Pregenerated sensors for RIBC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022431Ensembl transcript IDs: ENSMUST00000023067.4, ENSMUST00000229238.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCGAAGCAAGCGCTGCTGCTGCCGCTCATGCAGCAGGCTGGCATaGGCCTTCCGGATCCTGCGCAAATCCCAGTCCATGCTGTGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: SRSKRCCCRSCSRLA*AFRILRKSQSMLCW Trigger: CCAGCACAGCATGGACTGGGATTTGCGCAGGATCCGGAAGGCTCATGCCAGCCTGCTGCATGAGCGGCAGCAGCAGCGCTTGCTTCGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR CCA 90 bp | GCTGCTCCCGAAGCAAGCGCTGCTGCTGCCGCTCATGCAGCAGGCTaGCATGAGCCTTCCGGATCCTGCGCAAATCCCAGTCCATGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: AAPEASAAAAAHAAG*HEPSGSCANPSPCC Trigger: ACAGCATGGACTGGGATTTGCGCAGGATCCGGAAGGCTCATGCCAGCCTGCTGCATGAGCGGCAGCAGCAGCGCTTGCTTCGGGAGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR GCA 90 bp | GCTGCTGCCGCTCATGCAGCAGGCTGGCATGAGCCTTCCGGATCCTaGGCAAATCCCAGTCCATGCTGTGCTGGCGCTCTTCCTCCTGAA | + |
|
Preference number: 1 (lower is better) Translates to: AAAAHAAGWHEPSGS*ANPSPCCAGALPPE Trigger: TTCAGGAGGAAGAGCGCCAGCACAGCATGGACTGGGATTTGCGCAGGATCCGGAAGGCTCATGCCAGCCTGCTGCATGAGCGGCAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR TCA 90 bp | AGCTGCTCTCGGTTCATGCCCTTCCAGCGGTCAAGGACCACACGGTaGGACCCAAAGGAGCTGGCCACCGGTCGAGGGTTCTCAGAAAGC | + |
|
Preference number: 1 (lower is better) Translates to: SCSRFMPFQRSRTTR*DPKELATGRGFSES Trigger: GCTTTCTGAGAACCCTCGACCGGTGGCCAGCTCCTTTGGGTCTCACCGTGTGGTCCTTGACCGCTGGAAGGGCATGAACCGAGAGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR CCA 90 bp | TGCCCTTCCAGCGGTCAAGGACCACACGGTGAGACCCAAAGGAGCTaGCCACCGGTCGAGGGTTCTCAGAAAGCAGGTCTCCATGCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: CPSSGQGPHGETQRS*PPVEGSQKAGLHAA Trigger: TGCTGCATGGAGACCTGCTTTCTGAGAACCCTCGACCGGTGGCCAGCTCCTTTGGGTCTCACCGTGTGGTCCTTGACCGCTGGAAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR TCA 90 bp | CTTCCTCCTGAAGCCTCAGCTTCTCCTGGATTTGCCGCTTCTGCGTaGACCAGATCTCCTCCAGCTGCTCTCGGTTCATGCCCTTCCAGC | + |
|
Preference number: 1 (lower is better) Translates to: LPPEASASPGFAASA*TRSPPAALGSCPSS Trigger: GCTGGAAGGGCATGAACCGAGAGCAGCTGGAGGAGATCTGGTTCACGCAGAAGCGGCAAATCCAGGAGAAGCTGAGGCTTCAGGAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR TCA 90 bp | ATCCTGCGCAAATCCCAGTCCATGCTGTGCTGGCGCTCTTCCTCCTaGAGCCTCAGCTTCTCCTGGATTTGCCGCTTCTGCGTGAACCAG | + |
|
Preference number: 1 (lower is better) Translates to: ILRKSQSMLCWRSSS*SLSFSWICRFCVNQ Trigger: CTGGTTCACGCAGAAGCGGCAAATCCAGGAGAAGCTGAGGCTTCAGGAGGAAGAGCGCCAGCACAGCATGGACTGGGATTTGCGCAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR GCA 90 bp | AAGGAGCTGGCCACCGGTCGAGGGTTCTCAGAAAGCAGGTCTCCATaGAGCAGGTTGGTGATCTCGGTCATGTTGTCTTCTTGTTCTTGT | + |
|
Preference number: 1 (lower is better) Translates to: KELATGRGFSESRSP*SRLVISVMLSSCSC Trigger: ACAAGAACAAGAAGACAACATGACCGAGATCACCAACCTGCTGCATGGAGACCTGCTTTCTGAGAACCCTCGACCGGTGGCCAGCTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR TCA 90 bp | CCGGTCGAGGGTTCTCAGAAAGCAGGTCTCCATGCAGCAGGTTGGTaGTCTCGGTCATGTTGTCTTCTTGTTCTTGTTGCTTCTCTTGCC | + |
|
Preference number: 1 (lower is better) Translates to: PVEGSQKAGLHAAGW*SRSCCLLVLVASLA Trigger: GGCAAGAGAAGCAACAAGAACAAGAAGACAACATGACCGAGATCACCAACCTGCTGCATGGAGACCTGCTTTCTGAGAACCCTCGACCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR CCA 90 bp | TTGGAGCTTGAGCAGCACACAGGCCTCAGTGTAGCCTCTCTGGAATaGTTCACTGTGTCCTATGTCCACAGCACCCAAAGCCATGTTAGA | + |
|
Preference number: 1 (lower is better) Translates to: LELEQHTGLSVASLE*FTVSYVHSTQSHVR Trigger: TCTAACATGGCTTTGGGTGCTGTGGACATAGGACACAGTGAACCATTCCAGAGAGGCTACACTGAGGCCTGTGTGCTGCTCAAGCTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCGCTGCTCCCGAAGCAAGCGCTGCTGCTGCCGCTCATGCAGCAGGCTGGCAGCCTCAGCTTCTCCTaGATTTGCCGCTTCTGCGTG | + |
|
Preference number: 2 (lower is better) Translates to: PALLPKQALLLPLMQQAGSLSFS*ICRFCV Trigger: CACGCAGAAGCGGCAAATCCAGGAGAAGCTGAGGCT...GCCAGCCTGCTGCATGAGCGGCAGCAGCAGCGCTTGCTTCGGGAGCAGCGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCCTGCGCTGCTCCCGAAGCAAGCGCTGCTGCTGCCGCTCATGCAGCAGGCTGGAAAGCAGGTCTCCATaGAGCAGGTTGGTGATCTCG | + |
|
Preference number: 2 (lower is better) Translates to: ALRCSRSKRCCCRSCSRLESRSP*SRLVIS Trigger: CGAGATCACCAACCTGCTGCATGGAGACCTGCTTTC...CAGCCTGCTGCATGAGCGGCAGCAGCAGCGCTTGCTTCGGGAGCAGCGCAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR CAA 90 bp | GCCACCGGTCGAGGGTTCTCAGAAAGCAGGTCTCCATGCAGCAGGTaGGTGATCTCGGTCATGTTGTCTTCTTGTTCTTGTTGCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ATGRGFSESRSPCSR*VISVMLSSCSCCFS Trigger: AGAGAAGCAACAAGAACAAGAAGACAACATGACCGAGATCACCAACCTGCTGCATGGAGACCTGCTTTCTGAGAACCCTCGACCGGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR-3UTR CCA 90 bp | TCACTGAGTCAGAGAATGGCTGAGCAGCCAGCTTGGAGCTTGAGCAGCACACAGGTAGCCTCTCTGGAATaGTTCACTGTGTCCTATGTC | + |
|
Preference number: 2 (lower is better) Translates to: SLSQRMAEQPAWSLSSTQVASLE*FTVSYV Trigger: GACATAGGACACAGTGAACCATTCCAGAGAGGCTAC...CTGTGTGCTGCTCAAGCTCCAAGCTGGCTGCTCAGCCATTCTCTGACTCAGTGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| 3UTR-3UTR GCA 90 bp | TCCTGGATTTGCCGCTTCTGCGTGAACCAGATCTCCTCCAGCTGCTCTCGGTTCTCTTGTTGCTTCTCTTaGCTCTTTCTTTCTGTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: SWICRFCVNQISSSCSRFSCCFS*LFLSVN Trigger: GTTGACAGAAAGAAAGAGGCAAGAGAAGCAACAAGA...GAACCGAGAGCAGCTGGAGGAGATCTGGTTCACGCAGAAGCGGCAAATCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR CAA 90 bp | ATGCAGCAGGTTGGTGATCTCGGTCATGTTGTCTTCTTGTTCTTGTaGCTTCTCTTGCCTCTTTCTTTCTGTCAACTCCACAACCAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: MQQVGDLGHVVFLFL*LLLPLSFCQLHNQA Trigger: GGCCTGGTTGTGGAGTTGACAGAAAGAAAGAGGCAAGAGAAGCAACAAGAACAAGAAGACAACATGACCGAGATCACCAACCTGCTGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR TCA 72 bp | CGGTTCATGCCCTTCCAGCGGTCAAGGACCACACGGTaGGACCCAAAGGAGCTGGCCACCGGTCGAGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RFMPFQRSRTTR*DPKELATGRGF Trigger: GAACCCTCGACCGGTGGCCAGCTCCTTTGGGTCTCACCGTGTGGTCCTTGACCGCTGGAAGGGCATGAACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR TCA 72 bp | AAGCGCTGCTGCTGCCGCTCATGCAGCAGGCTGGCATaGGCCTTCCGGATCCTGCGCAAATCCCAGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: KRCCCRSCSRLA*AFRILRKSQSM Trigger: CATGGACTGGGATTTGCGCAGGATCCGGAAGGCTCATGCCAGCCTGCTGCATGAGCGGCAGCAGCAGCGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR CCA 72 bp | GAAGCAAGCGCTGCTGCTGCCGCTCATGCAGCAGGCTaGCATGAGCCTTCCGGATCCTGCGCAAATCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EASAAAAAHAAG*HEPSGSCANPS Trigger: ACTGGGATTTGCGCAGGATCCGGAAGGCTCATGCCAGCCTGCTGCATGAGCGGCAGCAGCAGCGCTTGCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR GCA 72 bp | GCTCATGCAGCAGGCTGGCATGAGCCTTCCGGATCCTaGGCAAATCCCAGTCCATGCTGTGCTGGCGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AHAAGWHEPSGS*ANPSPCCAGAL Trigger: AAGAGCGCCAGCACAGCATGGACTGGGATTTGCGCAGGATCCGGAAGGCTCATGCCAGCCTGCTGCATGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR GCA 72 bp | ATTTGCCGCTTCTGCGTGAACCAGATCTCCTCCAGCTaGTCTCGGTTCATGCCCTTCCAGCGGTCAAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: ICRFCVNQISSS*SRFMPFQRSRT Trigger: GGTCCTTGACCGCTGGAAGGGCATGAACCGAGAGCAGCTGGAGGAGATCTGGTTCACGCAGAAGCGGCAAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCCCGAAGCAAGCGCTGCTGCTGCCGCTCATGCAGCAGGCTGGCATGAGCGTTGTCTTCTTGTTCTaGTTGCTTCTCTTGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLPKQALLLPLMQQAGMSVVFLF*LLLLPL Trigger: AAGAGGCAAGAGAAGCAACAAGAACAAGAAGACAAC...GCTCATGCCAGCCTGCTGCATGAGCGGCAGCAGCAGCGCTTGCTTCGGGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCCCGAAGCAAGCGCTGCTGCTGCCGCTCATGCAGCAGGCTGGCATGAGCGGTCATGTTGTCTTCTaGTTCTTGTTGCTTCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLPKQALLLPLMQQAGMSGHVVF*FLLLLL Trigger: CAAGAGAAGCAACAAGAACAAGAAGACAACATGACC...GCTCATGCCAGCCTGCTGCATGAGCGGCAGCAGCAGCGCTTGCTTCGGGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR TCA 72 bp | GAAGCCTCAGCTTCTCCTGGATTTGCCGCTTCTGCGTaGACCAGATCTCCTCCAGCTGCTCTCGGTTCATGC | + |
|
Preference number: 3 (lower is better) Translates to: EASASPGFAASA*TRSPPAALGSC Trigger: GCATGAACCGAGAGCAGCTGGAGGAGATCTGGTTCACGCAGAAGCGGCAAATCCAGGAGAAGCTGAGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR GCA 72 bp | GCCACCGGTCGAGGGTTCTCAGAAAGCAGGTCTCCATaGAGCAGGTTGGTGATCTCGGTCATGTTGTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ATGRGFSESRSP*SRLVISVMLSS Trigger: AGAAGACAACATGACCGAGATCACCAACCTGCTGCATGGAGACCTGCTTTCTGAGAACCCTCGACCGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR CCA 72 bp | GAGCAGCACACAGGCCTCAGTGTAGCCTCTCTGGAATaGTTCACTGTGTCCTATGTCCACAGCACCCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: EQHTGLSVASLE*FTVSYVHSTQS Trigger: GCTTTGGGTGCTGTGGACATAGGACACAGTGAACCATTCCAGAGAGGCTACACTGAGGCCTGTGTGCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGGATTTGCCGCTTCTGCGTGAACCAGATCTCCTCCAGCTGCTCTCGGTTCATTCTCCATGCAGCAGGTaGGTGATCTCGGTCATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LDLPLLREPDLLQLLSVHSPCSR*VISVML Trigger: CAACATGACCGAGATCACCAACCTGCTGCATGGAGA...ATGAACCGAGAGCAGCTGGAGGAGATCTGGTTCACGCAGAAGCGGCAAATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR TCA 72 bp | GGAGTGGTAAGCAGGTTGGTGCCTCTTTATGGTGGGTaGGAAGCTGAGGAAGAAGTGCTTCATGGGGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: GVVSRLVPLYGG*EAEEEVLHGAH Trigger: GTGTGCCCCATGAAGCACTTCTTCCTCAGCTTCTCACCCACCATAAAGAGGCACCAACCTGCTTACCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAAAGGAGCTGGCCACCGGTCGAGGGTTCTCAGAAAGCAGGTCTCCATGCAGTCTTCTTGTTCTTGTaGCTTCTCTTGCCTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TQRSWPPVEGSQKAGLHAVFLFL*LLLPLS Trigger: AGAAAGAGGCAAGAGAAGCAACAAGAACAAGAAGAC...TGCATGGAGACCTGCTTTCTGAGAACCCTCGACCGGTGGCCAGCTCCTTTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| 3UTR TCA 72 bp | GGTTCTCAGAAAGCAGGTCTCCATGCAGCAGGTTGGTaGTCTCGGTCATGTTGTCTTCTTGTTCTTGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GSQKAGLHAAGW*SRSCCLLVLVA Trigger: AGCAACAAGAACAAGAAGACAACATGACCGAGATCACCAACCTGCTGCATGGAGACCTGCTTTCTGAGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCGCTGCTCCCGAAGCAAGCGCTGCTGCTGCCGCTCATGCAGCAGGCTGGCCACAGCTGTTTCCTGTaGCTCTGTTCCCGGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PALLPKQALLLPLMQQAGHSCFL*LCSRSC Trigger: GCATGACCGGGAACAGAGGCACAGGAAACAGCTGTG...GCCAGCCTGCTGCATGAGCGGCAGCAGCAGCGCTTGCTTCGGGAGCAGCGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR TCA 90 bp | GCTCATGCAGCAGGCTGGCATGAGCCTTCCGGATCCTGCGCAAATCCCAGTCCAGTGTGTCTCCCCCAATaGTCCTGTTCCTGGCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: AHAAGWHEPSGSCANPSPVCLPQ*SCSWRR Trigger: TCGACGCCAGGAACAGGATCATTGGGGGAGACACAC...TGGACTGGGATTTGCGCAGGATCCGGAAGGCTCATGCCAGCCTGCTGCATGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGACCGCATGTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGATCAAGGACCACACGGTaGGACCCAAAGGAGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EPDRMCTCPYGVFRPRSRSRTTR*DPKELA Trigger: GGCCAGCTCCTTTGGGTCTCACCGTGTGGTCCTTGA...TCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCACATGCGGTCAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGACCGCATGTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGATGGCGCTCTTCCTCCTaGAGCCTCAGCTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EPDRMCTCPYGVFRPRSRWRSSS*SLSFSW Trigger: CCAGGAGAAGCTGAGGCTTCAGGAGGAAGAGCGCCA...TCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCACATGCGGTCAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | GCCCTTCCAGCGGTCAAGGACCACACGGTGAGACCCAAAGGAGCTGGCCACCGGTTCTCCCGTTCCCCATaGTGCTGCAGAAACCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALPAVKDHTVRPKGAGHRFSRSP*CCRNHS Trigger: AGAATGGTTTCTGCAGCAGCATGGGGAACGGGAGAA...CCGGTGGCCAGCTCCTTTGGGTCTCACCGTGTGGTCCTTGACCGCTGGAAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR GCA 90 bp | GGTGAGACCCAAAGGAGCTGGCCACCGGTCGAGGGTTCTCAGAAAGCAGGTCTCACTTCTCCAGAACCATaGGTGCTGCCGCGCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GETQRSWPPVEGSQKAGLTSPEP*VLPRSH Trigger: ATGGGAGCGCGGCAGCACGCATGGTTCTGGAGAAGT...GAGACCTGCTTTCTGAGAACCCTCGACCGGTGGCCAGCTCCTTTGGGTCTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR CCA 90 bp | GTTCATGCCCTTCCAGCGGTCAAGGACCACACGGTGAGACCCAAAGGAGCTGGCGCTGGAAGCTCTTTCTaGAGGGCCAGGGGGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHALPAVKDHTVRPKGAGAGSSF*RARGSE Trigger: TTCTGACCCCCTGGCCCTCCAGAAAGAGCTTCCAGC...GCCAGCTCCTTTGGGTCTCACCGTGTGGTCCTTGACCGCTGGAAGGGCATGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR CCA 90 bp | GCCCTTCCAGCGGTCAAGGACCACACGGTGAGACCCAAAGGAGCTGGCCACCGGAGACTTCCTTCCTGGTaGAGCCTTCCAGCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ALPAVKDHTVRPKGAGHRRLPSW*SLPASS Trigger: TGATGAAGCTGGAAGGCTCCACCAGGAAGGAAGTCT...CCGGTGGCCAGCTCCTTTGGGTCTCACCGTGTGGTCCTTGACCGCTGGAAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR TCA 90 bp | TTGGAGCTTGAGCAGCACACAGGCCTCAGTGTAGCCTCTCTGGAATGGTTCACTTGCAGCAGGCTGGCATaGGCCTTCCGGATCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LELEQHTGLSVASLEWFTCSRLA*AFRILR Trigger: GCGCAGGATCCGGAAGGCTCATGCCAGCCTGCTGCA...AGTGAACCATTCCAGAGAGGCTACACTGAGGCCTGTGTGCTGCTCAAGCTCCAA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | TTGGAGCTTGAGCAGCACACAGGCCTCAGTGTAGCCTCTCTGGAATGGTTCACTTGCAGTCCAGGGCCCTaGGCTGCTCCCGAAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LELEQHTGLSVASLEWFTCSPGP*AAPEAS Trigger: GCTTGCTTCGGGAGCAGCGCAGGGCCCTGGACTGCA...AGTGAACCATTCCAGAGAGGCTACACTGAGGCCTGTGTGCTGCTCAAGCTCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR CCA 90 bp | GAGCCTGACCGCATGTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGAGCTGGAAGCTCTTTCTaGAGGGCCAGGGGGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPDRMCTCPYGVFRPRSRAGSSF*RARGSE Trigger: TTCTGACCCCCTGGCCCTCCAGAAAGAGCTTCCAGC...TCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCACATGCGGTCAGGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR CCA 90 bp | GAGCCTGACCGCATGTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGACGCAGACTTCCTTCCTaGTGGAGCCTTCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EPDRMCTCPYGVFRPRSRRRLPS*WSLPAS Trigger: TGAAGCTGGAAGGCTCCACCAGGAAGGAAGTCTGCG...TCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCACATGCGGTCAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR TCA 90 bp | GGTGAGACCCAAAGGAGCTGGCCACCGGTCGAGGGTTCTCAGAAAGCAGGTCTCCATGCGCCATGCACATaGCTTTGTCATTGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GETQRSWPPVEGSQKAGLHAPCT*LCHCAS Trigger: TGAAGCACAATGACAAAGTCATGTGCATGGCGCATG...GAGACCTGCTTTCTGAGAACCCTCGACCGGTGGCCAGCTCCTTTGGGTCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCTCAGTGTAGCCTCTCTGGAATGGTTCACTGTGTCCTATGTCCACAGCACGCTGCTCTCGGTTCATaGCCTTCCAGCGGTCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPQCSLSGMVHCVLCPQHAALGS*PSSGQG Trigger: TCCTTGACCGCTGGAAGGGCATGAACCGAGAGCAGC...GTGCTGTGGACATAGGACACAGTGAACCATTCCAGAGAGGCTACACTGAGGCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | TCACTGAGTCAGAGAATGGCTGAGCAGCCAGCTTGGAGCTTGAGCAGCACACAGCAGATCTCCTCCAGCTaGTCTCGGTTCATGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSQRMAEQPAWSLSSTQQISSS*SRFMPF Trigger: GAAGGGCATGAACCGAGAGCAGCTGGAGGAGATCTG...CTGTGTGCTGCTCAAGCTCCAAGCTGGCTGCTCAGCCATTCTCTGACTCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR TCA 90 bp | GACCGCATGTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGATTCACTCAACCTGATTCTTGTTaGACGCTTTCACGGCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DRMCTCPYGVFRPRSRFTQPDSC*TLSRLR Trigger: GCGCAGCCGTGAAAGCGTTCAACAAGAATCAGGTTG...AGTGAATCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCACATGCGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGACCGCATGTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGATTCTGTGGGCTGACTTaGGGAGGCTGTATTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: EPDRMCTCPYGVFRPRSRFCGLT*GGCIHL Trigger: CAAATGAATACAGCCTCCTCAAGTCAGCCCACAGAA...TCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCACATGCGGTCAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | GCCCTTCCAGCGGTCAAGGACCACACGGTGAGACCCAAAGGAGCTGGCCACCGGATGACTTTGTCATTGTaGTTCATTTCAGCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALPAVKDHTVRPKGAGHRMTLSL*FISAAK Trigger: CTTTGCTGCTGAAATGAAGCACAATGACAAAGTCAT...CCGGTGGCCAGCTCCTTTGGGTCTCACCGTGTGGTCCTTGACCGCTGGAAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTTTATGGTGGGTGAGAAGCTGAGGAAGAAGTGCTTCATGGGGCACACGAGCCTCAGCTTCTCCTaGATTTGCCGCTTCTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLFMVGEKLRKKCFMGHTSLSFS*ICRFCV Trigger: CACGCAGAAGCGGCAAATCCAGGAGAAGCTGAGGCT...CGTGTGCCCCATGAAGCACTTCTTCCTCAGCTTCTCACCCACCATAAAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | CTCTTTATGGTGGGTGAGAAGCTGAGGAAGAAGTGCTTCATGGGGCACACGAACCACAGCTGTTTCCTGTaGCTCTGTTCCCGGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LFMVGEKLRKKCFMGHTNHSCFL*LCSRSC Trigger: GCATGACCGGGAACAGAGGCACAGGAAACAGCTGTG...GTTCGTGTGCCCCATGAAGCACTTCTTCCTCAGCTTCTCACCCACCATAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR CCA 90 bp | GGTGAGACCCAAAGGAGCTGGCCACCGGTCGAGGGTTCTCAGAAAGCAGGTCTCTCTGCATTCCTGATATaGTGTTCCGCATGTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GETQRSWPPVEGSQKAGLSAFLI*CSACHC Trigger: ACAATGACATGCGGAACACCATATCAGGAATGCAGA...GAGACCTGCTTTCTGAGAACCCTCGACCGGTGGCCAGCTCCTTTGGGTCTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR CCA 90 bp | TCACTGAGTCAGAGAATGGCTGAGCAGCCAGCTTGGAGCTTGAGCAGCACACAGAGACTTCCTTCCTGGTaGAGCCTTCCAGCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSQRMAEQPAWSLSSTQRLPSW*SLPASS Trigger: TGATGAAGCTGGAAGGCTCCACCAGGAAGGAAGTCT...CTGTGTGCTGCTCAAGCTCCAAGCTGGCTGCTCAGCCATTCTCTGACTCAGTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR CCA 90 bp | GCTTCTCTTGCCTCTTTCTTTCTGTCAACTCCACAACCAGGCCCAGTGTCTGTCCGCAGACTTCCTTCCTaGTGGAGCCTTCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASLASFFLSTPQPGPVSVRRLPS*WSLPAS Trigger: TGAAGCTGGAAGGCTCCACCAGGAAGGAAGTCTGCG...GACAGACACTGGGCCTGGTTGTGGAGTTGACAGAAAGAAAGAGGCAAGAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR TCA 90 bp | GTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGATTCACTTTGAAATAGTGTGTCTCCCCCAATaGTCCTGTTCCTGGCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VHMPIRGVQTKEQIHFEIVCLPQ*SCSWRR Trigger: TCGACGCCAGGAACAGGATCATTGGGGGAGACACAC...TATTTCAAAGTGAATCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | GAGCAGCACACAGGCCTCAGTGTAGCCTCTCTGGAATGGTTCACTGTGTCCTATTTCTCCCGTTCCCCATaGTGCTGCAGAAACCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQHTGLSVASLEWFTVSYFSRSP*CCRNHS Trigger: AGAATGGTTTCTGCAGCAGCATGGGGAACGGGAGAA...ATAGGACACAGTGAACCATTCCAGAGAGGCTACACTGAGGCCTGTGTGCTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | CTCTTTATGGTGGGTGAGAAGCTGAGGAAGAAGTGCTTCATGGGGCACACGAACGAAAGCAGGTCTCCATaGAGCAGGTTGGTGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LFMVGEKLRKKCFMGHTNESRSP*SRLVIS Trigger: CGAGATCACCAACCTGCTGCATGGAGACCTGCTTTC...GTTCGTGTGCCCCATGAAGCACTTCTTCCTCAGCTTCTCACCCACCATAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | CATGTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGATTCACTTTGAACGTTCCCCATGCTGCTaGAGAAACCATTCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HVHMPIRGVQTKEQIHFERSPCC*RNHSLL Trigger: GAGCAGAGAATGGTTTCTGCAGCAGCATGGGGAACG...TTCAAAGTGAATCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | TCTTGCCTCTTTCTTTCTGTCAACTCCACAACCAGGCCCAGTGTCTGTCTCTCACGTTCCCCATGCTGCTaGAGAAACCATTCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SCLFLSVNSTTRPSVCLSRSPCC*RNHSLL Trigger: GAGCAGAGAATGGTTTCTGCAGCAGCATGGGGAACG...TGAGAGACAGACACTGGGCCTGGTTGTGGAGTTGACAGAAAGAAAGAGGCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR CCA 90 bp | CATGTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGATTCACTTTGAACTGCTCTGTTCCTTTTaGAACCTCCTCCTCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HVHMPIRGVQTKEQIHFELLCSF*NLLLSW Trigger: CCAAGAGAGGAGGAGGTTCCAAAAGGAACAGAGCAG...TTCAAAGTGAATCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| 3UTR CAA 72 bp | CGAGGGTTCTCAGAAAGCAGGTCTCCATGCAGCAGGTaGGTGATCTCGGTCATGTTGTCTTCTTGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGFSESRSPCSR*VISVMLSSCSC Trigger: ACAAGAACAAGAAGACAACATGACCGAGATCACCAACCTGCTGCATGGAGACCTGCTTTCTGAGAACCCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR TCA 90 bp | GAGCTTGAGCAGCACACAGGCCTCAGTGTAGCCTCTCTGGAATGGTTCACTGTGCCTTGTATTAAACTGTaGGAAATAGTCTTCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELEQHTGLSVASLEWFTVPCIKL*EIVFCG Trigger: CCCACAGAAGACTATTTCTCACAGTTTAATACAAGG...CACAGTGAACCATTCCAGAGAGGCTACACTGAGGCCTGTGTGCTGCTCAAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR CCA 90 bp | GAGCAGCACACAGGCCTCAGTGTAGCCTCTCTGGAATGGTTCACTGTGTCCTATTCTGCATTCCTGATATaGTGTTCCGCATGTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: EQHTGLSVASLEWFTVSYSAFLI*CSACHC Trigger: ACAATGACATGCGGAACACCATATCAGGAATGCAGA...ATAGGACACAGTGAACCATTCCAGAGAGGCTACACTGAGGCCTGTGTGCTGCTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | TCTTGCCTCTTTCTTTCTGTCAACTCCACAACCAGGCCCAGTGTCTGTCTCTCAGCAGAAACCATTCTCTaGTCTGTTCCTTTTGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SCLFLSVNSTTRPSVCLSAETIL*SVPFGT Trigger: GGTTCCAAAAGGAACAGAGCAGAGAATGGTTTCTGC...TGAGAGACAGACACTGGGCCTGGTTGTGGAGTTGACAGAAAGAAAGAGGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR GCA 90 bp | TTTATGGTGGGTGAGAAGCTGAGGAAGAAGTGCTTCATGGGGCACACGAACAACTCTCCCATGAACTTCTaGATTCCTGATATGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FMVGEKLRKKCFMGHTNNSPMNF*IPDMVF Trigger: GAACACCATATCAGGAATGCAGAAGTTCATGGGAGA...GTTGTTCGTGTGCCCCATGAAGCACTTCTTCCTCAGCTTCTCACCCACCATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | TTCACTGTGTCCTATGTCCACAGCACCCAAAGCCATGTTAGAGCTCTTCCCAGATCTTGTTGCTTCTCTTaGCTCTTTCTTTCTGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTVSYVHSTQSHVRALPRSCCFS*LFLSVN Trigger: GTTGACAGAAAGAAAGAGGCAAGAGAAGCAACAAGA...TCTGGGAAGAGCTCTAACATGGCTTTGGGTGCTGTGGACATAGGACACAGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR TCA 90 bp | ATGTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGATTCACTTTGAAATTAAATCCTCTCCCATaGACTTCTGCATTCCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: MCTCPYGVFRPRSRFTLKLNPLP*TSAFLI Trigger: TATCAGGAATGCAGAAGTTCATGGGAGAGGATTTAA...TTTCAAAGTGAATCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | CCTCTCTGGAATGGTTCACTGTGTCCTATGTCCACAGCACCCAAAGCCATGTTAATGACTTTGTCATTGTaGTTCATTTCAGCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLWNGSLCPMSTAPKAMLMTLSL*FISAAK Trigger: CTTTGCTGCTGAAATGAAGCACAATGACAAAGTCAT...TAACATGGCTTTGGGTGCTGTGGACATAGGACACAGTGAACCATTCCAGAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR TCA 90 bp | CAGATTCACTTTGAAATAAGCGTGACTCCTAGAGGAACTACTATAAACAAGGAACATGCGCCATGCACATaGCTTTGTCATTGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QIHFEISVTPRGTTINKEHAPCT*LCHCAS Trigger: TGAAGCACAATGACAAAGTCATGTGCATGGCGCATG...TTCCTTGTTTATAGTAGTTCCTCTAGGAGTCACGCTTATTTCAAAGTGAATCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR GCA 90 bp | AAGGAGCAGATTCACTTTGAAATAAGCGTGACTCCTAGAGGAACTACTATAAACGCAGAAACCATTCTCTaGTCTGTTCCTTTTGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: KEQIHFEISVTPRGTTINAETIL*SVPFGT Trigger: GGTTCCAAAAGGAACAGAGCAGAGAATGGTTTCTGC...GTTTATAGTAGTTCCTCTAGGAGTCACGCTTATTTCAAAGTGAATCTGCTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS GCA 90 bp | TCTGCCAGTAGGTGGTCAGCCCGGGCTTTCTCCCGTTCCCCATGCTaGTGCAGAAACCATTCTCTGCTCTGTTCCTTTTGGAACCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SASRWSARAFSRSPC*CRNHSLLCSFWNLL Trigger: GAGGAGGTTCCAAAAGGAACAGAGCAGAGAATGGTTTCTGCAGCAGCATGGGGAACGGGAGAAAGCCCGGGCTGACCACCTACTGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCTGACCGCATGTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGATCAATGTACCGCTTCTaGGCTAGGTTGGCCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EPDRMCTCPYGVFRPRSRSMYRF*ARLASC Trigger: ACAGGAGGCCAACCTAGCCAAGAAGCGGTACATTGA...TCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCACATGCGGTCAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR CAA 90 bp | ACCCAAAGGAGCTGGCCACCGGTCGAGGGTTCTCAGAAAGCAGGTCTCCATGCATCAATGTACCGCTTCTaGGCTAGGTTGGCCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TQRSWPPVEGSQKAGLHASMYRF*ARLASC Trigger: ACAGGAGGCCAACCTAGCCAAGAAGCGGTACATTGA...TGCATGGAGACCTGCTTTCTGAGAACCCTCGACCGGTGGCCAGCTCCTTTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCTCAGTGTAGCCTCTCTGGAATGGTTCACTGTGTCCTATGTCCACAGCACCAGCTTCTCCTGGATTaGCCGCTTCTGCGTGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: RPQCSLSGMVHCVLCPQHQLLLD*PLLREP Trigger: TGGTTCACGCAGAAGCGGCAAATCCAGGAGAAGCTG...GTGCTGTGGACATAGGACACAGTGAACCATTCCAGAGAGGCTACACTGAGGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR CAA 90 bp | GAGCCTGACCGCATGTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGAGTGATCTCGGTCATGTaGTCTTCTTGTTCTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EPDRMCTCPYGVFRPRSRVISVM*SSCSCC Trigger: GCAACAAGAACAAGAAGACAACATGACCGAGATCAC...TCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCACATGCGGTCAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR CAA 90 bp | AGGCCTCAGTGTAGCCTCTCTGGAATGGTTCACTGTGTCCTATGTCCACAGCACTCTCCATGCAGCAGGTaGGTGATCTCGGTCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPQCSLSGMVHCVLCPQHSPCSR*VISVML Trigger: CAACATGACCGAGATCACCAACCTGCTGCATGGAGA...GTGCTGTGGACATAGGACACAGTGAACCATTCCAGAGAGGCTACACTGAGGCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS CCA 90 bp | GTGTTCCGCATGTCATTGTCTGAAATGCGGGCTGGAAGCTCTTTCTaGAGGGCCAGGGGGTCAGAAAGATCAAACTCACGTCGAGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VFRMSLSEMRAGSSF*RARGSERSNSRRVS Trigger: AGAAACTCGACGTGAGTTTGATCTTTCTGACCCCCTGGCCCTCCAGAAAGAGCTTCCAGCCCGCATTTCAGACAATGACATGCGGAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS-3UTR CAA 90 bp | GACCGCATGTGCACATGCCCATACGGGGTGTTCAGACCAAGGAGCAGATTCACTCTTCTGTGGGCTGACTaGAGGAGGCTGTATTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: DRMCTCPYGVFRPRSRFTLLWAD*RRLYSF Trigger: AAATGAATACAGCCTCCTCAAGTCAGCCCACAGAAG...AGTGAATCTGCTCCTTGGTCTGAACACCCCGTATGGGCATGTGCACATGCGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS GCA 90 bp | ACTTCTGCATTCCTGATATGGTGTTCCGCATGTCATTGTCTGAAATaGGGGCTGGAAGCTCTTTCTGGAGGGCCAGGGGGTCAGAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TSAFLIWCSACHCLK*GLEALSGGPGGQKD Trigger: ATCTTTCTGACCCCCTGGCCCTCCAGAAAGAGCTTCCAGCCCGCATTTCAGACAATGACATGCGGAACACCATATCAGGAATGCAGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGAAAGCAGGTCTCCATGCAGCAGGTTGGTGATCTCGGTCATGTTGTCTTCTGCTCTGTTCCTTTaGGAACCTCCTCCTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSESRSPCSRLVISVMLSSALFL*EPPPLL Trigger: CAAGAGAGGAGGAGGTTCCAAAAGGAACAGAGCAGA...AGACAACATGACCGAGATCACCAACCTGCTGCATGGAGACCTGCTTTCTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS GCA 90 bp | TGCCTCTGTTCCCGGTCATGCGCCATGCACATGACTTTGTCATTGTaGTTCATTTCAGCAGCAAAGGCTTCATGCCTAGCTTTGTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CLCSRSCAMHMTLSL*FISAAKASCLALSV Trigger: AACTGACAAAGCTAGGCATGAAGCCTTTGCTGCTGAAATGAAGCACAATGACAAAGTCATGTGCATGGCGCATGACCGGGAACAGAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS GCA 90 bp | AAGTTCTGCTGGAAGTCATTGATAGCTCTACACAGCTGTTTCCTGTaGCTCTGTTCCCGGTCATGCGCCATGCACATGACTTTGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KFCWKSLIALHSCFL*LCSRSCAMHMTLSL Trigger: CAATGACAAAGTCATGTGCATGGCGCATGACCGGGAACAGAGGCACAGGAAACAGCTGTGTAGAGCTATCAATGACTTCCAGCAGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS-3UTR CAA 90 bp | TGGTGCCTCTTTATGGTGGGTGAGAAGCTGAGGAAGAAGTGCTTCATGGGGCACGTCTTCTTGTTCTTGTaGCTTCTCTTGCCTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WCLFMVGEKLRKKCFMGHVFLFL*LLLPLS Trigger: AGAAAGAGGCAAGAGAAGCAACAAGAACAAGAAGAC...GTGCCCCATGAAGCACTTCTTCCTCAGCTTCTCACCCACCATAAAGAGGCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS TCA 90 bp | GCCAGGGGGTCAGAAAGATCAAACTCACGTCGAGTTTCTGGCTTCTaGAAGTTCTGCTGGAAGTCATTGATAGCTCTACACAGCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ARGSERSNSRRVSGF*KFCWKSLIALHSCF Trigger: GAAACAGCTGTGTAGAGCTATCAATGACTTCCAGCAGAACTTTCAGAAGCCAGAAACTCGACGTGAGTTTGATCTTTCTGACCCCCTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS TCA 90 bp | TCTTGTTGCTTCTCTTGCCTCTTTCTTTCTGTCAACTCCACAACCTaGTTCTTGTTGAACGCTTTCACGGCTGCGCAGACTTCCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCCFSCLFLSVNSTT*FLLNAFTAAQTSFL Trigger: CAGGAAGGAAGTCTGCGCAGCCGTGAAAGCGTTCAACAAGAATCAGGTTGTGGAGTTGACAGAAAGAAAGAGGCAAGAGAAGCAACAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR CAA 90 bp | CGAGGGTTCTCAGAAAGCAGGTCTCCATGCAGCAGGTTGGTGATCTCGGTCATGGCTTCATGCCTAGCTTaGTCAGTTATTTCTTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: RGFSESRSPCSRLVISVMASCLA*SVISFI Trigger: GATAAAAGAAATAACTGACAAAGCTAGGCATGAAGC...CATGACCGAGATCACCAACCTGCTGCATGGAGACCTGCTTTCTGAGAACCCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229238.2 |
||
| CDS-3UTR CAA 90 bp | TTTATGGTGGGTGAGAAGCTGAGGAAGAAGTGCTTCATGGGGCACACGAACAACGGTCATGTTGTCTTCTaGTTCTTGTTGCTTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FMVGEKLRKKCFMGHTNNGHVVF*FLLLLL Trigger: CAAGAGAAGCAACAAGAACAAGAAGACAACATGACC...GTTGTTCGTGTGCCCCATGAAGCACTTCTTCCTCAGCTTCTCACCCACCATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS TCA 90 bp | TGCCTAGCTTTGTCAGTTATTTCTTTTATCTTCTGGTCACGGACTTaGAAATCCCAGGCTTGTGTGTCTCCCCCAATGATCCTGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLALSVISFIFWSRT*KSQACVSPPMILFL Trigger: CAGGAACAGGATCATTGGGGGAGACACACAAGCCTGGGATTTTCAAGTCCGTGACCAGAAGATAAAAGAAATAACTGACAAAGCTAGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS TCA 90 bp | CCTTTTGGAACCTCCTCCTCTCTTGGAAGTTTAAATCCTCTCCCATaGACTTCTGCATTCCTGATATGGTGTTCCGCATGTCATTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFGTSSSLGSLNPLP*TSAFLIWCSACHCL Trigger: CAGACAATGACATGCGGAACACCATATCAGGAATGCAGAAGTTCATGGGAGAGGATTTAAACTTCCAAGAGAGGAGGAGGTTCCAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS GCA 90 bp | AACCTCCTCCTCTCTTGGAAGTTTAAATCCTCTCCCATGAACTTCTaGATTCCTGATATGGTGTTCCGCATGTCATTGTCTGAAATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: NLLLSWKFKSSPMNF*IPDMVFRMSLSEMR Trigger: CCGCATTTCAGACAATGACATGCGGAACACCATATCAGGAATGCAGAAGTTCATGGGAGAGGATTTAAACTTCCAAGAGAGGAGGAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAGCAGATTCACTTTGAAATAAGCGTGACTCCTAGAGGAACTACTATAAACTCTGCTCTGTTCCTTTaGGAACCTCCTCCTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KEQIHFEISVTPRGTTINSALFL*EPPPLL Trigger: CAAGAGAGGAGGAGGTTCCAAAAGGAACAGAGCAGA...GTTTATAGTAGTTCCTCTAGGAGTCACGCTTATTTCAAAGTGAATCTGCTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR CAA 90 bp | CACTTTGAAATAAGCGTGACTCCTAGAGGAACTACTATAAACAAGGAAAGCAGTGCCATGCACATGACTTaGTCATTGTGCTTCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HFEISVTPRGTTINKESSAMHMT*SLCFIS Trigger: TGAAATGAAGCACAATGACAAAGTCATGTGCATGGC...ACTGCTTTCCTTGTTTATAGTAGTTCCTCTAGGAGTCACGCTTATTTCAAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR CAA 90 bp | CAGATTCACTTTGAAATAAGCGTGACTCCTAGAGGAACTACTATAAACAAGGAAGTTGTCTTCTTGTTCTaGTTGCTTCTCTTGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QIHFEISVTPRGTTINKEVVFLF*LLLLPL Trigger: AAGAGGCAAGAGAAGCAACAAGAACAAGAAGACAAC...TTCCTTGTTTATAGTAGTTCCTCTAGGAGTCACGCTTATTTCAAAGTGAATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS-3UTR CAA 90 bp | CACTTTGAAATAAGCGTGACTCCTAGAGGAACTACTATAAACAAGGAAAGCAGTGCTTCATGCCTAGCTTaGTCAGTTATTTCTTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: HFEISVTPRGTTINKESSASCLA*SVISFI Trigger: GATAAAAGAAATAACTGACAAAGCTAGGCATGAAGC...ACTGCTTTCCTTGTTTATAGTAGTTCCTCTAGGAGTCACGCTTATTTCAAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS CAA 90 bp | GCGTCGAAGATCCGTCCCTGCCTGCACAGGTCAATGTACCGCTTCTaGGCTAGGTTGGCCTCCTGTTGTAGGTCCTTAGACATCGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: ASKIRPCLHRSMYRF*ARLASCCRSLDIAT Trigger: GGTAGCGATGTCTAAGGACCTACAACAGGAGGCCAACCTAGCCAAGAAGCGGTACATTGACCTGTGCAGGCAGGGACGGATCTTCGACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS GCA 72 bp | AGGTGGTCAGCCCGGGCTTTCTCCCGTTCCCCATGCTaGTGCAGAAACCATTCTCTGCTCTGTTCCTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RWSARAFSRSPC*CRNHSLLCSFW Trigger: CCAAAAGGAACAGAGCAGAGAATGGTTTCTGCAGCAGCATGGGGAACGGGAGAAAGCCCGGGCTGACCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS CAA 72 bp | ATCCGTCCCTGCCTGCACAGGTCAATGTACCGCTTCTaGGCTAGGTTGGCCTCCTGTTGTAGGTCCTTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: IRPCLHRSMYRF*ARLASCCRSLD Trigger: GTCTAAGGACCTACAACAGGAGGCCAACCTAGCCAAGAAGCGGTACATTGACCTGTGCAGGCAGGGACGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS CAA 72 bp | TGCCTGCACAGGTCAATGTACCGCTTCTTGGCTAGGTaGGCCTCCTGTTGTAGGTCCTTAGACATCGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: CLHRSMYRFLAR*ASCCRSLDIAT Trigger: GGTAGCGATGTCTAAGGACCTACAACAGGAGGCCAACCTAGCCAAGAAGCGGTACATTGACCTGTGCAGGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS CAA 90 bp | TCTCCCATGAACTTCTGCATTCCTGATATGGTGTTCCGCATGTCATaGTCTGAAATGCGGGCTGGAAGCTCTTTCTGGAGGGCCAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPMNFCIPDMVFRMS*SEMRAGSSFWRARG Trigger: CCCCCTGGCCCTCCAGAAAGAGCTTCCAGCCCGCATTTCAGACAATGACATGCGGAACACCATATCAGGAATGCAGAAGTTCATGGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS GCA 72 bp | TCTCCCGTTCCCCATGCTGCTGCAGAAACCATTCTCTaGTCTGTTCCTTTTGGAACCTCCTCCTCTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPVPHAAAETIL*SVPFGTSSSLG Trigger: TCCAAGAGAGGAGGAGGTTCCAAAAGGAACAGAGCAGAGAATGGTTTCTGCAGCAGCATGGGGAACGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS TCA 72 bp | AACTCTCTGGCTGTTTCATCAAACTTGAGTCTCGTCTaGGTGTGGAGGTGTTCTGCCAGTAGGTGGTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NSLAVSSNLSLV*VWRCSASRWSA Trigger: GGCTGACCACCTACTGGCAGAACACCTCCACACTCAGACGAGACTCAAGTTTGATGAAACAGCCAGAGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS CCA 72 bp | ATGTCATTGTCTGAAATGCGGGCTGGAAGCTCTTTCTaGAGGGCCAGGGGGTCAGAAAGATCAAACTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: MSLSEMRAGSSF*RARGSERSNSR Trigger: ACGTGAGTTTGATCTTTCTGACCCCCTGGCCCTCCAGAAAGAGCTTCCAGCCCGCATTTCAGACAATGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS CAA 90 bp | CTGTGCCTCTGTTCCCGGTCATGCGCCATGCACATGACTTTGTCATaGTGCTTCATTTCAGCAGCAAAGGCTTCATGCCTAGCTTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LCLCSRSCAMHMTLS*CFISAAKASCLALS Trigger: TGACAAAGCTAGGCATGAAGCCTTTGCTGCTGAAATGAAGCACAATGACAAAGTCATGTGCATGGCGCATGACCGGGAACAGAGGCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS CAA 90 bp | TGTTTCCTGTGCCTCTGTTCCCGGTCATGCGCCATGCACATGACTTaGTCATTGTGCTTCATTTCAGCAGCAAAGGCTTCATGCCTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CFLCLCSRSCAMHMT*SLCFISAAKASCLA Trigger: AGCTAGGCATGAAGCCTTTGCTGCTGAAATGAAGCACAATGACAAAGTCATGTGCATGGCGCATGACCGGGAACAGAGGCACAGGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS GCA 72 bp | TCCCGGTCATGCGCCATGCACATGACTTTGTCATTGTaGTTCATTTCAGCAGCAAAGGCTTCATGCCTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRSCAMHMTLSL*FISAAKASCLA Trigger: AGCTAGGCATGAAGCCTTTGCTGCTGAAATGAAGCACAATGACAAAGTCATGTGCATGGCGCATGACCGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS GCA 72 bp | CTACACAGCTGTTTCCTGTGCCTCTGTTCCCGGTCATaGGCCATGCACATGACTTTGTCATTGTGCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LHSCFLCLCSRS*AMHMTLSLCFI Trigger: AATGAAGCACAATGACAAAGTCATGTGCATGGCGCATGACCGGGAACAGAGGCACAGGAAACAGCTGTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS CAA 72 bp | TGTTCCCGGTCATGCGCCATGCACATGACTTTGTCATaGTGCTTCATTTCAGCAGCAAAGGCTTCATGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: CSRSCAMHMTLS*CFISAAKASCL Trigger: TAGGCATGAAGCCTTTGCTGCTGAAATGAAGCACAATGACAAAGTCATGTGCATGGCGCATGACCGGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS CAA 72 bp | AACTTCTGCATTCCTGATATGGTGTTCCGCATGTCATaGTCTGAAATGCGGGCTGGAAGCTCTTTCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NFCIPDMVFRMS*SEMRAGSSFWR Trigger: CCTCCAGAAAGAGCTTCCAGCCCGCATTTCAGACAATGACATGCGGAACACCATATCAGGAATGCAGAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS TCA 72 bp | TTCTCTTGCCTCTTTCTTTCTGTCAACTCCACAACCTaGTTCTTGTTGAACGCTTTCACGGCTGCGCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: FSCLFLSVNSTT*FLLNAFTAAQT Trigger: AGTCTGCGCAGCCGTGAAAGCGTTCAACAAGAATCAGGTTGTGGAGTTGACAGAAAGAAAGAGGCAAGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS TCA 72 bp | ACCTCCTCCTCTCTTGGAAGTTTAAATCCTCTCCCATaGACTTCTGCATTCCTGATATGGTGTTCCGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: TSSSLGSLNPLP*TSAFLIWCSAC Trigger: ACATGCGGAACACCATATCAGGAATGCAGAAGTTCATGGGAGAGGATTTAAACTTCCAAGAGAGGAGGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS CAA 90 bp | ATGCAGCAGGTTGGTGATCTCGGTCATGTTGTCTTCTTGTTCTTGTaGCTTCTCTTGCCTCTTTCTTTCTGTCAACTCCACAACCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: MQQVGDLGHVVFLFL*LLLPLSFCQLHNLI Trigger: AATCAGGTTGTGGAGTTGACAGAAAGAAAGAGGCAAGAGAAGCAACAAGAACAAGAAGACAACATGACCGAGATCACCAACCTGCTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023067.4 |
||
| CDS TCA 72 bp | TTGTCAGTTATTTCTTTTATCTTCTGGTCACGGACTTaGAAATCCCAGGCTTGTGTGTCTCCCCCAATGATC | + |
|
Preference number: 6 (lower is better) Translates to: LSVISFIFWSRT*KSQACVSPPMI Trigger: GATCATTGGGGGAGACACACAAGCCTGGGATTTTCAAGTCCGTGACCAGAAGATAAAAGAAATAACTGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||
| CDS CAA 72 bp | TGCTTCATTTCAGCAGCAAAGGCTTCATGCCTAGCTTaGTCAGTTATTTCTTTTATCTTCTGGTCACGGACT | + |
|
Preference number: 6 (lower is better) Translates to: CFISAAKASCLA*SVISFIFWSRT Trigger: AGTCCGTGACCAGAAGATAAAAGAAATAACTGACAAAGCTAGGCATGAAGCCTTTGCTGCTGAAATGAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023067.4 ENSMUST00000229238.2 |
||