Pregenerated sensors for RHPN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022580Ensembl transcript IDs: ENSMUST00000023244.6, ENSMUST00000121137.9, ENSMUST00000149407.8
Found 292 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCCGTCGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATaGCACGACCTGCAGGCTCACGCCTTCCTCGCCCATGCTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: CPSGSCATWLRAGQQ*HDLQAHAFLAHAPQ Trigger: CTGAGGAGCATGGGCGAGGAAGGCGTGAGCCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCGACGGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR CCA 90 bp | ACAGCAGTGCTGCCCGTCGGGGTCCTGTGCCACGTGGCTCAGGGCTaGGCAGCAATGACACGACCTGCAGGCTCACGCCTTCCTCGCCCA | + |
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Preference number: 1 (lower is better) Translates to: TAVLPVGVLCHVAQG*AAMTRPAGSRLPRP Trigger: TGGGCGAGGAAGGCGTGAGCCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR GCA 90 bp | CCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGCTaGAGCCTCCTCGGGCTGCATGAATGGGTGACAGCCGCCCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PGPSSGSQNPGGWKS*SLLGLHEWVTAAPW Trigger: CCAGGGGGCGGCTGTCACCCATTCATGCAGCCCGAGGAGGCTGCAGCTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR GCA 90 bp | GGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATGACACGACCTaGAGGCTCACGCCTTCCTCGCCCATGCTCCTCAGCTGTGTCACC | + |
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Preference number: 1 (lower is better) Translates to: GPVPRGSGLGSNDTT*RLTPSSPMLLSCVT Trigger: GGTGACACAGCTGAGGAGCATGGGCGAGGAAGGCGTGAGCCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR GCA 90 bp | CACACTCTCTCTGGTTCCACAGCAGTGCTGCCCGTCGGGGTCCTGTaGCACGTGGCTCAGGGCTGGGCAGCAATGACACGACCTGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: HTLSGSTAVLPVGVL*HVAQGWAAMTRPAG Trigger: GCCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCTGTGGAACCAGAGAGAGTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR GCA 90 bp | GGGCATCGGTGTCTCAAAACCACACTCTCTCTGGTTCCACAGCAGTaGTGCCCGTCGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GHRCLKTTLSLVPQQ*CPSGSCATWLRAGQ Trigger: CTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCTGTGGAACCAGAGAGAGTGTGGTTTTGAGACACCGATGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR CCA 90 bp | AAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGGCTGGCCCTaGACGCGGATGTCTGGCCAGGGTGATGGGCGGCAGAGCCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: KKAASSGLTPLTGWP*TRMSGQGDGRQSPG Trigger: TCCAGGGCTCTGCCGCCCATCACCCTGGCCAGACATCCGCGTCCAGGGCCAGCCGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR CCA 90 bp | CTTTACCTCAGCCTGACCCCCAGGGACGACAGCAGCGATGAGGACTaGAGAGTCTCCGCGCAGCGTGAACCCGAAGCTTCCCTCTCCTCG | + |
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Preference number: 1 (lower is better) Translates to: LYLSLTPRDDSSDED*RVSAQREPEASLSS Trigger: CGAGGAGAGGGAAGCTTCGGGTTCACGCTGCGCGGAGACTCTCCAGTCCTCATCGCTGCTGTCGTCCCTGGGGGTCAGGCTGAGGTAAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR TCA 90 bp | AGAGCAACTGGATGTGAGGATAGAGCCAGGCATCCGCAGAGTAGATaGGGCATGGCAGGGGCCAAGGGGCCTGCTGCTGGAGGACAGCCC | + |
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Preference number: 1 (lower is better) Translates to: RATGCEDRARHPQSR*GMAGAKGPAAGGQP Trigger: GGGCTGTCCTCCAGCAGCAGGCCCCTTGGCCCCTGCCATGCCTCATCTACTCTGCGGATGCCTGGCTCTATCCTCACATCCAGTTGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR TCA 90 bp | GCGTTTCATATGGTGTCCCCACCCTGTCCCTCTGAGTCCGGGTCCTaGGCCCATCCTTCTGGGGAACCTGTCAGGACCTGCGTGGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: AFHMVSPPCPSESGS*AHPSGEPVRTCVGA Trigger: TGCTCCCACGCAGGTCCTGACAGGTTCCCCAGAAGGATGGGCTCAGGACCCGGACTCAGAGGGACAGGGTGGGGACACCATATGAAACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR GCA 90 bp | CATCGGTGTCTCAAAACCACACTCTCTCTGGTTCCACAGCAGTGCTaGCCGTCGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: HRCLKTTLSLVPQQC*PSGSCATWLRAGQQ Trigger: TTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCTGTGGAACCAGAGAGAGTGTGGTTTTGAGACACCGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR CCA 90 bp | TTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGGCTaGCCCTGGACGCGGATGTCTGGCCAGGGTGATGGGCGGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: FQKKAASSGLTPLTG*PWTRMSGQGDGRQS Trigger: GCTCTGCCGCCCATCACCCTGGCCAGACATCCGCGTCCAGGGCCAGCCGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR TCA 90 bp | CTGGGGGTTGGAAGAGCTGCAGCCTCCTCGGGCTGCATGAATGGGTaGCAGCCGCCCCCTGGTGGTTGCAGAGAGCAAGTTCTCCATCTA | + |
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Preference number: 1 (lower is better) Translates to: LGVGRAAASSGCMNG*QPPPGGCREQVLHL Trigger: TAGATGGAGAACTTGCTCTCTGCAACCACCAGGGGGCGGCTGTCACCCATTCATGCAGCCCGAGGAGGCTGCAGCTCTTCCAACCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR TCA 90 bp | TCAGAATCCTGGGGGTTGGAAGAGCTGCAGCCTCCTCGGGCTGCATaGATGGGTGACAGCCGCCCCCTGGTGGTTGCAGAGAGCAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: SESWGLEELQPPRAA*MGDSRPLVVAESKF Trigger: GAACTTGCTCTCTGCAACCACCAGGGGGCGGCTGTCACCCATTCATGCAGCCCGAGGAGGCTGCAGCTCTTCCAACCCCCAGGATTCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR GCA 90 bp | CCATGCTCCTCAGCTGTGTCACCACCTCCAGGTGCTTCCACCACTTaGACGGCTGCCCGTTCACGGACACGATGTAGTCGCCCTCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: PCSSAVSPPPGASTT*TAARSRTRCSRPPS Trigger: TGAAGGAGGGCGACTACATCGTGTCCGTGAACGGGCAGCCGTGCAAGTGGTGGAAGCACCTGGAGGTGGTGACACAGCTGAGGAGCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR CCA 90 bp | AATCCTGGGGGTTGGAAGAGCTGCAGCCTCCTCGGGCTGCATGAATaGGTGACAGCCGCCCCCTGGTGGTTGCAGAGAGCAAGTTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: NPGGWKSCSLLGLHE*VTAAPWWLQRASSP Trigger: TGGAGAACTTGCTCTCTGCAACCACCAGGGGGCGGCTGTCACCCATTCATGCAGCCCGAGGAGGCTGCAGCTCTTCCAACCCCCAGGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR CCA 90 bp | CTTCTCTTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTaGAAGAGCTGCAGCCTCCTCGGGCTGCATGAATGGGTGACAGCC | + |
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Preference number: 1 (lower is better) Translates to: LLFPGPSSGSQNPGG*KSCSLLGLHEWVTA Trigger: GGCTGTCACCCATTCATGCAGCCCGAGGAGGCTGCAGCTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAAGAGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR CCA 90 bp | GAAGTCAGTCACCTTCACCTGCGACAGGCTAGGCATCCTCACCTCTaGGGTCTGGTGAGTCTTGGGTTGGATGTCTGGGGCCTCCGTAGC | + |
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Preference number: 1 (lower is better) Translates to: EVSHLHLRQARHPHL*GLVSLGLDVWGLRS Trigger: GCTACGGAGGCCCCAGACATCCAACCCAAGACTCACCAGACCCCAGAGGTGAGGATGCCTAGCCTGTCGCAGGTGAAGGTGACTGACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR TCA 90 bp | AAATTTGCAAGTGTTGCGGAGCCTGAGCGGCCTTGTCCATTCTGCTaGGCTGGAGATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: KFASVAEPERPCPFC*AGDCPGRAGEWIPW Trigger: CCAGGGGATCCACTCACCTGCCCTCCCGGGACAATCTCCAGCTCAGCAGAATGGACAAGGCCGCTCAGGCTCCGCAACACTTGCAAATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR CCA 90 bp | CACGATGTAGTCGCCCTCCTTCAGGCCAGCGGACTGCGGAGAATGTaGATCGGTGAGGTGGTGGCAGTATCTAGCGGTCCTCTAGGATTC | + |
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Preference number: 1 (lower is better) Translates to: HDVVALLQASGLRRM*IGEVVAVSSGPLGF Trigger: GAATCCTAGAGGACCGCTAGATACTGCCACCACCTCACCGATCCACATTCTCCGCAGTCCGCTGGCCTGAAGGAGGGCGACTACATCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR GCA 90 bp | CCGAAGCTTCCCTCTCCTCGAGTCATGTGCACCGGCCCTACCAACTaGCATCGGTTCTTGGTTGAAAACACAGACAAGGGTCCCAGCCGA | + |
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Preference number: 1 (lower is better) Translates to: PKLPSPRVMCTGPTN*HRFLVENTDKGPSR Trigger: TCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGTAGGGCCGGTGCACATGACTCGAGGAGAGGGAAGCTTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR GCA 90 bp | TCTCCGCGCAGCGTGAACCCGAAGCTTCCCTCTCCTCGAGTCATGTaGACCGGCCCTACCAACTGCCATCGGTTCTTGGTTGAAAACACA | + |
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Preference number: 1 (lower is better) Translates to: SPRSVNPKLPSPRVM*TGPTNCHRFLVENT Trigger: TGTGTTTTCAACCAAGAACCGATGGCAGTTGGTAGGGCCGGTGCACATGACTCGAGGAGAGGGAAGCTTCGGGTTCACGCTGCGCGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR CCA 90 bp | ATCTTCATGGCTTCAGCCATGCATAGCTCAGGACTGCGTTTCATATaGTGTCCCCACCCTGTCCCTCTGAGTCCGGGTCCTGAGCCCATC | + |
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Preference number: 1 (lower is better) Translates to: IFMASAMHSSGLRFI*CPHPVPLSPGPEPI Trigger: GATGGGCTCAGGACCCGGACTCAGAGGGACAGGGTGGGGACACCATATGAAACGCAGTCCTGAGCTATGCATGGCTGAAGCCATGAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR CCA 90 bp | TGCCATCGGTTCTTGGTTGAAAACACAGACAAGGGTCCCAGCCGATaGAAGAAGTCAGTCACCTTCACCTGCGACAGGCTAGGCATCCTC | + |
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Preference number: 1 (lower is better) Translates to: CHRFLVENTDKGPSR*KKSVTFTCDRLGIL Trigger: GAGGATGCCTAGCCTGTCGCAGGTGAAGGTGACTGACTTCTTCCATCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR TCA 90 bp | ATACATACAGCCTTTCTGTTTCCATGCGGAACCTTCCAGGGCCTTTaGGGGAGAGCATCTTCATGGCTTCAGCCATGCATAGCTCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: IHTAFLFPCGTFQGL*GRASSWLQPCIAQD Trigger: GTCCTGAGCTATGCATGGCTGAAGCCATGAAGATGCTCTCCCTCAAAGGCCCTGGAAGGTTCCGCATGGAAACAGAAAGGCTGTATGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR CAA 90 bp | GGGCGGCAGAGCCCTGGACTGTGTAGGCAGACCTGGAGCATGGACTaGGGTGCTCTCCCCTGGGAGCCCCTGGGCAGAGGCTTGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: GRQSPGLCRQTWSMD*GALPWEPLGRGLKG Trigger: CCCTTTCAAGCCTCTGCCCAGGGGCTCCCAGGGGAGAGCACCCAAGTCCATGCTCCAGGTCTGCCTACACAGTCCAGGGCTCTGCCGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAGTGCTGCCCGTCGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCACGCCTTCCTCGCCCATaGTCCTCAGCTGTGTCACCA | + |
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Preference number: 2 (lower is better) Translates to: TAVLPVGVLCHVAQGWAARLPRP*SSAVSP Trigger: TGGTGACACAGCTGAGGAGCATGGGCGAGGAAGGCG...TGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGTGCTGCCCGTCGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAAAGGCATCCTCACCTCTaGGGTCTGGTGAGTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: QQCCPSGSCATWLRAGQQRHPHL*GLVSLG Trigger: CCCAAGACTCACCAGACCCCAGAGGTGAGGATGCCT...TTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGGGCTACTAGGAACCAGGCAGAATCAGGGTGGAGCCGTCAGGGTACATGCCCCCCCACAGCCATCCTaGGCACACAGGGATACGGGG | + |
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Preference number: 2 (lower is better) Translates to: EGLLGTRQNQGGAVRVHAPPQPS*AHRDTG Trigger: CCCCGTATCCCTGTGTGCTCAGGATGGCTGTGGGGG...GGCATGTACCCTGACGGCTCCACCCTGATTCTGCCTGGTTCCTAGTAGCCCTTC 62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR-3UTR TCA 90 bp | GAGATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTAAGCAAGGGAGGCTGGTaGCCAGAAGGGCTACTAGGA | + |
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Preference number: 2 (lower is better) Translates to: EIVPGGQVSGSPGWVPLLSKGGW*PEGLLG Trigger: TCCTAGTAGCCCTTCTGGTCACCAGCCTCCCTTGCT...TAGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAATCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR-3UTR CCA 90 bp | GTCGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATGACACGACCTGCACCCGCTAGGCACATCTaGCTAGTTGGAGCTGATTCC | + |
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Preference number: 2 (lower is better) Translates to: VGVLCHVAQGWAAMTRPAPARHI*LVGADS Trigger: GGAATCAGCTCCAACTAGCCAGATGTGCCTAGCGGG...TGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCCGATGGAAGAAGTCAGTCACCTTCACCTGCGACAGGCTAGGCATCCTCACCCCCCACAGCCATCCTaGGCACACAGGGATACGGGG | + |
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Preference number: 2 (lower is better) Translates to: QPMEEVSHLHLRQARHPHPPQPS*AHRDTG Trigger: CCCCGTATCCCTGTGTGCTCAGGATGGCTGTGGGGG...GTGAGGATGCCTAGCCTGTCGCAGGTGAAGGTGACTGACTTCTTCCATCGGCTG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATGACACGACCTGCAGGCTCAACCTCTGGGGTCTGGTaGGTCTTGGGTTGGATGTCT | + |
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Preference number: 2 (lower is better) Translates to: VLCHVAQGWAAMTRPAGSTSGVW*VLGWMS Trigger: AGACATCCAACCCAAGACTCACCAGACCCCAGAGGT...TGAGCCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACGACAGCAGCGATGAGGACTGGAGAGTCTCCGCGCAGCGTGAACCCGAAGTCAGTCACCTTCACCTaGGACAGGCTAGGCATCCTC | + |
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Preference number: 2 (lower is better) Translates to: GTTAAMRTGESPRSVNPKSVTFT*DRLGIL Trigger: GAGGATGCCTAGCCTGTCGCAGGTGAAGGTGACTGA...CTTCGGGTTCACGCTGCGCGGAGACTCTCCAGTCCTCATCGCTGCTGTCGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGATCCCCTGGGTGGGTGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGTTGGGTGCTCTCCCCTaGGAGCCCCTGGGCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: VDPLGGCLSYFRRKLRLQLGALP*EPLGRG Trigger: GCCTCTGCCCAGGGGCTCCCAGGGGAGAGCACCCAA...CTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCACCCACCCAGGGGATCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR CAA 90 bp | GGCAGAGGCTTGAAAGGGCGTGGGTGGGTTGCTGACTATGGCCGCTaGCTTCTCTTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GRGLKGRGWVADYGR*LLFPGPSSGSQNPG Trigger: CCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAAGAGAAGCAAGCGGCCATAGTCAGCAACCCACCCACGCCCTTTCAAGCCTCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGCTGCAGCCATCCGCAGAGTAGATaGGGCATGGCAGGGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: FPGPSSGSQNPGGWKSCSHPQSR*GMAGAK Trigger: CTTGGCCCCTGCCATGCCTCATCTACTCTGCGGATG...GCTGCAGCTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGCTGCAGCTCTGAGTCCGGGTCCTaGGCCCATCCTTCTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: FPGPSSGSQNPGGWKSCSSESGS*AHPSGE Trigger: TTCCCCAGAAGGATGGGCTCAGGACCCGGACTCAGA...GCTGCAGCTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCTTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGGGACAGCCCCAGCTCTaGTGCCCTCTGCAGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: ASLSWAVLRFSESWGLEEGQPQL*CPLQRE Trigger: TTCCCTCTGCAGAGGGCAGCAGAGCTGGGGCTGTCC...CTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAAGAGAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGCTACTAGGAACCAGGCAGAATCAGGGTGGAGCCGTCAGGGTACATGCCAGAGTAGATGAGGCATaGCAGGGGCCAAGGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: EGLLGTRQNQGGAVRVHARVDEA*QGPRGL Trigger: CAGGCCCCTTGGCCCCTGCCATGCCTCATCTACTCT...GGCATGTACCCTGACGGCTCCACCCTGATTCTGCCTGGTTCCTAGTAGCCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTATTTCTGTCAGGACCTGCGTaGGAGCAGGTAGAATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: IVPGGQVSGSPGWVPLLFLSGPA*EQVEWA Trigger: TGCCCATTCTACCTGCTCCCACGCAGGTCCTGACAG...AAATAGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR CAA 90 bp | GTGACACAGTTCCTGTTGGTGCAGGGGTCAGGGTGGCTTCCAGTCTaGCCTTGTTTATTCTTGCGGCTCCAGCCAAGGATGGGCCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: VTQFLLVQGSGWLPV*PCLFLRLQPRMGQG Trigger: CCCCTGGCCCATCCTTGGCTGGAGCCGCAAGAATAAACAAGGCAAGACTGGAAGCCACCCTGACCCCTGCACCAACAGGAACTGTGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTACTGAGACATCTCTCTaGTGGGGTAAAGTGACCGAA | + |
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Preference number: 2 (lower is better) Translates to: GDCPGRAGEWIPWVGASPTETSL*WGKVTE Trigger: TTCGGTCACTTTACCCCACCAGAGAGATGTCTCAGT...AGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAATCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGCTGCAGCCTGAGCCCATCCTTCTaGGGAACCTGTCAGGACCTG | + |
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Preference number: 2 (lower is better) Translates to: FPGPSSGSQNPGGWKSCSLSPSF*GTCQDL Trigger: CAGGTCCTGACAGGTTCCCCAGAAGGATGGGCTCAG...GCTGCAGCTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCTTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGCCGCCCCCTGGTGGTTaGAGAGAGCAAGTTCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: ASLSWAVLRFSESWGLEEPPPGG*REQVLH Trigger: ATGGAGAACTTGCTCTCTGCAACCACCAGGGGGCGG...CTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAAGAGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| 3UTR-3UTR CCA 90 bp | GTCGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATGACACGACCTGCAACTGCCATCGGTTCTTaGTTGAAAACACAGACAAGG | + |
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Preference number: 2 (lower is better) Translates to: VGVLCHVAQGWAAMTRPATAIGS*LKTQTR Trigger: CCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGT...TGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGCAGCCCCAGCTCTGCTaGCCTCTGCAGAGGGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: CLSYFRRKLRLQDSLHSPQPQLC*PLQRET Trigger: AGTTTCCCTCTGCAGAGGGCAGCAGAGCTGGGGCTG...CGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGCCCGCTAGGCACATCTaGCTAGTTGGAGCTGATTCC | + |
|
Preference number: 2 (lower is better) Translates to: CLSYFRRKLRLQDSLHSPPARHI*LVGADS Trigger: GGAATCAGCTCCAACTAGCCAGATGTGCCTAGCGGG...CGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGTGGGTGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCTGGGAGCAGGTAGAATaGGCAACAGGATGGTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LGGCLSYFRRKLRLQDSLWEQVE*ATGWSG Trigger: TCCAGACCATCCTGTTGCCCATTCTACCTGCTCCCA...GAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCACCCACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTAGGCACATCTGGCTAGTTGGAGCTGATTCCAGGGTGATGTACATAGGAGTAGAACCTGTCAGGACCTaGGTGGGAGCAGGTAGAATG | + |
|
Preference number: 2 (lower is better) Translates to: ARHIWLVGADSRVMYIGVEPVRT*VGAGRM Trigger: CATTCTACCTGCTCCCACGCAGGTCCTGACAGGTTC...TACTCCTATGTACATCACCCTGGAATCAGCTCCAACTAGCCAGATGTGCCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGGCTGGCCTTTCTGTTTCCATaGGGAACCTTCCAGGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SPISEESCVFRTHSTHRLAFLFP*GTFQGL Trigger: AAGGCCCTGGAAGGTTCCGCATGGAAACAGAAAGGC...CAGCCGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGTGGGTGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCGAGCCCAGGGTTTCTTaGATTCTCTACCACGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LGGCLSYFRRKLRLQDSLEPRVS*ILYHGD Trigger: ATCTCCGTGGTAGAGAATGCAAGAAACCCTGGGCTC...GAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCACCCACCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTAGGCACATCTGGCTAGTTGGAGCTGATTCCAGGGTGATGTACATAGGAGTACCATCGGTTCTTGGTTaGAAACACAGACAAGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: ARHIWLVGADSRVMYIGVPSVLG*KHRQGS Trigger: GGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGG...TACTCCTATGTACATCACCCTGGAATCAGCTCCAACTAGCCAGATGTGCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCATGAGGGGACTGGAGATAAAAATGTCTTTGCTGAGATCTTACACACGGAAGAGCTCTGCTGCCCTCTaGAGAGGGAAACTACATCTG | + |
|
Preference number: 2 (lower is better) Translates to: SMRGLEIKMSLLRSYTRKSSAAL*RGKLHL Trigger: CAGATGTAGTTTCCCTCTGCAGAGGGCAGCAGAGCT...CTTCCGTGTGTAAGATCTCAGCAAAGACATTTTTATCTCCAGTCCCCTCATGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CCA 72 bp | GCGTCTTCAGGACTCACTCCACTCACCGGCTGGCCCTaGACGCGGATGTCTGGCCAGGGTGATGGGCGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ASSGLTPLTGWP*TRMSGQGDGRQ Trigger: CTGCCGCCCATCACCCTGGCCAGACATCCGCGTCCAGGGCCAGCCGGTGAGTGGAGTGAGTCCTGAAGACGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR TCA 72 bp | GGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATaGCACGACCTGCAGGCTCACGCCTTCCTCGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GSCATWLRAGQQ*HDLQAHAFLAH Trigger: ATGGGCGAGGAAGGCGTGAGCCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR GCA 72 bp | CCACGTGGCTCAGGGCTGGGCAGCAATGACACGACCTaGAGGCTCACGCCTTCCTCGCCCATGCTCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PRGSGLGSNDTT*RLTPSSPMLLS Trigger: GCTGAGGAGCATGGGCGAGGAAGGCGTGAGCCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR CCA 72 bp | AGGCAGACCTGGAGCATGGACTTGGGTGCTCTCCCCTaGGAGCCCCTGGGCAGAGGCTTGAAAGGGCGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RQTWSMDLGALP*EPLGRGLKGRG Trigger: CCCACGCCCTTTCAAGCCTCTGCCCAGGGGCTCCCAGGGGAGAGCACCCAAGTCCATGCTCCAGGTCTGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CCA 72 bp | GCCCTGGACTGTGTAGGCAGACCTGGAGCATGGACTTaGGTGCTCTCCCCTGGGAGCCCCTGGGCAGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALDCVGRPGAWT*VLSPGSPWAEA Trigger: AGCCTCTGCCCAGGGGCTCCCAGGGGAGAGCACCCAAGTCCATGCTCCAGGTCTGCCTACACAGTCCAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CCA 72 bp | GATGGGCGGCAGAGCCCTGGACTGTGTAGGCAGACCTaGAGCATGGACTTGGGTGCTCTCCCCTGGGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DGRQSPGLCRQT*SMDLGALPWEP Trigger: GGGCTCCCAGGGGAGAGCACCCAAGTCCATGCTCCAGGTCTGCCTACACAGTCCAGGGCTCTGCCGCCCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CCA 72 bp | AGCCTGACCCCCAGGGACGACAGCAGCGATGAGGACTaGAGAGTCTCCGCGCAGCGTGAACCCGAAGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLTPRDDSSDED*RVSAQREPEAS Trigger: GGAAGCTTCGGGTTCACGCTGCGCGGAGACTCTCCAGTCCTCATCGCTGCTGTCGTCCCTGGGGGTCAGGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR TCA 72 bp | ATGGTGTCCCCACCCTGTCCCTCTGAGTCCGGGTCCTaGGCCCATCCTTCTGGGGAACCTGTCAGGACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: MVSPPCPSESGS*AHPSGEPVRTC Trigger: GCAGGTCCTGACAGGTTCCCCAGAAGGATGGGCTCAGGACCCGGACTCAGAGGGACAGGGTGGGGACACCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTTCAGAATCCTGGGGGTaGGAAGAGCTGCAGCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GDCPGRAGEWIPWVGASPSESWG*EELQPP Trigger: AGGAGGCTGCAGCTCTTCCAACCCCCAGGATTCTGA...AGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAATCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR TCA 72 bp | GGATGTGAGGATAGAGCCAGGCATCCGCAGAGTAGATaGGGCATGGCAGGGGCCAAGGGGCCTGCTGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GCEDRARHPQSR*GMAGAKGPAAG Trigger: TCCAGCAGCAGGCCCCTTGGCCCCTGCCATGCCTCATCTACTCTGCGGATGCCTGGCTCTATCCTCACATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR TCA 72 bp | AGTGTTGCGGAGCCTGAGCGGCCTTGTCCATTCTGCTaGGCTGGAGATTGTCCCGGGAGGGCAGGTGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SVAEPERPCPFC*AGDCPGRAGEW Trigger: CCACTCACCTGCCCTCCCGGGACAATCTCCAGCTCAGCAGAATGGACAAGGCCGCTCAGGCTCCGCAACACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR GCA 72 bp | GCCAAGGGGCCTGCTGCTGGAGGACAGCCCCAGCTCTaGTGCCCTCTGCAGAGGGAAACTACATCTGGACTA | + |
|
Preference number: 3 (lower is better) Translates to: AKGPAAGGQPQL*CPLQRETTSGL Trigger: TAGTCCAGATGTAGTTTCCCTCTGCAGAGGGCAGCAGAGCTGGGGCTGTCCTCCAGCAGCAGGCCCCTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR GCA 72 bp | CTCAAAACCACACTCTCTCTGGTTCCACAGCAGTGCTaGCCGTCGGGGTCCTGTGCCACGTGGCTCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LKTTLSLVPQQC*PSGSCATWLRA Trigger: AGCCCTGAGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCTGTGGAACCAGAGAGAGTGTGGTTTTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR CCA 72 bp | GTCGCCCTCCTTCAGGCCAGCGGACTGCGGAGAATGTaGATCGGTGAGGTGGTGGCAGTATCTAGCGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VALLQASGLRRM*IGEVVAVSSGP Trigger: AGGACCGCTAGATACTGCCACCACCTCACCGATCCACATTCTCCGCAGTCCGCTGGCCTGAAGGAGGGCGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTAACCTTCCAGGGCCTTaGAGGGAGAGCATCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: GDCPGRAGEWIPWVGASPNLPGP*RESIFM Trigger: CATGAAGATGCTCTCCCTCAAAGGCCCTGGAAGGTT...AGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAATCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGCTGCAGCGCCGCCCCCTGGTGGTaGCAGAGAGCAAGTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FPGPSSGSQNPGGWKSCSAAPWW*QRASSP Trigger: TGGAGAACTTGCTCTCTGCAACCACCAGGGGGCGGC...GCTGCAGCTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR TCA 72 bp | GACTGCGTTTCATATGGTGTCCCCACCCTGTCCCTCTaGGTCCGGGTCCTGAGCCCATCCTTCTGGGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: DCVSYGVPTLSL*VRVLSPSFWGT Trigger: GGTTCCCCAGAAGGATGGGCTCAGGACCCGGACTCAGAGGGACAGGGTGGGGACACCATATGAAACGCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR GCA 72 bp | AAGGGGCCTGCTGCTGGAGGACAGCCCCAGCTCTGCTaGCCTCTGCAGAGGGAAACTACATCTGGACTACAC | + |
|
Preference number: 3 (lower is better) Translates to: KGPAAGGQPQLC*PLQRETTSGLH Trigger: GTGTAGTCCAGATGTAGTTTCCCTCTGCAGAGGGCAGCAGAGCTGGGGCTGTCCTCCAGCAGCAGGCCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR GCA 72 bp | GGTCCCAGCCGATGGAAGAAGTCAGTCACCTTCACCTaGGACAGGCTAGGCATCCTCACCTCTGGGGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GPSRWKKSVTFT*DRLGILTSGVW Trigger: CCAGACCCCAGAGGTGAGGATGCCTAGCCTGTCGCAGGTGAAGGTGACTGACTTCTTCCATCGGCTGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR GCA 72 bp | TCAGCTGTGTCACCACCTCCAGGTGCTTCCACCACTTaGACGGCTGCCCGTTCACGGACACGATGTAGTCGC | + |
|
Preference number: 3 (lower is better) Translates to: SAVSPPPGASTT*TAARSRTRCSR Trigger: GCGACTACATCGTGTCCGTGAACGGGCAGCCGTGCAAGTGGTGGAAGCACCTGGAGGTGGTGACACAGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR GCA 72 bp | TGTCTCAAAACCACACTCTCTCTGGTTCCACAGCAGTaGTGCCCGTCGGGGTCCTGTGCCACGTGGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CLKTTLSLVPQQ*CPSGSCATWLR Trigger: CCTGAGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCTGTGGAACCAGAGAGAGTGTGGTTTTGAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR GCA 72 bp | GGTCAGGGTGGCTTCCAGTCTTGCCTTGTTTATTCTTaGGGCTCCAGCCAAGGATGGGCCAGGGGCGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GQGGFQSCLVYS*GSSQGWARGGY Trigger: GTACCCGCCCCTGGCCCATCCTTGGCTGGAGCCGCAAGAATAAACAAGGCAAGACTGGAAGCCACCCTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR CCA 72 bp | GGACCTGCGTGGGAGCAGGTAGAATGGGCAACAGGATaGTCTGGAAGCTGGGGAAGCATGAGGGGACTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GPAWEQVEWATG*SGSWGSMRGLE Trigger: CTCCAGTCCCCTCATGCTTCCCCAGCTTCCAGACCATCCTGTTGCCCATTCTACCTGCTCCCACGCAGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CCA 72 bp | TCTCTTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTaGGGGTTGGAAGAGCTGCAGCCTCCTCGGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLSWAVLRFSES*GLEELQPPRAA Trigger: TGCAGCCCGAGGAGGCTGCAGCTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CCA 72 bp | CACCTTCACCTGCGACAGGCTAGGCATCCTCACCTCTaGGGTCTGGTGAGTCTTGGGTTGGATGTCTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HLHLRQARHPHL*GLVSLGLDVWG Trigger: GCCCCAGACATCCAACCCAAGACTCACCAGACCCCAGAGGTGAGGATGCCTAGCCTGTCGCAGGTGAAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR TCA 72 bp | GTGATGTACATAGGAGTATGGCCCCCACAGCCATCCTaGGCACACAGGGATACGGGGTGTCCAGCTCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VMYIGVWPPQPS*AHRDTGCPAQG Trigger: CCCCTGAGCTGGACACCCCGTATCCCTGTGTGCTCAGGATGGCTGTGGGGGCCATACTCCTATGTACATCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR GCA 72 bp | TCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGCTaGAGCCTCCTCGGGCTGCATGAATGGGTGACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSGSQNPGGWKS*SLLGLHEWVTA Trigger: GGCTGTCACCCATTCATGCAGCCCGAGGAGGCTGCAGCTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR GCA 72 bp | CCCTGGGTGGGTGCCTCTCCTATTTCAGAAGAAAGCTaGGTCTTCAGGACTCACTCCACTCACCGGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PWVGASPISEES*VFRTHSTHRLA Trigger: GGCCAGCCGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCACCCACCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CCA 72 bp | GAGCCCATCCTTCTGGGGAACCTGTCAGGACCTGCGTaGGAGCAGGTAGAATGGGCAACAGGATGGTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EPILLGNLSGPA*EQVEWATGWSG Trigger: TCCAGACCATCCTGTTGCCCATTCTACCTGCTCCCACGCAGGTCCTGACAGGTTCCCCAGAAGGATGGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCGCCCTCCTTCAGGCCAGCGGACTGCGGAGAATGTGGATCGGTGAGGTGGTGGCCATCGGTTCTTGGTaGAAAACACAGACAAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: VALLQASGLRRMWIGEVVAIGSW*KTQTRV Trigger: GACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGC...CACCACCTCACCGATCCACATTCTCCGCAGTCCGCTGGCCTGAAGGAGGGCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR GCA 72 bp | AGCGTGAACCCGAAGCTTCCCTCTCCTCGAGTCATGTaGACCGGCCCTACCAACTGCCATCGGTTCTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SVNPKLPSPRVM*TGPTNCHRFLV Trigger: AACCAAGAACCGATGGCAGTTGGTAGGGCCGGTGCACATGACTCGAGGAGAGGGAAGCTTCGGGTTCACGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR CCA 72 bp | GCTTCAGCCATGCATAGCTCAGGACTGCGTTTCATATaGTGTCCCCACCCTGTCCCTCTGAGTCCGGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ASAMHSSGLRFI*CPHPVPLSPGP Trigger: AGGACCCGGACTCAGAGGGACAGGGTGGGGACACCATATGAAACGCAGTCCTGAGCTATGCATGGCTGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCGCCCTCCTTCAGGCCAGCGGACTGCGGAGAATGTGGATCGGTGAGGTGGTGAACTGCCATCGGTTCTaGGTTGAAAACACAGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: VALLQASGLRRMWIGEVVNCHRF*VENTDK Trigger: CTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTT...CACCACCTCACCGATCCACATTCTCCGCAGTCCGCTGGCCTGAAGGAGGGCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR GCA 72 bp | TCCTGTTGGTGCAGGGGTCAGGGTGGCTTCCAGTCTTaGCTTGTTTATTCTTGCGGCTCCAGCCAAGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SCWCRGQGGFQS*LVYSCGSSQGW Trigger: CCATCCTTGGCTGGAGCCGCAAGAATAAACAAGGCAAGACTGGAAGCCACCCTGACCCCTGCACCAACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR CCA 72 bp | ACCAGAAGGGCTACTAGGAACCAGGCAGAATCAGGGTaGAGCCGTCAGGGTACATGCCCAGAGCAACTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TRRATRNQAESG*SRQGTCPEQLD Trigger: ATCCAGTTGCTCTGGGCATGTACCCTGACGGCTCCACCCTGATTCTGCCTGGTTCCTAGTAGCCCTTCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR GCA 72 bp | CCCTCTCCTCGAGTCATGTGCACCGGCCCTACCAACTaGCATCGGTTCTTGGTTGAAAACACAGACAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PSPRVMCTGPTN*HRFLVENTDKG Trigger: ACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGTAGGGCCGGTGCACATGACTCGAGGAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTAGGCACATCTGGCTAGTTGGAGCTGATTCCAGGGTGATGTACATAGGAGTACTGGTGAGTCTTGGGTaGGATGTCTGGGGCCTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: ARHIWLVGADSRVMYIGVLVSLG*DVWGLR Trigger: ACGGAGGCCCCAGACATCCAACCCAAGACTCACCAG...TACTCCTATGTACATCACCCTGGAATCAGCTCCAACTAGCCAGATGTGCCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR CCA 72 bp | CCAGCTCTGCTGCCCTCTGCAGAGGGAAACTACATCTaGACTACACTGAGACATCTCTCTGGTGGGGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PALLPSAEGNYI*TTLRHLSGGVK Trigger: CTTTACCCCACCAGAGAGATGTCTCAGTGTAGTCCAGATGTAGTTTCCCTCTGCAGAGGGCAGCAGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CCA 72 bp | CTCGGGCTGCATGAATGGGTGACAGCCGCCCCCTGGTaGTTGCAGAGAGCAAGTTCTCCATCTAATTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LGLHEWVTAAPW*LQRASSPSNLF Trigger: AAACAAATTAGATGGAGAACTTGCTCTCTGCAACCACCAGGGGGCGGCTGTCACCCATTCATGCAGCCCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR TCA 72 bp | TGGACTACACTGAGACATCTCTCTGGTGGGGTAAAGTaGCCGAAGCTTCAGTACCCGACTCAGACTCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: WTTLRHLSGGVK*PKLQYPTQTHL Trigger: GAGGTGAGTCTGAGTCGGGTACTGAAGCTTCGGTCACTTTACCCCACCAGAGAGATGTCTCAGTGTAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR TCA 72 bp | GCCTTTCTGTTTCCATGCGGAACCTTCCAGGGCCTTTaGGGGAGAGCATCTTCATGGCTTCAGCCATGCATA | + |
|
Preference number: 3 (lower is better) Translates to: AFLFPCGTFQGL*GRASSWLQPCI Trigger: TATGCATGGCTGAAGCCATGAAGATGCTCTCCCTCAAAGGCCCTGGAAGGTTCCGCATGGAAACAGAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CCA 72 bp | TTCTTGGTTGAAAACACAGACAAGGGTCCCAGCCGATaGAAGAAGTCAGTCACCTTCACCTGCGACAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: FLVENTDKGPSR*KKSVTFTCDRL Trigger: TAGCCTGTCGCAGGTGAAGGTGACTGACTTCTTCCATCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCTTTGAGGGAGAGCATCTTCATGGCTTCAGCCATGCATAGCTCAGGACTGGAGATAAAAATGTCTTaGCTGAGATCTTACACACGG | + |
|
Preference number: 3 (lower is better) Translates to: GPLRESIFMASAMHSSGLEIKMS*LRSYTR Trigger: CCGTGTGTAAGATCTCAGCAAAGACATTTTTATCTC...CAGTCCTGAGCTATGCATGGCTGAAGCCATGAAGATGCTCTCCCTCAAAGGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CCA 72 bp | AAACTACATCTGGACTACACTGAGACATCTCTCTGGTaGGGTAAAGTGACCGAAGCTTCAGTACCCGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: KLHLDYTETSLW*GKVTEASVPDS Trigger: TGAGTCGGGTACTGAAGCTTCGGTCACTTTACCCCACCAGAGAGATGTCTCAGTGTAGTCCAGATGTAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR GCA 72 bp | TTTCTTTCTAGTTCGGGGACTGAGCCCAGGGTTTCTTaGATTCTCTACCACGGAGATACATACAGCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FLSSSGTEPRVS*ILYHGDTYSLS Trigger: AGAAAGGCTGTATGTATCTCCGTGGTAGAGAATGCAAGAAACCCTGGGCTCAGTCCCCGAACTAGAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | CGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATGACACGACCTGCAGGCGGTCTTCTGGGTGCTaGGGCAGTGTGGGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGPVPRGSGLGSNDTTCRRSSGC*GSVGPR Trigger: CCTGGGCCCCACACTGCCGCAGCACCCAGAAGACCG...CCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGTGCTGCCCGTCGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCATCTCGGACAGGTGGCTaGGCCATGGCCCGGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TAVLPVGVLCHVAQGWAASRTGG*AMARCT Trigger: TGTGCACCGGGCCATGGCCCAGCCACCTGTCCGAGA...TGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTATTTCAGGGTGCTGCGGCAGTGTaGGGCCCAGGGGCTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPGGQVSGSPGWVPLLFQGAAAV*GPGAHG Trigger: CCCATGAGCCCCTGGGCCCCACACTGCCGCAGCACC...CTGAAATAGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | CGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATGACACGACCTGCAGGGGGGCTCATGGGGAGTaGAGGGCTGGAAGACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGPVPRGSGLGSNDTTCRGAHGE*RAGRRA Trigger: AGCACGTCTTCCAGCCCTCCACTCCCCATGAGCCCC...CCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCG 67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR CAA 72 bp | TTGGGTGCTCTCCCCTGGGAGCCCCTGGGCAGAGGCTaGAAAGGGCGTGGGTGGGTTGCTGACTATGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LGALPWEPLGRG*KGRGWVADYGR Trigger: GCGGCCATAGTCAGCAACCCACCCACGCCCTTTCAAGCCTCTGCCCAGGGGCTCCCAGGGGAGAGCACCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | CGTTTCATATGGTGTCCCCACCCTGTCCCTCTGAGTCCGGGTCCTGAGCCCATCGGCCCGCCTCGTCCCTaGTGGGAGTCCTCGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RFIWCPHPVPLSPGPEPIGPPRP*WESSWP Trigger: AGGCCACGAGGACTCCCAGCAGGGACGAGGCGGGCC...GATGGGCTCAGGACCCGGACTCAGAGGGACAGGGTGGGGACACCATATGAAACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | CTGGTTCCACAGCAGTGCTGCCCGTCGGGGTCCTGTGCCACGTGGCTCAGGGCTTCTGGGCTTGGCGCGTaGGAGAAGTTCTCCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVPQQCCPSGSCATWLRASGLGA*EKFSLR Trigger: CCTGAGGGAGAACTTCTCCCACGCGCCAAGCCCAGA...AGCCCTGAGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCTGTGGAACCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGTGCTGCCCGTCGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCATATTCAGTTGCCACCTaGGCAGCTTCCTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAVLPVGVLCHVAQGWAAYSVAT*AASWAS Trigger: GCTGGCCCAGGAAGCTGCCCAGGTGGCAACTGAATA...TGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGTCTCCGCGCAGCGTGAACCCGAAGCTTCCCTCTCCTCGAGTCATGTGGGTGCTGCGGCAGTGTaGGGCCCAGGGGCTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: WRVSAQREPEASLSSSHVGAAAV*GPGAHG Trigger: CCCATGAGCCCCTGGGCCCCACACTGCCGCAGCACC...CACATGACTCGAGGAGAGGGAAGCTTCGGGTTCACGCTGCGCGGAGACTCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR TCA 90 bp | ATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTATTTTGGAGCCGAGCCCTGTaGCTCTGCAGCTGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVPGGQVSGSPGWVPLLFWSRAL*LCSWPG Trigger: GCCTGGCCAGCTGCAGAGTCACAGGGCTCGGCTCCA...AAATAGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR TCA 90 bp | GAGATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTATCTCCCTCAGGAGTCTaGAGGCCCCAGCAGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EIVPGGQVSGSPGWVPLLSPSGV*RPQQPS Trigger: AGAGGGCTGCTGGGGCCTTCAGACTCCTGAGGGAGA...TAGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAATCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGGGTCCCAGCCGATGGAAGAAGTCAGTCACCTTCACCTGCGACAGGCAAGGCCAGAGCCCGCTaGTGTGCCGGGACCCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QTRVPADGRSQSPSPATGKARAR*CAGTPV Trigger: CACGGGGGTCCCGGCACAGCAGCGGGCTCTGGCCTT...GCCTGTCGCAGGTGAAGGTGACTGACTTCTTCCATCGGCTGGGACCCTTGTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | CGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATGACACGACCTGCAGGCCTTGCGCAGGACTCTaGACAAGGTGTGAAGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGPVPRGSGLGSNDTTCRPCAGL*TRCEAA Trigger: TGCGGCTTCACACCTTGTGCAGAGTCCTGCGCAAGG...CCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGCAGACCTGGAGCATGGACTTGGGTGCTCTCCCCTGGGAGCCCCTGGGCACGCCTTCCTCGCCCATaGTCCTCAGCTGTGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VGRPGAWTWVLSPGSPWARLPRP*SSAVSP Trigger: TGGTGACACAGCTGAGGAGCATGGGCGAGGAAGGCG...TGCCCAGGGGCTCCCAGGGGAGAGCACCCAAGTCCATGCTCCAGGTCTGCCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | GGAGATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTTCTGGGCTTGGCGCGTaGGAGAAGTTCTCCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDCPGRAGEWIPWVGASPSGLGA*EKFSLR Trigger: CCTGAGGGAGAACTTCTCCCACGCGCCAAGCCCAGA...AGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAATCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR TCA 90 bp | GTCTCAAAACCACACTCTCTCTGGTTCCACAGCAGTGCTGCCCGTCGGGGTCCTGTGCCGGGACCCCCGTaGGCGAGTCGTACCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSKPHSLWFHSSAARRGPVPGPP*ASRTSG Trigger: TCCACTGGTACGACTCGCTCACGGGGGTCCCGGCAC...AGGACCCCGACGGGCAGCACTGCTGTGGAACCAGAGAGAGTGTGGTTTTGAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR TCA 90 bp | GGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATGACACGACCTGCAGGCTGGGCCAGCTGCAGTTaGTCTGGACAGATGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVLCHVAQGWAAMTRPAGWASCS*SGQMSG Trigger: ACCTGACATCTGTCCAGATCAACTGCAGCTGGCCCA...GCCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR TCA 90 bp | CGTTTCATATGGTGTCCCCACCCTGTCCCTCTGAGTCCGGGTCCTGAGCCCATCGAGCGCCGCAGTGCCTaGGTCACCACAACCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RFIWCPHPVPLSPGPEPIERRSA*VTTTCS Trigger: GCTGCAGGTTGTGGTGACTCAGGCACTGCGGCGCTC...GATGGGCTCAGGACCCGGACTCAGAGGGACAGGGTGGGGACACCATATGAAACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGTAGAATGGGCAACAGGATGGTCTGGAAGCTGGGGAAGCATGAGGGGAAAGGCCAGAGCCCGCTaGTGTGCCGGGACCCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EQVEWATGWSGSWGSMRGKARAR*CAGTPV Trigger: CACGGGGGTCCCGGCACAGCAGCGGGCTCTGGCCTT...TCCCCTCATGCTTCCCCAGCTTCCAGACCATCCTGTTGCCCATTCTACCTGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | GCCATCCTGAGCACACAGGGATACGGGGTGTCCAGCTCAGGGGCAGGTGACACAGCAGAGGGCCATGGCTaGATGATAGTGGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AILSTQGYGVSSSGAGDTAEGHG*MIVGQG Trigger: GCCCTGGCCCACTATCATGCAGCCATGGCCCTCTGC...TGTGTCACCTGCCCCTGAGCTGGACACCCCGTATCCCTGTGTGCTCAGGATGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCAGCTGTGTCACCACCTCCAGGTGCTTCCACCACTTGCACGGCTGCCCGACGTGCTCCTGCCTTaGGAGTTCACCCTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: APQLCHHLQVLPPLARLPDVLLP*EFTLGW Trigger: CCAGCCAAGGGTGAACTCGCAAGGCAGGAGCACGTC...GGGCAGCCGTGCAAGTGGTGGAAGCACCTGGAGGTGGTGACACAGCTGAGGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCCCCAGCTCTGCTGCCCTCTGCAGAGGGAAACTACATCTGGACTACACTGCCCGTCGGGGTCCTGTaGCACGTGGCTCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAPALLPSAEGNYIWTTLPVGVL*HVAQGW Trigger: CCAGCCCTGAGCCACGTGGCACAGGACCCCGACGGG...CAGTGTAGTCCAGATGTAGTTTCCCTCTGCAGAGGGCAGCAGAGCTGGGGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | GGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATGACACGACCTGCAGGCACTCATGTCTGGGCTTaGCGCGTGGGAGAAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVLCHVAQGWAAMTRPAGTHVWA*RVGEVL Trigger: GAGAACTTCTCCCACGCGCCAAGCCCAGACATGAGT...GCCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGCTGCAGCGGGCCCAGGGGCTCATaGGGAGTGGAGGGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FPGPSSGSQNPGGWKSCSGPRGS*GVEGWK Trigger: CTTCCAGCCCTCCACTCCCCATGAGCCCCTGGGCCC...GCTGCAGCTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGCTGCAGCCGCAGCGCCTCCTCCTaGCCCAGGATGGCACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPGPSSGSQNPGGWKSCSRSASS*PRMARF Trigger: GAAGCGTGCCATCCTGGGCCAGGAGGAGGCGCTGCG...GCTGCAGCTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCTTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGGTGCCGGGACCCCCGTaGGCGAGTCGTACCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASLSWAVLRFSESWGLEEVPGPP*ASRTSG Trigger: TCCACTGGTACGACTCGCTCACGGGGGTCCCGGCAC...CTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAAGAGAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | GGAGATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTACTCATGTCTGGGCTTaGCGCGTGGGAGAAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GDCPGRAGEWIPWVGASPTHVWA*RVGEVL Trigger: GAGAACTTCTCCCACGCGCCAAGCCCAGACATGAGT...AGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAATCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGTAGAATGGGCAACAGGATGGTCTGGAAGCTGGGGAAGCATGAGGGGAGGCTCCAGCCAAGGATaGGCCAGGGGCGGGTACGTG | + |
|
Preference number: 4 (lower is better) Translates to: EQVEWATGWSGSWGSMRGGSSQG*ARGGYV Trigger: CACGTACCCGCCCCTGGCCCATCCTTGGCTGGAGCC...TCCCCTCATGCTTCCCCAGCTTCCAGACCATCCTGTTGCCCATTCTACCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | ACCAACTGCCATCGGTTCTTGGTTGAAAACACAGACAAGGGTCCCAGCCGATGGGGCCCGCCTCGTCCCTaGTGGGAGTCCTCGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TNCHRFLVENTDKGPSRWGPPRP*WESSWP Trigger: AGGCCACGAGGACTCCCAGCAGGGACGAGGCGGGCC...CCATCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGTGCTGCCCGTCGGGGTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATGAAGATGCATTCCTGTaGCTGGGCAATCATGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSAARRGPVPRGSGLGSNEDAFL*LGNHEL Trigger: CAGCTCATGATTGCCCAGGCACAGGAATGCATCTTC...ATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGTAGAATGGGCAACAGGATGGTCTGGAAGCTGGGGAAGCATGAGGGGACAGGTGGCTGGGCCATaGCCCGGTGCACAAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EQVEWATGWSGSWGSMRGQVAGP*PGAQAH Trigger: ATGGGCTTGTGCACCGGGCCATGGCCCAGCCACCTG...TCCCCTCATGCTTCCCCAGCTTCCAGACCATCCTGTTGCCCATTCTACCTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCGATGGAAGAAGTCAGTCACCTTCACCTGCGACAGGCTAGGCATCCTCACGTAGTCTCGGACAGGTaGCTGGGCCATGGCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QPMEEVSHLHLRQARHPHVVSDR*LGHGPV Trigger: CACCGGGCCATGGCCCAGCCACCTGTCCGAGACTAC...GTGAGGATGCCTAGCCTGTCGCAGGTGAAGGTGACTGACTTCTTCCATCGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | GAGATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTATTTCGCAGAGGGCCATaGCTGCATGATAGTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EIVPGGQVSGSPGWVPLLFRRGP*LHDSGP Trigger: TGGCCCACTATCATGCAGCCATGGCCCTCTGCGAAA...TAGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAATCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | ATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTATTTTCACCCTTGGCTGGGTaGCTTTCGCAGAGGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IVPGGQVSGSPGWVPLLFSPLAG*LSQRAM Trigger: CATGGCCCTCTGCGAAAGCCACCCAGCCAAGGGTGA...AAATAGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CAA 72 bp | GGGTCAGGGTGGCTTCCAGTCTTGCCTTGTTTATTCTaGCGGCTCCAGCCAAGGATGGGCCAGGGGCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSGWLPVLPCLF*RLQPRMGQGRV Trigger: TACCCGCCCCTGGCCCATCCTTGGCTGGAGCCGCAAGAATAAACAAGGCAAGACTGGAAGCCACCCTGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR TCA 90 bp | ACCAACTGCCATCGGTTCTTGGTTGAAAACACAGACAAGGGTCCCAGCCGATGGTGGAGCCGAGCCCTGTaGCTCTGCAGCTGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TNCHRFLVENTDKGPSRWWSRAL*LCSWPG Trigger: GCCTGGCCAGCTGCAGAGTCACAGGGCTCGGCTCCA...CCATCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAGGTAGAATGGGCAACAGGATGGTCTGGAAGCTGGGGAAGCATGAGGGGAACTCTGCACAAGGTGTaGAGCCGCAGCGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EQVEWATGWSGSWGSMRGTLHKV*SRSASS Trigger: GGAGGAGGCGCTGCGGCTTCACACCTTGTGCAGAGT...TCCCCTCATGCTTCCCCAGCTTCCAGACCATCCTGTTGCCCATTCTACCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCTTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGGGACGACAGCAGCGATaGGGACTGGAGAGTCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLSWAVLRFSESWGLEEGRQQR*GLESLR Trigger: GCGGAGACTCTCCAGTCCTCATCGCTGCTGTCGTCC...CTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAAGAGAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | ACTCTCTCTGGTTCCACAGCAGTGCTGCCCGTCGGGGTCCTGTGCCACGTGGCTTGGGCAATCATGAGCTaGTCCAGCATGGAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSGSTAVLPVGVLCHVAWAIMS*SSMERE Trigger: CTCTCTCTCCATGCTGGAGCAGCTCATGATTGCCCA...AGCCACGTGGCACAGGACCCCGACGGGCAGCACTGCTGTGGAACCAGAGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTGTGCCACGTGGCTCAGGGCTGGGCAGCAATGACACGACCTGCAGGCTCAAAGCCCATATTCAGTTaGCACCTGGGCAGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLCHVAQGWAAMTRPAGSKPIFS*HLGSFL Trigger: CAGGAAGCTGCCCAGGTGGCAACTGAATATGGGCTT...TGAGCCTGCAGGTCGTGTCATTGCTGCCCAGCCCTGAGCCACGTGGCACAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | GTCACCACCTCCAGGTGCTTCCACCACTTGCACGGCTGCCCGTTCACGGACACGATGCATTCCTGTGCCTaGGCAATCATGAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTTSRCFHHLHGCPFTDTMHSCA*AIMSCS Trigger: GGAGCAGCTCATGATTGCCCAGGCACAGGAATGCAT...CGTGTCCGTGAACGGGCAGCCGTGCAAGTGGTGGAAGCACCTGGAGGTGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | GTCACCACCTCCAGGTGCTTCCACCACTTGCACGGCTGCCCGTTCACGGACACGCAGCTGCAGTTGATCTaGACAGATGTCAGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTTSRCFHHLHGCPFTDTQLQLI*TDVRCG Trigger: GCCACACCTGACATCTGTCCAGATCAACTGCAGCTG...CGTGTCCGTGAACGGGCAGCCGTGCAAGTGGTGGAAGCACCTGGAGGTGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | GTGGATCCCCTGGGTGGGTGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGTCTCGGACAGGTGGCTaGGCCATGGCCCGGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VDPLGGCLSYFRRKLRLQSRTGG*AMARCT Trigger: TGTGCACCGGGCCATGGCCCAGCCACCTGTCCGAGA...CTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCACCCACCCAGGGGATCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGGCTGGCCCTGGTAGTCTCGGACAGGTaGCTGGGCCATGGCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISEESCVFRTHSTHRLALVVSDR*LGHGPV Trigger: CACCGGGCCATGGCCCAGCCACCTGTCCGAGACTAC...CAGGGCCAGCCGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | CCCGCTAGGCACATCTGGCTAGTTGGAGCTGATTCCAGGGTGATGTACATAGGAGGGCCCAGGGGCTCATaGGGAGTGGAGGGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PARHIWLVGADSRVMYIGGPRGS*GVEGWK Trigger: CTTCCAGCCCTCCACTCCCCATGAGCCCCTGGGCCC...TCCTATGTACATCACCCTGGAATCAGCTCCAACTAGCCAGATGTGCCTAGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | CGTTTCATATGGTGTCCCCACCCTGTCCCTCTGAGTCCGGGTCCTGAGCCCATCGTGCAGGGGTCAGGGTaGCTTCCAGTCTTGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RFIWCPHPVPLSPGPEPIVQGSG*LPVLPC Trigger: ACAAGGCAAGACTGGAAGCCACCCTGACCCCTGCAC...GATGGGCTCAGGACCCGGACTCAGAGGGACAGGGTGGGGACACCATATGAAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGGGTCCCAGCCGATGGAAGAAGTCAGTCACCTTCACCTGCGACAGGCCTCGGACCCAGGTGTTaGTGGTGGCTCTGTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTRVPADGRSQSPSPATGLGPRC*WWLCRG Trigger: ACCTCTACAGAGCCACCAGCAACACCTGGGTCCGAG...GCCTGTCGCAGGTGAAGGTGACTGACTTCTTCCATCGGCTGGGACCCTTGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGGCTACTAGGAACCAGGCAGAATCAGGGTGGAGCCGTCAGGGTACATGCCTGCTCAGCCTTGACGTaGGCCAGGTTAGTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EGLLGTRQNQGGAVRVHACSALT*ARLVQE Trigger: CTCCTGGACTAACCTGGCGCACGTCAAGGCTGAGCA...GGCATGTACCCTGACGGCTCCACCCTGATTCTGCCTGGTTCCTAGTAGCCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGCGGTCTTCTGGGTGCTaGGGCAGTGTGGGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLSYFRRKLRLQDSLHSPRSSGC*GSVGPR Trigger: CCTGGGCCCCACACTGCCGCAGCACCCAGAAGACCG...CGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | GTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTATTTCAGGCTCCAATCTGCGTGTaGAGTGCCCCAATGTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPGGQVSGSPGWVPLLFQAPICV*SAPMLN Trigger: GTTTAACATTGGGGCACTCCACACGCAGATTGGAGC...CTGAAATAGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCTGGGCCGTCCTCAGGTTCTCAGAATCCTGGGGGTTGGAAGAGCTGCAGCTATTCAGTTGCCACCTaGGCAGCTTCCTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPGPSSGSQNPGGWKSCSYSVAT*AASWAS Trigger: GCTGGCCCAGGAAGCTGCCCAGGTGGCAACTGAATA...GCTGCAGCTCTTCCAACCCCCAGGATTCTGAGAACCTGAGGACGGCCCAGGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGGCTACTAGGAACCAGGCAGAATCAGGGTGGAGCCGTCAGGGTACATGCCTGGGCCAGCTGCAGTTaGTCTGGACAGATGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGLLGTRQNQGGAVRVHAWASCS*SGQMSG Trigger: ACCTGACATCTGTCCAGATCAACTGCAGCTGGCCCA...GGCATGTACCCTGACGGCTCCACCCTGATTCTGCCTGGTTCCTAGTAGCCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGGGAGGCTGGTGACCAGAAGGGCTACTAGGAACCAGGCAGAATCAGGGACCTCTGGGGTCTGGTaGGTCTTGGGTTGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQGRLVTRRATRNQAESGTSGVW*VLGWMS Trigger: AGACATCCAACCCAAGACTCACCAGACCCCAGAGGT...CCCTGATTCTGCCTGGTTCCTAGTAGCCCTTCTGGTCACCAGCCTCCCTTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | ATGCTCCTCAGCTGTGTCACCACCTCCAGGTGCTTCCACCACTTGCACGGCTGCGGGACTGAAGAAACGTaGGTCCAGGAAACAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MLLSCVTTSRCFHHLHGCGTEET*VQETEL Trigger: CAGCTCTGTTTCCTGGACGCACGTTTCTTCAGTCCC...GCAGCCGTGCAAGTGGTGGAAGCACCTGGAGGTGGTGACACAGCTGAGGAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | CATGAATGGGTGACAGCCGCCCCCTGGTGGTTGCAGAGAGCAAGTTCTCCATCTGTGCAGGAGCAATCCTaGCGTGCTCCAATCTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HEWVTAAPWWLQRASSPSVQEQS*RAPICV Trigger: CACGCAGATTGGAGCACGGCAGGATTGCTCCTGCAC...AGATGGAGAACTTGCTCTCTGCAACCACCAGGGGGCGGCTGTCACCCATTCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCGATGGAAGAAGTCAGTCACCTTCACCTGCGACAGGCTAGGCATCCTCACTGCTCAGCCTTGACGTaGGCCAGGTTAGTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPMEEVSHLHLRQARHPHCSALT*ARLVQE Trigger: CTCCTGGACTAACCTGGCGCACGTCAAGGCTGAGCA...GTGAGGATGCCTAGCCTGTCGCAGGTGAAGGTGACTGACTTCTTCCATCGGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTCCTCAGCTGTGTCACCACCTCCAGGTGCTTCCACCACTTGCACGGCTGCGGACCCAGGTGTTGCTaGTGGCTCTGTAGAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MLLSCVTTSRCFHHLHGCGPRCC*WLCRGF Trigger: AAAACCTCTACAGAGCCACCAGCAACACCTGGGTCC...GCAGCCGTGCAAGTGGTGGAAGCACCTGGAGGTGGTGACACAGCTGAGGAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | AACTGCCATCGGTTCTTGGTTGAAAACACAGACAAGGGTCCCAGCCGATGGAAGCAGGTGGCTGGGCCATaGCCCGGTGCACAAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NCHRFLVENTDKGPSRWKQVAGP*PGAQAH Trigger: ATGGGCTTGTGCACCGGGCCATGGCCCAGCCACCTG...CTTCCATCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCTTTGAGGGAGAGCATCTTCATGGCTTCAGCCATGCATAGCTCAGGACTGAGCAGCGATGAGGACTaGAGAGTCTCCGCGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GPLRESIFMASAMHSSGLSSDED*RVSAQR Trigger: ACGCTGCGCGGAGACTCTCCAGTCCTCATCGCTGCT...CAGTCCTGAGCTATGCATGGCTGAAGCCATGAAGATGCTCTCCCTCAAAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CAA 72 bp | TTGAAAGGGCGTGGGTGGGTTGCTGACTATGGCCGCTaGCTTCTCTTTCCTGGGCCGTCCTCAGGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKGRGWVADYGR*LLFPGPSSGSQ Trigger: CTGAGAACCTGAGGACGGCCCAGGAAAGAGAAGCAAGCGGCCATAGTCAGCAACCCACCCACGCCCTTTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CAA 72 bp | GTTGGTGCAGGGGTCAGGGTGGCTTCCAGTCTTGCCTaGTTTATTCTTGCGGCTCCAGCCAAGGATGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGAGVRVASSLA*FILAAPAKDGP Trigger: TGGCCCATCCTTGGCTGGAGCCGCAAGAATAAACAAGGCAAGACTGGAAGCCACCCTGACCCCTGCACCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTGGTTGAAAACACAGACAAGGGTCCCAGCCGATGGAAGAAGTCAGTCACCGAGCGCCGCAGTGCCTaGGTCACCACAACCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLVENTDKGPSRWKKSVTERRSA*VTTTCS Trigger: GCTGCAGGTTGTGGTGACTCAGGCACTGCGGCGCTC...GGTGACTGACTTCTTCCATCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATCCCCTGGGTGGGTGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGCTGGTGCTCAGCTCTaGCAGCTCCTCTTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VDPLGGCLSYFRRKLRLQAGAQL*QLLFQQ Trigger: CTGCTGAAAGAGGAGCTGGCAGAGCTGAGCACCAGC...CTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCACCCACCCAGGGGATCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | ATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTATTTGAAGATGCATTCCTGTaGCTGGGCAATCATGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IVPGGQVSGSPGWVPLLFEDAFL*LGNHEL Trigger: CAGCTCATGATTGCCCAGGCACAGGAATGCATCTTC...AAATAGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGGCTGGCAGAGGGCCATGGCTaGATGATAGTGGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPISEESCVFRTHSTHRLAEGHG*MIVGQG Trigger: GCCCTGGCCCACTATCATGCAGCCATGGCCCTCTGC...CAGCCGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGTAGAATGGGCAACAGGATGGTCTGGAAGCTGGGGAAGCATGAGGGGATCAGTCACCTTCACCTaGGACAGGCTAGGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EQVEWATGWSGSWGSMRGSVTFT*DRLGIL Trigger: GAGGATGCCTAGCCTGTCGCAGGTGAAGGTGACTGA...TCCCCTCATGCTTCCCCAGCTTCCAGACCATCCTGTTGCCCATTCTACCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGTCTCCGCGCAGCGTGAACCCGAAGCTTCCCTCTCCTCGAGTCATGTGGACAGATGTCAGGTGTaGCAGAGGCTGGCAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WRVSAQREPEASLSSSHVDRCQV*QRLAVK Trigger: TTTTACTGCCAGCCTCTGCCACACCTGACATCTGTC...CACATGACTCGAGGAGAGGGAAGCTTCGGGTTCACGCTGCGCGGAGACTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCATTTTTAATAGACATCTCTAAGCAAGGTGGGGGCAGCCTGATAGTCCCCGGGTCCTGTGCCACGTaGCTCAGGGCTGGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PAFLIDISKQGGGSLIVPGSCAT*LRAGQQ Trigger: TTGCTGCCCAGCCCTGAGCCACGTGGCACAGGACCC...GGGGACTATCAGGCTGCCCCCACCTTGCTTAGAGATGTCTATTAAAAATGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR TCA 90 bp | CCAGCATTTTTAATAGACATCTCTAAGCAAGGTGGGGGCAGCCTGATAGTCCCCACTCTGCACAAGGTGTaGAGCCGCAGCGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAFLIDISKQGGGSLIVPTLHKV*SRSASS Trigger: GGAGGAGGCGCTGCGGCTTCACACCTTGTGCAGAGT...GGGGACTATCAGGCTGCCCCCACCTTGCTTAGAGATGTCTATTAAAAATGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | CCCGCTAGGCACATCTGGCTAGTTGGAGCTGATTCCAGGGTGATGTACATAGGAGCTGGTGCTCAGCTCTaGCAGCTCCTCTTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PARHIWLVGADSRVMYIGAGAQL*QLLFQQ Trigger: CTGCTGAAAGAGGAGCTGGCAGAGCTGAGCACCAGC...TCCTATGTACATCACCCTGGAATCAGCTCCAACTAGCCAGATGTGCCTAGCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGGACGTGCTCCTGCCTTaGGAGTTCACCCTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLSYFRRKLRLQDSLHSPDVLLP*EFTLGW Trigger: CCAGCCAAGGGTGAACTCGCAAGGCAGGAGCACGTC...CGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGCCTTGGCAAGCTTCCTaGGGTCTTCTGGGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CLSYFRRKLRLQDSLHSPPWQAS*GLLGAA Trigger: CGCAGCACCCAGAAGACCGCAGGAAGCTTGCCAAGG...CGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | CCCGCTAGGCACATCTGGCTAGTTGGAGCTGATTCCAGGGTGATGTACATAGGACACAGTTCCTGTTGGTaGAGGGGTCAGGGTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PARHIWLVGADSRVMYIGHSSCW*RGQGGF Trigger: GAAGCCACCCTGACCCCTGCACCAACAGGAACTGTG...TCCTATGTACATCACCCTGGAATCAGCTCCAACTAGCCAGATGTGCCTAGCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | ATCGGTGTCTCAAAACCACACTCTCTCTGGTTCCACAGCAGTGCTGCCCGTCGGCCCAGGTGTTGCTGGTaGCTCTGTAGAGGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IGVSKPHSLWFHSSAARRPRCCW*LCRGFQ Trigger: CTGAAAACCTCTACAGAGCCACCAGCAACACCTGGG...CCGACGGGCAGCACTGCTGTGGAACCAGAGAGAGTGTGGTTTTGAGACACCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGTAGAATGGGCAACAGGATGGTCTGGAAGCTGGGGAAGCATGAGGGGAGGACCCAGGTGTTGCTaGTGGCTCTGTAGAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EQVEWATGWSGSWGSMRGGPRCC*WLCRGF Trigger: AAAACCTCTACAGAGCCACCAGCAACACCTGGGTCC...TCCCCTCATGCTTCCCCAGCTTCCAGACCATCCTGTTGCCCATTCTACCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGCCCTCTGCAGAGGGAAACTACATCTGGACTACACTGAGACATCTCTCGCTCCTTCAGCGGTGTaGCCCAGTCCAACTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAALCRGKLHLDYTETSLAPSAV*PSPTPW Trigger: CCAAGGAGTTGGACTGGGCCACACCGCTGAAGGAGC...GAGAGATGTCTCAGTGTAGTCCAGATGTAGTTTCCCTCTGCAGAGGGCAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | GCTAGGCACATCTGGCTAGTTGGAGCTGATTCCAGGGTGATGTACATAGGAGTAGGGGCTCATGGGGAGTaGAGGGCTGGAAGACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARHIWLVGADSRVMYIGVGAHGE*RAGRRA Trigger: AGCACGTCTTCCAGCCCTCCACTCCCCATGAGCCCC...TACTCCTATGTACATCACCCTGGAATCAGCTCCAACTAGCCAGATGTGCCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGTGGGTGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCATGGCACGCTTCAGGTaGGCCTTGGCAAGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGGCLSYFRRKLRLQDSLMARFR*ALASFL Trigger: CAGGAAGCTTGCCAAGGCCCACCTGAAGCGTGCCAT...GAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCACCCACCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CAA 72 bp | TGTGCACCGGCCCTACCAACTGCCATCGGTTCTTGGTaGAAAACACAGACAAGGGTCCCAGCCGATGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CAPALPTAIGSW*KTQTRVPADGR Trigger: TCTTCCATCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGTAGGGCCGGTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| 3UTR CAA 72 bp | TTCCTGTTGGTGCAGGGGTCAGGGTGGCTTCCAGTCTaGCCTTGTTTATTCTTGCGGCTCCAGCCAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FLLVQGSGWLPV*PCLFLRLQPRM Trigger: CATCCTTGGCTGGAGCCGCAAGAATAAACAAGGCAAGACTGGAAGCCACCCTGACCCCTGCACCAACAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCTGCCCTCTGCAGAGGGAAACTACATCTGGACTACACTGAGACATCTCTCCTCGGACCCAGGTGTTaGTGGTGGCTCTGTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SAALCRGKLHLDYTETSLLGPRC*WWLCRG Trigger: ACCTCTACAGAGCCACCAGCAACACCTGGGTCCGAG...GAGAGATGTCTCAGTGTAGTCCAGATGTAGTTTCCCTCTGCAGAGGGCAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | CATGAATGGGTGACAGCCGCCCCCTGGTGGTTGCAGAGAGCAAGTTCTCCATCTTGCCTTGTTTATTCTTaGGGCTCCAGCCAAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HEWVTAAPWWLQRASSPSCLVYS*GSSQGW Trigger: CCATCCTTGGCTGGAGCCGCAAGAATAAACAAGGCA...AGATGGAGAACTTGCTCTCTGCAACCACCAGGGGGCGGCTGTCACCCATTCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGGCTGGCCCTGCCCAGGTGTTGCTGGTaGCTCTGTAGAGGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISEESCVFRTHSTHRLALPRCCW*LCRGFQ Trigger: CTGAAAACCTCTACAGAGCCACCAGCAACACCTGGG...CAGGGCCAGCCGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | ACCAACTGCCATCGGTTCTTGGTTGAAAACACAGACAAGGGTCCCAGCCGATGGTTTCGCAGAGGGCCATaGCTGCATGATAGTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNCHRFLVENTDKGPSRWFRRGP*LHDSGP Trigger: TGGCCCACTATCATGCAGCCATGGCCCTCTGCGAAA...CCATCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTGGTTGAAAACACAGACAAGGGTCCCAGCCGATGGAAGAAGTCAGTCACCTCACCCTTGGCTGGGTaGCTTTCGCAGAGGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FLVENTDKGPSRWKKSVTSPLAG*LSQRAM Trigger: CATGGCCCTCTGCGAAAGCCACCCAGCCAAGGGTGA...GGTGACTGACTTCTTCCATCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | GTGGATCCCCTGGGTGGGTGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGCCATCCTCTCCAAAGTaGTCAGAGATCAGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VDPLGGCLSYFRRKLRLQPSSPK*SEISSF Trigger: GAAGGAGCTGATCTCTGAGCACTTTGGAGAGGATGG...CTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCACCCACCCAGGGGATCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | GCTAGGCACATCTGGCTAGTTGGAGCTGATTCCAGGGTGATGTACATAGGAGTAGTGCAGGAGCAATCCTaGCGTGCTCCAATCTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARHIWLVGADSRVMYIGVVQEQS*RAPICV Trigger: CACGCAGATTGGAGCACGGCAGGATTGCTCCTGCAC...TACTCCTATGTACATCACCCTGGAATCAGCTCCAACTAGCCAGATGTGCCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| 3UTR CAA 72 bp | AGCCTTTCTGTTTCCATGCGGAACCTTCCAGGGCCTTaGAGGGAGAGCATCTTCATGGCTTCAGCCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSVSMRNLPGP*RESIFMASAMH Trigger: ATGCATGGCTGAAGCCATGAAGATGCTCTCCCTCAAAGGCCCTGGAAGGTTCCGCATGGAAACAGAAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| 3UTR CAA 72 bp | GGGCTGCATGAATGGGTGACAGCCGCCCCCTGGTGGTaGCAGAGAGCAAGTTCTCCATCTAATTTGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLHEWVTAAPWW*QRASSPSNLFC Trigger: ACAAAACAAATTAGATGGAGAACTTGCTCTCTGCAACCACCAGGGGGCGGCTGTCACCCATTCATGCAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGTGGGCAATCATGAGCTaGTCCAGCATGGAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLSYFRRKLRLQDSLHSPWAIMS*SSMERE Trigger: CTCTCTCTCCATGCTGGAGCAGCTCATGATTGCCCA...CGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | GCTAGGCACATCTGGCTAGTTGGAGCTGATTCCAGGGTGATGTACATAGGAGTAATGCATTCCTGTGCCTaGGCAATCATGAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARHIWLVGADSRVMYIGVMHSCA*AIMSCS Trigger: GGAGCAGCTCATGATTGCCCAGGCACAGGAATGCAT...TACTCCTATGTACATCACCCTGGAATCAGCTCCAACTAGCCAGATGTGCCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGCCCTCTGCAGAGGGAAACTACATCTGGACTACACTGAGACATCTCTCGACAGATGTCAGGTGTaGCAGAGGCTGGCAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAALCRGKLHLDYTETSLDRCQV*QRLAVK Trigger: TTTTACTGCCAGCCTCTGCCACACCTGACATCTGTC...GAGAGATGTCTCAGTGTAGTCCAGATGTAGTTTCCCTCTGCAGAGGGCAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCATTTTTAATAGACATCTCTAAGCAAGGTGGGGGCAGCCTGATAGTCCCCCAGCTGCAGTTGATCTaGACAGATGTCAGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PAFLIDISKQGGGSLIVPQLQLI*TDVRCG Trigger: GCCACACCTGACATCTGTCCAGATCAACTGCAGCTG...GGGGACTATCAGGCTGCCCCCACCTTGCTTAGAGATGTCTATTAAAAATGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCTTTGAGGGAGAGCATCTTCATGGCTTCAGCCATGCATAGCTCAGGACTGACTGCCATCGGTTCTTaGTTGAAAACACAGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPLRESIFMASAMHSSGLTAIGS*LKTQTR Trigger: CCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGT...CAGTCCTGAGCTATGCATGGCTGAAGCCATGAAGATGCTCTCCCTCAAAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | AGCATGAGGGGACTGGAGATAAAAATGTCTTTGCTGAGATCTTACACACGGAAGCCTTGCGCAGGACTCTaGACAAGGTGTGAAGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SMRGLEIKMSLLRSYTRKPCAGL*TRCEAA Trigger: TGCGGCTTCACACCTTGTGCAGAGTCCTGCGCAAGG...CTTCCGTGTGTAAGATCTCAGCAAAGACATTTTTATCTCCAGTCCCCTCATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | ACCAACTGCCATCGGTTCTTGGTTGAAAACACAGACAAGGGTCCCAGCCGATGGAGGTCTTCTAGTTCCTaGATCTCTGTCTCAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TNCHRFLVENTDKGPSRWRSSSS*ISVSKE Trigger: CTCCTTTGAGACAGAGATCCAGGAACTAGAAGACCT...CCATCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCATTTTTAATAGACATCTCTAAGCAAGGTGGGGGCAGCCTGATAGTCCCCGCTCCAATCTGCGTGTaGAGTGCCCCAATGTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PAFLIDISKQGGGSLIVPAPICV*SAPMLN Trigger: GTTTAACATTGGGGCACTCCACACGCAGATTGGAGC...GGGGACTATCAGGCTGCCCCCACCTTGCTTAGAGATGTCTATTAAAAATGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS-3UTR GCA 90 bp | ACCGAAGCTTCAGTACCCGACTCAGACTCACCTCATCTGACCAGCATTTTTAATGGGACTGAAGAAACGTaGGTCCAGGAAACAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEASVPDSDSPHLTSIFNGTEET*VQETEL Trigger: CAGCTCTGTTTCCTGGACGCACGTTTCTTCAGTCCC...ATTAAAAATGCTGGTCAGATGAGGTGAGTCTGAGTCGGGTACTGAAGCTTCGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGATAAAAATGTCTTTGCTGAGATCTTACACACGGAAGAGCTGACTAACAGGCATCCTCACCTCTaGGGTCTGGTGAGTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGDKNVFAEILHTEELTNRHPHL*GLVSLG Trigger: CCCAAGACTCACCAGACCCCAGAGGTGAGGATGCCT...GTTAGTCAGCTCTTCCGTGTGTAAGATCTCAGCAAAGACATTTTTATCTCCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR GCA 90 bp | ACTGGAGATAAAAATGTCTTTGCTGAGATCTTACACACGGAAGAGCTGACTAACAAGCCCATATTCAGTTaGCACCTGGGCAGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGDKNVFAEILHTEELTNKPIFS*HLGSFL Trigger: CAGGAAGCTGCCCAGGTGGCAACTGAATATGGGCTT...GTTAGTCAGCTCTTCCGTGTGTAAGATCTCAGCAAAGACATTTTTATCTCCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGATAAAAATGTCTTTGCTGAGATCTTACACACGGAAGAGCTGACTAACAGGTCTTCTAGTTCCTaGATCTCTGTCTCAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGDKNVFAEILHTEELTNRSSSS*ISVSKE Trigger: CTCCTTTGAGACAGAGATCCAGGAACTAGAAGACCT...GTTAGTCAGCTCTTCCGTGTGTAAGATCTCAGCAAAGACATTTTTATCTCCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS CCA 90 bp | AGAGCCCGCTGCTGTGCCGGGACCCCCGTGAGCGAGTCGTACCAGTaGAAGAGCAGCCCGGGGCTCCTGGAGGGACTGAAGAAACGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RARCCAGTPVSESYQ*KSSPGLLEGLKKRA Trigger: CGCACGTTTCTTCAGTCCCTCCAGGAGCCCCGGGCTGCTCTTCCACTGGTACGACTCGCTCACGGGGGTCCCGGCACAGCAGCGGGCTCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS GCA 90 bp | CAGGGGCTCATGGGGAGTGGAGGGCTGGAAGACGTGCTCCTGCCTTaGGAGTTCACCCTTGGCTGGGTGGCTTTCGCAGAGGGCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QGLMGSGGLEDVLLP*EFTLGWVAFAEGHG Trigger: GCCATGGCCCTCTGCGAAAGCCACCCAGCCAAGGGTGAACTCGCAAGGCAGGAGCACGTCTTCCAGCCCTCCACTCCCCATGAGCCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS CCA 90 bp | AGCGGACTCAGCCTGACCCCCAGGGACGACAGCAGCGATGAGGACTaGAGAGTCTCCGCGCAGCGTGAACCCGAAGCTTCCCTCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SGLSLTPRDDSSDED*RVSAQREPEASLSS Trigger: CGAGGAGAGGGAAGCTTCGGGTTCACGCTGCGCGGAGACTCTCCAGTCCTCATCGCTGCTGTCGTCCCTGGGGGTCAGGCTGAGTCCGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 |
||
| CDS TCA 90 bp | TCGCGCTCGAGCTGTGAGTACTTGGCCAGGGAGCGCCGCAGTGCCTaGGTCACCACAACCTGCAGCAGGTCCACCTTGCGCAGGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSCEYLARERRSA*VTTTCSRSTLRRTL Trigger: CAGAGTCCTGCGCAAGGTGGACCTGCTGCAGGTTGTGGTGACTCAGGCACTGCGGCGCTCCCTGGCCAAGTACTCACAGCTCGAGCGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS GCA 90 bp | CAGCAGCCCTCTGGAAAGCCTCAGCAGCGTGGTTGGTGCCCTCGGTaGAGGAGCAATCCTGCCGTGCTCCAATCTGCGTGTGGAGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QQPSGKPQQRGWCPR*RSNPAVLQSACGVP Trigger: GGGCACTCCACACGCAGATTGGAGCACGGCAGGATTGCTCCTGCACCGAGGGCACCAACCACGCTGCTGAGGCTTTCCAGAGGGCTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 90 bp | CCTGAGTCACCACAACCTGCAGCAGGTCCACCTTGCGCAGGACTCTaGACAAGGTGTGAAGCCGCAGCGCCTCCTCCTGGCCCAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: PESPQPAAGPPCAGL*TRCEAAAPPPGPGW Trigger: CCATCCTGGGCCAGGAGGAGGCGCTGCGGCTTCACACCTTGTGCAGAGTCCTGCGCAAGGTGGACCTGCTGCAGGTTGTGGTGACTCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 |
||
| CDS CCA 90 bp | CTCTGCACAAGGTGTGAAGCCGCAGCGCCTCCTCCTGGCCCAGGATaGCACGCTTCAGGTGGGCCTTGGCAAGCTTCCTGCGGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCTRCEAAAPPPGPG*HASGGPWQASCGLL Trigger: CAGAAGACCGCAGGAAGCTTGCCAAGGCCCACCTGAAGCGTGCCATCCTGGGCCAGGAGGAGGCGCTGCGGCTTCACACCTTGTGCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 |
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| CDS TCA 90 bp | TGGGGCCTCCGTAGCCTCGAAGAAGTCATCCTCGCGCTCGAGCTGTaGGTACTTGGCCAGGGAGCGCCGCAGTGCCTGAGTCACCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: WGLRSLEEVILALEL*VLGQGAPQCLSHHN Trigger: GTTGTGGTGACTCAGGCACTGCGGCGCTCCCTGGCCAAGTACTCACAGCTCGAGCGCGAGGATGACTTCTTCGAGGCTACGGAGGCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 |
||
| CDS GCA 90 bp | GTTAAACAGTACACTGCCCTTCTCGAAGGCCAGAGCCCGCTGCTGTaGCGGGACCCCCGTGAGCGAGTCGTACCAGTGGAAGAGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VKQYTALLEGQSPLL*RDPRERVVPVEEQP Trigger: GGGCTGCTCTTCCACTGGTACGACTCGCTCACGGGGGTCCCGGCACAGCAGCGGGCTCTGGCCTTCGAGAAGGGCAGTGTACTGTTTAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 90 bp | CCTGAGTCACCACAACCTGCAGCAGGTCCACCTTGCGCAGGACTCTaGACAAGGTGTGAAGCCGCAGCGCCTCCTCCAAGCTTCCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PESPQPAAGPPCAGL*TRCEAAAPPPSFLR Trigger: CCGCAGGAAGCTTGGAGGAGGCGCTGCGGCTTCACACCTTGTGCAGAGTCCTGCGCAAGGTGGACCTGCTGCAGGTTGTGGTGACTCAGG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS CCA 90 bp | GTGCGCCAGGTTAGTCCAGGAGGCAGGCAGGTAGTCTCGGACAGGTaGCTGGGCCATGGCCCGGTGCACAAGCCCATATTCAGTTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VRQVSPGGRQVVSDR*LGHGPVHKPIFSCH Trigger: GTGGCAACTGAATATGGGCTTGTGCACCGGGCCATGGCCCAGCCACCTGTCCGAGACTACCTGCCTGCCTCCTGGACTAACCTGGCGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS-3UTR CAA 90 bp | GGAGATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTCACTCATGTCTGGGCTaGGCGCGTGGGAGAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GDCPGRAGEWIPWVGASPHSCLG*ARGRSS Trigger: AGAACTTCTCCCACGCGCCAAGCCCAGACATGAGTG...AGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAATCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| CDS GCA 90 bp | TGCGAGTTCACCCTTGGCTGGGTGGCTTTCGCAGAGGGCCATGGCTaGATGATAGTGGGCCAGGGCGCAGAAGTGCTCAGCCTTGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: CEFTLGWVAFAEGHG*MIVGQGAEVLSLDV Trigger: CACGTCAAGGCTGAGCACTTCTGCGCCCTGGCCCACTATCATGCAGCCATGGCCCTCTGCGAAAGCCACCCAGCCAAGGGTGAACTCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 90 bp | TCCAGCATGGAGAGAGAGGCAGCACTCATGTCTGGGCTTGGCGCGTaGGAGAAGTTCTCCCTCAGGAGTCTGAAGGCCCCAGCAGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSMEREAALMSGLGA*EKFSLRSLKAPAAL Trigger: GAGGGCTGCTGGGGCCTTCAGACTCCTGAGGGAGAACTTCTCCCACGCGCCAAGCCCAGACATGAGTGCTGCCTCTCTCTCCATGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 90 bp | GAGCTGCTCCAGCATGGAGAGAGAGGCAGCACTCATGTCTGGGCTTaGCGCGTGGGAGAAGTTCTCCCTCAGGAGTCTGAAGGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ELLQHGERGSTHVWA*RVGEVLPQESEGPS Trigger: GCTGGGGCCTTCAGACTCCTGAGGGAGAACTTCTCCCACGCGCCAAGCCCAGACATGAGTGCTGCCTCTCTCTCCATGCTGGAGCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 90 bp | GAGTGGAGGGCTGGAAGACGTGCTCCTGCCTTGCGAGTTCACCCTTaGCTGGGTGGCTTTCGCAGAGGGCCATGGCTGCATGATAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EWRAGRRAPALRVHP*LGGFRRGPWLHDSG Trigger: CCCACTATCATGCAGCCATGGCCCTCTGCGAAAGCCACCCAGCCAAGGGTGAACTCGCAAGGCAGGAGCACGTCTTCCAGCCCTCCACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 90 bp | CCAATGTTAAACAGTACACTGCCCTTCTCGAAGGCCAGAGCCCGCTaGTGTGCCGGGACCCCCGTGAGCGAGTCGTACCAGTGGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PMLNSTLPFSKARAR*CAGTPVSESYQWKS Trigger: GCTCTTCCACTGGTACGACTCGCTCACGGGGGTCCCGGCACAGCAGCGGGCTCTGGCCTTCGAGAAGGGCAGTGTACTGTTTAACATTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 90 bp | AGACAAGGGTCCCTCTGGGGTCTGGTGAGTCTTGGGTTGGATGTCTaGGGCCTCCGTAGCCTCGAAGAAGTCATCCTCGCGCTCGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RQGSLWGLVSLGLDV*GLRSLEEVILALEL Trigger: CAGCTCGAGCGCGAGGATGACTTCTTCGAGGCTACGGAGGCCCCAGACATCCAACCCAAGACTCACCAGACCCCAGAGGGACCCTTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023244.6 |
||
| CDS CCA 90 bp | AGGCATCCTCACCTCTGGGGTCTGGTGAGTCTTGGGTTGGATGTCTaGGGCCTCCGTAGCCTCGAAGAAGTCATCCTCGCGCTCGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RHPHLWGLVSLGLDV*GLRSLEEVILALEL Trigger: CAGCTCGAGCGCGAGGATGACTTCTTCGAGGCTACGGAGGCCCCAGACATCCAACCCAAGACTCACCAGACCCCAGAGGTGAGGATGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| CDS TCA 90 bp | GCGAGTCGTACCAGTGGAAGAGCAGCCCGGGGCTCCTGGAGGGACTaGAGAAACGTGCGTCCAGGAAACAGAGCTGGCTATAGTAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASRTSGRAARGSWRD*RNVRPGNRAGYSRL Trigger: CAGCCTACTATAGCCAGCTCTGTTTCCTGGACGCACGTTTCTTCAGTCCCTCCAGGAGCCCCGGGCTGCTCTTCCACTGGTACGACTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 90 bp | CCCTTCGCCCTCTGGCTGGTCCACATCTACGCTGGTGCTCAGCTCTaGCAGCTCCTCTTTCAGCAGCTGCAGGTTGGAGTTGACGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PFALWLVHIYAGAQL*QLLFQQLQVGVDVA Trigger: AGCTACGTCAACTCCAACCTGCAGCTGCTGAAAGAGGAGCTGGCAGAGCTGAGCACCAGCGTAGATGTGGACCAGCCAGAGGGCGAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 90 bp | CTTCAGCCCCAGGGGGATCATGGGAATAGTAATCCCTTCGCCCTCTaGCTGGTCCACATCTACGCTGGTGCTCAGCTCTGCCAGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQPQGDHGNSNPFAL*LVHIYAGAQLCQLL Trigger: GAGGAGCTGGCAGAGCTGAGCACCAGCGTAGATGTGGACCAGCCAGAGGGCGAAGGGATTACTATTCCCATGATCCCCCTGGGGCTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 90 bp | GTGCCCTCGGTGCAGGAGCAATCCTGCCGTGCTCCAATCTGCGTGTaGAGTGCCCCAATGTTAAACAGTACACTGCCCTTCTCGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPSVQEQSCRAPICV*SAPMLNSTLPFSKA Trigger: GGCCTTCGAGAAGGGCAGTGTACTGTTTAACATTGGGGCACTCCACACGCAGATTGGAGCACGGCAGGATTGCTCCTGCACCGAGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS GCA 90 bp | CTCGGTGCAGGAGCAATCCTGCCGTGCTCCAATCTGCGTGTGGAGTaGCCCAATGTTAAACAGTACACTGCCCTTCTCGAAGGCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGAGAILPCSNLRVE*PNVKQYTALLEGQS Trigger: GCTCTGGCCTTCGAGAAGGGCAGTGTACTGTTTAACATTGGGGCACTCCACACGCAGATTGGAGCACGGCAGGATTGCTCCTGCACCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 90 bp | TGGTTGGTGCCCTCGGTGCAGGAGCAATCCTGCCGTGCTCCAATCTaGGTGTGGAGTGCCCCAATGTTAAACAGTACACTGCCCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: WLVPSVQEQSCRAPI*VWSAPMLNSTLPFS Trigger: CGAGAAGGGCAGTGTACTGTTTAACATTGGGGCACTCCACACGCAGATTGGAGCACGGCAGGATTGCTCCTGCACCGAGGGCACCAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 90 bp | CTCAGCAGCGTGGTTGGTGCCCTCGGTGCAGGAGCAATCCTGCCGTaGTCCAATCTGCGTGTGGAGTGCCCCAATGTTAAACAGTACACT | + |
|
Preference number: 5 (lower is better) Translates to: LSSVVGALGAGAILP*SNLRVECPNVKQYT Trigger: AGTGTACTGTTTAACATTGGGGCACTCCACACGCAGATTGGAGCACGGCAGGATTGCTCCTGCACCGAGGGCACCAACCACGCTGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS GCA 90 bp | AAAGCCTCAGCAGCGTGGTTGGTGCCCTCGGTGCAGGAGCAATCCTaGCGTGCTCCAATCTGCGTGTGGAGTGCCCCAATGTTAAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: KASAAWLVPSVQEQS*RAPICVWSAPMLNS Trigger: ACTGTTTAACATTGGGGCACTCCACACGCAGATTGGAGCACGGCAGGATTGCTCCTGCACCGAGGGCACCAACCACGCTGCTGAGGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS GCA 90 bp | CCGAAGCTTCCCTCTCCTCGAGTCATGTGCACCGGCCCTACCAACTaGCATCGGTTCTTGGTTGAAAACACAGACAAGGGTCCCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PKLPSPRVMCTGPTN*HRFLVENTDKGPSG Trigger: CCCAGAGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGTAGGGCCGGTGCACATGACTCGAGGAGAGGGAAGCTTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023244.6 |
||
| CDS CCA 90 bp | AATCATGAGCTGCTCCAGCATGGAGAGAGAGGCAGCACTCATGTCTaGGCTTGGCGCGTGGGAGAAGTTCTCCCTCAGGAGTCTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NHELLQHGERGSTHV*AWRVGEVLPQESEG Trigger: GCCTTCAGACTCCTGAGGGAGAACTTCTCCCACGCGCCAAGCCCAGACATGAGTGCTGCCTCTCTCTCCATGCTGGAGCAGCTCATGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCCCGGGAGGGCAGGTGAGTGGATCCCCTGGGTGGGTGCCTCTCCTATTTGGCAGTAAAAGGCCCTaGAAGATGCATTCCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IVPGGQVSGSPGWVPLLFGSKRP*KMHSCA Trigger: GGCACAGGAATGCATCTTCAAGGGCCTTTTACTGCC...AAATAGGAGAGGCACCCACCCAGGGGATCCACTCACCTGCCCTCCCGGGACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CAA 90 bp | GTGGATCCCCTGGGTGGGTGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGCTGGTGAGTCTTGGGTaGGATGTCTGGGGCCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VDPLGGCLSYFRRKLRLQLVSLG*DVWGLR Trigger: ACGGAGGCCCCAGACATCCAACCCAAGACTCACCAG...CTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCACCCACCCAGGGGATCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS CCA 90 bp | GCAGAGGCTGGCAGTAAAAGGCCCTTGAAGATGCATTCCTGTGCCTaGGCAATCATGAGCTGCTCCAGCATGGAGAGAGAGGCAGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: AEAGSKRPLKMHSCA*AIMSCSSMEREAAL Trigger: GAGTGCTGCCTCTCTCTCCATGCTGGAGCAGCTCATGATTGCCCAGGCACAGGAATGCATCTTCAAGGGCCTTTTACTGCCAGCCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS CCA 90 bp | CTCCTCGAGTCATGTGCACCGGCCCTACCAACTGCCATCGGTTCTTaGTTGAAAACACAGACAAGGGTCCCTCTGGGGTCTGGTGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLESCAPALPTAIGS*LKTQTRVPLGSGES Trigger: AGACTCACCAGACCCCAGAGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGTAGGGCCGGTGCACATGACTCGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023244.6 |
||
| CDS GCA 90 bp | AAAAGGCCCTTGAAGATGCATTCCTGTGCCTGGGCAATCATGAGCTaGTCCAGCATGGAGAGAGAGGCAGCACTCATGTCTGGGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRPLKMHSCAWAIMS*SSMEREAALMSGLG Trigger: GCCAAGCCCAGACATGAGTGCTGCCTCTCTCTCCATGCTGGAGCAGCTCATGATTGCCCAGGCACAGGAATGCATCTTCAAGGGCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 90 bp | TCCCTGCTGGGAGTCCTCGTGGCCTGCCGTAGGTCTTCTAGTTCCTaGATCTCTGTCTCAAAGGAGGTACCATCCTCTCCAAAGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLGVLVACRRSSSS*ISVSKEVPSSPKCS Trigger: TGAGCACTTTGGAGAGGATGGTACCTCCTTTGAGACAGAGATCCAGGAACTAGAAGACCTACGGCAGGCCACGAGGACTCCCAGCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS-3UTR CAA 90 bp | TGCCTCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGTGCAGCAGGTCCACCTaGCGCAGGACTCTGCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLSYFRRKLRLQDSLHSPCSRST*RRTLHK Trigger: CTTGTGCAGAGTCCTGCGCAAGGTGGACCTGCTGCA...CGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| CDS-3UTR CAA 90 bp | GAAGGGCTACTAGGAACCAGGCAGAATCAGGGTGGAGCCGTCAGGGTACATGCCGCTTCCAGTCTTGCCTaGTTTATTCTTGCGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EGLLGTRQNQGGAVRVHAASSLA*FILAAP Trigger: TGGAGCCGCAAGAATAAACAAGGCAAGACTGGAAGC...GGCATGTACCCTGACGGCTCCACCCTGATTCTGCCTGGTTCCTAGTAGCCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| CDS-3UTR CAA 90 bp | AACTGCCATCGGTTCTTGGTTGAAAACACAGACAAGGGTCCCAGCCGATGGAAGCACTCATGTCTGGGCTaGGCGCGTGGGAGAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NCHRFLVENTDKGPSRWKHSCLG*ARGRSS Trigger: AGAACTTCTCCCACGCGCCAAGCCCAGACATGAGTG...CTTCCATCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CAA 90 bp | CCTACCAACTGCCATCGGTTCTTGGTTGAAAACACAGACAAGGGTCCCAGCCGAGGCAGTAAAAGGCCCTaGAAGATGCATTCCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTNCHRFLVENTDKGPSRGSKRP*KMHSCA Trigger: GGCACAGGAATGCATCTTCAAGGGCCTTTTACTGCC...TCGGCTGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGGCTGGCCATCGGTTCTTGGTaGAAAACACAGACAAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPISEESCVFRTHSTHRLAIGSW*KTQTRV Trigger: GACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGC...CAGCCGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
||
| CDS-3UTR CAA 90 bp | TCTCCTATTTCAGAAGAAAGCTGCGTCTTCAGGACTCACTCCACTCACCGGCTGAACTGCCATCGGTTCTaGGTTGAAAACACAGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPISEESCVFRTHSTHRLNCHRF*VENTDK Trigger: CTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTT...CAGCCGGTGAGTGGAGTGAGTCCTGAAGACGCAGCTTTCTTCTGAAATAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| CDS CCA 72 bp | TGCTGTGCCGGGACCCCCGTGAGCGAGTCGTACCAGTaGAAGAGCAGCCCGGGGCTCCTGGAGGGACTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CCAGTPVSESYQ*KSSPGLLEGLK Trigger: CTTCAGTCCCTCCAGGAGCCCCGGGCTGCTCTTCCACTGGTACGACTCGCTCACGGGGGTCCCGGCACAGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 72 bp | TCTGGGTGCTGCGGCAGTGTGGGGCCCAGGGGCTCATaGGGAGTGGAGGGCTGGAAGACGTGCTCCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SGCCGSVGPRGS*GVEGWKTCSCL Trigger: AAGGCAGGAGCACGTCTTCCAGCCCTCCACTCCCCATGAGCCCCTGGGCCCCACACTGCCGCAGCACCCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 72 bp | CCCAGGGGCTCATGGGGAGTGGAGGGCTGGAAGACGTaGTCCTGCCTTGCGAGTTCACCCTTGGCTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRGSWGVEGWKT*SCLASSPLAGW Trigger: CCACCCAGCCAAGGGTGAACTCGCAAGGCAGGAGCACGTCTTCCAGCCCTCCACTCCCCATGAGCCCCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS GCA 72 bp | CAAGGTGTGAAGCCGCAGCGCCTCCTCCAAGCTTCCTaGGGTCTTCTGGGTGCTGCGGCAGTGTGGGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QGVKPQRLLQAS*GLLGAAAVWGP Trigger: TGGGCCCCACACTGCCGCAGCACCCAGAAGACCGCAGGAAGCTTGGAGGAGGCGCTGCGGCTTCACACCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
||
| CDS CCA 72 bp | CTTCAGGTGGGCCTTGGCAAGCTTCCTGCGGTCTTCTaGGTGCTGCGGCAGTGTGGGGCCCAGGGGCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LQVGLGKLPAVF*VLRQCGAQGLM Trigger: CATGAGCCCCTGGGCCCCACACTGCCGCAGCACCCAGAAGACCGCAGGAAGCTTGCCAAGGCCCACCTGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 |
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| CDS CCA 72 bp | CCTCCTGGCCCAGGATGGCACGCTTCAGGTGGGCCTTaGCAAGCTTCCTGCGGTCTTCTGGGTGCTGCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PPGPGWHASGGP*QASCGLLGAAA Trigger: TGCCGCAGCACCCAGAAGACCGCAGGAAGCTTGCCAAGGCCCACCTGAAGCGTGCCATCCTGGGCCAGGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 |
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| CDS CAA 72 bp | TCCTCCTGGCCCAGGATGGCACGCTTCAGGTGGGCCTaGGCAAGCTTCCTGCGGTCTTCTGGGTGCTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSWPRMARFRWA*ASFLRSSGCCG Trigger: GCCGCAGCACCCAGAAGACCGCAGGAAGCTTGCCAAGGCCCACCTGAAGCGTGCCATCCTGGGCCAGGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 |
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| CDS CAA 90 bp | CCAGGGGCTCATGGGGAGTGGAGGGCTGGAAGACGTGCTCCTGCCTaGCGAGTTCACCCTTGGCTGGGTGGCTTTCGCAGAGGGCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: PGAHGEWRAGRRAPA*RVHPWLGGFRRGPW Trigger: CCATGGCCCTCTGCGAAAGCCACCCAGCCAAGGGTGAACTCGCAAGGCAGGAGCACGTCTTCCAGCCCTCCACTCCCCATGAGCCCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 72 bp | TACACTGCCCTTCTCGAAGGCCAGAGCCCGCTGCTGTaGCGGGACCCCCGTGAGCGAGTCGTACCAGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: YTALLEGQSPLL*RDPRERVVPVE Trigger: TTCCACTGGTACGACTCGCTCACGGGGGTCCCGGCACAGCAGCGGGCTCTGGCCTTCGAGAAGGGCAGTGTA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 72 bp | AACAGTACACTGCCCTTCTCGAAGGCCAGAGCCCGCTaGTGTGCCGGGACCCCCGTGAGCGAGTCGTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: NSTLPFSKARAR*CAGTPVSESYQ Trigger: CTGGTACGACTCGCTCACGGGGGTCCCGGCACAGCAGCGGGCTCTGGCCTTCGAGAAGGGCAGTGTACTGTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 72 bp | CCACAACCTGCAGCAGGTCCACCTTGCGCAGGACTCTaGACAAGGTGTGAAGCCGCAGCGCCTCCTCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PQPAAGPPCAGL*TRCEAAAPPPG Trigger: GCCAGGAGGAGGCGCTGCGGCTTCACACCTTGTGCAGAGTCCTGCGCAAGGTGGACCTGCTGCAGGTTGTGG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 |
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| CDS TCA 72 bp | AGCTGTGAGTACTTGGCCAGGGAGCGCCGCAGTGCCTaGGTCACCACAACCTGCAGCAGGTCCACCTTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SCEYLARERRSA*VTTTCSRSTLR Trigger: GCGCAAGGTGGACCTGCTGCAGGTTGTGGTGACTCAGGCACTGCGGCGCTCCCTGGCCAAGTACTCACAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS TCA 72 bp | AGCAGGTCCACCTTGCGCAGGACTCTGCACAAGGTGTaGAGCCGCAGCGCCTCCTCCAAGCTTCCTGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SRSTLRRTLHKV*SRSASSKLPAV Trigger: GACCGCAGGAAGCTTGGAGGAGGCGCTGCGGCTTCACACCTTGTGCAGAGTCCTGCGCAAGGTGGACCTGCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| CDS GCA 72 bp | GCAGCGTGGTTGGTGCCCTCGGTGCAGGAGCAATCCTaGCGTGCTCCAATCTGCGTGTGGAGTGCCCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: AAWLVPSVQEQS*RAPICVWSAPM Trigger: CATTGGGGCACTCCACACGCAGATTGGAGCACGGCAGGATTGCTCCTGCACCGAGGGCACCAACCACGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 72 bp | ACCCTTGGCTGGGTGGCTTTCGCAGAGGGCCATGGCTaGATGATAGTGGGCCAGGGCGCAGAAGTGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLGWVAFAEGHG*MIVGQGAEVLS Trigger: GCTGAGCACTTCTGCGCCCTGGCCCACTATCATGCAGCCATGGCCCTCTGCGAAAGCCACCCAGCCAAGGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 72 bp | GGCTCATGGGGAGTGGAGGGCTGGAAGACGTGCTCCTaGCTTGCGAGTTCACCCTTGGCTGGGTGGCTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: GSWGVEGWKTCS*LASSPLAGWLS Trigger: CGAAAGCCACCCAGCCAAGGGTGAACTCGCAAGGCAGGAGCACGTCTTCCAGCCCTCCACTCCCCATGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 72 bp | CCACAACCTGCAGCAGGTCCACCTTGCGCAGGACTCTaGACAAGGTGTGAAGCCGCAGCGCCTCCTCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PQPAAGPPCAGL*TRCEAAAPPPS Trigger: GCTTGGAGGAGGCGCTGCGGCTTCACACCTTGTGCAGAGTCCTGCGCAAGGTGGACCTGCTGCAGGTTGTGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149407.8 |
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| CDS CCA 72 bp | TTCTCCCTCAGGAGTCTGAAGGCCCCAGCAGCCCTCTaGAAAGCCTCAGCAGCGTGGTTGGTGCCCTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSLRSLKAPAAL*KASAAWLVPSV Trigger: CACCGAGGGCACCAACCACGCTGCTGAGGCTTTCCAGAGGGCTGCTGGGGCCTTCAGACTCCTGAGGGAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CAA 72 bp | GGCTGGAAGACGTGCTCCTGCCTTGCGAGTTCACCCTaGGCTGGGTGGCTTTCGCAGAGGGCCATGGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GWKTCSCLASSP*AGWLSQRAMAA Trigger: TGCAGCCATGGCCCTCTGCGAAAGCCACCCAGCCAAGGGTGAACTCGCAAGGCAGGAGCACGTCTTCCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS TCA 72 bp | GGTTTTCAGCACCGGTCCGCATCCGGAGCTCCTTGCTaGTCTGCTGGTGGAGCCGAGCCCTGTGACTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GFQHRSASGAPC*SAGGAEPCDSA Trigger: TGCAGAGTCACAGGGCTCGGCTCCACCAGCAGATCAGCAAGGAGCTCCGGATGCGGACCGGTGCTGAAAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS TCA 72 bp | CGTAGCCTCGAAGAAGTCATCCTCGCGCTCGAGCTGTaGGTACTTGGCCAGGGAGCGCCGCAGTGCCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSLEEVILALEL*VLGQGAPQCLS Trigger: ACTCAGGCACTGCGGCGCTCCCTGGCCAAGTACTCACAGCTCGAGCGCGAGGATGACTTCTTCGAGGCTACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 |
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| CDS GCA 72 bp | AGGCCCGCCTCGTCCCTGCTGGGAGTCCTCGTGGCCTaGCGTAGGTCTTCTAGTTCCTGGATCTCTGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPASSLLGVLVA*RRSSSSWISVS Trigger: TGAGACAGAGATCCAGGAACTAGAAGACCTACGGCAGGCCACGAGGACTCCCAGCAGGGACGAGGCGGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 72 bp | AGGCAGGCAGGTAGTCTCGGACAGGTGGCTGGGCCATaGCCCGGTGCACAAGCCCATATTCAGTTGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: RQAGSLGQVAGP*PGAQAHIQLPP Trigger: AGGTGGCAACTGAATATGGGCTTGTGCACCGGGCCATGGCCCAGCCACCTGTCCGAGACTACCTGCCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 72 bp | GTTAGTCCAGGAGGCAGGCAGGTAGTCTCGGACAGGTaGCTGGGCCATGGCCCGGTGCACAAGCCCATATTC | + |
|
Preference number: 6 (lower is better) Translates to: VSPGGRQVVSDR*LGHGPVHKPIF Trigger: GAATATGGGCTTGTGCACCGGGCCATGGCCCAGCCACCTGTCCGAGACTACCTGCCTGCCTCCTGGACTAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 72 bp | GTTCACCCTTGGCTGGGTGGCTTTCGCAGAGGGCCATaGCTGCATGATAGTGGGCCAGGGCGCAGAAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VHPWLGGFRRGP*LHDSGPGRRSA Trigger: AGCACTTCTGCGCCCTGGCCCACTATCATGCAGCCATGGCCCTCTGCGAAAGCCACCCAGCCAAGGGTGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 72 bp | GCTGGAAGACGTGCTCCTGCCTTGCGAGTTCACCCTTaGCTGGGTGGCTTTCGCAGAGGGCCATGGCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: AGRRAPALRVHP*LGGFRRGPWLH Trigger: ATGCAGCCATGGCCCTCTGCGAAAGCCACCCAGCCAAGGGTGAACTCGCAAGGCAGGAGCACGTCTTCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CAA 72 bp | CATGGGGAGTGGAGGGCTGGAAGACGTGCTCCTGCCTaGCGAGTTCACCCTTGGCTGGGTGGCTTTCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HGEWRAGRRAPA*RVHPWLGGFRR Trigger: TCTGCGAAAGCCACCCAGCCAAGGGTGAACTCGCAAGGCAGGAGCACGTCTTCCAGCCCTCCACTCCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CAA 90 bp | CGACAGGCTAGGCATCCTCACCTCTGGGGTCTGGTGAGTCTTGGGTaGGATGTCTGGGGCCTCCGTAGCCTCGAAGAAGTCATCCTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RQARHPHLWGLVSLG*DVWGLRSLEEVILA Trigger: CGCGAGGATGACTTCTTCGAGGCTACGGAGGCCCCAGACATCCAACCCAAGACTCACCAGACCCCAGAGGTGAGGATGCCTAGCCTGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121137.9 |
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| CDS GCA 72 bp | TCCCTTCGCCCTCTGGCTGGTCCACATCTACGCTGGTaGTCAGCTCTGCCAGCTCCTCTTTCAGCAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLRPLAGPHLRW*SALPAPLSAAA Trigger: TGCAGCTGCTGAAAGAGGAGCTGGCAGAGCTGAGCACCAGCGTAGATGTGGACCAGCCAGAGGGCGAAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 72 bp | GAGCAGCCCGGGGCTCCTGGAGGGACTGAAGAAACGTaGGTCCAGGAAACAGAGCTGGCTATAGTAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EQPGAPGGTEET*VQETELAIVGC Trigger: GCAGCCTACTATAGCCAGCTCTGTTTCCTGGACGCACGTTTCTTCAGTCCCTCCAGGAGCCCCGGGCTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 72 bp | TCTGGAAAGCCTCAGCAGCGTGGTTGGTGCCCTCGGTaGAGGAGCAATCCTGCCGTGCTCCAATCTGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SGKPQQRGWCPR*RSNPAVLQSAC Trigger: ACACGCAGATTGGAGCACGGCAGGATTGCTCCTGCACCGAGGGCACCAACCACGCTGCTGAGGCTTTCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 72 bp | GAGAGAGAGGCAGCACTCATGTCTGGGCTTGGCGCGTaGGAGAAGTTCTCCCTCAGGAGTCTGAAGGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EREAALMSGLGA*EKFSLRSLKAP Trigger: TGGGGCCTTCAGACTCCTGAGGGAGAACTTCTCCCACGCGCCAAGCCCAGACATGAGTGCTGCCTCTCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 72 bp | CGAAGAAGTCATCCTCGCGCTCGAGCTGTGAGTACTTaGCCAGGGAGCGCCGCAGTGCCTGAGTCACCACAA | + |
|
Preference number: 6 (lower is better) Translates to: RRSHPRARAVST*PGSAAVPESPQ Trigger: TTGTGGTGACTCAGGCACTGCGGCGCTCCCTGGCCAAGTACTCACAGCTCGAGCGCGAGGATGACTTCTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 |
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| CDS TCA 72 bp | ACCAGTGGAAGAGCAGCCCGGGGCTCCTGGAGGGACTaGAGAAACGTGCGTCCAGGAAACAGAGCTGGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: TSGRAARGSWRD*RNVRPGNRAGY Trigger: ATAGCCAGCTCTGTTTCCTGGACGCACGTTTCTTCAGTCCCTCCAGGAGCCCCGGGCTGCTCTTCCACTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS CCA 72 bp | GCTCCAGTGCGACTGTTTCTCGGACCCAGGTGTTGCTaGTGGCTCTGTAGAGGTTTTCAGCACCGGTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: APVRLFLGPRCC*WLCRGFQHRSA Trigger: TGCGGACCGGTGCTGAAAACCTCTACAGAGCCACCAGCAACACCTGGGTCCGAGAAACAGTCGCACTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS CCA 72 bp | GAAGACGTGCTCCTGCCTTGCGAGTTCACCCTTGGCTaGGTGGCTTTCGCAGAGGGCCATGGCTGCATGATA | + |
|
Preference number: 6 (lower is better) Translates to: EDVLLPCEFTLG*VAFAEGHGCMI Trigger: TATCATGCAGCCATGGCCCTCTGCGAAAGCCACCCAGCCAAGGGTGAACTCGCAAGGCAGGAGCACGTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
||
| CDS CAA 72 bp | AGACAAGGGTCCCTCTGGGGTCTGGTGAGTCTTGGGTaGGATGTCTGGGGCCTCCGTAGCCTCGAAGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RQGSLWGLVSLG*DVWGLRSLEEV Trigger: GACTTCTTCGAGGCTACGGAGGCCCCAGACATCCAACCCAAGACTCACCAGACCCCAGAGGGACCCTTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023244.6 |
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| CDS TCA 72 bp | GTGCACCGGCCCTACCAACTGCCATCGGTTCTTGGTTaGAAACACAGACAAGGGTCCCTCTGGGGTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: VHRPYQLPSVLG*KHRQGSLWGLV Trigger: CACCAGACCCCAGAGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGTAGGGCCGGTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023244.6 |
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| CDS GCA 72 bp | CTCTGGCTGGTCCACATCTACGCTGGTGCTCAGCTCTaGCAGCTCCTCTTTCAGCAGCTGCAGGTTGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: LWLVHIYAGAQL*QLLFQQLQVGV Trigger: AACTCCAACCTGCAGCTGCTGAAAGAGGAGCTGGCAGAGCTGAGCACCAGCGTAGATGTGGACCAGCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 72 bp | GTGGTTGGTGCCCTCGGTGCAGGAGCAATCCTGCCGTaGTCCAATCTGCGTGTGGAGTGCCCCAATGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: VVGALGAGAILP*SNLRVECPNVK Trigger: TTTAACATTGGGGCACTCCACACGCAGATTGGAGCACGGCAGGATTGCTCCTGCACCGAGGGCACCAACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 72 bp | CAGCATGGAGAGAGAGGCAGCACTCATGTCTGGGCTTaGCGCGTGGGAGAAGTTCTCCCTCAGGAGTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: QHGERGSTHVWA*RVGEVLPQESE Trigger: TTCAGACTCCTGAGGGAGAACTTCTCCCACGCGCCAAGCCCAGACATGAGTGCTGCCTCTCTCTCCATGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 72 bp | CCCTCGGTGCAGGAGCAATCCTGCCGTGCTCCAATCTaGGTGTGGAGTGCCCCAATGTTAAACAGTACACTG | + |
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Preference number: 6 (lower is better) Translates to: PSVQEQSCRAPI*VWSAPMLNSTL Trigger: CAGTGTACTGTTTAACATTGGGGCACTCCACACGCAGATTGGAGCACGGCAGGATTGCTCCTGCACCGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CAA 72 bp | TGTGCACCGGCCCTACCAACTGCCATCGGTTCTTGGTaGAAAACACAGACAAGGGTCCCTCTGGGGTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: CAPALPTAIGSW*KTQTRVPLGSG Trigger: ACCAGACCCCAGAGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGTAGGGCCGGTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023244.6 |
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| CDS CAA 90 bp | TCTGGACAGATGTCAGGTGTGGCAGAGGCTGGCAGTAAAAGGCCCTaGAAGATGCATTCCTGTGCCTGGGCAATCATGAGCTGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SGQMSGVAEAGSKRP*KMHSCAWAIMSCSS Trigger: GCTGGAGCAGCTCATGATTGCCCAGGCACAGGAATGCATCTTCAAGGGCCTTTTACTGCCAGCCTCTGCCACACCTGACATCTGTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 72 bp | GGAGTCCTCGTGGCCTGCCGTAGGTCTTCTAGTTCCTaGATCTCTGTCTCAAAGGAGGTACCATCCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GVLVACRRSSSS*ISVSKEVPSSP Trigger: TGGAGAGGATGGTACCTCCTTTGAGACAGAGATCCAGGAACTAGAAGACCTACGGCAGGCCACGAGGACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 72 bp | GTGCAGGAGCAATCCTGCCGTGCTCCAATCTGCGTGTaGAGTGCCCCAATGTTAAACAGTACACTGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VQEQSCRAPICV*SAPMLNSTLPF Trigger: GAAGGGCAGTGTACTGTTTAACATTGGGGCACTCCACACGCAGATTGGAGCACGGCAGGATTGCTCCTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 72 bp | TCATGTGCACCGGCCCTACCAACTGCCATCGGTTCTTaGTTGAAAACACAGACAAGGGTCCCTCTGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SCAPALPTAIGS*LKTQTRVPLGS Trigger: AGACCCCAGAGGGACCCTTGTCTGTGTTTTCAACCAAGAACCGATGGCAGTTGGTAGGGCCGGTGCACATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023244.6 |
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| CDS GCA 72 bp | ATCTCTGTCTCAAAGGAGGTACCATCCTCTCCAAAGTaGTCAGAGATCAGCTCCTTCAGCGGTGTGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: ISVSKEVPSSPK*SEISSFSGVAQ Trigger: CTGGGCCACACCGCTGAAGGAGCTGATCTCTGAGCACTTTGGAGAGGATGGTACCTCCTTTGAGACAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS GCA 72 bp | GGAGCAATCCTGCCGTGCTCCAATCTGCGTGTGGAGTaGCCCAATGTTAAACAGTACACTGCCCTTCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: GAILPCSNLRVE*PNVKQYTALLE Trigger: TTCGAGAAGGGCAGTGTACTGTTTAACATTGGGGCACTCCACACGCAGATTGGAGCACGGCAGGATTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CCA 72 bp | GGCAGTAAAAGGCCCTTGAAGATGCATTCCTGTGCCTaGGCAATCATGAGCTGCTCCAGCATGGAGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: GSKRPLKMHSCA*AIMSCSSMERE Trigger: CTCTCTCTCCATGCTGGAGCAGCTCATGATTGCCCAGGCACAGGAATGCATCTTCAAGGGCCTTTTACTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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| CDS CAA 72 bp | ATGTCAGGTGTGGCAGAGGCTGGCAGTAAAAGGCCCTaGAAGATGCATTCCTGTGCCTGGGCAATCATGAGC | + |
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Preference number: 6 (lower is better) Translates to: MSGVAEAGSKRP*KMHSCAWAIMS Trigger: GCTCATGATTGCCCAGGCACAGGAATGCATCTTCAAGGGCCTTTTACTGCCAGCCTCTGCCACACCTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023244.6 ENSMUST00000121137.9 ENSMUST00000149407.8 |
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