Pregenerated sensors for RIC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048330Ensembl transcript IDs: ENSMUST00000055993.13, ENSMUST00000120876.2, ENSMUST00000147580.8
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGACATGGCCCTTGTGGACAGAACTGGGCTGTAGTACTCAAGAGTaGGAAAGGCCCAGCCACATGACTGCAGGCCTTGCTTGGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: WTWPLWTELGCSTQE*ERPSHMTAGLAWRW Trigger: CCACCTCCAAGCAAGGCCTGCAGTCATGTGGCTGGGCCTTTCCCACTCTTGAGTACTACAGCCCAGTTCTGTCCACAAGGGCCATGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR GCA 90 bp | GGGCAAGTTTTCCTTGGTGGCTTCCTCTTGCTCACTGTAGCCATCTaGACTGAAACCAGCATTCTCTGCCAAGACAGCAGGATCCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: GQVFLGGFLLLTVAI*TETSILCQDSRILL Trigger: GAGGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGTTTCAGTGCAGATGGCTACAGTGAGCAAGAGGAAGCCACCAAGGAAAACTTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
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| 3UTR GCA 90 bp | CTCAAAACCCTGGGGGTTGCGCTTCCTCAACATACCACCCACGTGTaGATTATCAGTGCTGACTCCCAGCCCTTCATTTGTAAAGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LKTLGVALPQHTTHV*IISADSQPFICKVL Trigger: CAGGACTTTACAAATGAAGGGCTGGGAGTCAGCACTGATAATGCACACGTGGGTGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
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| 3UTR CCA 90 bp | AACTGGCTGACAGTTCTTAAGTATGCTTGGTGGACATGGCCCTTGTaGACAGAACTGGGCTGTAGTACTCAAGAGTGGGAAAGGCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: NWLTVLKYAWWTWPL*TELGCSTQEWERPS Trigger: GCTGGGCCTTTCCCACTCTTGAGTACTACAGCCCAGTTCTGTCCACAAGGGCCATGTCCACCAAGCATACTTAAGAACTGTCAGCCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR GCA 90 bp | AGAGGATGCAGAGGGCACAAGGCCATGGATGAAACTGAGGAAAGGTaGCATGGGAACAGAGTAATGGATACTTTCCCAAGCAGGCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: RGCRGHKAMDETEER*HGNRVMDTFPSRLL Trigger: AAGCAGCCTGCTTGGGAAAGTATCCATTACTCTGTTCCCATGGCACCTTTCCTCAGTTTCATCCATGGCCTTGTGCCCTCTGCATCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
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| 3UTR CCA 90 bp | AGGAGGAAGACCCATCCTTACTATGGACAGTATCATCCCTTTGGCTaGGGTCCCAGACTGATAAGAGGGGCAAAACAAGCCAAGTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: RRKTHPYYGQYHPFG*GPRLIRGAKQAKCC Trigger: ACAGCACTTGGCTTGTTTTGCCCCTCTTATCAGTCTGGGACCCCAGCCAAAGGGATGATACTGTCCATAGTAAGGATGGGTCTTCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR TCA 90 bp | AGTTTTCCTTGGTGGCTTCCTCTTGCTCACTGTAGCCATCTGCACTaGAACCAGCATTCTCTGCCAAGACAGCAGGATCCTCCTCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: SFPWWLPLAHCSHLH*NQHSLPRQQDPPLH Trigger: ATGAAGAGGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGTTTCAGTGCAGATGGCTACAGTGAGCAAGAGGAAGCCACCAAGGAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
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| 3UTR TCA 90 bp | TGCCAAGACAGCAGGATCCTCCTCTTCATGAACACAGCAGGAGCATaGTTCTGGTTTGGGATCACACGGGGCAACAGAATTATCTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: CQDSRILLFMNTAGA*FWFGITRGNRIIFL Trigger: CAGAAAGATAATTCTGTTGCCCCGTGTGATCCCAAACCAGAATCATGCTCCTGCTGTGTTCATGAAGAGGAGGATCCTGCTGTCTTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
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| 3UTR CCA 90 bp | CACTTAAGGAACTGGCTGACAGTTCTTAAGTATGCTTGGTGGACATaGCCCTTGTGGACAGAACTGGGCTGTAGTACTCAAGAGTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: HLRNWLTVLKYAWWT*PLWTELGCSTQEWE Trigger: TTCCCACTCTTGAGTACTACAGCCCAGTTCTGTCCACAAGGGCCATGTCCACCAAGCATACTTAAGAACTGTCAGCCAGTTCCTTAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR TCA 90 bp | AAGGTGATTCTGTCCCGTGTTCACACTACTGGCTACTTTACAAAGTaGCAGGTGTGCAAGCACCGGGAAGGATTAGCTGTATCCATGGTA | + |
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Preference number: 1 (lower is better) Translates to: KVILSRVHTTGYFTK*QVCKHREGLAVSMV Trigger: TACCATGGATACAGCTAATCCTTCCCGGTGCTTGCACACCTGTCACTTTGTAAAGTAGCCAGTAGTGTGAACACGGGACAGAATCACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
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| 3UTR GCA 90 bp | CAGCCCTGTAAGACCTGTGTTTTTACTACCCTCACACTTTATAGATaGCCAACCAGGCTTGGGATGCTTAAGGAGCCAATCCAGAATTCC | + |
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Preference number: 1 (lower is better) Translates to: QPCKTCVFTTLTLYR*PTRLGMLKEPIQNS Trigger: GGAATTCTGGATTGGCTCCTTAAGCATCCCAAGCCTGGTTGGGCATCTATAAAGTGTGAGGGTAGTAAAAACACAGGTCTTACAGGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR CCA 90 bp | AATAAAGACAAAGGAAGCAGGGATCGAGGGAATATACAAGCAAAATaGTCTCCAAATAGGCCCGTGAGTTCATGGCCTGCTGCTCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: NKDKGSRDRGNIQAK*SPNRPVSSWPAALE Trigger: CTCCAGAGCAGCAGGCCATGAACTCACGGGCCTATTTGGAGACCATTTTGCTTGTATATTCCCTCGATCCCTGCTTCCTTTGTCTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR CCA 90 bp | AAAAGGGTTAGAGGATACTTCAGGTCATCTGGTCACTTAAGGAACTaGCTGACAGTTCTTAAGTATGCTTGGTGGACATGGCCCTTGTGG | + |
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Preference number: 1 (lower is better) Translates to: KRVRGYFRSSGHLRN*LTVLKYAWWTWPLW Trigger: CCACAAGGGCCATGTCCACCAAGCATACTTAAGAACTGTCAGCCAGTTCCTTAAGTGACCAGATGACCTGAAGTATCCTCTAACCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR GCA 90 bp | TTAGTGTCTCTGATAGGGAAACTCATGAATAGGAAGGTGATTCTGTaGTGTGTTCACACTCTGATAGGGAAGCGCATGACTAGGAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: LVSLIGKLMNRKVIL*CVHTLIGKRMTRKV Trigger: CACCTTCCTAGTCATGCGCTTCCCTATCAGAGTGTGAACACAGCACAGAATCACCTTCCTATTCATGAGTTTCCCTATCAGAGACACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
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| 3UTR TCA 90 bp | ATCCATTCAATAAATCATTCACAGGTAAATCATCTGTTGCTCCTATaGGGAGGGGTCAGACATTTGCCTAGGTGGTACCACCTGCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: IHSINHSQVNHLLLL*GGVRHLPRWYHLQA Trigger: TGCTTGCAGGTGGTACCACCTAGGCAAATGTCTGACCCCTCCTCATAGGAGCAACAGATGATTTACCTGTGAATGATTTATTGAATGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
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| 3UTR CCA 90 bp | GATTGTTTCTTGCCTACGCTTGATACCATCCGAAAGGTCATATATTaGATAAGTCTCTTCTGGGTAACCTTCCCAGTCCTCCATGTATGG | + |
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Preference number: 1 (lower is better) Translates to: DCFLPTLDTIRKVIY*ISLFWVTFPVLHVW Trigger: CCATACATGGAGGACTGGGAAGGTTACCCAGAAGAGACTTATCCAATATATGACCTTTCGGATGGTATCAAGCGTAGGCAAGAAACAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
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| 3UTR TCA 90 bp | CTTTTAGGTCAGGGTAATCCACCAGGATTGTTTCTTGCCTACGCTTaGTACCATCCGAAAGGTCATATATTGGATAAGTCTCTTCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: LLGQGNPPGLFLAYA*YHPKGHILDKSLLG Trigger: ACCCAGAAGAGACTTATCCAATATATGACCTTTCGGATGGTATCAAGCGTAGGCAAGAAACAATCCTGGTGGATTACCCTGACCTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
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| 3UTR GCA 90 bp | GAACCAGTGATACGGGGCTATCTTAAATCAACTTCTCATGGTGGATaGCAGAACCATCCAGAAAACAATCTGCTCAAACAAGAGTATCTG | + |
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Preference number: 1 (lower is better) Translates to: EPVIRGYLKSTSHGG*QNHPENNLLKQEYL Trigger: CAGATACTCTTGTTTGAGCAGATTGTTTTCTGGATGGTTCTGGCATCCACCATGAGAAGTTGATTTAAGATAGCCCCGTATCACTGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR TCA 90 bp | TATCCAGCTTCACAGAATTCCTTAAATTTTGAGTCTCCCATTTCATaGCTCGGAATGTTGTTGGAGATGCACAGCCTTTCAGCTTTCAAT | + |
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Preference number: 1 (lower is better) Translates to: YPASQNSLNFESPIS*LGMLLEMHSLSAFN Trigger: ATTGAAAGCTGAAAGGCTGTGCATCTCCAACAACATTCCGAGTCATGAAATGGGAGACTCAAAATTTAAGGAATTCTGTGAAGCTGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR TCA 90 bp | CATGAAAACATACTTGTCTATGAAGGTGTTTACAAGAAAGTTAGTTaGGGAGGAAGACCCATCCTTACTATGGACAGTATCATCCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: HENILVYEGVYKKVS*GGRPILTMDSIIPL Trigger: CAAAGGGATGATACTGTCCATAGTAAGGATGGGTCTTCCTCCTCAACTAACTTTCTTGTAAACACCTTCATAGACAAGTATGTTTTCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR CCA 90 bp | GTAGAACACATGCAGAGGAAAATCTTTATTTATACCTATTACCTCTaGTTTGCTCTTGATTGCCAACTTAAGGGGCTTAGAATCACCATG | + |
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Preference number: 1 (lower is better) Translates to: VEHMQRKIFIYTYYL*FALDCQLKGLRITM Trigger: CATGGTGATTCTAAGCCCCTTAAGTTGGCAATCAAGAGCAAACCAGAGGTAATAGGTATAAATAAAGATTTTCCTCTGCATGTGTTCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR GCA 90 bp | CAGAACCATCCAGAAAACAATCTGCTCAAACAAGAGTATCTGCGTTaGTTTTTACACTTAGTTATGTCAAGACCATCTTCAGTACATGTT | + |
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Preference number: 1 (lower is better) Translates to: QNHPENNLLKQEYLR*FLHLVMSRPSSVHV Trigger: AACATGTACTGAAGATGGTCTTGACATAACTAAGTGTAAAAAGCAACGCAGATACTCTTGTTTGAGCAGATTGTTTTCTGGATGGTTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR GCA 90 bp | GGTTCTTCAAAGTTTCTGGTATATACAAACAAATATATTCCTATATaGAGACTAACATGTAGAGTGGCAAGAACCATGAAGGACTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: GSSKFLVYTNKYIPI*RLTCRVARTMKDWS Trigger: GGACCAGTCCTTCATGGTTCTTGCCACTCTACATGTTAGTCTGCATATAGGAATATATTTGTTTGTATATACCAGAAACTTTGAAGAACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGGTCAGACATTTGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAAGTGGGCGTTTCCAGGTaGGGCAGTGGAGCAGTTCCG | + |
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Preference number: 2 (lower is better) Translates to: GGVRHLPRWYHLQAQTTKVGVSR*GSGAVP Trigger: CGGAACTGCTCCACTGCCCCACCTGGAAACGCCCAC...TTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCAAATGTCTGACCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAGGAACTGGCTGACAGTTCTTAAGTATGCTTGGTGGACATGGCCCTTGTGGCCCGCTGGCTCCTGCTaGCCTGAAGGACTGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LRNWLTVLKYAWWTWPLWPAGSC*PEGLPS Trigger: TGAGGGCAGTCCTTCAGGGCAGCAGGAGCCAGCGGG...CCACAAGGGCCATGTCCACCAAGCATACTTAAGAACTGTCAGCCAGTTCCTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGTGTTAAGGGGTCTTCTGGCTGATCACCCACCTGACTTACCAAGCACACTCGGTTTCCTGGCTACTTaGGCTCCTCATGGAAGGACC | + |
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Preference number: 2 (lower is better) Translates to: AVLRGLLADHPPDLPSTLGFLAT*APHGRT Trigger: GGTCCTTCCATGAGGAGCTCAAGTAGCCAGGAAACC...GAGTGTGCTTGGTAAGTCAGGTGGGTGATCAGCCAGAAGACCCCTTAACACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR TCA 90 bp | CATCTCCACTCTTCAGCATACCTCCCAGGCCCAGGCCTTGAGATAAGGAGGCACCTGCCCTATGTGCACTaGCTACCTCATTTGCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: HLHSSAYLPGPGLEIRRHLPYVH*LPHLQL Trigger: AAGCTGCAAATGAGGTAGTCAGTGCACATAGGGCAG...GTGCCTCCTTATCTCAAGGCCTGGGCCTGGGAGGTATGCTGAAGAGTGGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGCCCTTGTGGACAGAACTGGGCTGTAGTACTCAAGAGTGGGAAAGGCCCATCAGATATCTTGCTGTaGTCTGGGCCCCTAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: HGPCGQNWAVVLKSGKGPSDILL*SGPLGS Trigger: TGAGCCTAGGGGCCCAGAGCACAGCAAGATATCTGA...TGGGCCTTTCCCACTCTTGAGTACTACAGCCCAGTTCTGTCCACAAGGGCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGCCCTTGTGGACAGAACTGGGCTGTAGTACTCAAGAGTGGGAAAGGCCCATGGACATGGCCCTTGTaGACAGAACTGGGCTGTAGT | + |
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Preference number: 2 (lower is better) Translates to: HGPCGQNWAVVLKSGKGPWTWPL*TELGCS Trigger: ACTACAGCCCAGTTCTGTCCACAAGGGCCATGTCCA...TGGGCCTTTCCCACTCTTGAGTACTACAGCCCAGTTCTGTCCACAAGGGCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR GCA 90 bp | CTTAAGCAGTCCTGTAGCTTCAACAGCCTCAAACTTCAGCTCTGTGGGACACAGCGTGAGTTCATGGCCTaGTGCTCTGGAGGAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LKQSCSFNSLKLQLCGTQREFMA*CSGGVR Trigger: CCTGACTCCTCCAGAGCAGCAGGCCATGAACTCACG...CTGTGTCCCACAGAGCTGAAGTTTGAGGCTGTTGAAGCTACAGGACTGCTTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR CAA 90 bp | AGGAACTGGCTGACAGTTCTTAAGTATGCTTGGTGGACATGGCCCTaGTGGACAGAACTGGGCTGTAGTACTCAAGAGTGGGAAAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: RNWLTVLKYAWWTWP*WTELGCSTQEWERP Trigger: GGGCCTTTCCCACTCTTGAGTACTACAGCCCAGTTCTGTCCACAAGGGCCATGTCCACCAAGCATACTTAAGAACTGTCAGCCAGTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR CAA 90 bp | TGGATACTTTCCCAAGCAGGCTGCTTTCACTCAAAACCCTGGGGGTaGCGCTTCCTCAACATACCACCCACGTGTGCATTATCAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: WILSQAGCFHSKPWG*RFLNIPPTCALSVL Trigger: CAGCACTGATAATGCACACGTGGGTGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTGAGTGAAAGCAGCCTGCTTGGGAAAGTATCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCCCAAGAGCTATGGTATTGAACACAGAGGATGCAGAGGGCACAAGGCCATGCATCTGTTGCTCCTATaGGGAGGGGTCAGACATTTG | + |
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Preference number: 2 (lower is better) Translates to: WPKSYGIEHRGCRGHKAMHLLLL*GGVRHL Trigger: CAAATGTCTGACCCCTCCTCATAGGAGCAACAGATG...CATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCCCAAGAGCTATGGTATTGAACACAGAGGATGCAGAGGGCACAAGGCCATGCATCTTAGAAGGCTGTaGGGAGAGACTGCAGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: WPKSYGIEHRGCRGHKAMHLRRL*GETAAQ Trigger: TTGAGCTGCAGTCTCTCCTCACAGCCTTCTAAGATG...CATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR TCA 90 bp | CATGGCCCTTGTGGACAGAACTGGGCTGTAGTACTCAAGAGTGGGAAAGGCCCAAGTCTGTGGTGGATTTaGGGCCAACATGATGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: HGPCGQNWAVVLKSGKGPSLWWI*GQHDES Trigger: GCTTTCATCATGTTGGCCTCAAATCCACCACAGACT...TGGGCCTTTCCCACTCTTGAGTACTACAGCCCAGTTCTGTCCACAAGGGCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAGGAACTGGCTGACAGTTCTTAAGTATGCTTGGTGGACATGGCCCTTGTGGGAGTTCATGGCCTGCTaGTCTGGAGGAGTCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LRNWLTVLKYAWWTWPLWEFMAC*SGGVRA Trigger: TGCCCTGACTCCTCCAGAGCAGCAGGCCATGAACTC...CCACAAGGGCCATGTCCACCAAGCATACTTAAGAACTGTCAGCCAGTTCCTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGACTGCCCTCAACTACATGCTCCTCCTGCATTGTTACCTTCCATACAATGCGTGAGTTCATGGCCTaGTGCTCTGGAGGAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: EGLPSTTCSSCIVTFHTMREFMA*CSGGVR Trigger: CCTGACTCCTCCAGAGCAGCAGGCCATGAACTCACG...CATTGTATGGAAGGTAACAATGCAGGAGGAGCATGTAGTTGAGGGCAGTCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGTTAAGGGGTCTTCTGGCTGATCACCCACCTGACTTACCAAGCACACTCCTTTCCCAAGCAGGCTaGTTTCACTCAAAACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: AVLRGLLADHPPDLPSTLLSQAG*FHSKPW Trigger: CCAGGGTTTTGAGTGAAAGCAGCCTGCTTGGGAAAG...GAGTGTGCTTGGTAAGTCAGGTGGGTGATCAGCCAGAAGACCCCTTAACACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGCCTGGTTCCTGTAGTGATTGCATTTGTGAAGACCATATACAGGGTGTTCAGGCCCGTGAGTTCATaGCCTGCTGCTCTGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: HGLVPVVIAFVKTIYRVFRPVSS*PAALEE Trigger: CTCCTCCAGAGCAGCAGGCCATGAACTCACGGGCCT...GAACACCCTGTATATGGTCTTCACAAATGCAATCACTACAGGAACCAGGCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGCCCTTGTGGACAGAACTGGGCTGTAGTACTCAAGAGTGGGAAAGGCCCAACTGCAGGCCTTGCTTaGAGGTGGGTCTATTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: HGPCGQNWAVVLKSGKGPTAGLA*RWVYLN Trigger: GTTTAAATAGACCCACCTCCAAGCAAGGCCTGCAGT...TGGGCCTTTCCCACTCTTGAGTACTACAGCCCAGTTCTGTCCACAAGGGCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGAGTCATCACAAAGTCACAAGAACTCCTCAGAGTGACTCTGGACCATTCCCCAGGCCCAGGCCTTaGGATAAGGAGGCACACAGT | + |
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Preference number: 2 (lower is better) Translates to: KRSHHKVTRTPQSDSGPFPRPRP*DKEAHS Trigger: ACTGTGTGCCTCCTTATCTCAAGGCCTGGGCCTGGG...GAATGGTCCAGAGTCACTCTGAGGAGTTCTTGTGACTTTGTGATGACTCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAGGAACTGGCTGACAGTTCTTAAGTATGCTTGGTGGACATGGCCCTTGTGGGAGTGGCAAGAACCATaGAGGACTGGTCCTTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: LRNWLTVLKYAWWTWPLWEWQEP*RTGPFG Trigger: GCCAAAAGGACCAGTCCTTCATGGTTCTTGCCACTC...CCACAAGGGCCATGTCCACCAAGCATACTTAAGAACTGTCAGCCAGTTCCTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR TCA 90 bp | CTTAAGCAGTCCTGTAGCTTCAACAGCCTCAAACTTCAGCTCTGTGGGACACAGCCAGCTCAAACGCTCTaGTCCTTCCTCTTCTATCTC | + |
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Preference number: 2 (lower is better) Translates to: LKQSCSFNSLKLQLCGTQPAQTL*SFLFYL Trigger: GAGATAGAAGAGGAAGGATCAGAGCGTTTGAGCTGG...CTGTGTCCCACAGAGCTGAAGTTTGAGGCTGTTGAAGCTACAGGACTGCTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCCCAAGAGCTATGGTATTGAACACAGAGGATGCAGAGGGCACAAGGCCATGGAAACTGAGGAAAGGTaGCATGGGAACAGAGTAATG | + |
|
Preference number: 2 (lower is better) Translates to: WPKSYGIEHRGCRGHKAMETEER*HGNRVM Trigger: CATTACTCTGTTCCCATGGCACCTTTCCTCAGTTTC...CATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAAGCAGGGATCGAGGGAATATACAAGCAAAATGGTCTCCAAATAGGCCCGTGATTGAACACAGAGGATaGAGAGGGCACAAGGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: GSRDRGNIQAKWSPNRPVIEHRG*RGHKAM Trigger: CATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAAT...CACGGGCCTATTTGGAGACCATTTTGCTTGTATATTCCCTCGATCCCTGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTGCAGGGAAATCTGTCTGAAGAATTCACAATCTCTAGCCTTCCTATGGTCCAGGCCCGTGAGTTCATaGCCTGCTGCTCTGGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: NCREICLKNSQSLAFLWSRPVSS*PAALEE Trigger: CTCCTCCAGAGCAGCAGGCCATGAACTCACGGGCCT...GGACCATAGGAAGGCTAGAGATTGTGAATTCTTCAGACAGATTTCCCTGCAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGGTCAGACATTTGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAATCAAGAGCTATGGTATTaGACACAGAGGATGCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: EGSDICLGGTTCKHKQPNQELWY*TQRMQR Trigger: CCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTG...ATTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCAAATGTCTGACCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCTCATTTGCAGCTTACAGCCCTGTAAGACCTGTGTTTTTACTACCCTCACACTTGGTAATCTTCCTGTaGGCGTTTCCAGGTGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: TSFAAYSPVRPVFLLPSHLVIFL*AFPGGA Trigger: TGCCCCACCTGGAAACGCCCACAGGAAGATTACCAA...GTGTGAGGGTAGTAAAAACACAGGTCTTACAGGGCTGTAAGCTGCAAATGAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGCTTTCACTCAAAACCCTGGGGGTTGCGCTTCCTCAACATACCACCCACGCGAAAGGTCATATATTaGATAAGTCTCTTCTGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: GCFHSKPWGLRFLNIPPTRKVIY*ISLFWV Trigger: TACCCAGAAGAGACTTATCCAATATATGACCTTTCG...CGTGGGTGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTGAGTGAAAGCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR CAA 90 bp | TTCATTTGTAAAGTCCTGGGGCAAGTTTTCCTTGGTGGCTTCCTCTaGCTCACTGTAGCCATCTGCACTGAAACCAGCATTCTCTGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: FICKVLGQVFLGGFL*LTVAICTETSILCQ Trigger: TTGGCAGAGAATGCTGGTTTCAGTGCAGATGGCTACAGTGAGCAAGAGGAAGCCACCAAGGAAAACTTGCCCCAGGACTTTACAAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGACTGCCCTCAACTACATGCTCCTCCTGCATTGTTACCTTCCATACAATGCTCACACTTTATAGATaGCCAACCAGGCTTGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: EGLPSTTCSSCIVTFHTMLTLYR*PTRLGM Trigger: CATCCCAAGCCTGGTTGGGCATCTATAAAGTGTGAG...CATTGTATGGAAGGTAACAATGCAGGAGGAGCATGTAGTTGAGGGCAGTCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTGTTAAGGGGTCTTCTGGCTGATCACCCACCTGACTTACCAAGCACACTCAATATACAAGCAAAATaGTCTCCAAATAGGCCCGTG | + |
|
Preference number: 2 (lower is better) Translates to: AVLRGLLADHPPDLPSTLNIQAK*SPNRPV Trigger: CACGGGCCTATTTGGAGACCATTTTGCTTGTATATT...GAGTGTGCTTGGTAAGTCAGGTGGGTGATCAGCCAGAAGACCCCTTAACACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR TCA 90 bp | TCATTCACAGGTAAATCATCTGTTGCTCCTATGAGGAGGGGTCAGACATTTGCCCAAGAGCTATGGTATTaGACACAGAGGATGCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SFTGKSSVAPMRRGQTFAQELWY*TQRMQR Trigger: CCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTG...GGCAAATGTCTGACCCCTCCTCATAGGAGCAACAGATGATTTACCTGTGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCATTTGCAGCTTACAGCCCTGTAAGACCTGTGTTTTTACTACCCTCACACCAAGAGCTATGGTATTaGACACAGAGGATGCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: TSFAAYSPVRPVFLLPSHQELWY*TQRMQR Trigger: CCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTG...GTGTGAGGGTAGTAAAAACACAGGTCTTACAGGGCTGTAAGCTGCAAATGAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCCACAGCCTGAATTGCAGGGAAATCTGTCTGAAGAATTCACAATCTCTAGGTTTCCTGGCTACTTaGGCTCCTCATGGAAGGACC | + |
|
Preference number: 2 (lower is better) Translates to: EFHSLNCREICLKNSQSLGFLAT*APHGRT Trigger: GGTCCTTCCATGAGGAGCTCAAGTAGCCAGGAAACC...TAGAGATTGTGAATTCTTCAGACAGATTTCCCTGCAATTCAGGCTGTGGAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGACTGCCCTCAACTACATGCTCCTCCTGCATTGTTACCTTCCATACAATGGAAACTGAGGAAAGGTaGCATGGGAACAGAGTAATG | + |
|
Preference number: 2 (lower is better) Translates to: EGLPSTTCSSCIVTFHTMETEER*HGNRVM Trigger: CATTACTCTGTTCCCATGGCACCTTTCCTCAGTTTC...CATTGTATGGAAGGTAACAATGCAGGAGGAGCATGTAGTTGAGGGCAGTCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGGGTCAGACATTTGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAATAGGAAGGTGATTCTGTaGTGTGTTCACACTCTGATA | + |
|
Preference number: 2 (lower is better) Translates to: EGSDICLGGTTCKHKQPNRKVIL*CVHTLI Trigger: TATCAGAGTGTGAACACAGCACAGAATCACCTTCCT...ATTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCAAATGTCTGACCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGACTGCCCTCAACTACATGCTCCTCCTGCATTGTTACCTTCCATACAATGTGTCCTTCCTCCTCTTaGCATGTTTTAGCTTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: EGLPSTTCSSCIVTFHTMCPSSS*HVLAFH Trigger: GTGGAAAGCTAAAACATGGCAAGAGGAGGAAGGACA...CATTGTATGGAAGGTAACAATGCAGGAGGAGCATGTAGTTGAGGGCAGTCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGAACTGTTTGACGGCTGTGTCCTTGGTTTTCATAGAGAAGAGAACATGTCTCAAAACCCTGGGGGTTaGGCTTCCTCAACATACCAC | + |
|
Preference number: 2 (lower is better) Translates to: LELFDGCVLGFHREENMSQNPGG*ASSTYH Trigger: GTGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTG...AGACATGTTCTCTTCTCTATGAAAACCAAGGACACAGCCGTCAAACAGTTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
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| 3UTR-3UTR CCA 90 bp | AAAAGGAGTCATCACAAAGTCACAAGAACTCCTCAGAGTGACTCTGGACCATTCACAGTATCATCCCTTTaGCTGGGGTCCCAGACTGAT | + |
|
Preference number: 2 (lower is better) Translates to: KRSHHKVTRTPQSDSGPFTVSSL*LGSQTD Trigger: ATCAGTCTGGGACCCCAGCCAAAGGGATGATACTGT...GAATGGTCCAGAGTCACTCTGAGGAGTTCTTGTGACTTTGTGATGACTCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAAGCAGTCCTGTAGCTTCAACAGCCTCAAACTTCAGCTCTGTGGGACACAGAGTAATCGTTTCTCTTaGTCAGAAGTCACAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LKQSCSFNSLKLQLCGTQSNRFS*SEVTAC Trigger: ACAGGCTGTGACTTCTGACCAAGAGAAACGATTACT...CTGTGTCCCACAGAGCTGAAGTTTGAGGCTGTTGAAGCTACAGGACTGCTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCTGAATTGCAGGGAAATCTGTCTGAAGAATTCACAATCTCTAGCCTTCCTACATCTGTTGCTCCTATaGGGAGGGGTCAGACATTTG | + |
|
Preference number: 2 (lower is better) Translates to: SLNCREICLKNSQSLAFLHLLLL*GGVRHL Trigger: CAAATGTCTGACCCCTCCTCATAGGAGCAACAGATG...TAGGAAGGCTAGAGATTGTGAATTCTTCAGACAGATTTCCCTGCAATTCAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGGCCTGGTTCCTGTAGTGATTGCATTTGTGAAGACCATATACAGGGTGTTCACCAGGATTGTTTCTTaGCTACGCTTGATACCATCC | + |
|
Preference number: 2 (lower is better) Translates to: HGLVPVVIAFVKTIYRVFTRIVS*LRLIPS Trigger: GGATGGTATCAAGCGTAGGCAAGAAACAATCCTGGT...GAACACCCTGTATATGGTCTTCACAAATGCAATCACTACAGGAACCAGGCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR CAA 90 bp | CCAAATCCCTCTAGCCACAGAAGACATTCAGAGTTGCCTCTAGATTaGGCAGTTCTGTTCAACAGAATAAAGACAAAGGAAGCAGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: PNPSSHRRHSELPLD*AVLFNRIKTKEAGI Trigger: GATCCCTGCTTCCTTTGTCTTTATTCTGTTGAACAGAACTGCCAAATCTAGAGGCAACTCTGAATGTCTTCTGTGGCTAGAGGGATTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGTGCTCCTACAGTTTAGGGTCCACACTATAATGAATAAAACAGCTACCACACATCTTAGAAGGCTGTaGGGAGAGACTGCAGCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: SVLLQFRVHTIMNKTATTHLRRL*GETAAQ Trigger: TTGAGCTGCAGTCTCTCCTCACAGCCTTCTAAGATG...TGTGGTAGCTGTTTTATTCATTATAGTGTGGACCCTAAACTGTAGGAGCACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTCATTTGCAGCTTACAGCCCTGTAAGACCTGTGTTTTTACTACCCTCACACAGGAAGGTGATTCTGTaGTGTGTTCACACTCTGATA | + |
|
Preference number: 2 (lower is better) Translates to: TSFAAYSPVRPVFLLPSHRKVIL*CVHTLI Trigger: TATCAGAGTGTGAACACAGCACAGAATCACCTTCCT...GTGTGAGGGTAGTAAAAACACAGGTCTTACAGGGCTGTAAGCTGCAAATGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGGGCAAAACAAGCCAAGTGCTGTGTATCATCATTCACCTCAGCTCCCTGTATCCAGAAAACAATCTaGTCAAACAAGAGTATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: RGAKQAKCCVSSFTSAPCIQKTI*SNKSIC Trigger: GCAGATACTCTTGTTTGAGCAGATTGTTTTCTGGAT...ACAGGGAGCTGAGGTGAATGATGATACACAGCACTTGGCTTGTTTTGCCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTCATTTGCAGCTTACAGCCCTGTAAGACCTGTGTTTTTACTACCCTCACACTTCAGTCTTCTTAGTTaGGGCATTGGACTATGCACA | + |
|
Preference number: 2 (lower is better) Translates to: TSFAAYSPVRPVFLLPSHFSLLS*GIGLCT Trigger: TGTGCATAGTCCAATGCCCCAACTAAGAAGACTGAA...GTGTGAGGGTAGTAAAAACACAGGTCTTACAGGGCTGTAAGCTGCAAATGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR-3UTR CCA 90 bp | AATTGCAGGGAAATCTGTCTGAAGAATTCACAATCTCTAGCCTTCCTATGGTCCTGGATAAGTCTCTTCTaGGTAACCTTCCCAGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: NCREICLKNSQSLAFLWSWISLF*VTFPVL Trigger: GAGGACTGGGAAGGTTACCCAGAAGAGACTTATCCA...GGACCATAGGAAGGCTAGAGATTGTGAATTCTTCAGACAGATTTCCCTGCAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
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| 3UTR-3UTR GCA 90 bp | GAATTCCACAGCCTGAATTGCAGGGAAATCTGTCTGAAGAATTCACAATCTCTACTCACTGTAGCCATCTaGACTGAAACCAGCATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: EFHSLNCREICLKNSQSLLTVAI*TETSIL Trigger: GAGAATGCTGGTTTCAGTGCAGATGGCTACAGTGAG...TAGAGATTGTGAATTCTTCAGACAGATTTCCCTGCAATTCAGGCTGTGGAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAGTTGCCTCTAGATTTGGCAGTTCTGTTCAACAGAATAAAGACAAAGGAAACAGAATTATCTTTCTaGGCTCCAGGGTCAGTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SELPLDLAVLFNRIKTKETELSF*APGSVG Trigger: GCCCACTGACCCTGGAGCCCAGAAAGATAATTCTGT...TTCCTTTGTCTTTATTCTGTTGAACAGAACTGCCAAATCTAGAGGCAACTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCCACAGCCTGAATTGCAGGGAAATCTGTCTGAAGAATTCACAATCTCTAGTGATTTCTCGGAGCTaGTGCAGTAATCGTTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: EFHSLNCREICLKNSQSLVISRS*CSNRFS Trigger: AGAGAAACGATTACTGCATCAGCTCCGAGAAATCAC...TAGAGATTGTGAATTCTTCAGACAGATTTCCCTGCAATTCAGGCTGTGGAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | GAATTCCACAGCCTGAATTGCAGGGAAATCTGTCTGAAGAATTCACAATCTCTAACTTCTCATGGTGGATaGCAGAACCATCCAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: EFHSLNCREICLKNSQSLTSHGG*QNHPEN Trigger: GTTTTCTGGATGGTTCTGGCATCCACCATGAGAAGT...TAGAGATTGTGAATTCTTCAGACAGATTTCCCTGCAATTCAGGCTGTGGAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGAACTGTTTGACGGCTGTGTCCTTGGTTTTCATAGAGAAGAGAACATGTCTATTCTTGTTCTTCTGTaGTCCTACAGTTTAGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LELFDGCVLGFHREENMSILVLL*SYSLGS Trigger: GGACCCTAAACTGTAGGAGCACAGAAGAACAAGAAT...AGACATGTTCTCTTCTCTATGAAAACCAAGGACACAGCCGTCAAACAGTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGAACTGTTTGACGGCTGTGTCCTTGGTTTTCATAGAGAAGAGAACATGTCTTCTCTAGCCTTCCTATaGTCCATAGTGCATCTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LELFDGCVLGFHREENMSSLAFL*SIVHLL Trigger: TAACAGATGCACTATGGACCATAGGAAGGCTAGAGA...AGACATGTTCTCTTCTCTATGAAAACCAAGGACACAGCCGTCAAACAGTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CAA 90 bp | AGATTAATGCCTCCAAATCCCTCTAGCCACAGAAGACATTCAGAGTaGCCTCTAGATTTGGCAGTTCTGTTCAACAGAATAAAGACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RLMPPNPSSHRRHSE*PLDLAVLFNRIKTK Trigger: CTTTGTCTTTATTCTGTTGAACAGAACTGCCAAATCTAGAGGCAACTCTGAATGTCTTCTGTGGCTAGAGGGATTTGGAGGCATTAATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CAA 90 bp | TCAACTGCATTCTGCACAATTTCAATCAAACATTCTACACAGGGATaGGTACAGTGCAGCGTTTGTGTTTCTCTAGTCCCGTTAACATGT | + |
|
Preference number: 2 (lower is better) Translates to: STAFCTISIKHSTQG*VQCSVCVSLVPLTC Trigger: ACATGTTAACGGGACTAGAGAAACACAAACGCTGCACTGTACCAATCCCTGTGTAGAATGTTTGATTGAAATTGTGCAGAATGCAGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTTCATTCTTAAAACTTAAGTCCTCAATATCAGCTAACCCAGTTCTCTTTCACATTGAACACAGAGGATaGAGAGGGCACAAGGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: SSFLKLKSSISANPVLFHIEHRG*RGHKAM Trigger: CATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAAT...GTGAAAGAGAACTGGGTTAGCTGATATTGAGGACTTAAGTTTTAAGAATGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTGCTCCTACAGTTTAGGGTCCACACTATAATGAATAAAACAGCTACCACAAGGAAGGTGATTCTGTaGTGTGTTCACACTCTGATA | + |
|
Preference number: 2 (lower is better) Translates to: SVLLQFRVHTIMNKTATTRKVIL*CVHTLI Trigger: TATCAGAGTGTGAACACAGCACAGAATCACCTTCCT...TGTGGTAGCTGTTTTATTCATTATAGTGTGGACCCTAAACTGTAGGAGCACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CAA 90 bp | GGTCACTGGAGACCTAATGGTAAGGCCTTGATGAAACCCTTAATATaGAGAAATGAAGATCATACAATGAAACCAAGCCCCTTGATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: GHWRPNGKALMKPLI*RNEDHTMKPSPLIL Trigger: CAAAATCAAGGGGCTTGGTTTCATTGTATGATCTTCATTTCTCAATATTAAGGGTTTCATCAAGGCCTTACCATTAGGTCTCCAGTGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCTTTCCAGAGTGTCTGAGTGAAGACCATTATTGCTTAAGTCTAAATACAAAGTGCAGTTTTCCCCTTTaGAAGCTGAGGATGAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FFPECLSEDHYCLSLNTKCSFPL*KLRMKE Trigger: CTCCTTCATCCTCAGCTTTCAAAGGGGAAAACTGCA...CTTTGTATTTAGACTTAAGCAATAATGGTCTTCACTCAGACACTCTGGAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | GCGTTGCTTTTTACACTTAGTTATGTCAAGACCATCTTCAGTACATGTTCAACTTTCCACAGCCTGAATTaGAGGGAAATCTGTCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ALLFTLSYVKTIFSTCSTFHSLN*REICLK Trigger: CTTCAGACAGATTTCCCTGCAATTCAGGCTGTGGAA...AGTTGAACATGTACTGAAGATGGTCTTGACATAACTAAGTGTAAAAAGCAACGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CCA 90 bp | GAATTCCACAGCCTGAATTGCAGGGAAATCTGTCTGAAGAATTCACAATCTCTAAATATACAAGCAAAATaGTCTCCAAATAGGCCCGTG | + |
|
Preference number: 2 (lower is better) Translates to: EFHSLNCREICLKNSQSLNIQAK*SPNRPV Trigger: CACGGGCCTATTTGGAGACCATTTTGCTTGTATATT...TAGAGATTGTGAATTCTTCAGACAGATTTCCCTGCAATTCAGGCTGTGGAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CAA 90 bp | CCAGAACCATCCAGAAAACAATCTGCTCAAACAAGAGTATCTGCGTaGCTTTTTACACTTAGTTATGTCAAGACCATCTTCAGTACATGT | + |
|
Preference number: 2 (lower is better) Translates to: PEPSRKQSAQTRVSA*LFTLSYVKTIFSTC Trigger: ACATGTACTGAAGATGGTCTTGACATAACTAAGTGTAAAAAGCAACGCAGATACTCTTGTTTGAGCAGATTGTTTTCTGGATGGTTCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CAA 90 bp | CTTGATTGCCAACTTAAGGGGCTTAGAATCACCATGAAAACATACTaGTCTATGAAGGTGTTTACAAGAAAGTTAGTTGAGGAGGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LDCQLKGLRITMKTY*SMKVFTRKLVEEED Trigger: GTCTTCCTCCTCAACTAACTTTCTTGTAAACACCTTCATAGACAAGTATGTTTTCATGGTGATTCTAAGCCCCTTAAGTTGGCAATCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTTCATTCTTAAAACTTAAGTCCTCAATATCAGCTAACCCAGTTCTCTTTCACGAAACTGAGGAAAGGTaGCATGGGAACAGAGTAATG | + |
|
Preference number: 2 (lower is better) Translates to: SSFLKLKSSISANPVLFHETEER*HGNRVM Trigger: CATTACTCTGTTCCCATGGCACCTTTCCTCAGTTTC...GTGAAAGAGAACTGGGTTAGCTGATATTGAGGACTTAAGTTTTAAGAATGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTTCCAGAGTGTCTGAGTGAAGACCATTATTGCTTAAGTCTAAATACAAAGACTTCTCATGGTGGATaGCAGAACCATCCAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: FFPECLSEDHYCLSLNTKTSHGG*QNHPEN Trigger: GTTTTCTGGATGGTTCTGGCATCCACCATGAGAAGT...CTTTGTATTTAGACTTAAGCAATAATGGTCTTCACTCAGACACTCTGGAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTGCTCCTACAGTTTAGGGTCCACACTATAATGAATAAAACAGCTACCACACAGTACATGTTCAACTaGATTCTGCACAATTTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: SVLLQFRVHTIMNKTATTQYMFN*ILHNFN Trigger: ATTGAAATTGTGCAGAATGCAGTTGAACATGTACTG...TGTGGTAGCTGTTTTATTCATTATAGTGTGGACCCTAAACTGTAGGAGCACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATGTCAAGACCATCTTCAGTACATGTTCAACTGCATTCTGCACAATTTCAATTCATTTGTAAAGTCCTaGGGCAAGTTTTCCTTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LCQDHLQYMFNCILHNFNSFVKS*GKFSLV Trigger: CACCAAGGAAAACTTGCCCCAGGACTTTACAAATGA...ATTGAAATTGTGCAGAATGCAGTTGAACATGTACTGAAGATGGTCTTGACATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR CAA 90 bp | ATAAGGAAAGTGGTACCCTTTGAAGTGAAGGAATGGCCTGGTTTTTaGATACTACAAAGTGTTTTAGACATGCTAATGGTTAAGGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: IRKVVPFEVKEWPGF*ILQSVLDMLMVKEI Trigger: AATCTCCTTAACCATTAGCATGTCTAAAACACTTTGTAGTATCAAAAAACCAGGCCATTCCTTCACTTCAAAGGGTACCACTTTCCTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTTCCAGAGTGTCTGAGTGAAGACCATTATTGCTTAAGTCTAAATACAAAGATCCAGAAAACAATCTaGTCAAACAAGAGTATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: FFPECLSEDHYCLSLNTKIQKTI*SNKSIC Trigger: GCAGATACTCTTGTTTGAGCAGATTGTTTTCTGGAT...CTTTGTATTTAGACTTAAGCAATAATGGTCTTCACTCAGACACTCTGGAAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR GCA 72 bp | CCTCAGCTCCCTGTGAGCCTGCCCGCTGGCTCCTGCTaGCCTGAAGGACTGCCCTCAACTACATGCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PQLPVSLPAGSC*PEGLPSTTCSS Trigger: GGAGGAGCATGTAGTTGAGGGCAGTCCTTCAGGGCAGCAGGAGCCAGCGGGCAGGCTCACAGGGAGCTGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | CCCTTGTGGACAGAACTGGGCTGTAGTACTCAAGAGTaGGAAAGGCCCAGCCACATGACTGCAGGCCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PLWTELGCSTQE*ERPSHMTAGLA Trigger: AGCAAGGCCTGCAGTCATGTGGCTGGGCCTTTCCCACTCTTGAGTACTACAGCCCAGTTCTGTCCACAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | AGTATGCTTGGTGGACATGGCCCTTGTGGACAGAACTaGGCTGTAGTACTCAAGAGTGGGAAAGGCCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SMLGGHGPCGQN*AVVLKSGKGPA Trigger: GGCTGGGCCTTTCCCACTCTTGAGTACTACAGCCCAGTTCTGTCCACAAGGGCCATGTCCACCAAGCATACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTGTTAAGGGGTCTTCTGGCTGATCACCCACCTGACTTACCAAGCACACTCGGGTTTCCTGGCTACTaGAGCTCCTCATGGAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: AVLRGLLADHPPDLPSTLGFPGY*SSSWKD Trigger: GTCCTTCCATGAGGAGCTCAAGTAGCCAGGAAACCC...GAGTGTGCTTGGTAAGTCAGGTGGGTGATCAGCCAGAAGACCCCTTAACACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR GCA 72 bp | CTGGGGGTTGCGCTTCCTCAACATACCACCCACGTGTaGATTATCAGTGCTGACTCCCAGCCCTTCATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LGVALPQHTTHV*IISADSQPFIC Trigger: ACAAATGAAGGGCTGGGAGTCAGCACTGATAATGCACACGTGGGTGGTATGTTGAGGAAGCGCAACCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR GCA 72 bp | CCCAAGCAGGCTGCTTTCACTCAAAACCCTGGGGGTTaGGCTTCCTCAACATACCACCCACGTGTGCATTAT | + |
|
Preference number: 3 (lower is better) Translates to: PKQAAFTQNPGG*ASSTYHPRVHY Trigger: ATAATGCACACGTGGGTGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTGAGTGAAAGCAGCCTGCTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGCTTTCACTCAAAACCCTGGGGGTTGCGCTTCCTCAACATACCACCCACGGATGTGTCGATGAACTaGCCTTCTTTCATGACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GCFHSKPWGLRFLNIPPTDVSMN*PSFMTL Trigger: CAGGGTCATGAAAGAAGGCAAGTTCATCGACACATC...CGTGGGTGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTGAGTGAAAGCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR TCA 72 bp | GCTGTATCCATGGTAGTGGCCCAAGAGCTATGGTATTaGACACAGAGGATGCAGAGGGCACAAGGCCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: AVSMVVAQELWY*TQRMQRAQGHG Trigger: TCCATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCACTACCATGGATACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
||
| 3UTR TCA 72 bp | GGAATATACAAGCAAAATGGTCTCCAAATAGGCCCGTaGGTTCATGGCCTGCTGCTCTGGAGGAGTCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GIYKQNGLQIGP*VHGLLLWRSQG Trigger: GCCCTGACTCCTCCAGAGCAGCAGGCCATGAACTCACGGGCCTATTTGGAGACCATTTTGCTTGTATATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR GCA 72 bp | GGCTCCTGCTGCCCTGAAGGACTGCCCTCAACTACATaGTCCTCCTGCATTGTTACCTTCCATACAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GSCCPEGLPSTT*SSCIVTFHTMR Trigger: TCTCATTGTATGGAAGGTAACAATGCAGGAGGAGCATGTAGTTGAGGGCAGTCCTTCAGGGCAGCAGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | CAAGCAAAATGGTCTCCAAATAGGCCCGTGAGTTCATaGCCTGCTGCTCTGGAGGAGTCAGGGCATCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: QAKWSPNRPVSS*PAALEESGHLR Trigger: TCTAAGATGCCCTGACTCCTCCAGAGCAGCAGGCCATGAACTCACGGGCCTATTTGGAGACCATTTTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | CTCAAAGTTGGTAATCTTCCTGTGGGCGTTTCCAGGTaGGGCAGTGGAGCAGTTCCGATCCTCTGCAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LKVGNLPVGVSR*GSGAVPILCSF Trigger: AAAACTGCAGAGGATCGGAACTGCTCCACTGCCCCACCTGGAAACGCCCACAGGAAGATTACCAACTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGACTGCCCTCAACTACATGCTCCTCCTGCATTGTTACCTTCCATACAATGGGAGGGGTCAGACATTaGCCTAGGTGGTACCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: EGLPSTTCSSCIVTFHTMGGVRH*PRWYHL Trigger: CAGGTGGTACCACCTAGGCAAATGTCTGACCCCTCC...CATTGTATGGAAGGTAACAATGCAGGAGGAGCATGTAGTTGAGGGCAGTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGCTTTCACTCAAAACCCTGGGGGTTGCGCTTCCTCAACATACCACCCACGCCGAAAGGTCATATATaGGATAAGTCTCTTCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GCFHSKPWGLRFLNIPPTPKGHI*DKSLLG Trigger: ACCCAGAAGAGACTTATCCAATATATGACCTTTCGG...CGTGGGTGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTGAGTGAAAGCAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR GCA 72 bp | GGTCCCAGACTGATAAGAGGGGCAAAACAAGCCAAGTaGTGTGTATCATCATTCACCTCAGCTCCCTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GPRLIRGAKQAK*CVSSFTSAPCE Trigger: CTCACAGGGAGCTGAGGTGAATGATGATACACAGCACTTGGCTTGTTTTGCCCCTCTTATCAGTCTGGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | GTATTGAACACAGAGGATGCAGAGGGCACAAGGCCATaGATGAAACTGAGGAAAGGTGCCATGGGAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VLNTEDAEGTRP*MKLRKGAMGTE Trigger: CTCTGTTCCCATGGCACCTTTCCTCAGTTTCATCCATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | AGAGACTGCAGCTCAATCAGATATCTTGCTGTGCTCTaGGCCCCTAGGCTCAGAATTGAGCATGCTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RDCSSIRYLAVL*APRLRIEHALL Trigger: GAGAAGAGCATGCTCAATTCTGAGCCTAGGGGCCCAGAGCACAGCAAGATATCTGATTGAGCTGCAGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | ACCCATCCTTACTATGGACAGTATCATCCCTTTGGCTaGGGTCCCAGACTGATAAGAGGGGCAAAACAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: THPYYGQYHPFG*GPRLIRGAKQA Trigger: GGCTTGTTTTGCCCCTCTTATCAGTCTGGGACCCCAGCCAAAGGGATGATACTGTCCATAGTAAGGATGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCATTTGCAGCTTACAGCCCTGTAAGACCTGTGTTTTTACTACCCTCACACCCCCTAGGCTCAGAATaGAGCATGCTCTTCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TSFAAYSPVRPVFLLPSHPLGSE*SMLFSG Trigger: CCCTGAGAAGAGCATGCTCAATTCTGAGCCTAGGGG...GTGTGAGGGTAGTAAAAACACAGGTCTTACAGGGCTGTAAGCTGCAAATGAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCCAAGAGCTATGGTATTGAACACAGAGGATGCAGAGGGCACAAGGCCATGGAGTTGCCTCTAGATTaGGCAGTTCTGTTCAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: WPKSYGIEHRGCRGHKAMELPLD*AVLFNR Trigger: TCTGTTGAACAGAACTGCCAAATCTAGAGGCAACTC...CATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR TCA 72 bp | CTGTCCCGTGTTCACACTACTGGCTACTTTACAAAGTaGCAGGTGTGCAAGCACCGGGAAGGATTAGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LSRVHTTGYFTK*QVCKHREGLAV Trigger: TACAGCTAATCCTTCCCGGTGCTTGCACACCTGTCACTTTGTAAAGTAGCCAGTAGTGTGAACACGGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
||
| 3UTR TCA 72 bp | AGCAGGATCCTCCTCTTCATGAACACAGCAGGAGCATaGTTCTGGTTTGGGATCACACGGGGCAACAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: SRILLFMNTAGA*FWFGITRGNRI Trigger: AATTCTGTTGCCCCGTGTGATCCCAAACCAGAATCATGCTCCTGCTGTGTTCATGAAGAGGAGGATCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR GCA 72 bp | AGAGGGCACAAGGCCATGGATGAAACTGAGGAAAGGTaGCATGGGAACAGAGTAATGGATACTTTCCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RGHKAMDETEER*HGNRVMDTFPS Trigger: GCTTGGGAAAGTATCCATTACTCTGTTCCCATGGCACCTTTCCTCAGTTTCATCCATGGCCTTGTGCCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
||
| 3UTR GCA 72 bp | ATCATCTGTTGCTCCTATGAGGAGGGGTCAGACATTTaGCTAGGTGGTACCACCTGCAAGCACAAACAACCA | + |
|
Preference number: 3 (lower is better) Translates to: IICCSYEEGSDI*LGGTTCKHKQP Trigger: TGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCAAATGTCTGACCCCTCCTCATAGGAGCAACAGATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
||
| 3UTR GCA 72 bp | CTCACTGTAGCCATCTGCACTGAAACCAGCATTCTCTaGCAAGACAGCAGGATCCTCCTCTTCATGAACACA | + |
|
Preference number: 3 (lower is better) Translates to: LTVAICTETSIL*QDSRILLFMNT Trigger: TGTGTTCATGAAGAGGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGTTTCAGTGCAGATGGCTACAGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | GTCCTCCATGTATGGGGCTTCCTCAGCTTCCTTCTCTaGAGATGTGTCGATGAACTTGCCTTCTTTCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: VLHVWGFLSFLL*RCVDELAFFHD Trigger: GTCATGAAAGAAGGCAAGTTCATCGACACATCTCCAGAGAAGGAAGCTGAGGAAGCCCCATACATGGAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGCAGGGATCGAGGGAATATACAAGCAAAATGGTCTCCAAATAGGCCCGTGGTTTCTTGCCTACGCTaGATACCATCCGAAAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GSRDRGNIQAKWSPNRPVVSCLR*IPSERS Trigger: TGACCTTTCGGATGGTATCAAGCGTAGGCAAGAAAC...CACGGGCCTATTTGGAGACCATTTTGCTTGTATATTCCCTCGATCCCTGCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | AAAGGAAGCAGGGATCGAGGGAATATACAAGCAAAATaGTCTCCAAATAGGCCCGTGAGTTCATGGCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KGSRDRGNIQAK*SPNRPVSSWPA Trigger: AGCAGGCCATGAACTCACGGGCCTATTTGGAGACCATTTTGCTTGTATATTCCCTCGATCCCTGCTTCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | AGAAAGTTAGTTGAGGAGGAAGACCCATCCTTACTATaGACAGTATCATCCCTTTGGCTGGGGTCCCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: RKLVEEEDPSLL*TVSSLWLGSQT Trigger: AGTCTGGGACCCCAGCCAAAGGGATGATACTGTCCATAGTAAGGATGGGTCTTCCTCCTCAACTAACTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | TGTGCTAATAAGCACCTACCATTGCACACTTCACACTaGGCAGCTTTCAGAAACAGTCCTGTAAGGTGGACG | + |
|
Preference number: 3 (lower is better) Translates to: CANKHLPLHTSH*AAFRNSPVRWT Trigger: CGTCCACCTTACAGGACTGTTTCTGAAAGCTGCCCAGTGTGAAGTGTGCAATGGTAGGTGCTTATTAGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | ACAGTTCTTAAGTATGCTTGGTGGACATGGCCCTTGTaGACAGAACTGGGCTGTAGTACTCAAGAGTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TVLKYAWWTWPL*TELGCSTQEWE Trigger: TTCCCACTCTTGAGTACTACAGCCCAGTTCTGTCCACAAGGGCCATGTCCACCAAGCATACTTAAGAACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | AACTGGCTGACAGTTCTTAAGTATGCTTGGTGGACATaGCCCTTGTGGACAGAACTGGGCTGTAGTACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NWLTVLKYAWWT*PLWTELGCSTQ Trigger: TTGAGTACTACAGCCCAGTTCTGTCCACAAGGGCCATGTCCACCAAGCATACTTAAGAACTGTCAGCCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | CCTCTTCATGAACACAGCAGGAGCATGATTCTGGTTTaGGATCACACGGGGCAACAGAATTATCTTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PLHEHSRSMILV*DHTGQQNYLSG Trigger: CCCAGAAAGATAATTCTGTTGCCCCGTGTGATCCCAAACCAGAATCATGCTCCTGCTGTGTTCATGAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGGCAAAACAAGCCAAGTGCTGTGTATCATCATTCACCTCAGCTCCCTGTATTCCACAGCCTGAATaGCAGGGAAATCTGTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RGAKQAKCCVSSFTSAPCIPQPE*QGNLSE Trigger: TTCAGACAGATTTCCCTGCAATTCAGGCTGTGGAAT...ACAGGGAGCTGAGGTGAATGATGATACACAGCACTTGGCTTGTTTTGCCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCTCAAACAAGAGTATCTGCGTTGCTTTTTACACTTAGTTATGTCAAGACCCCCCTAGGCTCAGAATaGAGCATGCTCTTCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SAQTRVSALLFTLSYVKTPLGSE*SMLFSG Trigger: CCCTGAGAAGAGCATGCTCAATTCTGAGCCTAGGGG...GGTCTTGACATAACTAAGTGTAAAAAGCAACGCAGATACTCTTGTTTGAGCAGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGATCCCAGCTCAAACGCTCTGATCCTTCCTCTTCTATCTCTCCCATTTGTTCACCAGGATTGTTTCTaGCCTACGCTTGATACCATC | + |
|
Preference number: 3 (lower is better) Translates to: NDPSSNALILPLLSLPFVHQDCF*PTLDTI Trigger: GATGGTATCAAGCGTAGGCAAGAAACAATCCTGGTG...AACAAATGGGAGAGATAGAAGAGGAAGGATCAGAGCGTTTGAGCTGGGATCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR TCA 72 bp | TTGCCTTCTTTCATGACCCTGGTGATTTCTCGGAGCTaGTGCAGTAATCGTTTCTCTTGGTCAGAAGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LPSFMTLVISRS*CSNRFSWSEVT Trigger: TGTGACTTCTGACCAAGAGAAACGATTACTGCATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR GCA 72 bp | TGCCCTGAAGGACTGCCCTCAACTACATGCTCCTCCTaGATTGTTACCTTCCATACAATGAGAACGTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: CPEGLPSTTCSS*IVTFHTMRTFN Trigger: ATTAAACGTTCTCATTGTATGGAAGGTAACAATGCAGGAGGAGCATGTAGTTGAGGGCAGTCCTTCAGGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | AGAGGATACTTCAGGTCATCTGGTCACTTAAGGAACTaGCTGACAGTTCTTAAGTATGCTTGGTGGACATGG | + |
|
Preference number: 3 (lower is better) Translates to: RGYFRSSGHLRN*LTVLKYAWWTW Trigger: CCATGTCCACCAAGCATACTTAAGAACTGTCAGCCAGTTCCTTAAGTGACCAGATGACCTGAAGTATCCTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR CCA 72 bp | TTGCCTACGCTTGATACCATCCGAAAGGTCATATATTaGATAAGTCTCTTCTGGGTAACCTTCCCAGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LPTLDTIRKVIY*ISLFWVTFPVL Trigger: GAGGACTGGGAAGGTTACCCAGAAGAGACTTATCCAATATATGACCTTTCGGATGGTATCAAGCGTAGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR TCA 72 bp | ATAAATCATTCACAGGTAAATCATCTGTTGCTCCTATaGGGAGGGGTCAGACATTTGCCTAGGTGGTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: INHSQVNHLLLL*GGVRHLPRWYH Trigger: GTGGTACCACCTAGGCAAATGTCTGACCCCTCCTCATAGGAGCAACAGATGATTTACCTGTGAATGATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 ENSMUST00000147580.8 |
||
| 3UTR TCA 72 bp | CAGGGTAATCCACCAGGATTGTTTCTTGCCTACGCTTaGTACCATCCGAAAGGTCATATATTGGATAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QGNPPGLFLAYA*YHPKGHILDKS Trigger: AGACTTATCCAATATATGACCTTTCGGATGGTATCAAGCGTAGGCAAGAAACAATCCTGGTGGATTACCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR GCA 72 bp | ATACGGGGCTATCTTAAATCAACTTCTCATGGTGGATaGCAGAACCATCCAGAAAACAATCTGCTCAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: IRGYLKSTSHGG*QNHPENNLLKQ Trigger: TTGTTTGAGCAGATTGTTTTCTGGATGGTTCTGGCATCCACCATGAGAAGTTGATTTAAGATAGCCCCGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCTCAAACAAGAGTATCTGCGTTGCTTTTTACACTTAGTTATGTCAAGACCGAGTTGCCTCTAGATTaGGCAGTTCTGTTCAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SAQTRVSALLFTLSYVKTELPLD*AVLFNR Trigger: TCTGTTGAACAGAACTGCCAAATCTAGAGGCAACTC...GGTCTTGACATAACTAAGTGTAAAAAGCAACGCAGATACTCTTGTTTGAGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR TCA 72 bp | ATACTTGTCTATGAAGGTGTTTACAAGAAAGTTAGTTaGGGAGGAAGACCCATCCTTACTATGGACAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: ILVYEGVYKKVS*GGRPILTMDSI Trigger: GATACTGTCCATAGTAAGGATGGGTCTTCCTCCTCAACTAACTTTCTTGTAAACACCTTCATAGACAAGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| 3UTR GCA 72 bp | CCAGAAAACAATCTGCTCAAACAAGAGTATCTGCGTTaGTTTTTACACTTAGTTATGTCAAGACCATCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PENNLLKQEYLR*FLHLVMSRPSS Trigger: TGAAGATGGTCTTGACATAACTAAGTGTAAAAAGCAACGCAGATACTCTTGTTTGAGCAGATTGTTTTCTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
||
| CDS-3UTR TCA 90 bp | GTTAGAATTCTCAGGGTTTCCTGGCTACTTGAGCTCCTCATGGAAGGACCACCACGAGCCCCTGGTGTCTaGCCATCTGAGGGTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRILRVSWLLELLMEGPPRAPGV*PSEGAE Trigger: CTCGGCACCCTCAGATGGTCAGACACCAGGGGCTCG...TGGTGGTCCTTCCATGAGGAGCTCAAGTAGCCAGGAAACCCTGAGAATTCTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| CDS-3UTR TCA 90 bp | GAGGGGTCAGACATTTGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAATCGAGCCCCTGGTGTCTaGCCATCTGAGGGTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGSDICLGGTTCKHKQPNRAPGV*PSEGAE Trigger: CTCGGCACCCTCAGATGGTCAGACACCAGGGGCTCG...ATTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCAAATGTCTGACCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCCAAGAGCTATGGTATTGAACACAGAGGATGCAGAGGGCACAAGGCCATGGGGCTCCAGGGTCAGTaGGCAAATGATCCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WPKSYGIEHRGCRGHKAMGLQGQ*ANDPSS Trigger: TGAGCTGGGATCATTTGCCCACTGACCCTGGAGCCC...CATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR GCA 90 bp | CATCTCCACTCTTCAGCATACCTCCCAGGCCCAGGCCTTGAGATAAGGAGGCACCTTTGCAAAGGCCTCTaGAAGGTGAGACCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLHSSAYLPGPGLEIRRHLCKGL*KVRPLE Trigger: TTCCAGAGGTCTCACCTTGCAGAGGCCTTTGCAAAG...GTGCCTCCTTATCTCAAGGCCTGGGCCTGGGAGGTATGCTGAAGAGTGGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| 3UTR CAA 72 bp | TCCCAAGCAGGCTGCTTTCACTCAAAACCCTGGGGGTaGCGCTTCCTCAACATACCACCCACGTGTGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SQAGCFHSKPWG*RFLNIPPTCAL Trigger: TAATGCACACGTGGGTGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTGAGTGAAAGCAGCCTGCTTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| CDS-3UTR CCA 90 bp | TCATTCACAGGTAAATCATCTGTTGCTCCTATGAGGAGGGGTCAGACATTTGCCGTGGGCGTTTCCAGGTaGGGCAGTGGAGCAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SFTGKSSVAPMRRGQTFAVGVSR*GSGAVP Trigger: CGGAACTGCTCCACTGCCCCACCTGGAAACGCCCAC...GGCAAATGTCTGACCCCTCCTCATAGGAGCAACAGATGATTTACCTGTGAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR CCA 90 bp | CATCTCCACTCTTCAGCATACCTCCCAGGCCCAGGCCTTGAGATAAGGAGGCACGCAAGTTTTCCTTGGTaGCTTCCTCTTGCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLHSSAYLPGPGLEIRRHASFPW*LPLAHC Trigger: ACAGTGAGCAAGAGGAAGCCACCAAGGAAAACTTGC...GTGCCTCCTTATCTCAAGGCCTGGGCCTGGGAGGTATGCTGAAGAGTGGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| CDS-3UTR GCA 90 bp | GGGGTCAGACATTTGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAATACTGCTCCCTTGGCCTTTaGAAAGGCCTCTGCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVRHLPRWYHLQAQTTKYCSLGL*KGLCKV Trigger: CACCTTGCAGAGGCCTTTGCAAAGGCCAAGGGAGCA...GTATTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCAAATGTCTGACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGGGTCAGACATTTGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAACAAAACCCTGGGGGTTaGGCTTCCTCAACATACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGVRHLPRWYHLQAQTTKQNPGG*ASSTYH Trigger: GTGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTG...TTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCAAATGTCTGACCCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAACTGGCTGACAGTTCTTAAGTATGCTTGGTGGACATGGCCCTTGTGGCTCCACCTGCTCCCTTaGCCTTTGCAAAGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRNWLTVLKYAWWTWPLWLHLLP*PLQRPL Trigger: CAGAGGCCTTTGCAAAGGCCAAGGGAGCAGGTGGAG...CCACAAGGGCCATGTCCACCAAGCATACTTAAGAACTGTCAGCCAGTTCCTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| CDS-3UTR CCA 90 bp | CACAAGGCCATGGATGAAACTGAGGAAAGGTGCCATGGGAACAGAGTAATGGATCTCCACCTGCTCCCTTaGCCTTTGCAAAGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKAMDETEERCHGNRVMDLHLLP*PLQRPL Trigger: CAGAGGCCTTTGCAAAGGCCAAGGGAGCAGGTGGAG...ATCCATTACTCTGTTCCCATGGCACCTTTCCTCAGTTTCATCCATGGCCTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR CCA 90 bp | CATGGTAGTGGCCCAAGAGCTATGGTATTGAACACAGAGGATGCAGAGGGCACACCAGTCCTCCATGTATaGGGCTTCCTCAGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HGSGPRAMVLNTEDAEGTPVLHV*GFLSFL Trigger: AAGGAAGCTGAGGAAGCCCCATACATGGAGGACTGG...TGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCACTACCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR CCA 90 bp | TCACACTACTGGCTACTTTACAAAGTGACAGGTGTGCAAGCACCGGGAAGGATTGGGCTCCAGGGTCAGTaGGCAAATGATCCCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHYWLLYKVTGVQAPGRIGLQGQ*ANDPSS Trigger: TGAGCTGGGATCATTTGCCCACTGACCCTGGAGCCC...AATCCTTCCCGGTGCTTGCACACCTGTCACTTTGTAAAGTAGCCAGTAGTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTCAGACATTTGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAATACGAGGGTGCCGAGTGGTaGTGCATCATAGGTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVRHLPRWYHLQAQTTKYEGAEW*CIIGGN Trigger: ATTTCCACCTATGATGCATCACCACTCGGCACCCTC...GTATTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCAAATGTCTGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTGTTAAGGGGTCTTCTGGCTGATCACCCACCTGACTTACCAAGCACACTCTGGATAAGTCTCTTCTaGGTAACCTTCCCAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AVLRGLLADHPPDLPSTLWISLF*VTFPVL Trigger: GAGGACTGGGAAGGTTACCCAGAAGAGACTTATCCA...GAGTGTGCTTGGTAAGTCAGGTGGGTGATCAGCCAGAAGACCCCTTAACACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| 3UTR CAA 72 bp | CAGTGGAGCAGTTCCGATCCTCTGCAGTTTTCCCCTTaGAAAGCTGAGGATGAAGGAGGCACAGCACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QWSSSDPLQFSP*KAEDEGGTAHQ Trigger: TTGATGTGCTGTGCCTCCTTCATCCTCAGCTTTCAAAGGGGAAAACTGCAGAGGATCGGAACTGCTCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| CDS-3UTR TCA 90 bp | CACAAGGCCATGGATGAAACTGAGGAAAGGTGCCATGGGAACAGAGTAATGGATGAGGGTGCCGAGTGGTaGTGCATCATAGGTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HKAMDETEERCHGNRVMDEGAEW*CIIGGN Trigger: ATTTCCACCTATGATGCATCACCACTCGGCACCCTC...ATCCATTACTCTGTTCCCATGGCACCTTTCCTCAGTTTCATCCATGGCCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR TCA 90 bp | GTTAGAATTCTCAGGGTTTCCTGGCTACTTGAGCTCCTCATGGAAGGACCACCACCAGCTCAAACGCTCTaGTCCTTCCTCTTCTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRILRVSWLLELLMEGPPPAQTL*SFLFYL Trigger: GAGATAGAAGAGGAAGGATCAGAGCGTTTGAGCTGG...TGGTGGTCCTTCCATGAGGAGCTCAAGTAGCCAGGAAACCCTGAGAATTCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| CDS-3UTR TCA 90 bp | GTTAGAATTCTCAGGGTTTCCTGGCTACTTGAGCTCCTCATGGAAGGACCACCATGTAGCCATCTGCACTaGAACCAGCATTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRILRVSWLLELLMEGPPCSHLH*NQHSLP Trigger: TGGCAGAGAATGCTGGTTTCAGTGCAGATGGCTACA...TGGTGGTCCTTCCATGAGGAGCTCAAGTAGCCAGGAAACCCTGAGAATTCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| CDS-3UTR TCA 90 bp | GAGGGGTCAGACATTTGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAATTGTAGCCATCTGCACTaGAACCAGCATTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGSDICLGGTTCKHKQPNCSHLH*NQHSLP Trigger: TGGCAGAGAATGCTGGTTTCAGTGCAGATGGCTACA...ATTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCAAATGTCTGACCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR GCA 90 bp | TTAAGGAACTGGCTGACAGTTCTTAAGTATGCTTGGTGGACATGGCCCTTGTGGCAAAACCCTGGGGGTTaGGCTTCCTCAACATACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRNWLTVLKYAWWTWPLWQNPGG*ASSTYH Trigger: GTGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTG...CCACAAGGGCCATGTCCACCAAGCATACTTAAGAACTGTCAGCCAGTTCCTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| CDS-3UTR CCA 90 bp | CATGGTAGTGGCCCAAGAGCTATGGTATTGAACACAGAGGATGCAGAGGGCACACCCAAAGCCATAGATTaGAATGATCTGGCCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HGSGPRAMVLNTEDAEGTPKAID*NDLAHQ Trigger: CTGATGGGCCAGATCATTCCAATCTATGGCTTTGGG...TGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCACTACCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| 3UTR CAA 72 bp | TCCTCAGCTTCCTTCTCTGGAGATGTGTCGATGAACTaGCCTTCTTTCATGACCCTGGTGATTTCTCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSASFSGDVSMN*PSFMTLVISRS Trigger: GCTCCGAGAAATCACCAGGGTCATGAAAGAAGGCAAGTTCATCGACACATCTCCAGAGAAGGAAGCTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| 3UTR CAA 72 bp | AAAGTCCTGGGGCAAGTTTTCCTTGGTGGCTTCCTCTaGCTCACTGTAGCCATCTGCACTGAAACCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KVLGQVFLGGFL*LTVAICTETSI Trigger: AATGCTGGTTTCAGTGCAGATGGCTACAGTGAGCAAGAGGAAGCCACCAAGGAAAACTTGCCCCAGGACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147580.8 |
||
| CDS-3UTR TCA 90 bp | CTTGAACTGTTTGACGGCTGTGTCCTTGGTTTTCATAGAGAAGAGAACATGTCTAAGGCCTCTGCAAGGTaGGACCTCTGGAAACGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LELFDGCVLGFHREENMSKASAR*DLWKRA Trigger: GGCTCGTTTCCAGAGGTCTCACCTTGCAGAGGCCTT...AGACATGTTCTCTTCTCTATGAAAACCAAGGACACAGCCGTCAAACAGTTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| CDS-3UTR TCA 90 bp | TCACACTACTGGCTACTTTACAAAGTGACAGGTGTGCAAGCACCGGGAAGGATTCCAGCTCAAACGCTCTaGTCCTTCCTCTTCTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHYWLLYKVTGVQAPGRIPAQTL*SFLFYL Trigger: GAGATAGAAGAGGAAGGATCAGAGCGTTTGAGCTGG...AATCCTTCCCGGTGCTTGCACACCTGTCACTTTGTAAAGTAGCCAGTAGTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR GCA 90 bp | TCACACTACTGGCTACTTTACAAAGTGACAGGTGTGCAAGCACCGGGAAGGATTCTTTGCAAAGGCCTCTaGAAGGTGAGACCTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHYWLLYKVTGVQAPGRILCKGL*KVRPLE Trigger: TTCCAGAGGTCTCACCTTGCAGAGGCCTTTGCAAAG...AATCCTTCCCGGTGCTTGCACACCTGTCACTTTGTAAAGTAGCCAGTAGTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR GCA 90 bp | CATGGTAGTGGCCCAAGAGCTATGGTATTGAACACAGAGGATGCAGAGGGCACAACCAGGATTGTTTCTTaGCTACGCTTGATACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HGSGPRAMVLNTEDAEGTTRIVS*LRLIPS Trigger: GGATGGTATCAAGCGTAGGCAAGAAACAATCCTGGT...TGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCACTACCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR CCA 90 bp | GGTATTGAACACAGAGGATGCAGAGGGCACAAGGCCATGGATGAAACTGAGGAATGGATAAGTCTCTTCTaGGTAACCTTCCCAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GIEHRGCRGHKAMDETEEWISLF*VTFPVL Trigger: GAGGACTGGGAAGGTTACCCAGAAGAGACTTATCCA...TTCCTCAGTTTCATCCATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR CCA 90 bp | CACAAGGCCATGGATGAAACTGAGGAAAGGTGCCATGGGAACAGAGTAATGGATACAGAATTATCTTTCTaGGCTCCAGGGTCAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HKAMDETEERCHGNRVMDTELSF*APGSVG Trigger: GCCCACTGACCCTGGAGCCCAGAAAGATAATTCTGT...ATCCATTACTCTGTTCCCATGGCACCTTTCCTCAGTTTCATCCATGGCCTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR CCA 90 bp | GGTATTGAACACAGAGGATGCAGAGGGCACAAGGCCATGGATGAAACTGAGGAAGCAAGTTTTCCTTGGTaGCTTCCTCTTGCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GIEHRGCRGHKAMDETEEASFPW*LPLAHC Trigger: ACAGTGAGCAAGAGGAAGCCACCAAGGAAAACTTGC...TTCCTCAGTTTCATCCATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR CCA 90 bp | CATGGCCTGGTTCCTGTAGTGATTGCATTTGTGAAGACCATATACAGGGTGTTCGGGGCAAGTTTTCCTTaGTGGCTTCCTCTTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HGLVPVVIAFVKTIYRVFGASFP*WLPLAH Trigger: GTGAGCAAGAGGAAGCCACCAAGGAAAACTTGCCCC...GAACACCCTGTATATGGTCTTCACAAATGCAATCACTACAGGAACCAGGCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| CDS-3UTR CCA 90 bp | TGGCCCAAGAGCTATGGTATTGAACACAGAGGATGCAGAGGGCACAAGGCCATGTCATTTGTAAAGTCCTaGGGCAAGTTTTCCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WPKSYGIEHRGCRGHKAMSFVKS*GKFSLV Trigger: CACCAAGGAAAACTTGCCCCAGGACTTTACAAATGA...CATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTCAGACATTTGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAATACGTGATTTCTCGGAGCTaGTGCAGTAATCGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVRHLPRWYHLQAQTTKYVISRS*CSNRFS Trigger: AGAGAAACGATTACTGCATCAGCTCCGAGAAATCAC...GTATTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCAAATGTCTGACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTGAATTGCAGGGAAATCTGTCTGAAGAATTCACAATCTCTAGCCTTCCTATCCAGCACCTCCACCTaGTCCCTTGGCCTTTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLNCREICLKNSQSLAFLSSTST*SLGLCK Trigger: TTTGCAAAGGCCAAGGGAGCAGGTGGAGGTGCTGGA...TAGGAAGGCTAGAGATTGTGAATTCTTCAGACAGATTTCCCTGCAATTCAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| CDS-3UTR GCA 90 bp | TCACACTACTGGCTACTTTACAAAGTGACAGGTGTGCAAGCACCGGGAAGGATTCTCACTGTAGCCATCTaGACTGAAACCAGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHYWLLYKVTGVQAPGRILTVAI*TETSIL Trigger: GAGAATGCTGGTTTCAGTGCAGATGGCTACAGTGAG...AATCCTTCCCGGTGCTTGCACACCTGTCACTTTGTAAAGTAGCCAGTAGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR GCA 90 bp | GATTCTGTCCCGTGTTCACACTACTGGCTACTTTACAAAGTGACAGGTGTGCAAAGAAGTCACAGCCTGTaGTCTCTCACCATTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSVPCSHYWLLYKVTGVQRSHSL*SLTIRS Trigger: GGACCTAATGGTGAGAGAGCACAGGCTGTGACTTCT...TTGCACACCTGTCACTTTGTAAAGTAGCCAGTAGTGTGAACACGGGACAGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120876.2 |
||
| CDS-3UTR TCA 90 bp | CACAAGGCCATGGATGAAACTGAGGAAAGGTGCCATGGGAACAGAGTAATGGATGTGATTTCTCGGAGCTaGTGCAGTAATCGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HKAMDETEERCHGNRVMDVISRS*CSNRFS Trigger: AGAGAAACGATTACTGCATCAGCTCCGAGAAATCAC...ATCCATTACTCTGTTCCCATGGCACCTTTCCTCAGTTTCATCCATGGCCTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR TCA 90 bp | TCACACTACTGGCTACTTTACAAAGTGACAGGTGTGCAAGCACCGGGAAGGATTTTTCTTGCCTACGCTTaGTACCATCCGAAAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SHYWLLYKVTGVQAPGRIFLAYA*YHPKGH Trigger: ATGACCTTTCGGATGGTATCAAGCGTAGGCAAGAAA...AATCCTTCCCGGTGCTTGCACACCTGTCACTTTGTAAAGTAGCCAGTAGTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR GCA 90 bp | TCATTCACAGGTAAATCATCTGTTGCTCCTATGAGGAGGGGTCAGACATTTGCCCTCACTGTAGCCATCTaGACTGAAACCAGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFTGKSSVAPMRRGQTFALTVAI*TETSIL Trigger: GAGAATGCTGGTTTCAGTGCAGATGGCTACAGTGAG...GGCAAATGTCTGACCCCTCCTCATAGGAGCAACAGATGATTTACCTGTGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
||
| CDS-3UTR CCA 90 bp | CATGGCCTGGTTCCTGTAGTGATTGCATTTGTGAAGACCATATACAGGGTGTTCCCCAAAGCCATAGATTaGAATGATCTGGCCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HGLVPVVIAFVKTIYRVFPKAID*NDLAHQ Trigger: CTGATGGGCCAGATCATTCCAATCTATGGCTTTGGG...GAACACCCTGTATATGGTCTTCACAAATGCAATCACTACAGGAACCAGGCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| CDS-3UTR GCA 90 bp | TCTGCTCAAACAAGAGTATCTGCGTTGCTTTTTACACTTAGTTATGTCAAGACCTGCTCCCTTGGCCTTTaGAAAGGCCTCTGCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SAQTRVSALLFTLSYVKTCSLGL*KGLCKV Trigger: CACCTTGCAGAGGCCTTTGCAAAGGCCAAGGGAGCA...GGTCTTGACATAACTAAGTGTAAAAAGCAACGCAGATACTCTTGTTTGAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
||
| CDS-3UTR CCA 90 bp | TCTGTGCTCCTACAGTTTAGGGTCCACACTATAATGAATAAAACAGCTACCACATTGGTAATCTTCCTGTaGGCGTTTCCAGGTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLLQFRVHTIMNKTATTLVIFL*AFPGGA Trigger: TGCCCCACCTGGAAACGCCCACAGGAAGATTACCAA...TGTGGTAGCTGTTTTATTCATTATAGTGTGGACCCTAAACTGTAGGAGCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
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| CDS-3UTR CCA 90 bp | TGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAATACAATTACCGAGTGGAGTAATCGTTTCTCTTaGTCAGAAGTCACAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: CLGGTTCKHKQPNTITEWSNRFS*SEVTAC Trigger: ACAGGCTGTGACTTCTGACCAAGAGAAACGATTACT...CCACTCGGTAATTGTATTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CCA 90 bp | TCATTCACAGGTAAATCATCTGTTGCTCCTATGAGGAGGGGTCAGACATTTGCCTCATTTGTAAAGTCCTaGGGCAAGTTTTCCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SFTGKSSVAPMRRGQTFASFVKS*GKFSLV Trigger: CACCAAGGAAAACTTGCCCCAGGACTTTACAAATGA...GGCAAATGTCTGACCCCTCCTCATAGGAGCAACAGATGATTTACCTGTGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR GCA 90 bp | AGCCTGAATTGCAGGGAAATCTGTCTGAAGAATTCACAATCTCTAGCCTTCCTAACCAGGATTGTTTCTTaGCTACGCTTGATACCATCC | + |
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Preference number: 4 (lower is better) Translates to: SLNCREICLKNSQSLAFLTRIVS*LRLIPS Trigger: GGATGGTATCAAGCGTAGGCAAGAAACAATCCTGGT...TAGGAAGGCTAGAGATTGTGAATTCTTCAGACAGATTTCCCTGCAATTCAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
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| CDS-3UTR CCA 90 bp | TCATTCTTAAAACTTAAGTCCTCAATATCAGCTAACCCAGTTCTCTTTCACGGTTTGGTAATCTTCCTGTaGGCGTTTCCAGGTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SFLKLKSSISANPVLFHGLVIFL*AFPGGA Trigger: TGCCCCACCTGGAAACGCCCACAGGAAGATTACCAA...ACCGTGAAAGAGAACTGGGTTAGCTGATATTGAGGACTTAAGTTTTAAGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CCA 90 bp | TGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAATACAATTACCGAGTGGCGAAAGGTCATATATTaGATAAGTCTCTTCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: CLGGTTCKHKQPNTITEWRKVIY*ISLFWV Trigger: TACCCAGAAGAGACTTATCCAATATATGACCTTTCG...CCACTCGGTAATTGTATTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CCA 90 bp | TCATTCTTAAAACTTAAGTCCTCAATATCAGCTAACCCAGTTCTCTTTCACGGTGGGGCAAGTTTTCCTTaGTGGCTTCCTCTTGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: SFLKLKSSISANPVLFHGGASFP*WLPLAH Trigger: GTGAGCAAGAGGAAGCCACCAAGGAAAACTTGCCCC...ACCGTGAAAGAGAACTGGGTTAGCTGATATTGAGGACTTAAGTTTTAAGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| 3UTR CAA 72 bp | TTCTGCACAATTTCAATCAAACATTCTACACAGGGATaGGTACAGTGCAGCGTTTGTGTTTCTCTAGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: FCTISIKHSTQG*VQCSVCVSLVP Trigger: CGGGACTAGAGAAACACAAACGCTGCACTGTACCAATCCCTGTGTAGAATGTTTGATTGAAATTGTGCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR CAA 72 bp | TGCTTAAGGAGCCAATCCAGAATTCCACAGCCTGAATaGCAGGGAAATCTGTCTGAAGAATTCACAATCTCT | + |
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Preference number: 4 (lower is better) Translates to: CLRSQSRIPQPE*QGNLSEEFTIS Trigger: AGAGATTGTGAATTCTTCAGACAGATTTCCCTGCAATTCAGGCTGTGGAATTCTGGATTGGCTCCTTAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| CDS-3UTR CCA 90 bp | TTCTTTCCAGAGTGTCTGAGTGAAGACCATTATTGCTTAAGTCTAAATACAAAGCCAGTCCTCCATGTATaGGGCTTCCTCAGCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: FFPECLSEDHYCLSLNTKPVLHV*GFLSFL Trigger: AAGGAAGCTGAGGAAGCCCCATACATGGAGGACTGG...CTTTGTATTTAGACTTAAGCAATAATGGTCTTCACTCAGACACTCTGGAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
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| 3UTR CAA 72 bp | TGCCCCATAGGTCACTGGAGACCTAATGGTAAGGCCTaGATGAAACCCTTAATATTGAGAAATGAAGATCAT | + |
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Preference number: 4 (lower is better) Translates to: CPIGHWRPNGKA*MKPLILRNEDH Trigger: ATGATCTTCATTTCTCAATATTAAGGGTTTCATCAAGGCCTTACCATTAGGTCTCCAGTGACCTATGGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| CDS-3UTR CCA 90 bp | TCTTCATTCTTAAAACTTAAGTCCTCAATATCAGCTAACCCAGTTCTCTTTCACACAGAATTATCTTTCTaGGCTCCAGGGTCAGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SSFLKLKSSISANPVLFHTELSF*APGSVG Trigger: GCCCACTGACCCTGGAGCCCAGAAAGATAATTCTGT...GTGAAAGAGAACTGGGTTAGCTGATATTGAGGACTTAAGTTTTAAGAATGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CCA 90 bp | CTTGAACTGTTTGACGGCTGTGTCCTTGGTTTTCATAGAGAAGAGAACATGTCTCGAAAGGTCATATATTaGATAAGTCTCTTCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LELFDGCVLGFHREENMSRKVIY*ISLFWV Trigger: TACCCAGAAGAGACTTATCCAATATATGACCTTTCG...AGACATGTTCTCTTCTCTATGAAAACCAAGGACACAGCCGTCAAACAGTTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
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| 3UTR CAA 72 bp | TCTAGCCACAGAAGACATTCAGAGTTGCCTCTAGATTaGGCAGTTCTGTTCAACAGAATAAAGACAAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SSHRRHSELPLD*AVLFNRIKTKE Trigger: TTCCTTTGTCTTTATTCTGTTGAACAGAACTGCCAAATCTAGAGGCAACTCTGAATGTCTTCTGTGGCTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR CAA 72 bp | GTGGTACCCTTTGAAGTGAAGGAATGGCCTGGTTTTTaGATACTACAAAGTGTTTTAGACATGCTAATGGTT | + |
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Preference number: 4 (lower is better) Translates to: VVPFEVKEWPGF*ILQSVLDMLMV Trigger: AACCATTAGCATGTCTAAAACACTTTGTAGTATCAAAAAACCAGGCCATTCCTTCACTTCAAAGGGTACCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR CAA 72 bp | GTACAGACATGTATCAACACATTAAACTTGAACTGTTaGACGGCTGTGTCCTTGGTTTTCATAGAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: VQTCINTLNLNC*TAVSLVFIEKR Trigger: TCTCTTCTCTATGAAAACCAAGGACACAGCCGTCAAACAGTTCAAGTTTAATGTGTTGATACATGTCTGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| CDS-3UTR CCA 90 bp | TTATGTCAAGACCATCTTCAGTACATGTTCAACTGCATTCTGCACAATTTCAATAGTAATCGTTTCTCTTaGTCAGAAGTCACAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LCQDHLQYMFNCILHNFNSNRFS*SEVTAC Trigger: ACAGGCTGTGACTTCTGACCAAGAGAAACGATTACT...ATTGAAATTGTGCAGAATGCAGTTGAACATGTACTGAAGATGGTCTTGACATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
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| 3UTR CAA 72 bp | CAACTTAAGGGGCTTAGAATCACCATGAAAACATACTaGTCTATGAAGGTGTTTACAAGAAAGTTAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: QLKGLRITMKTY*SMKVFTRKLVE Trigger: CTCAACTAACTTTCTTGTAAACACCTTCATAGACAAGTATGTTTTCATGGTGATTCTAAGCCCCTTAAGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| 3UTR CAA 72 bp | AGAGGAAAATCTTTATTTATACCTATTACCTCTGGTTaGCTCTTGATTGCCAACTTAAGGGGCTTAGAATCA | + |
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Preference number: 4 (lower is better) Translates to: RGKSLFIPITSG*LLIANLRGLES Trigger: TGATTCTAAGCCCCTTAAGTTGGCAATCAAGAGCAAACCAGAGGTAATAGGTATAAATAAAGATTTTCCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000147580.8 |
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| CDS CCA 90 bp | GGCCCGGCGGCGGCTCCGGTCGCTTCCCGCGAGACAAGAAGGCCTTaGGCAGCAGCAGCGACACGGCCAGGACGAGCCCCGAGGCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: GPAAAPVASRETRRP*AAAATRPGRAPRPA Trigger: CGCTGGCCTCGGGGCTCGTCCTGGCCGTGTCGCTGCTGCTGCCCAAGGCCTTCTTGTCTCGCGGGAAGCGACCGGAGCCGCCGCCGGGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS GCA 90 bp | TCCTCCAGCACCTCCACCTGCTCCCTTGGCCTTTGCAAAGGCCTCTaGAAGGTGAGACCTCTGGAAACGAGCCCCTGGTGTCTGACCATC | + |
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Preference number: 5 (lower is better) Translates to: SSSTSTCSLGLCKGL*KVRPLETSPWCLTI Trigger: GATGGTCAGACACCAGGGGCTCGTTTCCAGAGGTCTCACCTTGCAGAGGCCTTTGCAAAGGCCAAGGGAGCAGGTGGAGGTGCTGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CAA 90 bp | TGGCCCAAGAGCTATGGTATTGAACACAGAGGATGCAGAGGGCACAAGGCCATGGAGCATGATTCTGGTTaGGGATCACACGGGGCAACA | + |
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Preference number: 5 (lower is better) Translates to: WPKSYGIEHRGCRGHKAMEHDSG*GSHGAT Trigger: TGTTGCCCCGTGTGATCCCAAACCAGAATCATGCTC...CATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CAA 90 bp | CATGGTAGTGGCCCAAGAGCTATGGTATTGAACACAGAGGATGCAGAGGGCACATCAAAACCCTGGGGGTaGCGCTTCCTCAACATACCA | + |
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Preference number: 5 (lower is better) Translates to: HGSGPRAMVLNTEDAEGTSKPWG*RFLNIP Trigger: TGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTGA...TGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCACTACCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CAA 90 bp | GAGGGGTCAGACATTTGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAATTGGGGCAAGTTTTCCTaGGTGGCTTCCTCTTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: EGSDICLGGTTCKHKQPNWGKFS*VASSCS Trigger: TGAGCAAGAGGAAGCCACCAAGGAAAACTTGCCCCA...ATTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCAAATGTCTGACCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CAA 90 bp | CTTAAGCAGTCCTGTAGCTTCAACAGCCTCAAACTTCAGCTCTGTGGGACACAGTCAAAACCCTGGGGGTaGCGCTTCCTCAACATACCA | + |
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Preference number: 5 (lower is better) Translates to: LKQSCSFNSLKLQLCGTQSKPWG*RFLNIP Trigger: TGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTGA...CTGTGTCCCACAGAGCTGAAGTTTGAGGCTGTTGAAGCTACAGGACTGCTTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
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| CDS-3UTR CAA 90 bp | CATGGTAGTGGCCCAAGAGCTATGGTATTGAACACAGAGGATGCAGAGGGCACAGATGTGTCGATGAACTaGCCTTCTTTCATGACCCTG | + |
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Preference number: 5 (lower is better) Translates to: HGSGPRAMVLNTEDAEGTDVSMN*PSFMTL Trigger: CAGGGTCATGAAAGAAGGCAAGTTCATCGACACATC...TGTGCCCTCTGCATCCTCTGTGTTCAATACCATAGCTCTTGGGCCACTACCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CAA 90 bp | TCACACTACTGGCTACTTTACAAAGTGACAGGTGTGCAAGCACCGGGAAGGATTTGGGGCAAGTTTTCCTaGGTGGCTTCCTCTTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SHYWLLYKVTGVQAPGRIWGKFS*VASSCS Trigger: TGAGCAAGAGGAAGCCACCAAGGAAAACTTGCCCCA...AATCCTTCCCGGTGCTTGCACACCTGTCACTTTGTAAAGTAGCCAGTAGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CAA 90 bp | GTTAGAATTCTCAGGGTTTCCTGGCTACTTGAGCTCCTCATGGAAGGACCACCAGTTTCTTGCCTACGCTaGATACCATCCGAAAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: VRILRVSWLLELLMEGPPVSCLR*IPSERS Trigger: TGACCTTTCGGATGGTATCAAGCGTAGGCAAGAAAC...TGGTGGTCCTTCCATGAGGAGCTCAAGTAGCCAGGAAACCCTGAGAATTCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
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| CDS-3UTR CAA 90 bp | GGTATTGAACACAGAGGATGCAGAGGGCACAAGGCCATGGATGAAACTGAGGAACACCAGGATTGTTTCTaGCCTACGCTTGATACCATC | + |
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Preference number: 5 (lower is better) Translates to: GIEHRGCRGHKAMDETEEHQDCF*PTLDTI Trigger: GATGGTATCAAGCGTAGGCAAGAAACAATCCTGGTG...TTCCTCAGTTTCATCCATGGCCTTGTGCCCTCTGCATCCTCTGTGTTCAATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CAA 90 bp | TGCCTAGGTGGTACCACCTGCAAGCACAAACAACCAAATACAATTACCGAGTGGGATGTGTCGATGAACTaGCCTTCTTTCATGACCCTG | + |
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Preference number: 5 (lower is better) Translates to: CLGGTTCKHKQPNTITEWDVSMN*PSFMTL Trigger: CAGGGTCATGAAAGAAGGCAAGTTCATCGACACATC...CCACTCGGTAATTGTATTTGGTTGTTTGTGCTTGCAGGTGGTACCACCTAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CAA 90 bp | TCACACTACTGGCTACTTTACAAAGTGACAGGTGTGCAAGCACCGGGAAGGATTCCGAAAGGTCATATATaGGATAAGTCTCTTCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SHYWLLYKVTGVQAPGRIPKGHI*DKSLLG Trigger: ACCCAGAAGAGACTTATCCAATATATGACCTTTCGG...AATCCTTCCCGGTGCTTGCACACCTGTCACTTTGTAAAGTAGCCAGTAGTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS-3UTR CAA 90 bp | GAACACATGCAGAGGAAAATCTTTATTTATACCTATTACCTCTGGTTTGCTCTTGAGCATGATTCTGGTTaGGGATCACACGGGGCAACA | + |
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Preference number: 5 (lower is better) Translates to: EHMQRKIFIYTYYLWFALEHDSG*GSHGAT Trigger: TGTTGCCCCGTGTGATCCCAAACCAGAATCATGCTC...AAGAGCAAACCAGAGGTAATAGGTATAAATAAAGATTTTCCTCTGCATGTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055993.13 |
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| CDS-3UTR CAA 90 bp | TCATTCTTAAAACTTAAGTCCTCAATATCAGCTAACCCAGTTCTCTTTCACGGTCCGAAAGGTCATATATaGGATAAGTCTCTTCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SFLKLKSSISANPVLFHGPKGHI*DKSLLG Trigger: ACCCAGAAGAGACTTATCCAATATATGACCTTTCGG...ACCGTGAAAGAGAACTGGGTTAGCTGATATTGAGGACTTAAGTTTTAAGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS CAA 90 bp | GGGCCCGGCGGCGGCTCCGGTCGCTTCCCGCGAGACAAGAAGGCCTaGGGCAGCAGCAGCGACACGGCCAGGACGAGCCCCGAGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GPGGGSGRFPRDKKA*GSSSDTARTSPEAS Trigger: GCTGGCCTCGGGGCTCGTCCTGGCCGTGTCGCTGCTGCTGCCCAAGGCCTTCTTGTCTCGCGGGAAGCGACCGGAGCCGCCGCCGGGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS CCA 72 bp | GCGGCTCCGGTCGCTTCCCGCGAGACAAGAAGGCCTTaGGCAGCAGCAGCGACACGGCCAGGACGAGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: AAPVASRETRRP*AAAATRPGRAP Trigger: CGGGGCTCGTCCTGGCCGTGTCGCTGCTGCTGCCCAAGGCCTTCTTGTCTCGCGGGAAGCGACCGGAGCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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| CDS GCA 72 bp | ACCTCCACCTGCTCCCTTGGCCTTTGCAAAGGCCTCTaGAAGGTGAGACCTCTGGAAACGAGCCCCTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: TSTCSLGLCKGL*KVRPLETSPWC Trigger: ACACCAGGGGCTCGTTTCCAGAGGTCTCACCTTGCAGAGGCCTTTGCAAAGGCCAAGGGAGCAGGTGGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055993.13 ENSMUST00000120876.2 |
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