAACAGTTGCTGGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LGGFSSTLPVTGLMLALATPCSS*NSCWRT Trigger: TGTGCGCCAGCAACTGTTTCAGGAGCTGCACGGTGT...AGCCAAGGCCAGCATCAACCCTGTGACTGGAAGGGTGGAGGAGAAGCCGCCTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| CDS-3UTR GCA 90 bp | ACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCTTACTAAGCACAGGCTaGCTCCTCCTCGGCGCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TTCGLDSGPPRLPLERLTLLSTG*LLLGAY Trigger: GTAGGCGCCGAGGAGGAGGCAGCCTGTGCTTAGTAA...GGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTGAGGCAGCACCCCAGGACATGTCTGGAAGCAGCACCAGTTCTGAAGGGTTCACCGTGTGGCCGTaGAACTCCTCTGTGCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLEAAPQDMSGSSTSSEGFTVWP*NSSVRS Trigger: GGACCGCACAGAGGAGTTCCACGGCCACACGGTGAA...CCCTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGGGTGCTGCCTCAAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| CDS-3UTR TCA 90 bp | AGGCAGCACCCCAGGACATGTCTGGAAGCAGCACCAGTTCTGAAGGGGAGCAAGGGGCATCATCGAAGGTaGAGCTCTGAGAATGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RQHPRTCLEAAPVLKGSKGHHRR*SSENAP Trigger: GGGAGCATTCTCAGAGCTTCACCTTCGATGATGCCC...CTTGCTCCCCTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGGGTGCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| CDS-3UTR GCA 90 bp | TTAGGCGGCTTCTCCTCCACCCTTCCAGTCACAGGGTTGATGCTGGCCTTGGCTCTCTTCCTGTCCTCCTaGTGGGCATCATCGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGGFSSTLPVTGLMLALALFLSS*WASSKV Trigger: CACCTTCGATGATGCCCAGCAGGAGGACAGGAAGAG...AGCCAAGGCCAGCATCAACCCTGTGACTGGAAGGGTGGAGGAGAAGCCGCCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCTGTGCTCAGTGGGGCCAGAAGCAGGAACCATGACGCTTGGTGTGTTTTCTTCCTGGCAGGACGGTaGATGCGGGCACATTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPVLSGARSRNHDAWCVFFLAGR*MRAHSV Trigger: GACAGAATGTGCCCGCATGCACCGTCCTGCCAGGAA...GAAAACACACCAAGCGTCATGGTTCCTGCTTCTGGCCCCACTGAGCACAGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCGTGGAACTCCTCTGTGCGGTCCCCAGCAGCTTCAACCATCACGCAGTTTCCTGTCCTCCTGCTaGGCATCATCGAAGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGRGTPLCGPQQLQPSRSFLSSC*ASSKVK Trigger: CTTCACCTTCGATGATGCCCAGCAGGAGGACAGGAA...ACTGCGTGATGGTTGAAGCTGCTGGGGACCGCACAGAGGAGTTCCACGGCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCCTGTGTGCAGTCATTACTAAGCACAGGCTGCCTCCTCCTCGGCGCCTACCTCATCCCCATGGGTTaGATGACTCTGTGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSCVQSLLSTGCLLLGAYLIPMG*MTLCLE Trigger: CTCCAGGCACAGAGTCATCCAACCCATGGGGATGAG...GTAGGCGCCGAGGAGGAGGCAGCCTGTGCTTAGTAATGACTGCACACAGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| CDS-3UTR TCA 90 bp | AGCCGACCCAACGAGATTCCAGGAACTGGGGTCTTGTCTTCTATCCTTGTTCTTCTGGCGGCTGGCAAATaGGTCCAGGCAGCTGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRPNEIPGTGVLSSILVLLAAGK*VQAAAV Trigger: GACCGCAGCTGCCTGGACTCATTTGCCAGCCGCCAG...AAGAACAAGGATAGAAGACAAGACCCCAGTTCCTGGAATCTCGTTGGGTCGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTTGAGGCAGCACCCCAGGACATGTCTGGAAGCAGCACCAGTTCTGAAGGGCTCTTCCTGTCCTCCTaGTGGGCATCATCGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLEAAPQDMSGSSTSSEGLFLSS*WASSKV Trigger: CACCTTCGATGATGCCCAGCAGGAGGACAGGAAGAG...CCCTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGGGTGCTGCCTCAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| CDS-3UTR GCA 90 bp | CCCGCCACACTACCCAGGTTTCTTCCAGTAACGATGCTAAAACCAATGGCAGGCGCTGGCGCACATCCGTaGGAAGGGCTGTTAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PATLPRFLPVTMLKPMAGAGAHP*EGLLAG Trigger: TCCTGCTAACAGCCCTTCGCACGGATGTGCGCCAGC...GCCTGCCATTGGTTTTAGCATCGTTACTGGAAGAAACCTGGGTAGTGTGGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| CDS-3UTR GCA 90 bp | ACAACATGTGGCCTGGACAGTGGTCCTCCGAGGCTGCCTTTGGAAAGGCTGACCAGCCTGTGGGTCTGGTaGAGACGTTTCTCTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TTCGLDSGPPRLPLERLTSLWVW*RRFSRK Trigger: CTTCCTAGAGAAACGTCTGCACCAGACCCACAGGCT...GGTCAGCCTTTCCAAAGGCAGCCTCGGAGGACCACTGTCCAGGCCACATGTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAGCACCCCAGGACATGTCTGGAAGCAGCACCAGTTCTGAAGGGGAGCAAGGCCTCATGTTCCTTCTaGTCCTCTGTCATGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQHPRTCLEAAPVLKGSKASCSF*SSVMPS Trigger: GGAAGGCATGACAGAGGAGCAGAAGGAACATGAGGC...CTTGCTCCCCTTCAGAACTGGTGCTGCTTCCAGACATGTCCTGGGGTGCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| 3UTR CAA 72 bp | GAGCACTTTGAGGATCTCCATGGCCCTCTCCGTCTCTaGGGCTGGAAGCATCACCGGAGGGTTTTCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EHFEDLHGPLRL*GWKHHRRVFFG Trigger: CCCAAAGAAAACCCTCCGGTGATGCTTCCAGCCCAAGAGACGGAGAGGGCCATGGAGATCCTCAAAGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR CAA 72 bp | ACATCTGTATCCAGGTGTGTCATGAGGCGGACAAGCTaGTTTCGAAGCAGGTCCCCCACCTCAGGCCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSVSRCVMRRTS*FRSRSPTSGRV Trigger: GACTCGGCCTGAGGTGGGGGACCTGCTTCGAAACAAGCTTGTCCGCCTCATGACACACCTGGATACAGATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| 3UTR CAA 72 bp | GGAGAGCTGTCCCTCCATTGTCTCACACATCGCATCTaGCAGAGAAGTGAGGTGACCCCTGGGACTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: GELSLHCLTHRI*QRSEVTPGTHP Trigger: GGGATGAGTCCCAGGGGTCACCTCACTTCTCTGCAAGATGCGATGTGTGAGACAATGGAGGGACAGCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| CDS-3UTR TCA 90 bp | CTGCAGCCACATCCAAGAAACAACTTCACTTGTGGAAATGAAAGGTGGGTTCCCCGTGTCCTCGTCCTCTaGGTACTGGCCCTCGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LQPHPRNNFTCGNERWVPRVLVL*VLALGS Trigger: CGACCCGAGGGCCAGTACTCAGAGGACGAGGACACG...GGGAACCCACCTTTCATTTCCACAAGTGAAGTTGTTTCTTGGATGTGGCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| CDS-3UTR CCA 90 bp | TACTCTCGTGTTCACTCAGGCTCCTCTTCTGCAGTCCCTGGAGAATACCCATGTCCTTCAGGAACTTCCTaGCAGGACGGTGCATGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YSRVHSGSSSAVPGEYPCPSGTS*QDGACG Trigger: CCCGCATGCACCGTCCTGCCAGGAAGTTCCTGAAGG...ACATGGGTATTCTCCAGGGACTGCAGAAGAGGAGCCTGAGTGAACACGAGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
||
| 3UTR CAA 72 bp | CTCCTCCTGGATGACAGGACGGAGCCCATTTGTCCCTaGACTTACTCTCGTGTTCACTCAGGCTCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLDDRTEPICP*TYSRVHSGSSS Trigger: AGAAGAGGAGCCTGAGTGAACACGAGAGTAAGTCAAGGGACAAATGGGCTCCGTCCTGTCATCCAGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTGATATTAAAGAGCACTTTGAGGATCTCCATGGCCCTCTCCGTCTCTTGGGACACGGTGCTTTGGTaGCAAGCCCTGCTCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVILKSTLRISMALSVSWDTVLW*QALLQD Trigger: GTCCTGGAGCAGGGCTTGTCACCAAAGCACCGTGTC...CCAAGAGACGGAGAGGGCCATGGAGATCCTCAAAGTGCTCTTTAATATCACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| CDS-3UTR GCA 90 bp | TCGTGTTCACTCAGGCTCCTCTTCTGCAGTCCCTGGAGAATACCCATGTCCTTCAGCCTGTGGGTCTGGTaGAGACGTTTCTCTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCSLRLLFCSPWRIPMSFSLWVW*RRFSRK Trigger: CTTCCTAGAGAAACGTCTGCACCAGACCCACAGGCT...GAAGGACATGGGTATTCTCCAGGGACTGCAGAAGAGGAGCCTGAGTGAACACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
||
| CDS-3UTR TCA 90 bp | GCATCCTGTCTCTTTGGGATAGTGAGTGTTGACAAACTTCAGGTTATGTGGGTGGACACGGTGCTTTGGTaGCAAGCCCTGCTCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASCLFGIVSVDKLQVMWVDTVLW*QALLQD Trigger: GTCCTGGAGCAGGGCTTGTCACCAAAGCACCGTGTC...CACCCACATAACCTGAAGTTTGTCAACACTCACTATCCCAAAGAGACAGGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| CDS-3UTR GCA 90 bp | GCATCCTGTCTCTTTGGGATAGTGAGTGTTGACAAACTTCAGGTTATGTGGGTGCGTGGAACTCCTCTGTaGGGTCCCCAGCAGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASCLFGIVSVDKLQVMWVRGTPL*GPQQLQ Trigger: TTGAAGCTGCTGGGGACCGCACAGAGGAGTTCCACG...CACCCACATAACCTGAAGTTTGTCAACACTCACTATCCCAAAGAGACAGGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGTTTCTTCCAGTAACGATGCTAAAACCAATGGCAGGCATTACTCCGGGACATTCCTTCAGCCTGTaGGTCTGGTGCAGACGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRFLPVTMLKPMAGITPGHSFSL*VWCRRF Trigger: GAAACGTCTGCACCAGACCCACAGGCTGAAGGAATG...TCCCGGAGTAATGCCTGCCATTGGTTTTAGCATCGTTACTGGAAGAAACCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| CDS-3UTR CCA 90 bp | CAGTCTATGTTTTGTGCTAGGCCTTCTGGGTTCCCTTTTCTTATTCATTTCAAATCGTCCTCTGAGTACTaGCCCTCGGGTCGGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSMFCARPSGFPFLIHFKSSSEY*PSGRPP Trigger: TGGGGGCCGACCCGAGGGCCAGTACTCAGAGGACGA...TTTGAAATGAATAAGAAAAGGGAACCCAGAAGGCCTAGCACAAAACATAGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| CDS-3UTR CCA 90 bp | GGTGTTCTCCTCCTGGATGACAGGACGGAGCCCATTTGTCCCTTGACTTACTCTTGTTCACTAGCTTCATaGCCTCATGTTCCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVLLLDDRTEPICPLTYSCSLAS*PHVPSA Trigger: AGCAGAAGGAACATGAGGCCATGAAGCTAGTGAACA...AGAGTAAGTCAAGGGACAAATGGGCTCCGTCCTGTCATCCAGGAGGAGAACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGTATTCTGTGCCTCAGAATCTCAGATTTGACTTTGTCTTACTTTCGCCTACACCGTGCAGCTCCTaGAACAGTTGCTGGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLYSVPQNLRFDFVLLSPTPCSS*NSCWRT Trigger: TGTGCGCCAGCAACTGTTTCAGGAGCTGCACGGTGT...AGGCGAAAGTAAGACAAAGTCAAATCTGAGATTCTGAGGCACAGAATACAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
||
| CDS-3UTR TCA 90 bp | ATAGTGAGTGTTGACAAACTTCAGGTTATGTGGGTGTTCTCCTCCTGGATGACAGCACATCCAAACACTTaGGGGGCAAGTTCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IVSVDKLQVMWVFSSWMTAHPNT*GASSPG Trigger: TCCTGGGGAACTTGCCCCTCAAGTGTTTGGATGTGC...TGTCATCCAGGAGGAGAACACCCACATAACCTGAAGTTTGTCAACACTCACTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
||
| 3UTR CAA 72 bp | CGCCAGGCAGGCGATGCACTAGGGCAATCTAGCATGTaGATCGGTAAAGTGGCATCTTTAACTACAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: RQAGDALGQSSM*IGKVASLTTTS Trigger: TGATGTTGTAGTTAAAGATGCCACTTTACCGATCAACATGCTAGATTGCCCTAGTGCATCGCCTGCCTGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
||
| 3UTR CAA 72 bp | CTCTTGACAGAGTCAAAGGTGATATTAAAGAGCACTTaGAGGATCTCCATGGCCCTCTCCGTCTCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLTESKVILKST*RISMALSVSWA Trigger: AGCCCAAGAGACGGAGAGGGCCATGGAGATCCTCAAAGTGCTCTTTAATATCACCTTTGACTCTGTCAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| CDS-3UTR TCA 90 bp | AAGACAAAGAGGAACTCGGCAGCTACTCTCTTCACATCTGTATCCAGGTGTGTCGATTACACAGGCATTTaGGAGACTCGAGGAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: KTKRNSAATLFTSVSRCVDYTGI*ETRGGH Trigger: ATGTCCTCCTCGAGTCTCTCAAATGCCTGTGTAATC...GACACACCTGGATACAGATGTGAAGAGAGTAGCTGCCGAGTTCCTCTTTGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTGAGTGTTGACAAACTTCAGGTTATGTGGGTGTTCTCCTCCTGGATGACATTCCTGTCCTCCTGCTaGGCATCATCGAAGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVSVDKLQVMWVFSSWMTFLSSC*ASSKVK Trigger: CTTCACCTTCGATGATGCCCAGCAGGAGGACAGGAA...TGTCATCCAGGAGGAGAACACCCACATAACCTGAAGTTTGTCAACACTCACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
||
| CDS-3UTR GCA 90 bp | CAGTCTATGTTTTGTGCTAGGCCTTCTGGGTTCCCTTTTCTTATTCATTTCAAACGTGGAACTCCTCTGTaGGGTCCCCAGCAGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSMFCARPSGFPFLIHFKRGTPL*GPQQLQ Trigger: TTGAAGCTGCTGGGGACCGCACAGAGGAGTTCCACG...TTTGAAATGAATAAGAAAAGGGAACCCAGAAGGCCTAGCACAAAACATAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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| CDS-3UTR TCA 90 bp | TTCCTCATCAACTTCCCTCTTGACAGAGTCAAAGGTGATATTAAAGAGCACTTTGGGCATCATCGAAGGTaGAGCTCTGAGAATGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: FLINFPLDRVKGDIKEHFGHHRR*SSENAP Trigger: GGGAGCATTCTCAGAGCTTCACCTTCGATGATGCCC...AAAGTGCTCTTTAATATCACCTTTGACTCTGTCAAGAGGGAAGTTGATGAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| CDS-3UTR CCA 90 bp | AGCTGGATGGACAGGACAGATAAGACTATGGCTTCTTCACCTGGGGAAGTCACACTTCTATCCTTGTTCTaGAGAGCTTGTCAAACATGT | + |
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Preference number: 4 (lower is better) Translates to: SWMDRTDKTMASSPGEVTLLSLF*RACQTC Trigger: ACATGTTTGACAAGCTCTCCAGAACAAGGATAGAAG...TGTGACTTCCCCAGGTGAAGAAGCCATAGTCTTATCTGTCCTGTCCATCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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| CDS-3UTR TCA 90 bp | CCCAAACTCTCCTGTATTCTGTGCCTCAGAATCTCAGATTTGACTTTGTCTTACGATTACACAGGCATTTaGGAGACTCGAGGAGGACAT | + |
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Preference number: 4 (lower is better) Translates to: PKLSCILCLRISDLTLSYDYTGI*ETRGGH Trigger: ATGTCCTCCTCGAGTCTCTCAAATGCCTGTGTAATC...GTAAGACAAAGTCAAATCTGAGATTCTGAGGCACAGAATACAGGAGAGTTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR CAA 72 bp | AATAGCCTTTCACCTGACTACTTCACATACACAGTCTaGTCCCAAACTCTCCTGTATTCTGTGCCTCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: NSLSPDYFTYTV*SQTLLYSVPQN Trigger: ATTCTGAGGCACAGAATACAGGAGAGTTTGGGACAAGACTGTGTATGTGAAGTAGTCAGGTGAAAGGCTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS-3UTR CCA 90 bp | CAGTCTATGTTTTGTGCTAGGCCTTCTGGGTTCCCTTTTCTTATTCATTTCAAATGTTCACTAGCTTCATaGCCTCATGTTCCTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QSMFCARPSGFPFLIHFKCSLAS*PHVPSA Trigger: AGCAGAAGGAACATGAGGCCATGAAGCTAGTGAACA...TTTGAAATGAATAAGAAAAGGGAACCCAGAAGGCCTAGCACAAAACATAGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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| 3UTR CAA 72 bp | TCCTGTATTCTGTGCCTCAGAATCTCAGATTTGACTTaGTCTTACTTTCGCCTTCACAGAATTACTAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SCILCLRISDLT*SYFRLHRITKP Trigger: TGGCTTAGTAATTCTGTGAAGGCGAAAGTAAGACAAAGTCAAATCTGAGATTCTGAGGCACAGAATACAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| 3UTR CAA 72 bp | AAACTCTCCTGTATTCTGTGCCTCAGAATCTCAGATTaGACTTTGTCTTACTTTCGCCTTCACAGAATTACT | + |
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Preference number: 4 (lower is better) Translates to: KLSCILCLRISD*TLSYFRLHRIT Trigger: AGTAATTCTGTGAAGGCGAAAGTAAGACAAAGTCAAATCTGAGATTCTGAGGCACAGAATACAGGAGAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS-3UTR CAA 90 bp | AGGCTGCCTTTGGAAAGGCTGACCAGGGATGTCTACCCTTGGGGCCCCTCCATGATGAGGCGGACAAGCTaGTTTCGAAGCAGGTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: RLPLERLTRDVYPWGPSMMRRTS*FRSRSP Trigger: GGGGGACCTGCTTCGAAACAAGCTTGTCCGCCTCAT...CATGGAGGGGCCCCAAGGGTAGACATCCCTGGTCAGCCTTTCCAAAGGCAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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| CDS TCA 90 bp | GTTAGTTCCAGCGCATCAGTCAGCAGGCGTACACCGTGCAGCTCCTaGAACAGTTGCTGGCGCACATCCGTGCGAAGGGCTGTTAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: VSSSASVSRRTPCSS*NSCWRTSVRRAVSR Trigger: CCTGCTAACAGCCCTTCGCACGGATGTGCGCCAGCAACTGTTTCAGGAGCTGCACGGTGTACGCCTGCTGACTGATGCGCTGGAACTAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS GCA 90 bp | CGGATAGTCTGCAGCCAGGTGACACGGTGCTTTGGTGACAAGCCCTaGTCCAGGACGGAGACCAGTAGCTTTGCGAGTCTCTTCCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: RIVCSQVTRCFGDKP*SRTETSSFASLFLS Trigger: GGACAGGAAGAGACTCGCAAAGCTACTGGTCTCCGTCCTGGAGCAGGGCTTGTCACCAAAGCACCGTGTCACCTGGCTGCAGACTATCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS GCA 90 bp | AATGAGTCCAGGCAGCTGCGGTCTCGGGATAGGATTCGGATAGTCTaGAGCCAGGTGACACGGTGCTTTGGTGACAAGCCCTGCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: NESRQLRSRDRIRIV*SQVTRCFGDKPCSR Trigger: CCTGGAGCAGGGCTTGTCACCAAAGCACCGTGTCACCTGGCTGCAGACTATCCGAATCCTATCCCGAGACCGCAGCTGCCTGGACTCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS-3UTR CAA 90 bp | ATAGGATTAGGCGGCTTCTCCTCCACCCTTCCAGTCACAGGGTTGATGCTGGCCCAGCTCCTGAAACAGTaGCTGGCGCACATCCGTGCG | + |
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Preference number: 5 (lower is better) Translates to: IGLGGFSSTLPVTGLMLAQLLKQ*LAHIRA Trigger: CGCACGGATGTGCGCCAGCAACTGTTTCAGGAGCTG...GGCCAGCATCAACCCTGTGACTGGAAGGGTGGAGGAGAAGCCGCCTAATCCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210708.2 |
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| CDS GCA 90 bp | CGGTCTCGGGATAGGATTCGGATAGTCTGCAGCCAGGTGACACGGTaGTTTGGTGACAAGCCCTGCTCCAGGACGGAGACCAGTAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: RSRDRIRIVCSQVTR*FGDKPCSRTETSSF Trigger: AAAGCTACTGGTCTCCGTCCTGGAGCAGGGCTTGTCACCAAAGCACCGTGTCACCTGGCTGCAGACTATCCGAATCCTATCCCGAGACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS TCA 90 bp | AGTCTCTTCCTGTCCTCCTGCTGGGCATCATCGAAGGTGAAGCTCTaGGAATGCTCCCGGTTGAACGACCGCAGAGCTTCTGTCACCGCA | + |
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Preference number: 5 (lower is better) Translates to: SLFLSSCWASSKVKL*ECSRLNDRRASVTA Trigger: TGCGGTGACAGAAGCTCTGCGGTCGTTCAACCGGGAGCATTCTCAGAGCTTCACCTTCGATGATGCCCAGCAGGAGGACAGGAAGAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS-3UTR CAA 90 bp | CCCGCCACACTACCCAGGTTTCTTCCAGTAACGATGCTAAAACCAATGGCAGGCCAGCTCCTGAAACAGTaGCTGGCGCACATCCGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PATLPRFLPVTMLKPMAGQLLKQ*LAHIRA Trigger: CGCACGGATGTGCGCCAGCAACTGTTTCAGGAGCTG...GCCTGCCATTGGTTTTAGCATCGTTACTGGAAGAAACCTGGGTAGTGTGGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS-3UTR CAA 90 bp | AGTGGGTGGCAGCGCCAGGACCAAAAAGTTAAGAAGAGGCCACTAGCCCTGTGCAGCACATCCAAACACTaGAGGGGCAAGTTCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGWQRQDQKVKKRPLALCSTSKH*RGKFPR Trigger: CCTGGGGAACTTGCCCCTCAAGTGTTTGGATGTGCT...GCACAGGGCTAGTGGCCTCTTCTTAACTTTTTGGTCCTGGCGCTGCCACCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS-3UTR CAA 90 bp | CTTCTGCAGTCCCTGGAGAATACCCATGTCCTTCAGAATCCCCATCTGCCCAGCGGGTTGATGCTGGCCTaGGCTTCCCTGTACTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLQSLENTHVLQNPHLPSGLMLA*ASLYSS Trigger: AGAGGAGTACAGGGAAGCCAAGGCCAGCATCAACCC...GCTGGGCAGATGGGGATTCTGAAGGACATGGGTATTCTCCAGGGACTGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
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| CDS-3UTR CAA 90 bp | GGAGAGGGGTGTGGCTTCTTGAGGCAGCACCCCAGGACATGTCTGGAAGCAGCACTGTGCCTGGAGAGCTaGTCAAACATGTTCACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GEGCGFLRQHPRTCLEAALCLES*SNMFTS Trigger: GCTAGTGAACATGTTTGACAAGCTCTCCAGGCACAG...TGCTGCTTCCAGACATGTCCTGGGGTGCTGCCTCAAGAAGCCACACCCCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS GCA 90 bp | GGCGTACACCGTGCAGCTCCTGAAACAGTTGCTGGCGCACATCCGTaGGAAGGGCTGTTAGCAGGAAAAGGAGCCTCAAGTCAAAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: GVHRAAPETVAGAHP*EGLLAGKGASSQRT Trigger: AGTTCTTTGACTTGAGGCTCCTTTTCCTGCTAACAGCCCTTCGCACGGATGTGCGCCAGCAACTGTTTCAGGAGCTGCACGGTGTACGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS-3UTR CAA 90 bp | GGCTCCTCTTCTGCAGTCCCTGGAGAATACCCATGTCCTTCAGAATCCCCATCTATGAGGCGGACAAGCTaGTTTCGAAGCAGGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSSSAVPGEYPCPSESPSMRRTS*FRSRSP Trigger: GGGGGACCTGCTTCGAAACAAGCTTGTCCGCCTCAT...AGATGGGGATTCTGAAGGACATGGGTATTCTCCAGGGACTGCAGAAGAGGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
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| CDS-3UTR CAA 90 bp | TCGTGTTCACTCAGGCTCCTCTTCTGCAGTCCCTGGAGAATACCCATGTCCTTCCTTCCAGTCACAGGGTaGATGCTGGCCTTGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SCSLRLLFCSPWRIPMSFLPVTG*MLALAS Trigger: GGAAGCCAAGGCCAGCATCAACCCTGTGACTGGAAG...GAAGGACATGGGTATTCTCCAGGGACTGCAGAAGAGGAGCCTGAGTGAACACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000209766.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGCAGCGCCAGGACCAAAAAGTTAAGAAGAGGCCACTAGCCCTGTGCTCACTCACACATCGCATCTaGCAGAGAAGTGAGGTGACC | + |
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Preference number: 5 (lower is better) Translates to: GWQRQDQKVKKRPLALCSLTHRI*QRSEVT Trigger: GGTCACCTCACTTCTCTGCAAGATGCGATGTGTGAG...TGAGCACAGGGCTAGTGGCCTCTTCTTAACTTTTTGGTCCTGGCGCTGCCACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS-3UTR CAA 90 bp | AGCCGACCCAACGAGATTCCAGGAACTGGGGTCTTGTCTTCTATCCTTGTTCTTGGGTTGATGCTGGCCTaGGCTTCCCTGTACTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRPNEIPGTGVLSSILVLGLMLA*ASLYSS Trigger: AGAGGAGTACAGGGAAGCCAAGGCCAGCATCAACCC...AAGAACAAGGATAGAAGACAAGACCCCAGTTCCTGGAATCTCGTTGGGTCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS-3UTR CAA 90 bp | AGCCGACCCAACGAGATTCCAGGAACTGGGGTCTTGTCTTCTATCCTTGTTCTTCTTCCAGTCACAGGGTaGATGCTGGCCTTGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRPNEIPGTGVLSSILVLLPVTG*MLALAS Trigger: GGAAGCCAAGGCCAGCATCAACCCTGTGACTGGAAG...AAGAACAAGGATAGAAGACAAGACCCCAGTTCCTGGAATCTCGTTGGGTCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS-3UTR CAA 90 bp | ACTTACTCTCGTGTTCACTCAGGCTCCTCTTCTGCAGTCCCTGGAGAATACCCAACTCATCCCCATGGGTaGGATGACTCTGTGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TYSRVHSGSSSAVPGEYPTHPHG*DDSVPG Trigger: TCCAGGCACAGAGTCATCCAACCCATGGGGATGAGT...TGGGTATTCTCCAGGGACTGCAGAAGAGGAGCCTGAGTGAACACGAGAGTAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS-3UTR CAA 90 bp | CCCAAACTCTCCTGTATTCTGTGCCTCAGAATCTCAGATTTGACTTTGTCTTACGGCCCTCTCCGTCTCTaGGGCTGGAAGCATCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: PKLSCILCLRISDLTLSYGPLRL*GWKHHR Trigger: CCGGTGATGCTTCCAGCCCAAGAGACGGAGAGGGCC...GTAAGACAAAGTCAAATCTGAGATTCTGAGGCACAGAATACAGGAGAGTTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS-3UTR CAA 90 bp | GTTCACTCAGGCTCCTCTTCTGCAGTCCCTGGAGAATACCCATGTCCTTCAGAAAGAGCTGTCCCTCCATaGTCTCACACATCGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: VHSGSSSAVPGEYPCPSERAVPP*SHTSHL Trigger: AAGATGCGATGTGTGAGACAATGGAGGGACAGCTCT...TTCTGAAGGACATGGGTATTCTCCAGGGACTGCAGAAGAGGAGCCTGAGTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS-3UTR CAA 90 bp | GGTGTTCTCCTCCTGGATGACAGGACGGAGCCCATTTGTCCCTTGACTTACTCTATATTAAAGAGCACTTaGAGGATCTCCATGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GVLLLDDRTEPICPLTYSILKST*RISMAL Trigger: GAGGGCCATGGAGATCCTCAAAGTGCTCTTTAATAT...AGAGTAAGTCAAGGGACAAATGGGCTCCGTCCTGTCATCCAGGAGGAGAACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS-3UTR CAA 90 bp | GATCATCCTATGTCCAGCAAGACTTCATGCCTGAAGACAGCTCCAACACGTTTAAGCACATCCAAACACTaGAGGGGCAAGTTCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DHPMSSKTSCLKTAPTRLSTSKH*RGKFPR Trigger: CCTGGGGAACTTGCCCCTCAAGTGTTTGGATGTGCT...TAAACGTGTTGGAGCTGTCTTCAGGCATGAAGTCTTGCTGGACATAGGATGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTCCTCTTCTGCAGTCCCTGGAGAATACCCATGTCCTTCAGAATCCCCATTCTTGTCTTCTATCCTaGTTCTGGAGAGCTTGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QAPLLQSLENTHVLQNPHSCLLS*FWRACQ Trigger: TTGACAAGCTCTCCAGAACAAGGATAGAAGACAAGA...ATGGGGATTCTGAAGGACATGGGTATTCTCCAGGGACTGCAGAAGAGGAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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| CDS-3UTR CAA 90 bp | GTATGTAGCCGACCCAACGAGATTCCAGGAACTGGGGTCTTGTCTTCTATCCTTTCATCAACTTCCCTCTaGACAGAGTCAAAGGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: VCSRPNEIPGTGVLSSILSSTSL*TESKVI Trigger: TATCACCTTTGACTCTGTCAAGAGGGAAGTTGATGA...AAGGATAGAAGACAAGACCCCAGTTCCTGGAATCTCGTTGGGTCGGCTACATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS-3UTR CAA 90 bp | CAGTCTATGTTTTGTGCTAGGCCTTCTGGGTTCCCTTTTCTTATTCATTTCAAACCAGGAACTGGGGTCTaGTCTTCTATCCTTGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSMFCARPSGFPFLIHFKPGTGV*SSILVL Trigger: CAGAACAAGGATAGAAGACAAGACCCCAGTTCCTGG...TTTGAAATGAATAAGAAAAGGGAACCCAGAAGGCCTAGCACAAAACATAGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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| CDS TCA 72 bp | AGCGCATCAGTCAGCAGGCGTACACCGTGCAGCTCCTaGAACAGTTGCTGGCGCACATCCGTGCGAAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SASVSRRTPCSS*NSCWRTSVRRA Trigger: AGCCCTTCGCACGGATGTGCGCCAGCAACTGTTTCAGGAGCTGCACGGTGTACGCCTGCTGACTGATGCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS GCA 72 bp | TGCAGCCAGGTGACACGGTGCTTTGGTGACAAGCCCTaGTCCAGGACGGAGACCAGTAGCTTTGCGAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: CSQVTRCFGDKP*SRTETSSFASL Trigger: GAGACTCGCAAAGCTACTGGTCTCCGTCCTGGAGCAGGGCTTGTCACCAAAGCACCGTGTCACCTGGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS GCA 72 bp | GATAGGATTCGGATAGTCTGCAGCCAGGTGACACGGTaGTTTGGTGACAAGCCCTGCTCCAGGACGGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: DRIRIVCSQVTR*FGDKPCSRTET Trigger: GGTCTCCGTCCTGGAGCAGGGCTTGTCACCAAAGCACCGTGTCACCTGGCTGCAGACTATCCGAATCCTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS CCA 72 bp | CAGCATAGCAGGCTAGTGCATGTAAGCTCTGGCGGCTaGCAAATGAGTCCAGGCAGCTGCGGTCTCGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: QHSRLVHVSSGG*QMSPGSCGLGI Trigger: TATCCCGAGACCGCAGCTGCCTGGACTCATTTGCCAGCCGCCAGAGCTTACATGCACTAGCCTGCTATGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS CAA 72 bp | GTGACAAGCCCTGCTCCAGGACGGAGACCAGTAGCTTaGCGAGTCTCTTCCTGTCCTCCTGCTGGGCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: VTSPAPGRRPVA*RVSSCPPAGHH Trigger: ATGATGCCCAGCAGGAGGACAGGAAGAGACTCGCAAAGCTACTGGTCTCCGTCCTGGAGCAGGGCTTGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS TCA 72 bp | CTGTCCTCCTGCTGGGCATCATCGAAGGTGAAGCTCTaGGAATGCTCCCGGTTGAACGACCGCAGAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSCWASSKVKL*ECSRLNDRRAS Trigger: AGAAGCTCTGCGGTCGTTCAACCGGGAGCATTCTCAGAGCTTCACCTTCGATGATGCCCAGCAGGAGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS GCA 72 bp | AGTCAAAGAACTGGACTTCGTGGGGATAGCTCCTCTTaGGGTACAGTCCCACACGCTCCGCTAGCCTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SQRTGLRGDSSS*GTVPHAPLASP Trigger: TGGTGAGGCTAGCGGAGCGTGTGGGACTGTACCGCAAGAGGAGCTATCCCCACGAAGTCCAGTTCTTTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS GCA 72 bp | CGTGCAGCTCCTGAAACAGTTGCTGGCGCACATCCGTaGGAAGGGCTGTTAGCAGGAAAAGGAGCCTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RAAPETVAGAHP*EGLLAGKGASS Trigger: ACTTGAGGCTCCTTTTCCTGCTAACAGCCCTTCGCACGGATGTGCGCCAGCAACTGTTTCAGGAGCTGCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026558.7 |
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| CDS CAA 72 bp | GCTGTTGGACTGCTGAGCACAAGATTACACAGGCATTaGAGAGACTCGAGGAGGACATCCATGTCTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AVGLLSTRLHRH*RDSRRTSMSGD Trigger: GTCCCCAGACATGGATGTCCTCCTCGAGTCTCTCAAATGCCTGTGTAATCTTGTGCTCAGCAGTCCAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026558.7 ENSMUST00000210708.2 |
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| CDS CAA 90 bp | GCCGACCCAACGAGATTCCAGGAACTGGGGTCTTGTCTTCTATCCTaGTTCTGGAGAGCTTGTCAAACATGTTCACTAGCTTCATGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ADPTRFQELGSCLLS*FWRACQTCSLASWP Trigger: AGGCCATGAAGCTAGTGAACATGTTTGACAAGCTCTCCAGAACAAGGATAGAAGACAAGACCCCAGTTCCTGGAATCTCGTTGGGTCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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| CDS CAA 90 bp | ATTCCAGGAACTGGGGTCTTGTCTTCTATCCTTGTTCTGGAGAGCTaGTCAAACATGTTCACTAGCTTCATGGCCTCATGTTCCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IPGTGVLSSILVLES*SNMFTSFMASCSFC Trigger: GCAGAAGGAACATGAGGCCATGAAGCTAGTGAACATGTTTGACAAGCTCTCCAGAACAAGGATAGAAGACAAGACCCCAGTTCCTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209766.2 |
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