Pregenerated sensors for RIBC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025257Ensembl transcript IDs: ENSMUST00000026288.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GTAGACAGTGGAGGTTTGGCTTTAGTTCCCTCCTACTaGGTAGAAATTAGAAATGAGGATTTGTTGCATTTT | + |
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Preference number: 3 (lower is better) Translates to: VDSGGLALVPSY*VEIRNEDLLHF Trigger: AAAATGCAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR GCA 90 bp | CCTAGAGTAGACAGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTGCCTCCTGTTGCCGCTaGTGTTCACGGCGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PRVDSGGLALVPSYWVEIASCCR*CSRRCC Trigger: GCAGCAGCGCCGTGAACAGCAGCGGCAACAGGAGGC...AATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTACTCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR GCA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATCGCTGCTGCAGGGCTTaGTTGGCTGCCTGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SGGLALVPSYWVEIRNEDRCCRA*LAAWAL Trigger: CAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCG...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR GCA 90 bp | CCTAGAGTAGACAGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTCTGATGGCAGCTCTCTaGTCTGCACTCATCCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PRVDSGGLALVPSYWVEILMAAL*SALIPF Trigger: GAAGGGGATGAGTGCAGAGCAGAGAGCTGCCATCAG...AATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTACTCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR GCA 90 bp | CCTAGAGTAGACAGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTGCCAGCCGTTTGTTTTaGCTTCCCCACTCAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PRVDSGGLALVPSYWVEIASRLF*LPHSAS Trigger: GGAAGCTGAGTGGGGAAGGCAAAACAAACGGCTGGC...AATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTACTCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CCA 90 bp | CCTAGAGTAGACAGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTCCCGGTGAGGAGCATTaGCTCTTTGGGCAACTTGAG | + |
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Preference number: 4 (lower is better) Translates to: PRVDSGGLALVPSYWVEIPGEEH*LFGQLE Trigger: CTCAAGTTGCCCAAAGAGCCAATGCTCCTCACCGGG...AATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTACTCTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR TCA 90 bp | CCTAGAGTAGACAGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGCGGCTGCTGGTGTTaGACTGTAGGTAATAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: PRVDSGGLALVPSYWVEISGCWC*TVGNSA Trigger: CGCACTATTACCTACAGTTCAACACCAGCAGCCGCT...AATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTACTCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CCA 90 bp | GGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGGCTGCAGGGCTTGCTTaGCTGCCTGGGCTTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GLALVPSYWVEIRNEDLLAAGLA*LPGLCW Trigger: CCAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGC...CAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR GCA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATCAGGGCTTGCTTGGCTaGCTGGGCTTTGTTGGCATT | + |
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Preference number: 4 (lower is better) Translates to: SGGLALVPSYWVEIRNEDQGLLG*LGFVGI Trigger: AATGCCAACAAAGCCCAGGCAGCCAAGCAAGCCCTG...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CCA 90 bp | CCTAGAGTAGACAGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTGTACTGCATGCTGGCTaGGCCAAAGTATGCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: PRVDSGGLALVPSYWVEIVLHAG*AKVCIL Trigger: AAGGATGCATACTTTGGCCCAGCCAGCATGCAGTAC...AATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTACTCTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CCA 90 bp | GGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGGGGCCTCCTCTTCTCTaGCTGCCTGTTGCTCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: GLALVPSYWVEIRNEDLLGPPLL*LPVAPV Trigger: TACAGGAGCAACAGGCAGCCAGAGAAGAGGAGGCCC...CAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR TCA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATGCTCTTTGGGCAACTTaGGGATTCTCAGTCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SGGLALVPSYWVEIRNEDALWAT*GFSVSR Trigger: CCTGCTGACTGAGAATCCTCAAGTTGCCCAAAGAGC...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CCA 90 bp | CCTAGAGTAGACAGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAGTACTGCATGCTaGCTGGGCCAAAGTATGCAT | + |
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Preference number: 4 (lower is better) Translates to: PRVDSGGLALVPSYWVEIRSTAC*LGQSMH Trigger: ATGCATACTTTGGCCCAGCCAGCATGCAGTACTTCT...AATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTACTCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR TCA 90 bp | GGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGCTCGGTTCCGCACATTaGAGAATCGGCTTTGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: GLALVPSYWVEIRNEDLLLGSAH*RIGFGV Trigger: AACGCCAAAGCCGATTCTTCAATGTGCGGAACCGAG...CAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR GCA 90 bp | GGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGCTCATCTGTTCCTGCTaGATTCTCACGTGTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: GLALVPSYWVEIRNEDLLLICSC*ILTCEA Trigger: GGCCTCACACGTGAGAATGCAGCAGGAACAGATGAG...CAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR GCA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTCTCTGGCTGCCTGTTaGTCCTGTAGCTGTTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SGGLALVPSYWVEIRNEDSLAAC*SCSCFS Trigger: GGAAAAACAGCTACAGGAGCAACAGGCAGCCAGAGA...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGCATGGCAGCTCTCTGCTCTaGACTCATCCCCTTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: LALVPSYWVEIRNEDLLHGSSLL*THPLPT Trigger: TGTTGGAAGGGGATGAGTGCAGAGCAGAGAGCTGCC...ATGCAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR GCA 90 bp | CCTAGAGTAGACAGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTTTCTTGTATTGCTGCTaGCTTTGTTCCCGAAAATCC | + |
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Preference number: 4 (lower is better) Translates to: PRVDSGGLALVPSYWVEIFLYCC*LCSRKS Trigger: GGATTTTCGGGAACAAAGGCAGCAGCAATACAAGAA...AATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTACTCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CCA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATCGAAACTCCTGGAATTaGTCTGGATCCCAGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: SGGLALVPSYWVEIRNEDRNSWN*SGSQKS Trigger: TGACTTCTGGGATCCAGACCAATTCCAGGAGTTTCG...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| 3UTR CAA 72 bp | CGAACGACTTTATTACCTAGAGTAGACAGTGGAGGTTaGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGA | + |
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Preference number: 4 (lower is better) Translates to: RTTLLPRVDSGG*ALVPSYWVEIR Trigger: TCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTACTCTAGGTAATAAAGTCGTTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR TCA 90 bp | TTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGCATTTTCTTGAGTTTTTCTaGTGGCAGCTCTCTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LALVPSYWVEIRNEDLLHFLEFF*WQLSAL Trigger: CAGAGCAGAGAGCTGCCATCAGAAAAACTCAAGAAA...ATGCAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR TCA 90 bp | GGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGTGTCGTTGTGTTTCTTaGGTTTTTCTGATGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GLALVPSYWVEIRNEDLLCRCVS*VFLMAA Trigger: AGCTGCCATCAGAAAAACTCAAGAAACACAACGACA...CAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR GCA 90 bp | TTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGCATTGTCCATTCTTGTATTaGTGCTGCCTTTGTTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: LALVPSYWVEIRNEDLLHCPFLY*CCLCSR Trigger: TCGGGAACAAAGGCAGCAGCAATACAAGAATGGACA...ATGCAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CCA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGAAGAATCGGCTTTaGCGTTCCTTTTCACGATTT | + |
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Preference number: 4 (lower is better) Translates to: SGGLALVPSYWVEIRNEDLKNRL*RSFSRF Trigger: AAATCGTGAAAAGGAACGCCAAAGCCGATTCTTCAA...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS GCA 90 bp | ACCTCTGTGAGGTTGGCCTCCTGTTGCCGCTGCTGTTCACGGCGCTaGTGCAGGGCTTGCTTGGCTGCCTGGGCTTTGTTGGCATTGGCC | + |
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Preference number: 5 (lower is better) Translates to: TSVRLASCCRCCSRR*CRACLAAWALLALA Trigger: GGCCAATGCCAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCGCCGTGAACAGCAGCGGCAACAGGAGGCCAACCTCACAGAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS TCA 90 bp | CCAGTTCAGCAGCCCGCGTGTCAGCAGCTAGGCGCAGTTGGTCACTaGGCAAAGCTGCTCGGGCCTCCTCTTCTCTGGCTGCCTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: PVQQPACQQLGAVGH*AKLLGPPLLWLPVA Trigger: AGCAACAGGCAGCCAGAGAAGAGGAGGCCCGAGCAGCTTTGCTCAGTGACCAACTGCGCCTAGCTGCTGACACGCGGGCTGCTGAACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS GCA 90 bp | CTGTTGCCGCTGCTGTTCACGGCGCTGCTGCAGGGCTTGCTTGGCTaGCTGGGCTTTGTTGGCATTGGCCATAGCAGTCCTCATAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LLPLLFTALLQGLLG*LGFVGIGHSSPHSC Trigger: GCAGCTATGAGGACTGCTATGGCCAATGCCAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCGCCGTGAACAGCAGCGGCAACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS GCA 90 bp | TCTGTGAGGTTGGCCTCCTGTTGCCGCTGCTGTTCACGGCGCTGCTaGAGGGCTTGCTTGGCTGCCTGGGCTTTGTTGGCATTGGCCATA | + |
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Preference number: 5 (lower is better) Translates to: SVRLASCCRCCSRRC*RACLAAWALLALAI Trigger: TATGGCCAATGCCAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCGCCGTGAACAGCAGCGGCAACAGGAGGCCAACCTCACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CCA 90 bp | TGCCGCTGCTGTTCACGGCGCTGCTGCAGGGCTTGCTTGGCTGCCTaGGCTTTGTTGGCATTGGCCATAGCAGTCCTCATAGCTGCTCGA | + |
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Preference number: 5 (lower is better) Translates to: CRCCSRRCCRACLAA*ALLALAIAVLIAAR Trigger: TCGAGCAGCTATGAGGACTGCTATGGCCAATGCCAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCGCCGTGAACAGCAGCGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | CCTAGAGTAGACAGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTGCGCTGCTGCAGGGCTaGCTTGGCTGCCTGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: PRVDSGGLALVPSYWVEIALLQG*LGCLGF Trigger: AAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCGC...AATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTACTCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS GCA 90 bp | TCACGTGTGAGGCCCTTTCCAGGTCCTCTCCAAAGAAGTACTGCATaGTGGCTGGGCCAAAGTATGCATCCTTCTCATAATAAGGGACCC | + |
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Preference number: 5 (lower is better) Translates to: SRVRPFPGPLQRSTA*WLGQSMHPSHNKGP Trigger: GGGTCCCTTATTATGAGAAGGATGCATACTTTGGCCCAGCCAGCATGCAGTACTTCTTTGGAGAGGACCTGGAAAGGGCCTCACACGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CCA 90 bp | CGTGTGAGGCCCTTTCCAGGTCCTCTCCAAAGAAGTACTGCATGCTaGCTGGGCCAAAGTATGCATCCTTCTCATAATAAGGGACCCGAA | + |
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Preference number: 5 (lower is better) Translates to: RVRPFPGPLQRSTAC*LGQSMHPSHNKGPE Trigger: TTCGGGTCCCTTATTATGAGAAGGATGCATACTTTGGCCCAGCCAGCATGCAGTACTTCTTTGGAGAGGACCTGGAAAGGGCCTCACACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATGAGGTTGGCCTCCTGTaGCCGCTGCTGTTCACGGCG | + |
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Preference number: 5 (lower is better) Translates to: SGGLALVPSYWVEIRNEDEVGLL*PLLFTA Trigger: CGCCGTGAACAGCAGCGGCAACAGGAGGCCAACCTC...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CCA 90 bp | ACATCCACCCCCATGACTCGGTTCCGCACATTGAAGAATCGGCTTTaGCGTTCCTTTTCACGATTTCTTCTAGCTTCAATGGCTGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TSTPMTRFRTLKNRL*RSFSRFLLASMAAS Trigger: GCTGGCAGCCATTGAAGCTAGAAGAAATCGTGAAAAGGAACGCCAAAGCCGATTCTTCAATGTGCGGAACCGAGTCATGGGGGTGGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS TCA 90 bp | TTTTTCCAGGTTGTATCTCATCTGTTCCTGCTGCATTCTCACGTGTaGGGCCCTTTCCAGGTCCTCTCCAAAGAAGTACTGCATGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: FFQVVSHLFLLHSHV*GPFQVLSKEVLHAG Trigger: GCCAGCATGCAGTACTTCTTTGGAGAGGACCTGGAAAGGGCCTCACACGTGAGAATGCAGCAGGAACAGATGAGATACAACCTGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS GCA 90 bp | CAGGTCCTCTCCAAAGAAGTACTGCATGCTGGCTGGGCCAAAGTATaGATCCTTCTCATAATAAGGGACCCGAAACTCCTGGAATTGGTC | + |
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Preference number: 5 (lower is better) Translates to: QVLSKEVLHAGWAKV*ILLIIRDPKLLELV Trigger: GACCAATTCCAGGAGTTTCGGGTCCCTTATTATGAGAAGGATGCATACTTTGGCCCAGCCAGCATGCAGTACTTCTTTGGAGAGGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTGCTGCAGGGCTTGCTaGGCTGCCTGGGCTTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: SGGLALVPSYWVEIRNEDCCRAC*AAWALL Trigger: CAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCA...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | CCTAGAGTAGACAGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTTTAGCTAGCTCCCTGTaGAAGGAGCCCAGTCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: PRVDSGGLALVPSYWVEILASSL*KEPSPL Trigger: AAGGGGACTGGGCTCCTTCAACAGGGAGCTAGCTAA...AATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTACTCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CCA 90 bp | TCTTGTATTGCTGCTGCCTTTGTTCCCGAAAATCCTGTACTCTCTTaGACAGCCGGTATGCTCGTTCTGCCTCTTCTTTCTCTAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: SCIAAAFVPENPVLS*TAGMLVLPLLSLAS Trigger: AGATGCTAGAGAAAGAAGAGGCAGAACGAGCATACCGGCTGTCCAAGAGAGTACAGGATTTTCGGGAACAAAGGCAGCAGCAATACAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGCATTTGACCTCTGTGAGGTaGGCCTCCTGTTGCCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LALVPSYWVEIRNEDLLHLTSVR*ASCCRC Trigger: GCAGCGGCAACAGGAGGCCAACCTCACAGAGGTCAA...ATGCAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATACTCGGTTCCGCACATaGAAGAATCGGCTTTGGCGT | + |
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Preference number: 5 (lower is better) Translates to: SGGLALVPSYWVEIRNEDTRFRT*KNRLWR Trigger: ACGCCAAAGCCGATTCTTCAATGTGCGGAACCGAGT...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATCCGAAACTCCTGGAATaGGTCTGGATCCCAGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: SGGLALVPSYWVEIRNEDPKLLE*VWIPEV Trigger: GACTTCTGGGATCCAGACCAATTCCAGGAGTTTCGG...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | GGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGAGCCAGCCGTTTGTTTaGCCTTCCCCACTCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: GLALVPSYWVEIRNEDLLSQPFV*PSPLSF Trigger: GAAGCTGAGTGGGGAAGGCAAAACAAACGGCTGGCT...CAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTGGGCTTTGTTGGCATaGGCCATAGCAGTCCTCATA | + |
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Preference number: 5 (lower is better) Translates to: SGGLALVPSYWVEIRNEDWALLA*AIAVLI Trigger: TATGAGGACTGCTATGGCCAATGCCAACAAAGCCCA...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS GCA 90 bp | AATTGGTCTGGATCCCAGAAGTCAAATTCATGTCCATTCTTGTATTaGTGCTGCCTTTGTTCCCGAAAATCCTGTACTCTCTTGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: NWSGSQKSNSCPFLY*CCLCSRKSCTLLDS Trigger: GCTGTCCAAGAGAGTACAGGATTTTCGGGAACAAAGGCAGCAGCAATACAAGAATGGACATGAATTTGACTTCTGGGATCCAGACCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATGTATTGCTGCTGCCTTaGTTCCCGAAAATCCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: SGGLALVPSYWVEIRNEDVLLLP*FPKILY Trigger: GTACAGGATTTTCGGGAACAAAGGCAGCAGCAATAC...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGCATCTGGTGACTTGTTTCTaGACCTCTGTGAGGTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: LALVPSYWVEIRNEDLLHLVTCF*TSVRLA Trigger: GGCCAACCTCACAGAGGTCAAGAAACAAGTCACCAG...ATGCAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | GGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGATGTCCATTCTTGTATaGCTGCTGCCTTTGTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: GLALVPSYWVEIRNEDLLMSILV*LLPLFP Trigger: CGGGAACAAAGGCAGCAGCAATACAAGAATGGACAT...CAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGCATCAGGTCACTGGTGACTaGTTTCTTGACCTCTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: LALVPSYWVEIRNEDLLHQVTGD*FLDLCE Trigger: CTCACAGAGGTCAAGAAACAAGTCACCAGTGACCTG...ATGCAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATATTGAAGAATCGGCTTaGGCGTTCCTTTTCACGATT | + |
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Preference number: 5 (lower is better) Translates to: SGGLALVPSYWVEIRNEDIEESA*AFLFTI Trigger: AATCGTGAAAAGGAACGCCAAAGCCGATTCTTCAAT...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | GGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGAGCTGTTTTTCCAGGTaGTATCTCATCTGTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GLALVPSYWVEIRNEDLLSCFSR*YLICSC Trigger: GCAGGAACAGATGAGATACAACCTGGAAAAACAGCT...CAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | AGTGGAGGTTTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATCGAATTCAGATAATTTaGCTGAGCTTGCTGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: SGGLALVPSYWVEIRNEDRIQII*LSLLLL Trigger: AAGGAGCAGCAAGCTCAGCAAAATTATCTGAATTCG...ATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAAACCTCCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGCATTTGTCGTTGTGTTTCTaGAGTTTTTCTGATGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LALVPSYWVEIRNEDLLHLSLCF*SFSDGS Trigger: GCTGCCATCAGAAAAACTCAAGAAACACAACGACAA...ATGCAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS-3UTR CAA 90 bp | TTGGCTTTAGTTCCCTCCTACTGGGTAGAAATTAGAAATGAGGATTTGTTGCATAATTCATGTCCATTCTaGTATTGCTGCTGCCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LALVPSYWVEIRNEDLLHNSCPF*YCCCLC Trigger: ACAAAGGCAGCAGCAATACAAGAATGGACATGAATT...ATGCAACAAATCCTCATTTCTAATTTCTACCCAGTAGGAGGGAACTAAAGCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS GCA 72 bp | TTGGCCTCCTGTTGCCGCTGCTGTTCACGGCGCTGCTaGAGGGCTTGCTTGGCTGCCTGGGCTTTGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LASCCRCCSRRC*RACLAAWALLA Trigger: TGCCAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCGCCGTGAACAGCAGCGGCAACAGGAGGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 90 bp | CGGCGCTGCTGCAGGGCTTGCTTGGCTGCCTGGGCTTTGTTGGCATaGGCCATAGCAGTCCTCATAGCTGCTCGACAGGATTCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RRCCRACLAAWALLA*AIAVLIAARQDSSS Trigger: GCTGGAGGAATCCTGTCGAGCAGCTATGAGGACTGCTATGGCCAATGCCAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS GCA 72 bp | CTGCTGTTCACGGCGCTGCTGCAGGGCTTGCTTGGCTaGCTGGGCTTTGTTGGCATTGGCCATAGCAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLFTALLQGLLG*LGFVGIGHSSP Trigger: AGGACTGCTATGGCCAATGCCAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCGCCGTGAACAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS GCA 72 bp | TTCTTGACCTCTGTGAGGTTGGCCTCCTGTTGCCGCTaGTGTTCACGGCGCTGCTGCAGGGCTTGCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: FLTSVRLASCCR*CSRRCCRACLA Trigger: AGCCAAGCAAGCCCTGCAGCAGCGCCGTGAACAGCAGCGGCAACAGGAGGCCAACCTCACAGAGGTCAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 72 bp | CGGCGCTGCTGCAGGGCTTGCTTGGCTGCCTGGGCTTaGTTGGCATTGGCCATAGCAGTCCTCATAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RRCCRACLAAWA*LALAIAVLIAA Trigger: AGCAGCTATGAGGACTGCTATGGCCAATGCCAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 72 bp | CGCTGCTGCAGGGCTTGCTTGGCTGCCTGGGCTTTGTaGGCATTGGCCATAGCAGTCCTCATAGCTGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: RCCRACLAAWAL*ALAIAVLIAAR Trigger: TCGAGCAGCTATGAGGACTGCTATGGCCAATGCCAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 72 bp | GACTTGTTTCTTGACCTCTGTGAGGTTGGCCTCCTGTaGCCGCTGCTGTTCACGGCGCTGCTGCAGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: DLFLDLCEVGLL*PLLFTALLQGL Trigger: CAAGCCCTGCAGCAGCGCCGTGAACAGCAGCGGCAACAGGAGGCCAACCTCACAGAGGTCAAGAAACAAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 90 bp | TGCTGTTCACGGCGCTGCTGCAGGGCTTGCTTGGCTGCCTGGGCTTaGTTGGCATTGGCCATAGCAGTCCTCATAGCTGCTCGACAGGAT | + |
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Preference number: 6 (lower is better) Translates to: CCSRRCCRACLAAWA*LALAIAVLIAARQD Trigger: ATCCTGTCGAGCAGCTATGAGGACTGCTATGGCCAATGCCAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCGCCGTGAACAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 90 bp | TCAGTCAGCAGGTCACTGGTGACTTGTTTCTTGACCTCTGTGAGGTaGGCCTCCTGTTGCCGCTGCTGTTCACGGCGCTGCTGCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SVSRSLVTCFLTSVR*ASCCRCCSRRCCRA Trigger: AGCCCTGCAGCAGCGCCGTGAACAGCAGCGGCAACAGGAGGCCAACCTCACAGAGGTCAAGAAACAAGTCACCAGTGACCTGCTGACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS GCA 72 bp | CTCCCTGTTGAAGGAGCCCAGTCCCCTTCGGAACTCTaGACACAGTTCCCGCTCCTGTTCTTCCAGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LPVEGAQSPSEL*TQFPLLFFQFQ Trigger: CTGGAACTGGAAGAACAGGAGCGGGAACTGTGTGCAGAGTTCCGAAGGGGACTGGGCTCCTTCAACAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CCA 72 bp | TGTTCACGGCGCTGCTGCAGGGCTTGCTTGGCTGCCTaGGCTTTGTTGGCATTGGCCATAGCAGTCCTCATA | + |
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Preference number: 6 (lower is better) Translates to: CSRRCCRACLAA*ALLALAIAVLI Trigger: TATGAGGACTGCTATGGCCAATGCCAACAAAGCCCAGGCAGCCAAGCAAGCCCTGCAGCAGCGCCGTGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 72 bp | AGGTCACTGGTGACTTGTTTCTTGACCTCTGTGAGGTaGGCCTCCTGTTGCCGCTGCTGTTCACGGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RSLVTCFLTSVR*ASCCRCCSRRC Trigger: GCAGCGCCGTGAACAGCAGCGGCAACAGGAGGCCAACCTCACAGAGGTCAAGAAACAAGTCACCAGTGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 90 bp | CCCCTTCCAACAATAGGGCAGGACCCGGTGAGGAGCATTGGCTCTTaGGGCAACTTGAGGATTCTCAGTCAGCAGGTCACTGGTGACTTG | + |
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Preference number: 6 (lower is better) Translates to: PLPTIGQDPVRSIGS*GNLRILSQQVTGDL Trigger: CAAGTCACCAGTGACCTGCTGACTGAGAATCCTCAAGTTGCCCAAAGAGCCAATGCTCCTCACCGGGTCCTGCCCTATTGTTGGAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS GCA 72 bp | GGCTTTGTTGGCATTGGCCATAGCAGTCCTCATAGCTaGTCGACAGGATTCCTCCAGCCTAGCCAGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: GFVGIGHSSPHS*STGFLQPSQFS Trigger: GCTGAACTGGCTAGGCTGGAGGAATCCTGTCGAGCAGCTATGAGGACTGCTATGGCCAATGCCAACAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 72 bp | TGTTCTTCCAGTTCCAGGGCCGCTTCAGCCAGCCGTTaGTTTTGCCTTCCCCACTCAGCTTCCACTAACTTT | + |
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Preference number: 6 (lower is better) Translates to: CSSSSRAASASR*FCLPHSASTNF Trigger: AAAGTTAGTGGAAGCTGAGTGGGGAAGGCAAAACAAACGGCTGGCTGAAGCGGCCCTGGAACTGGAAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 90 bp | ACAATAGGGCAGGACCCGGTGAGGAGCATTGGCTCTTTGGGCAACTaGAGGATTCTCAGTCAGCAGGTCACTGGTGACTTGTTTCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: TIGQDPVRSIGSLGN*RILSQQVTGDLFLD Trigger: GTCAAGAAACAAGTCACCAGTGACCTGCTGACTGAGAATCCTCAAGTTGCCCAAAGAGCCAATGCTCCTCACCGGGTCCTGCCCTATTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 90 bp | CACATCCACCCCCATGACTCGGTTCCGCACATTGAAGAATCGGCTTaGGCGTTCCTTTTCACGATTTCTTCTAGCTTCAATGGCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: HIHPHDSVPHIEESA*AFLFTISSSFNGCQ Trigger: CTGGCAGCCATTGAAGCTAGAAGAAATCGTGAAAAGGAACGCCAAAGCCGATTCTTCAATGTGCGGAACCGAGTCATGGGGGTGGATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CCA 72 bp | GCTGCTGCCTTTGTTCCCGAAAATCCTGTACTCTCTTaGACAGCCGGTATGCTCGTTCTGCCTCTTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: AAAFVPENPVLS*TAGMLVLPLLS Trigger: AGAAAGAAGAGGCAGAACGAGCATACCGGCTGTCCAAGAGAGTACAGGATTTTCGGGAACAAAGGCAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 72 bp | GCTTCCACATCCACCCCCATGACTCGGTTCCGCACATaGAAGAATCGGCTTTGGCGTTCCTTTTCACGATTT | + |
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Preference number: 6 (lower is better) Translates to: ASTSTPMTRFRT*KNRLWRSFSRF Trigger: AAATCGTGAAAAGGAACGCCAAAGCCGATTCTTCAATGTGCGGAACCGAGTCATGGGGGTGGATGTGGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 72 bp | TGCTGCTGCCTTTGTTCCCGAAAATCCTGTACTCTCTaGGACAGCCGGTATGCTCGTTCTGCCTCTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: CCCLCSRKSCTL*DSRYARSASSF Trigger: GAAAGAAGAGGCAGAACGAGCATACCGGCTGTCCAAGAGAGTACAGGATTTTCGGGAACAAAGGCAGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS TCA 72 bp | GTTGTATCTCATCTGTTCCTGCTGCATTCTCACGTGTaGGGCCCTTTCCAGGTCCTCTCCAAAGAAGTACTG | + |
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Preference number: 6 (lower is better) Translates to: VVSHLFLLHSHV*GPFQVLSKEVL Trigger: CAGTACTTCTTTGGAGAGGACCTGGAAAGGGCCTCACACGTGAGAATGCAGCAGGAACAGATGAGATACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 72 bp | CTGGCTGCCTGTTGCTCCTGTAGCTGTTTTTCCAGGTaGTATCTCATCTGTTCCTGCTGCATTCTCACGTGT | + |
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Preference number: 6 (lower is better) Translates to: LAACCSCSCFSR*YLICSCCILTC Trigger: ACACGTGAGAATGCAGCAGGAACAGATGAGATACAACCTGGAAAAACAGCTACAGGAGCAACAGGCAGCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 72 bp | AACTTGAGGATTCTCAGTCAGCAGGTCACTGGTGACTaGTTTCTTGACCTCTGTGAGGTTGGCCTCCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: NLRILSQQVTGD*FLDLCEVGLLL Trigger: CAACAGGAGGCCAACCTCACAGAGGTCAAGAAACAAGTCACCAGTGACCTGCTGACTGAGAATCCTCAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CCA 72 bp | TTCCAGGTCCTCTCCAAAGAAGTACTGCATGCTGGCTaGGCCAAAGTATGCATCCTTCTCATAATAAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: FQVLSKEVLHAG*AKVCILLIIRD Trigger: GTCCCTTATTATGAGAAGGATGCATACTTTGGCCCAGCCAGCATGCAGTACTTCTTTGGAGAGGACCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CCA 72 bp | CCCTTTCCAGGTCCTCTCCAAAGAAGTACTGCATGCTaGCTGGGCCAAAGTATGCATCCTTCTCATAATAAG | + |
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Preference number: 6 (lower is better) Translates to: PFPGPLQRSTAC*LGQSMHPSHNK Trigger: CTTATTATGAGAAGGATGCATACTTTGGCCCAGCCAGCATGCAGTACTTCTTTGGAGAGGACCTGGAAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 90 bp | TTCTTGTATTGCTGCTGCCTTTGTTCCCGAAAATCCTGTACTCTCTaGGACAGCCGGTATGCTCGTTCTGCCTCTTCTTTCTCTAGCATC | + |
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Preference number: 6 (lower is better) Translates to: FLYCCCLCSRKSCTL*DSRYARSASSFSSI Trigger: GATGCTAGAGAAAGAAGAGGCAGAACGAGCATACCGGCTGTCCAAGAGAGTACAGGATTTTCGGGAACAAAGGCAGCAGCAATACAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 90 bp | ATCCCAGAAGTCAAATTCATGTCCATTCTTGTATTGCTGCTGCCTTaGTTCCCGAAAATCCTGTACTCTCTTGGACAGCCGGTATGCTCG | + |
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Preference number: 6 (lower is better) Translates to: IPEVKFMSILVLLLP*FPKILYSLGQPVCS Trigger: CGAGCATACCGGCTGTCCAAGAGAGTACAGGATTTTCGGGAACAAAGGCAGCAGCAATACAAGAATGGACATGAATTTGACTTCTGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CCA 72 bp | CCCATGACTCGGTTCCGCACATTGAAGAATCGGCTTTaGCGTTCCTTTTCACGATTTCTTCTAGCTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: PMTRFRTLKNRL*RSFSRFLLASM Trigger: CATTGAAGCTAGAAGAAATCGTGAAAAGGAACGCCAAAGCCGATTCTTCAATGTGCGGAACCGAGTCATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 72 bp | CCCCATGACTCGGTTCCGCACATTGAAGAATCGGCTTaGGCGTTCCTTTTCACGATTTCTTCTAGCTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: PHDSVPHIEESA*AFLFTISSSFN Trigger: ATTGAAGCTAGAAGAAATCGTGAAAAGGAACGCCAAAGCCGATTCTTCAATGTGCGGAACCGAGTCATGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 72 bp | GTCAAATTCATGTCCATTCTTGTATTGCTGCTGCCTTaGTTCCCGAAAATCCTGTACTCTCTTGGACAGCCG | + |
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Preference number: 6 (lower is better) Translates to: VKFMSILVLLLP*FPKILYSLGQP Trigger: CGGCTGTCCAAGAGAGTACAGGATTTTCGGGAACAAAGGCAGCAGCAATACAAGAATGGACATGAATTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 90 bp | TCCTGGAATTGGTCTGGATCCCAGAAGTCAAATTCATGTCCATTCTaGTATTGCTGCTGCCTTTGTTCCCGAAAATCCTGTACTCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SWNWSGSQKSNSCPF*YCCCLCSRKSCTLL Trigger: CAAGAGAGTACAGGATTTTCGGGAACAAAGGCAGCAGCAATACAAGAATGGACATGAATTTGACTTCTGGGATCCAGACCAATTCCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS GCA 72 bp | GGATCCCAGAAGTCAAATTCATGTCCATTCTTGTATTaGTGCTGCCTTTGTTCCCGAAAATCCTGTACTCTC | + |
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Preference number: 6 (lower is better) Translates to: GSQKSNSCPFLY*CCLCSRKSCTL Trigger: GAGAGTACAGGATTTTCGGGAACAAAGGCAGCAGCAATACAAGAATGGACATGAATTTGACTTCTGGGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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| CDS CAA 72 bp | TGGTCTGGATCCCAGAAGTCAAATTCATGTCCATTCTaGTATTGCTGCTGCCTTTGTTCCCGAAAATCCTGT | + |
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Preference number: 6 (lower is better) Translates to: WSGSQKSNSCPF*YCCCLCSRKSC Trigger: ACAGGATTTTCGGGAACAAAGGCAGCAGCAATACAAGAATGGACATGAATTTGACTTCTGGGATCCAGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026288.5 |
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