Pregenerated sensors for RHOX5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095180Ensembl transcript IDs: ENSMUST00000179626.3, ENSMUST00000184866.10, ENSMUST00000239523.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTAAGGGCGGAGTAGCCTGGTaGCCTTGCGGCTGGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: GTNILGIHLFIAEFLKSKGGVAW*PCGWNP Trigger: AGGGTTCCAGCCGCAAGGTCACCAGGCTACTCCGCC...CTTACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CCA 90 bp | CATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCGCTCCCACTCCAGGCTaGCCCTGTGCACCTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: HRGNGTNILGIHLFIAEFAPTPG*PCAPCS Trigger: TGAGCAAGGTGCACAGGGCCAGCCTGGAGTGGGAGC...GAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR TCA 90 bp | AATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTGGCGGAGTAGCCTGGTaGCCTTGCGGCTGGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: NGTNILGIHLFIAEFLKSGGVAW*PCGWNP Trigger: AGGGTTCCAGCCGCAAGGTCACCAGGCTACTCCGCC...ACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | AGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGTCCAGGCTGGCCCTGTaGACCTTGCTCATCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGNGTNILGIHLFIAEFLSRLAL*TLLISP Trigger: GGGAGAGATGAGCAAGGTGCACAGGGCCAGCCTGGA...CAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CCA 90 bp | GGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTAAGGCTCCCACTCCAGGCTaGCCCTGTGCACCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTNILGIHLFIAEFLKSKAPTPG*PCAPCS Trigger: TGAGCAAGGTGCACAGGGCCAGCCTGGAGTGGGAGC...CTTACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CCA 90 bp | ATCATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATGCTCCCACTCCAGGCTaGCCCTGTGCACCTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IIEVMEQTYWESTSLLLNAPTPG*PCAPCS Trigger: TGAGCAAGGTGCACAGGGCCAGCCTGGAGTGGGAGC...ATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CCA 90 bp | AGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGCCACACCACCAGCCCTaGTGCCACTATCCTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGNGTNILGIHLFIAEFLPHHQP*CHYPCP Trigger: GGGACAAGGATAGTGGCACCAGGGCTGGTGGTGTGG...CAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | GGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAATCCAGGCTGGCCCTGTaGACCTTGCTCATCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GNGTNILGIHLFIAEFLKSRLAL*TLLISP Trigger: GGGAGAGATGAGCAAGGTGCACAGGGCCAGCCTGGA...TTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | ATCATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCCAGGCTGGCCCTGTaGACCTTGCTCATCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IIEVMEQTYWESTSLLLNSRLAL*TLLISP Trigger: GGGAGAGATGAGCAAGGTGCACAGGGCCAGCCTGGA...ATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | CATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCCACCACCAGCCCTGGTaGCACTATCCTTGTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRGNGTNILGIHLFIAEFHHQPW*HYPCPH Trigger: ATGGGGACAAGGATAGTGGCACCAGGGCTGGTGGTG...GAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | CATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCAGTTCCCTCAGTCGATaGTGGGCGAACCTAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRGNGTNILGIHLFIAEFSSLSR*WANLEP Trigger: GGGCTCTAGGTTCGCCCAGCATCGACTGAGGGAACT...GAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CCA 90 bp | GGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAACCACACCACCAGCCCTaGTGCCACTATCCTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GNGTNILGIHLFIAEFLKPHHQP*CHYPCP Trigger: GGGACAAGGATAGTGGCACCAGGGCTGGTGGTGTGG...TTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | GGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTAAGTGGCCCTGTGCACCTTaGTCATCTCTCCCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTNILGIHLFIAEFLKSKWPCAP*SSLPSP Trigger: TGGAGAGGGGAGAGATGAGCAAGGTGCACAGGGCCA...CTTACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | GGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAATGGCCCTGTGCACCTTaGTCATCTCTCCCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNGTNILGIHLFIAEFLKWPCAP*SSLPSP Trigger: TGGAGAGGGGAGAGATGAGCAAGGTGCACAGGGCCA...TTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | ATCATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTGGCCCTGTGCACCTTaGTCATCTCTCCCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IIEVMEQTYWESTSLLLNWPCAP*SSLPSP Trigger: TGGAGAGGGGAGAGATGAGCAAGGTGCACAGGGCCA...ATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | GGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAACACCACCAGCCCTGGTaGCACTATCCTTGTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNGTNILGIHLFIAEFLKHHQPW*HYPCPH Trigger: ATGGGGACAAGGATAGTGGCACCAGGGCTGGTGGTG...TTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | GGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTAAGCACCACCAGCCCTGGTaGCACTATCCTTGTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTNILGIHLFIAEFLKSKHHQPW*HYPCPH Trigger: ATGGGGACAAGGATAGTGGCACCAGGGCTGGTGGTG...CTTACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | CATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTCTCCTGGCTCTCAGTaGCCTCAGCAACTGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: HRGNGTNILGIHLFIAEFSPGSQ*PQQLAH Trigger: ATGAGCCAGTTGCTGAGGGCACTGAGAGCCAGGAGA...GAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | GGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTAAGAGTTCCCTCAGTCGATaGTGGGCGAACCTAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTNILGIHLFIAEFLKSKSSLSR*WANLEP Trigger: GGGCTCTAGGTTCGCCCAGCATCGACTGAGGGAACT...CTTACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | ATAATCATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAGTTCCCTCAGTCGATaGTGGGCGAACCTAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: IIIEVMEQTYWESTSLLLSSLSR*WANLEP Trigger: GGGCTCTAGGTTCGCCCAGCATCGACTGAGGGAACT...CAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATGATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | GGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTAAGGGCTCATTTTGTTCCTaGTCCACACCACCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTNILGIHLFIAEFLKSKGSFCS*STPPAL Trigger: CAGGGCTGGTGGTGTGGAGCAGGAACAAAATGAGCC...CTTACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | GGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAGGCTCATTTTGTTCCTaGTCCACACCACCAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GNGTNILGIHLFIAEFLKGSFCS*STPPAL Trigger: CAGGGCTGGTGGTGTGGAGCAGGAACAAAATGAGCC...TTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | GGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAATCTCCTGGCTCTCAGTaGCCTCAGCAACTGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: GNGTNILGIHLFIAEFLKSPGSQ*PQQLAH Trigger: ATGAGCCAGTTGCTGAGGGCACTGAGAGCCAGGAGA...TTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CCA 90 bp | AGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGGGATTTCCATTCTCCTaGCTCTCAGTGCCCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RGNGTNILGIHLFIAEFLGFPFS*LSVPSA Trigger: TGCTGAGGGCACTGAGAGCCAGGAGAATGGAAATCC...CAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | AATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTGGCTCATTTTGTTCCTaGTCCACACCACCAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: NGTNILGIHLFIAEFLKSGSFCS*STPPAL Trigger: CAGGGCTGGTGGTGTGGAGCAGGAACAAAATGAGCC...ACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | AATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTTCTCCTGGCTCTCAGTaGCCTCAGCAACTGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: NGTNILGIHLFIAEFLKSSPGSQ*PQQLAH Trigger: ATGAGCCAGTTGCTGAGGGCACTGAGAGCCAGGAGA...ACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | CATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTCAGGGACTGGTGTTaGCCTCCTCCTGTTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: HRGNGTNILGIHLFIAEFFRDWC*PPPVSS Trigger: AGAAGAAACAGGAGGAGGGCAACACCAGTCCCTGAA...GAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CCA 90 bp | ATAATCATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGGGATTTCCATTCTCCTaGCTCTCAGTGCCCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IIIEVMEQTYWESTSLLLGFPFS*LSVPSA Trigger: TGCTGAGGGCACTGAGAGCCAGGAGAATGGAAATCC...CAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATGATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | ATAATCATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGTTCAGGGACTGGTGTTaGCCTCCTCCTGTTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: IIIEVMEQTYWESTSLLLFRDWC*PPPVSS Trigger: AGAAGAAACAGGAGGAGGGCAACACCAGTCCCTGAA...CAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATGATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CCA 90 bp | AATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTGGATTTCCATTCTCCTaGCTCTCAGTGCCCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NGTNILGIHLFIAEFLKSGFPFS*LSVPSA Trigger: TGCTGAGGGCACTGAGAGCCAGGAGAATGGAAATCC...ACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR TCA 90 bp | AGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGGCTTCCATACCTGGATaGTTCTTTGTGCTTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: RGNGTNILGIHLFIAEFLASIPG*FFVLPL Trigger: AAGAGGAAGCACAAAGAATCATCCAGGTATGGAAGC...CAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179626.3 |
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| CDS-3UTR GCA 90 bp | AGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGCTGGATGATTCTTTGTaGTTCCTCTTGTCCACGGAA | + |
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Preference number: 4 (lower is better) Translates to: RGNGTNILGIHLFIAEFLLDDSL*FLLSTE Trigger: TTCCGTGGACAAGAGGAAGCACAAAGAATCATCCAG...CAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179626.3 |
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| CDS-3UTR GCA 90 bp | AGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGTCTGCTTTCACATCATaGTGTTCTTCCGAGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RGNGTNILGIHLFIAEFLSAFTS*CSSESS Trigger: GGAAGACTCGGAAGAACAGCATGATGTGAAAGCAGA...CAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | GGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTAAGTCTGCTTTCACATCATaGTGTTCTTCCGAGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GTNILGIHLFIAEFLKSKSAFTS*CSSESS Trigger: GGAAGACTCGGAAGAACAGCATGATGTGAAAGCAGA...CTTACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | ATCATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTGCTTTCACATCATaGTGTTCTTCCGAGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: IIEVMEQTYWESTSLLLNSAFTS*CSSESS Trigger: GGAAGACTCGGAAGAACAGCATGATGTGAAAGCAGA...ATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | GGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAACTGGAAGAAAGCCTCTaGTTTCACATCATGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: GNGTNILGIHLFIAEFLKLEESL*FHIMLF Trigger: GAACAGCATGATGTGAAAGCAGAGGCTTTCTTCCAG...TTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CCA 90 bp | ATAATCATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGCTCTTACAAAACTGCTaGACGTTACTATCTCCCGTC | + |
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Preference number: 4 (lower is better) Translates to: IIIEVMEQTYWESTSLLLLLQNC*TLLSPV Trigger: GACGGGAGATAGTAACGTCCAGCAGTTTTGTAAGAG...CAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATGATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179626.3 |
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| CDS-3UTR CCA 90 bp | GGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTAAGGCACCAGGACCAAAGTaGCCTTTTCCTCCATTTAAT | + |
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Preference number: 4 (lower is better) Translates to: GTNILGIHLFIAEFLKSKAPGPK*PFPPFN Trigger: ATTAAATGGAGGAAAAGGCCACTTTGGTCCTGGTGC...CTTACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | GGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAATCTTAAACCAATTCTaGACTCTGGACACACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GNGTNILGIHLFIAEFLKILNQF*TLDTQA Trigger: TGCCTGTGTGTCCAGAGTGCAGAATTGGTTTAAGAT...TTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | ATCATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATATCTTAAACCAATTCTaGACTCTGGACACACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: IIEVMEQTYWESTSLLLNILNQF*TLDTQA Trigger: TGCCTGTGTGTCCAGAGTGCAGAATTGGTTTAAGAT...ATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR GCA 90 bp | AATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTATCTTAAACCAATTCTaGACTCTGGACACACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: NGTNILGIHLFIAEFLKSILNQF*TLDTQA Trigger: TGCCTGTGTGTCCAGAGTGCAGAATTGGTTTAAGAT...ACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS GCA 90 bp | TCCCTCAGTCGATGCTGGGCGAACCTAGAGCCCTGGAGGGGCATCTaGCTACCCCCAGGATTTCCATTCTCCTGGCTCTCAGTGCCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SLSRCWANLEPWRGI*LPPGFPFSWLSVPS Trigger: TGAGGGCACTGAGAGCCAGGAGAATGGAAATCCTGGGGGTAGGCAGATGCCCCTCCAGGGCTCTAGGTTCGCCCAGCATCGACTGAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS CCA 90 bp | ATGGACTCCAGTTCCCTCAGTCGATGCTGGGCGAACCTAGAGCCCTaGAGGGGCATCTGCCTACCCCCAGGATTTCCATTCTCCTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: MDSSSLSRCWANLEP*RGICLPPGFPFSWL Trigger: GAGCCAGGAGAATGGAAATCCTGGGGGTAGGCAGATGCCCCTCCAGGGCTCTAGGTTCGCCCAGCATCGACTGAGGGAACTGGAGTCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS CCA 90 bp | ACCCCCAGGATTTCCATTCTCCTGGCTCTCAGTGCCCTCAGCAACTaGCTCATTTTGTTCCTGCTCCACACCACCAGCCCTGGTGCCACT | + |
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Preference number: 5 (lower is better) Translates to: TPRISILLALSALSN*LILFLLHTTSPGAT Trigger: AGTGGCACCAGGGCTGGTGGTGTGGAGCAGGAACAAAATGAGCCAGTTGCTGAGGGCACTGAGAGCCAGGAGAATGGAAATCCTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS TCA 90 bp | AGCCTGGTGACCTTGCGGCTGGAACCCTCAGCTTCCATACCTGGATaGTTCTTTGTGCTTCCTCTTGTCCACGGAAGGCAGGAGGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: SLVTLRLEPSASIPG*FFVLPLVHGRQEVS Trigger: GCTCACCTCCTGCCTTCCGTGGACAAGAGGAAGCACAAAGAATCATCCAGGTATGGAAGCTGAGGGTTCCAGCCGCAAGGTCACCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179626.3 |
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| CDS GCA 90 bp | TTCTCCTGGCTCTCAGTGCCCTCAGCAACTGGCTCATTTTGTTCCTaGTCCACACCACCAGCCCTGGTGCCACTATCCTTGTCCCCATCA | + |
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Preference number: 5 (lower is better) Translates to: FSWLSVPSATGSFCS*STPPALVPLSLSPS Trigger: TGATGGGGACAAGGATAGTGGCACCAGGGCTGGTGGTGTGGAGCAGGAACAAAATGAGCCAGTTGCTGAGGGCACTGAGAGCCAGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS GCA 90 bp | TCTCTCCCCTCTCCAGCCTGGAAGAAAGCCTCTGCTTTCACATCATaGTGTTCTTCCGAGTCTTCCTTGACTCCCAGGCGGAGTAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: SLPSPAWKKASAFTS*CSSESSLTPRRSSL Trigger: CAGGCTACTCCGCCTGGGAGTCAAGGAAGACTCGGAAGAACAGCATGATGTGAAAGCAGAGGCTTTCTTCCAGGCTGGAGAGGGGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS GCA 90 bp | TGCACCTTGCTCATCTCTCCCCTCTCCAGCCTGGAAGAAAGCCTCTaGTTTCACATCATGCTGTTCTTCCGAGTCTTCCTTGACTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: CTLLISPLSSLEESL*FHIMLFFRVFLDSQ Trigger: CTGGGAGTCAAGGAAGACTCGGAAGAACAGCATGATGTGAAAGCAGAGGCTTTCTTCCAGGCTGGAGAGGGGAGAGATGAGCAAGGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS CCA 90 bp | ACGACAAGCAGGACACTCGAATGTTCCTCTAAAATGTTCAGGGACTaGTGTTGCCCTCCTCCTGTTTCTTCTGGCCGCAGCCCTCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: TTSRTLECSSKMFRD*CCPPPVSSGRSPPD Trigger: ATCAGGAGGGCTGCGGCCAGAAGAAACAGGAGGAGGGCAACACCAGTCCCTGAACATTTTAGAGGAACATTCGAGTGTCCTGCTTGTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS CCA 90 bp | TCCTTGTCCCCATCACCCATAGGACCAGGAGCACCAGGACCAAAGTaGCCTTTTCCTCCATTTAATTCTTCTCCTTCGCCTTCTGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: SLSPSPIGPGAPGPK*PFPPFNSSPSPSVP Trigger: GGGAACAGAAGGCGAAGGAGAAGAATTAAATGGAGGAAAAGGCCACTTTGGTCCTGGTGCTCCTGGTCCTATGGGTGATGGGGACAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS GCA 90 bp | CTCCTGTTTCTTCTGGCCGCAGCCCTCCTGATCTTAAACCAATTCTaGACTCTGGACACACAGGCATCCATCAGTCTATCAAGATCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LLFLLAAALLILNQF*TLDTQASISLSRSS Trigger: GGAGGATCTTGATAGACTGATGGATGCCTGTGTGTCCAGAGTGCAGAATTGGTTTAAGATCAGGAGGGCTGCGGCCAGAAGAAACAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS GCA 90 bp | AGCAGGACACTCGAATGTTCCTCTAAAATGTTCAGGGACTGGTGTTaGCCTCCTCCTGTTTCTTCTGGCCGCAGCCCTCCTGATCTTAAA | + |
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Preference number: 5 (lower is better) Translates to: SRTLECSSKMFRDWC*PPPVSSGRSPPDLK Trigger: TTTAAGATCAGGAGGGCTGCGGCCAGAAGAAACAGGAGGAGGGCAACACCAGTCCCTGAACATTTTAGAGGAACATTCGAGTGTCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS CCA 90 bp | CACTCTGGACACACAGGCATCCATCAGTCTATCAAGATCCTCCCTTaGGACATCAAAGGAATTAGTGCGCTGCAAAATGGACTCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: HSGHTGIHQSIKILP*DIKGISALQNGLQF Trigger: GAACTGGAGTCCATTTTGCAGCGCACTAATTCCTTTGATGTCCCAAGGGAGGATCTTGATAGACTGATGGATGCCTGTGTGTCCAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CAA 90 bp | AGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAGGCAGGAGGTGAGCTaGAAGGACTGTGCAGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: RGNGTNILGIHLFIAEFLRQEVS*KDCAGS Trigger: GCTCCCTGCACAGTCCTTCAAGCTCACCTCCTGCCT...CAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179626.3 |
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| CDS-3UTR CAA 90 bp | AGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAGTAGCCTGGTGACCTaGCGGCTGGAACCCTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RGNGTNILGIHLFIAEFLSSLVT*RLEPSA Trigger: AGCTGAGGGTTCCAGCCGCAAGGTCACCAGGCTACT...CAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CAA 90 bp | ATAATCATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAGTAGCCTGGTGACCTaGCGGCTGGAACCCTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: IIIEVMEQTYWESTSLLLSSLVT*RLEPSA Trigger: AGCTGAGGGTTCCAGCCGCAAGGTCACCAGGCTACT...CAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATGATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CAA 90 bp | GGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTAAGAGTAGCCTGGTGACCTaGCGGCTGGAACCCTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: GTNILGIHLFIAEFLKSKSSLVT*RLEPSA Trigger: AGCTGAGGGTTCCAGCCGCAAGGTCACCAGGCTACT...CTTACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CAA 90 bp | AGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGGTTCAGGGACTGGTGTaGCCCTCCTCCTGTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RGNGTNILGIHLFIAEFLVQGLV*PSSCFF Trigger: GAAGAAACAGGAGGAGGGCAACACCAGTCCCTGAAC...CAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CAA 90 bp | AGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAGCAACTGGCTCATTTaGTTCCTGCTCCACACCACC | + |
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Preference number: 5 (lower is better) Translates to: RGNGTNILGIHLFIAEFLSNWLI*FLLHTT Trigger: GGTGGTGTGGAGCAGGAACAAAATGAGCCAGTTGCT...CAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CAA 90 bp | GGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTAAGGTTCAGGGACTGGTGTaGCCCTCCTCCTGTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: GTNILGIHLFIAEFLKSKVQGLV*PSSCFF Trigger: GAAGAAACAGGAGGAGGGCAACACCAGTCCCTGAAC...CTTACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CAA 90 bp | GGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGCAACTGGCTCATTTaGTTCCTGCTCCACACCACC | + |
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Preference number: 5 (lower is better) Translates to: GNGTNILGIHLFIAEFLKSNWLI*FLLHTT Trigger: GGTGGTGTGGAGCAGGAACAAAATGAGCCAGTTGCT...TTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CAA 90 bp | GGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTAAGAGCAACTGGCTCATTTaGTTCCTGCTCCACACCACC | + |
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Preference number: 5 (lower is better) Translates to: GTNILGIHLFIAEFLKSKSNWLI*FLLHTT Trigger: GGTGGTGTGGAGCAGGAACAAAATGAGCCAGTTGCT...CTTACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CAA 90 bp | AATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTCTTGAAAAGTGTTCAGGGACTGGTGTaGCCCTCCTCCTGTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: NGTNILGIHLFIAEFLKSVQGLV*PSSCFF Trigger: GAAGAAACAGGAGGAGGGCAACACCAGTCCCTGAAC...ACTTTTCAAGAATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS-3UTR CAA 90 bp | ATCATAGAGGTAATGGAACAAACATACTGGGAATCCACCTCTTTATTGCTGAATTACCTGGATGATTCTTaGTGCTTCCTCTTGTCCACG | + |
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Preference number: 5 (lower is better) Translates to: IIEVMEQTYWESTSLLLNYLDDS*CFLLST Trigger: CGTGGACAAGAGGAAGCACAAAGAATCATCCAGGTA...ATTCAGCAATAAAGAGGTGGATTCCCAGTATGTTTGTTCCATTACCTCTATGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179626.3 |
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| CDS GCA 72 bp | CGATGCTGGGCGAACCTAGAGCCCTGGAGGGGCATCTaGCTACCCCCAGGATTTCCATTCTCCTGGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RCWANLEPWRGI*LPPGFPFSWLS Trigger: TGAGAGCCAGGAGAATGGAAATCCTGGGGGTAGGCAGATGCCCCTCCAGGGCTCTAGGTTCGCCCAGCATCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS GCA 72 bp | GTGCGCTGCAAAATGGACTCCAGTTCCCTCAGTCGATaGTGGGCGAACCTAGAGCCCTGGAGGGGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: VRCKMDSSSLSR*WANLEPWRGIC Trigger: GCAGATGCCCCTCCAGGGCTCTAGGTTCGCCCAGCATCGACTGAGGGAACTGGAGTCCATTTTGCAGCGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS CAA 72 bp | TCCTGCTCCACACCACCAGCCCTGGTGCCACTATCCTaGTCCCCATCACCCATAGGACCAGGAGCACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SCSTPPALVPLS*SPSPIGPGAPG Trigger: TCCTGGTGCTCCTGGTCCTATGGGTGATGGGGACAAGGATAGTGGCACCAGGGCTGGTGGTGTGGAGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS CCA 72 bp | AGTTCCCTCAGTCGATGCTGGGCGAACCTAGAGCCCTaGAGGGGCATCTGCCTACCCCCAGGATTTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: SSLSRCWANLEP*RGICLPPGFPF Trigger: GAATGGAAATCCTGGGGGTAGGCAGATGCCCCTCCAGGGCTCTAGGTTCGCCCAGCATCGACTGAGGGAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS CAA 72 bp | CTCCTGGCTCTCAGTGCCCTCAGCAACTGGCTCATTTaGTTCCTGCTCCACACCACCAGCCCTGGTGCCACT | + |
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Preference number: 6 (lower is better) Translates to: LLALSALSNWLI*FLLHTTSPGAT Trigger: AGTGGCACCAGGGCTGGTGGTGTGGAGCAGGAACAAAATGAGCCAGTTGCTGAGGGCACTGAGAGCCAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS GCA 72 bp | CTCTCAGTGCCCTCAGCAACTGGCTCATTTTGTTCCTaGTCCACACCACCAGCCCTGGTGCCACTATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LSVPSATGSFCS*STPPALVPLSL Trigger: CAAGGATAGTGGCACCAGGGCTGGTGGTGTGGAGCAGGAACAAAATGAGCCAGTTGCTGAGGGCACTGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS CAA 72 bp | GTGCTTCCTCTTGTCCACGGAAGGCAGGAGGTGAGCTaGAAGGACTGTGCAGGGAGCCTCTTACAAAACTGC | + |
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Preference number: 6 (lower is better) Translates to: VLPLVHGRQEVS*KDCAGSLLQNC Trigger: GCAGTTTTGTAAGAGGCTCCCTGCACAGTCCTTCAAGCTCACCTCCTGCCTTCCGTGGACAAGAGGAAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179626.3 |
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| CDS GCA 72 bp | TCTCCAGCCTGGAAGAAAGCCTCTGCTTTCACATCATaGTGTTCTTCCGAGTCTTCCTTGACTCCCAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SPAWKKASAFTS*CSSESSLTPRR Trigger: CCGCCTGGGAGTCAAGGAAGACTCGGAAGAACAGCATGATGTGAAAGCAGAGGCTTTCTTCCAGGCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS GCA 72 bp | CTCGAATGTTCCTCTAAAATGTTCAGGGACTGGTGTTaGCCTCCTCCTGTTTCTTCTGGCCGCAGCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LECSSKMFRDWC*PPPVSSGRSPP Trigger: AGGAGGGCTGCGGCCAGAAGAAACAGGAGGAGGGCAACACCAGTCCCTGAACATTTTAGAGGAACATTCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS CCA 72 bp | GGTGACCTTGCGGCTGGAACCCTCAGCTTCCATACCTaGATGATTCTTTGTGCTTCCTCTTGTCCACGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GDLAAGTLSFHT*MILCASSCPRK Trigger: CTTCCGTGGACAAGAGGAAGCACAAAGAATCATCCAGGTATGGAAGCTGAGGGTTCCAGCCGCAAGGTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179626.3 |
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| CDS CCA 72 bp | ATTTCCATTCTCCTGGCTCTCAGTGCCCTCAGCAACTaGCTCATTTTGTTCCTGCTCCACACCACCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: ISILLALSALSN*LILFLLHTTSP Trigger: AGGGCTGGTGGTGTGGAGCAGGAACAAAATGAGCCAGTTGCTGAGGGCACTGAGAGCCAGGAGAATGGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS CCA 72 bp | AGGACACTCGAATGTTCCTCTAAAATGTTCAGGGACTaGTGTTGCCCTCCTCCTGTTTCTTCTGGCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RTLECSSKMFRD*CCPPPVSSGRS Trigger: GCTGCGGCCAGAAGAAACAGGAGGAGGGCAACACCAGTCCCTGAACATTTTAGAGGAACATTCGAGTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS GCA 72 bp | CTTCTGGCCGCAGCCCTCCTGATCTTAAACCAATTCTaGACTCTGGACACACAGGCATCCATCAGTCTATCA | + |
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Preference number: 6 (lower is better) Translates to: LLAAALLILNQF*TLDTQASISLS Trigger: TGATAGACTGATGGATGCCTGTGTGTCCAGAGTGCAGAATTGGTTTAAGATCAGGAGGGCTGCGGCCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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| CDS CCA 72 bp | CACACAGGCATCCATCAGTCTATCAAGATCCTCCCTTaGGACATCAAAGGAATTAGTGCGCTGCAAAATGGA | + |
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Preference number: 6 (lower is better) Translates to: HTGIHQSIKILP*DIKGISALQNG Trigger: TCCATTTTGCAGCGCACTAATTCCTTTGATGTCCCAAGGGAGGATCTTGATAGACTGATGGATGCCTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179626.3 ENSMUST00000184866.10 ENSMUST00000239523.1 |
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