RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RHOU (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039960

Ensembl transcript IDs: ENSMUST00000045487.4

Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCTCACGCTTGCTCACTCTCACCAAGCCTGGTGCACACGTGCCCTaGACTGAGCCCTCAGTAGCCCTTAATCAGGAGAAGGTCCCATTC +
Preference number: 1 (lower is better)
Translates to: SSRLLTLTKPGAHVP*TEPSVALNQEKVPF
Trigger: GAATGGGACCTTCTCCTGATTAAGGGCTACTGAGGGCTCAGTGCAGGGCACGTGTGCACCAGGCTTGGTGAGAGTGAGCAAGCGTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR GCA 90 bp CCTGCTTTTAACAGCAGGACACAGATGCCCTGCAGAAGCCAGTCCTaGAAGCTAAGAGCCCTCTCTGGTCTCACCATGAGTCGCTCCCTG +
Preference number: 1 (lower is better)
Translates to: PAFNSRTQMPCRSQS*KLRALSGLTMSRSL
Trigger: CAGGGAGCGACTCATGGTGAGACCAGAGAGGGCTCTTAGCTTGCAGGACTGGCTTCTGCAGGGCATCTGTGTCCTGCTGTTAAAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR GCA 90 bp AGACAAGCACCTCCTCCTGCTTTTAACAGCAGGACACAGATGCCCTaGAGAAGCCAGTCCTGCAAGCTAAGAGCCCTCTCTGGTCTCACC +
Preference number: 1 (lower is better)
Translates to: RQAPPPAFNSRTQMP*RSQSCKLRALSGLT
Trigger: GGTGAGACCAGAGAGGGCTCTTAGCTTGCAGGACTGGCTTCTGCAGGGCATCTGTGTCCTGCTGTTAAAAGCAGGAGGAGGTGCTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR GCA 90 bp TCAGCCCTAAGCTCCCGCACACAGGAAGTTAAGGGCAGAAGAGGGTaGTTTGGGGCTCATCCTATGACAGCCTCGTCCATAAAGAGCTGT +
Preference number: 1 (lower is better)
Translates to: SALSSRTQEVKGRRG*FGAHPMTASSIKSC
Trigger: ACAGCTCTTTATGGACGAGGCTGTCATAGGATGAGCCCCAAAGCACCCTCTTCTGCCCTTAACTTCCTGTGTGCGGGAGCTTAGGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 90 bp GCTGGTTTCAGATCTTTGCCCTTACAAAACCGGGGGTGGCTCGTGTaGTTTCAAAGCTCACGCTTGCTCACTCTCACCAAGCCTGGTGCA +
Preference number: 1 (lower is better)
Translates to: AGFRSLPLQNRGWLV*FQSSRLLTLTKPGA
Trigger: TGCACCAGGCTTGGTGAGAGTGAGCAAGCGTGAGCTTTGAAACCACACGAGCCACCCCCGGTTTTGTAAGGGCAAAGATCTGAAACCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 90 bp ACAGATGCCCTGCAGAAGCCAGTCCTGCAAGCTAAGAGCCCTCTCTaGTCTCACCATGAGTCGCTCCCTGAAGAAAATGTCACATGTGCA +
Preference number: 1 (lower is better)
Translates to: TDALQKPVLQAKSPL*SHHESLPEENVTCA
Trigger: TGCACATGTGACATTTTCTTCAGGGAGCGACTCATGGTGAGACCAGAGAGGGCTCTTAGCTTGCAGGACTGGCTTCTGCAGGGCATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 90 bp GGCCTTGCACATACCTGTCCCCTAAGACAGTGCCTCCCTAGTCAATaGACCCTGAAGGCACTGGGGTTCAAAGTATGTTCATCCCACATT +
Preference number: 1 (lower is better)
Translates to: GLAHTCPLRQCLPSQ*TLKALGFKVCSSHI
Trigger: AATGTGGGATGAACATACTTTGAACCCCAGTGCCTTCAGGGTCCATTGACTAGGGAGGCACTGTCTTAGGGGACAGGTATGTGCAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 90 bp TCACTTCCGGGTGGCTCAGAGACAGGGTGTGAGGTCCAACAACCCTaGCACCAGACTTCAAGTTTGTGTTCTCAATGCTCATTTCCTTGG +
Preference number: 1 (lower is better)
Translates to: SLPGGSETGCEVQQP*HQTSSLCSQCSFPW
Trigger: CCAAGGAAATGAGCATTGAGAACACAAACTTGAAGTCTGGTGCCAGGGTTGTTGGACCTCACACCCTGTCTCTGAGCCACCCGGAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR TCA 90 bp CTATGGCGTCTTGGAAATACCTACAACCCTGTGAAAGAGCTTGCCTaGCACAGGGCTGTCTCAGAACAGTCGGTCATAAGACCCTCACCT +
Preference number: 1 (lower is better)
Translates to: LWRLGNTYNPVKELA*HRAVSEQSVIRPSP
Trigger: AGGTGAGGGTCTTATGACCGACTGTTCTGAGACAGCCCTGTGTCAGGCAAGCTCTTTCACAGGGTTGTAGGTATTTCCAAGACGCCATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR GCA 90 bp GTTCCTATGGCGTCTTGGAAATACCTACAACCCTGTGAAAGAGCTTaGCTGACACAGGGCTGTCTCAGAACAGTCGGTCATAAGACCCTC +
Preference number: 1 (lower is better)
Translates to: VPMASWKYLQPCERA*LTQGCLRTVGHKTL
Trigger: GAGGGTCTTATGACCGACTGTTCTGAGACAGCCCTGTGTCAGGCAAGCTCTTTCACAGGGTTGTAGGTATTTCCAAGACGCCATAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 90 bp AGCAAACTGATAGCTATGATTCACTGTCTGGTTCCTATGGCGTCTTaGAAATACCTACAACCCTGTGAAAGAGCTTGCCTGACACAGGGC +
Preference number: 1 (lower is better)
Translates to: SKLIAMIHCLVPMAS*KYLQPCERACLTQG
Trigger: GCCCTGTGTCAGGCAAGCTCTTTCACAGGGTTGTAGGTATTTCCAAGACGCCATAGGAACCAGACAGTGAATCATAGCTATCAGTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR TCA 90 bp CTCATTTGTAGTATGTTTCAAGTACAAGATCCTGTCCAACATCTTTaGCACGGGAAAAGAGAAGAGCACAGGTCGATAAGGCACCTGCAG +
Preference number: 1 (lower is better)
Translates to: LICSMFQVQDPVQHL*HGKREEHRSIRHLQ
Trigger: CTGCAGGTGCCTTATCGACCTGTGCTCTTCTCTTTTCCCGTGTCAAAGATGTTGGACAGGATCTTGTACTTGAAACATACTACAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR TCA 90 bp CCATTCATTCTCCTTTGTCCTGTACAACACAGCAGAACTTCATGCTaGCACCCCGCTTTGAAGAGCCCTTTTCATATGGAATATAAATTA +
Preference number: 1 (lower is better)
Translates to: PFILLCPVQHSRTSC*HPALKSPFHMEYKL
Trigger: TAATTTATATTCCATATGAAAAGGGCTCTTCAAAGCGGGGTGTCAGCATGAAGTTCTGCTGTGTTGTACAGGACAAAGGAGAATGAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR GCA 90 bp GAGGTCCAACAACCCTGGCACCAGACTTCAAGTTTGTGTTCTCAATaGTCATTTCCTTGGTCTCAACTACATTGGCTTTATTATAACATT +
Preference number: 1 (lower is better)
Translates to: EVQQPWHQTSSLCSQ*SFPWSQLHWLYYNI
Trigger: AATGTTATAATAAAGCCAATGTAGTTGAGACCAAGGAAATGAGCATTGAGAACACAAACTTGAAGTCTGGTGCCAGGGTTGTTGGACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 90 bp AACAATGTTACCACTCAGGCCACAAGGAAACACCTCAGGAGACTATaGCTAATATCATTCACAAACAGTTCATATACTCTAGTGGTTCAG +
Preference number: 1 (lower is better)
Translates to: NNVTTQATRKHLRRL*LISFTNSSYTLVVQ
Trigger: CTGAACCACTAGAGTATATGAACTGTTTGTGAATGATATTAGCCATAGTCTCCTGAGGTGTTTCCTTGTGGCCTGAGTGGTAACATTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR-3UTR GCA 90 bp GTCAAGAAGAGGAAGGTGTGGTGCCCTGACACTTGCAGCCATGCTTGGGGAGGGTTCAAAGCTCACGCTTaGTCACTCTCACCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: VKKRKVWCPDTCSHAWGGFKAHA*SLSPSL
Trigger: CAGGCTTGGTGAGAGTGAGCAAGCGTGAGCTTTGAA...CCCTCCCCAAGCATGGCTGCAAGTGTCAGGGCACCACACCTTCCTCTTCTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR-3UTR GCA 90 bp AGCCACTGGTGGGTAAGGCCTTGCACATACCTGTCCCCTAAGACAGTGCCTCCCAGAAAATGTCACATGTaGACCCAGCACTCGCCTTCT +
Preference number: 2 (lower is better)
Translates to: SHWWVRPCTYLSPKTVPPRKCHM*TQHSPS
Trigger: AGAAGGCGAGTGCTGGGTGCACATGTGACATTTTCT...GGGAGGCACTGTCTTAGGGGACAGGTATGTGCAAGGCCTTACCCACCAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR-3UTR TCA 90 bp GTCAAGAAGAGGAAGGTGTGGTGCCCTGACACTTGCAGCCATGCTTGGGGAGGGAATCCTAAGAGAATCTaGGTAAACAGAAGGGATGGG +
Preference number: 2 (lower is better)
Translates to: VKKRKVWCPDTCSHAWGGNPKRI*VNRRDG
Trigger: CCCATCCCTTCTGTTTACTCAGATTCTCTTAGGATT...CCCTCCCCAAGCATGGCTGCAAGTGTCAGGGCACCACACCTTCCTCTTCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR-3UTR GCA 90 bp GTCAAGAAGAGGAAGGTGTGGTGCCCTGACACTTGCAGCCATGCTTGGGGAGGGTCCATAAAGAGCTGTTaGAGCTTAAACACCTGCTAT +
Preference number: 2 (lower is better)
Translates to: VKKRKVWCPDTCSHAWGGSIKSC*SLNTCY
Trigger: ATAGCAGGTGTTTAAGCTGCAACAGCTCTTTATGGA...CCCTCCCCAAGCATGGCTGCAAGTGTCAGGGCACCACACCTTCCTCTTCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR-3UTR GCA 90 bp AAATACCTACAACCCTGTGAAAGAGCTTGCCTGACACAGGGCTGTCTCAGAACAAAGGGCAGAAGAGGGTaGTTTGGGGCTCATCCTATG +
Preference number: 2 (lower is better)
Translates to: KYLQPCERACLTQGCLRTKGRRG*FGAHPM
Trigger: CATAGGATGAGCCCCAAAGCACCCTCTTCTGCCCTT...TGTTCTGAGACAGCCCTGTGTCAGGCAAGCTCTTTCACAGGGTTGTAGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR-3UTR GCA 90 bp CCCATTTACCAGCAGGAAGAAGCCTTTGACCTGAAATATGGCCTGTTCTTTTACACAGCAGGACACAGATaGCCTGCAGAAGCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: PIYQQEEAFDLKYGLFFYTAGHR*PAEASP
Trigger: AGGACTGGCTTCTGCAGGGCATCTGTGTCCTGCTGT...GTAAAAGAACAGGCCATATTTCAGGTCAAAGGCTTCTTCCTGCTGGTAAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR-3UTR GCA 90 bp GACATAAATAGTCCAGTGGTACGCATCCCAGAAAAGTGTCCAGAACTTGATCACGCCACAAACATGACCTaGAGCGAGAAGCCACTGGTG +
Preference number: 2 (lower is better)
Translates to: DINSPVVRIPEKCPELDHATNMT*SEKPLV
Trigger: CACCAGTGGCTTCTCGCTGCAGGTCATGTTTGTGGC...GTGATCAAGTTCTGGACACTTTTCTGGGATGCGTACCACTGGACTATTTATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR-3UTR CCA 90 bp CCCATTTACCAGCAGGAAGAAGCCTTTGACCTGAAATATGGCCTGTTCTTTTACGCGAGAAGCCACTGGTaGGTAAGGCCTTGCACATAC +
Preference number: 2 (lower is better)
Translates to: PIYQQEEAFDLKYGLFFYARSHW*VRPCTY
Trigger: GTATGTGCAAGGCCTTACCCACCAGTGGCTTCTCGC...GTAAAAGAACAGGCCATATTTCAGGTCAAAGGCTTCTTCCTGCTGGTAAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR-3UTR GCA 90 bp GACATAAATAGTCCAGTGGTACGCATCCCAGAAAAGTGTCCAGAACTTGATCACTGCAGAAGCCAGTCCTaGAAGCTAAGAGCCCTCTCT +
Preference number: 2 (lower is better)
Translates to: DINSPVVRIPEKCPELDHCRSQS*KLRALS
Trigger: AGAGAGGGCTCTTAGCTTGCAGGACTGGCTTCTGCA...GTGATCAAGTTCTGGACACTTTTCTGGGATGCGTACCACTGGACTATTTATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR TCA 72 bp GCAGAGGAGCCAGCGAGCGAGGCTCCCCTTTTGGCTTaGGACTTCTGGGTAGCTGCTCACACGTCTGCCGAG +
Preference number: 3 (lower is better)
Translates to: AEEPASEAPLLA*DFWVAAHTSAE
Trigger: CTCGGCAGACGTGTGAGCAGCTACCCAGAAGTCTCAAGCCAAAAGGGGAGCCTCGCTCGCTGGCTCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR GCA 72 bp AGCTCCCGCACACAGGAAGTTAAGGGCAGAAGAGGGTaGTTTGGGGCTCATCCTATGACAGCCTCGTCCATA +
Preference number: 3 (lower is better)
Translates to: SSRTQEVKGRRG*FGAHPMTASSI
Trigger: TATGGACGAGGCTGTCATAGGATGAGCCCCAAAGCACCCTCTTCTGCCCTTAACTTCCTGTGTGCGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 72 bp CTGCAGAAGCCAGTCCTGCAAGCTAAGAGCCCTCTCTaGTCTCACCATGAGTCGCTCCCTGAAGAAAATGTC +
Preference number: 3 (lower is better)
Translates to: LQKPVLQAKSPL*SHHESLPEENV
Trigger: GACATTTTCTTCAGGGAGCGACTCATGGTGAGACCAGAGAGGGCTCTTAGCTTGCAGGACTGGCTTCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 72 bp GTGTGTCCCATAGCCATCAACTATGGCCTCTCAAGGTaGCCCAATTCCTTGCAAACGGGACGATATGAGCCC +
Preference number: 3 (lower is better)
Translates to: VCPIAINYGLSR*PNSLQTGRYEP
Trigger: GGGCTCATATCGTCCCGTTTGCAAGGAATTGGGCCACCTTGAGAGGCCATAGTTGATGGCTATGGGACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR TCA 72 bp CTTTATGTCACTTCCGGGTGGCTCAGAGACAGGGTGTaGGGTCCAACAACCCTGGCACCAGACTTCAAGTTT +
Preference number: 3 (lower is better)
Translates to: LYVTSGWLRDRV*GPTTLAPDFKF
Trigger: AAACTTGAAGTCTGGTGCCAGGGTTGTTGGACCTCACACCCTGTCTCTGAGCCACCCGGAAGTGACATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR GCA 72 bp TTCGTAAGCAGAAGGCCCTTGCTGGTTTCAGATCTTTaGCCTTACAAAACCGGGGGTGGCTCGTGTGGTTTC +
Preference number: 3 (lower is better)
Translates to: FVSRRPLLVSDL*PYKTGGGSCGF
Trigger: GAAACCACACGAGCCACCCCCGGTTTTGTAAGGGCAAAGATCTGAAACCAGCAAGGGCCTTCTGCTTACGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR GCA 72 bp TCTGTTCAAAGAAATGTCAAGAAGAGGAAGGTGTGGTaGCCTGACACTTGCAGCCATGCTTGGGGAGGGGTG +
Preference number: 3 (lower is better)
Translates to: SVQRNVKKRKVW*PDTCSHAWGGV
Trigger: CACCCCTCCCCAAGCATGGCTGCAAGTGTCAGGGCACCACACCTTCCTCTTCTTGACATTTCTTTGAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 72 bp GGTGGCTCAGAGACAGGGTGTGAGGTCCAACAACCCTaGCACCAGACTTCAAGTTTGTGTTCTCAATGCTCA +
Preference number: 3 (lower is better)
Translates to: GGSETGCEVQQP*HQTSSLCSQCS
Trigger: TGAGCATTGAGAACACAAACTTGAAGTCTGGTGCCAGGGTTGTTGGACCTCACACCCTGTCTCTGAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR TCA 72 bp GGTTCCTATGGCGTCTTGGAAATACCTACAACCCTGTaGAAGAGCTTGCCTGACACAGGGCTGTCTCAGAAC +
Preference number: 3 (lower is better)
Translates to: GSYGVLEIPTTL*KSLPDTGLSQN
Trigger: GTTCTGAGACAGCCCTGTGTCAGGCAAGCTCTTTCACAGGGTTGTAGGTATTTCCAAGACGCCATAGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR TCA 72 bp TCCAGTGGTACGCATCCCAGAAAAGTGTCCAGAACTTaGTCACACAGCGTCCTTTATGTCACTTCCGGGTGG +
Preference number: 3 (lower is better)
Translates to: SSGTHPRKVSRT*SHSVLYVTSGW
Trigger: CCACCCGGAAGTGACATAAAGGACGCTGTGTGATCAAGTTCTGGACACTTTTCTGGGATGCGTACCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR TCA 72 bp TCCAGCCACTTCTCAGCTTTGATGAGAACCCTGACTTaGCGTCCCACCCAGGCACATGCGTTTAGAATTCTC +
Preference number: 3 (lower is better)
Translates to: SSHFSALMRTLT*RPTQAHAFRIL
Trigger: GAGAATTCTAAACGCATGTGCCTGGGTGGGACGTCAAGTCAGGGTTCTCATCAAAGCTGAGAAGTGGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 72 bp ATGTCTGTTCAAAGAAATGTCAAGAAGAGGAAGGTGTaGTGCCCTGACACTTGCAGCCATGCTTGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: MSVQRNVKKRKV*CPDTCSHAWGG
Trigger: CCCTCCCCAAGCATGGCTGCAAGTGTCAGGGCACCACACCTTCCTCTTCTTGACATTTCTTTGAACAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 72 bp CATACCTGTCCCCTAAGACAGTGCCTCCCTAGTCAATaGACCCTGAAGGCACTGGGGTTCAAAGTATGTTCA +
Preference number: 3 (lower is better)
Translates to: HTCPLRQCLPSQ*TLKALGFKVCS
Trigger: TGAACATACTTTGAACCCCAGTGCCTTCAGGGTCCATTGACTAGGGAGGCACTGTCTTAGGGGACAGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR TCA 72 bp CTACATAGCTCACAGGATCCTCCCCAGACACCAAGCTaGACATTCCAGCCACTTCTCAGCTTTGATGAGAAC +
Preference number: 3 (lower is better)
Translates to: LHSSQDPPQTPS*TFQPLLSFDEN
Trigger: GTTCTCATCAAAGCTGAGAAGTGGCTGGAATGTTCAGCTTGGTGTCTGGGGAGGATCCTGTGAGCTATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR GCA 72 bp ACAGTCGGTCATAAGACCCTCACCTTAAAGAACAAGTaGCACAAACATGACCTGCAGCGAGAAGCCACTGGT +
Preference number: 3 (lower is better)
Translates to: TVGHKTLTLKNK*HKHDLQREATG
Trigger: ACCAGTGGCTTCTCGCTGCAGGTCATGTTTGTGGCACTTGTTCTTTAAGGTGAGGGTCTTATGACCGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR-3UTR CAA 90 bp ACCCAGCACTCGCCTTCTACGAGGCATCTCCACCATTTTCATAGCAATATAACTCCCATTCATTCTCCTTaGTCCTGTACAACACAGCAG +
Preference number: 3 (lower is better)
Translates to: TQHSPSTRHLHHFHSNITPIHSP*SCTTQQ
Trigger: CTGCTGTGTTGTACAGGACAAAGGAGAATGAATGGG...AGTTATATTGCTATGAAAATGGTGGAGATGCCTCGTAGAAGGCGAGTGCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR-3UTR CAA 90 bp CCCATTTACCAGCAGGAAGAAGCCTTTGACCTGAAATATGGCCTGTTCTTTTACGGTTCCTATGGCGTCTaGGAAATACCTACAACCCTG +
Preference number: 3 (lower is better)
Translates to: PIYQQEEAFDLKYGLFFYGSYGV*EIPTTL
Trigger: CAGGGTTGTAGGTATTTCCAAGACGCCATAGGAACC...GTAAAAGAACAGGCCATATTTCAGGTCAAAGGCTTCTTCCTGCTGGTAAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 72 bp ATAGCTATGATTCACTGTCTGGTTCCTATGGCGTCTTaGAAATACCTACAACCCTGTGAAAGAGCTTGCCTG +
Preference number: 3 (lower is better)
Translates to: IAMIHCLVPMAS*KYLQPCERACL
Trigger: CAGGCAAGCTCTTTCACAGGGTTGTAGGTATTTCCAAGACGCCATAGGAACCAGACAGTGAATCATAGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR-3UTR CAA 90 bp GACATAAATAGTCCAGTGGTACGCATCCCAGAAAAGTGTCCAGAACTTGATCACGTACAGGCAGGCATTTaGGTGGACTTAAGGAAAAAG +
Preference number: 3 (lower is better)
Translates to: DINSPVVRIPEKCPELDHVQAGI*VDLRKK
Trigger: CTTTTTCCTTAAGTCCACCAAAATGCCTGCCTGTAC...GTGATCAAGTTCTGGACACTTTTCTGGGATGCGTACCACTGGACTATTTATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR TCA 72 bp AGTATGTTTCAAGTACAAGATCCTGTCCAACATCTTTaGCACGGGAAAAGAGAAGAGCACAGGTCGATAAGG +
Preference number: 3 (lower is better)
Translates to: SMFQVQDPVQHL*HGKREEHRSIR
Trigger: CCTTATCGACCTGTGCTCTTCTCTTTTCCCGTGTCAAAGATGTTGGACAGGATCTTGTACTTGAAACATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR GCA 72 bp CAACCCTGGCACCAGACTTCAAGTTTGTGTTCTCAATaGTCATTTCCTTGGTCTCAACTACATTGGCTTTAT +
Preference number: 3 (lower is better)
Translates to: QPWHQTSSLCSQ*SFPWSQLHWLY
Trigger: ATAAAGCCAATGTAGTTGAGACCAAGGAAATGAGCATTGAGAACACAAACTTGAAGTCTGGTGCCAGGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CCA 72 bp ACCACTCAGGCCACAAGGAAACACCTCAGGAGACTATaGCTAATATCATTCACAAACAGTTCATATACTCTA +
Preference number: 3 (lower is better)
Translates to: TTQATRKHLRRL*LISFTNSSYTL
Trigger: TAGAGTATATGAACTGTTTGTGAATGATATTAGCCATAGTCTCCTGAGGTGTTTCCTTGTGGCCTGAGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR TCA 90 bp GTCAAGAAGAGGAAGGTGTGGTGCCCTGACACTTGCAGCCATGCTTGGGGAGGGCGACCAGCACGCACTTaGCGCCGCGTCCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: VKKRKVWCPDTCSHAWGGRPART*RRVPRR
Trigger: GCGCCGAGGGACGCGGCGTCAAGTGCGTGCTGGTCG...CCCTCCCCAAGCATGGCTGCAAGTGTCAGGGCACCACACCTTCCTCTTCTTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR CCA 90 bp GTCAAGAAGAGGAAGGTGTGGTGCCCTGACACTTGCAGCCATGCTTGGGGAGGGGCAGTGTCACAGAGCTaGAGTCTCACAGGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: VKKRKVWCPDTCSHAWGGAVSQS*SLTGRP
Trigger: TGGGCGGCCTGTGAGACTCCAGCTCTGTGACACTGC...CCCTCCCCAAGCATGGCTGCAAGTGTCAGGGCACCACACCTTCCTCTTCTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR TCA 90 bp GTCAAGAAGAGGAAGGTGTGGTGCCCTGACACTTGCAGCCATGCTTGGGGAGGGTGGGGCTCACCACGCTaGAGCACAGCAGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: VKKRKVWCPDTCSHAWGGWGSPR*STAGRC
Trigger: ACATCTTCCTGCTGTGCTTCAGCGTGGTGAGCCCCA...CCCTCCCCAAGCATGGCTGCAAGTGTCAGGGCACCACACCTTCCTCTTCTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR CCA 90 bp AGCTCACGCTTGCTCACTCTCACCAAGCCTGGTGCACACGTGCCCTGCACTGAGGATGATGGGGGCCTTTaGGCAGTGACGTCGAATCTC +
Preference number: 4 (lower is better)
Translates to: SSRLLTLTKPGAHVPCTEDDGGL*AVTSNL
Trigger: GAGATTCGACGTCACTGCCCAAAGGCCCCCATCATC...CTCAGTGCAGGGCACGTGTGCACCAGGCTTGGTGAGAGTGAGCAAGCGTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR TCA 90 bp ACAAACATGACCTGCAGCGAGAAGCCACTGGTGGGTAAGGCCTTGCACATACCTGTGTCCCGACCAGGATaGTGGGGGCCTTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TNMTCSEKPLVGKALHIPVSRPG*WGPLGS
Trigger: ACTGCCCAAAGGCCCCCATCATCCTGGTCGGGACAC...AGGTATGTGCAAGGCCTTACCCACCAGTGGCTTCTCGCTGCAGGTCATGTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR TCA 90 bp AGCTCACGCTTGCTCACTCTCACCAAGCCTGGTGCACACGTGCCCTGCACTGAGTTTCTGAGTCAACGCTaGGCACTCGATGTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: SSRLLTLTKPGAHVPCTEFLSQR*ALDVGD
Trigger: GTCTCCTACATCGAGTGCTCAGCGTTGACTCAGAAA...CTCAGTGCAGGGCACGTGTGCACCAGGCTTGGTGAGAGTGAGCAAGCGTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR TCA 90 bp AGCTCACGCTTGCTCACTCTCACCAAGCCTGGTGCACACGTGCCCTGCACTGAGCGTCGAAAACCTCTTTaGGGTTTTTCTGAGTCAACG +
Preference number: 4 (lower is better)
Translates to: SSRLLTLTKPGAHVPCTERRKPL*GFSEST
Trigger: CGTTGACTCAGAAAAACCTCAAAGAGGTTTTCGACG...CTCAGTGCAGGGCACGTGTGCACCAGGCTTGGTGAGAGTGAGCAAGCGTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CAA 72 bp GTCCAGTGGTACGCATCCCAGAAAAGTGTCCAGAACTaGATCACACAGCGTCCTTTATGTCACTTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: VQWYASQKSVQN*ITQRPLCHFRV
Trigger: CACCCGGAAGTGACATAAAGGACGCTGTGTGATCAAGTTCTGGACACTTTTCTGGGATGCGTACCACTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR TCA 90 bp AGCCCAGCACACTTAAAGCTCCCAGACAAGCACCTCCTCCTGCTTTTAACAGCATCTTTGAGGTTTTTCTaGGTCAACGCTGAGCACTCG +
Preference number: 4 (lower is better)
Translates to: SPAHLKLPDKHLLLLLTASLRFF*VNAEHS
Trigger: CGAGTGCTCAGCGTTGACTCAGAAAAACCTCAAAGA...TGCTGTTAAAAGCAGGAGGAGGTGCTTGTCTGGGAGCTTTAAGTGTGCTGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR CCA 90 bp AAATACCTACAACCCTGTGAAAGAGCTTGCCTGACACAGGGCTGTCTCAGAACAGGAAGATGTCTGTGTTaGTGTAGCAGAGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KYLQPCERACLTQGCLRTGRCLC*CSRGAS
Trigger: TGAGGCCCCTCTGCTACACCAACACAGACATCTTCC...TGTTCTGAGACAGCCCTGTGTCAGGCAAGCTCTTTCACAGGGTTGTAGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR CCA 90 bp ATCTCCATAAGCAAAACAATGTTACCACTCAGGCCACAAGGAAACACCTCAGGATTCTCGCCCACGTTCTaGAAGGATGTGGGGCTCACC +
Preference number: 4 (lower is better)
Translates to: ISISKTMLPLRPQGNTSGFSPTF*KDVGLT
Trigger: GGTGAGCCCCACATCCTTCCAGAACGTGGGCGAGAA...TCCTGAGGTGTTTCCTTGTGGCCTGAGTGGTAACATTGTTTTGCTTATGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR GCA 90 bp ATCTCCATAAGCAAAACAATGTTACCACTCAGGCCACAAGGAAACACCTCAGGAAGCTGGGAGTCTGAGTaGTGGATACCAGCAACAATG +
Preference number: 4 (lower is better)
Translates to: ISISKTMLPLRPQGNTSGSWESE*WIPATM
Trigger: CATTGTTGCTGGTATCCAGCACTCAGACTCCCAGCT...TCCTGAGGTGTTTCCTTGTGGCCTGAGTGGTAACATTGTTTTGCTTATGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
3UTR CAA 72 bp TGTGAGGTCCAACAACCCTGGCACCAGACTTCAAGTTaGTGTTCTCAATGCTCATTTCCTTGGTCTCAACTA +
Preference number: 4 (lower is better)
Translates to: CEVQQPWHQTSS*CSQCSFPWSQL
Trigger: TAGTTGAGACCAAGGAAATGAGCATTGAGAACACAAACTTGAAGTCTGGTGCCAGGGTTGTTGGACCTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR CAA 90 bp ACAAACATGACCTGCAGCGAGAAGCCACTGGTGGGTAAGGCCTTGCACATACCTCCGACCAGCACGCACTaGACGCCGCGTCCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: TNMTCSEKPLVGKALHIPPTSTH*TPRPSA
Trigger: CGCCGAGGGACGCGGCGTCAAGTGCGTGCTGGTCGG...AGGTATGTGCAAGGCCTTACCCACCAGTGGCTTCTCGCTGCAGGTCATGTTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS CCA 90 bp CCCGACCAGGATGATGGGGGCCTTTGGGCAGTGACGTCGAATCTCTaGAACCCACTTCTCGCCCACGTTCTGGAAGGATGTGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: PDQDDGGLWAVTSNL*NPLLAHVLEGCGAH
Trigger: GTGAGCCCCACATCCTTCCAGAACGTGGGCGAGAAGTGGGTTCCAGAGATTCGACGTCACTGCCCAAAGGCCCCCATCATCCTGGTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS CCA 90 bp CGCACCTTATCCGGGGTCCTGCTTTTAGACTTCTTTGGCTGTAGCTaGGAGTCTGAGTGCTGGATACCAGCAACAATGGCGGCGTCGAAA +
Preference number: 5 (lower is better)
Translates to: RTLSGVLLLDFFGCS*ESECWIPATMAASK
Trigger: TTTCGACGCCGCCATTGTTGCTGGTATCCAGCACTCAGACTCCCAGCTACAGCCAAAGAAGTCTAAAAGCAGGACCCCGGATAAGGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS TCA 90 bp AATGGCGGCGTCGAAAACCTCTTTGAGGTTTTTCTGAGTCAACGCTaGGCACTCGATGTAGGAGACAGCTTTGACTTCCTCCGCGCACAG +
Preference number: 5 (lower is better)
Translates to: NGGVENLFEVFLSQR*ALDVGDSFDFLRAQ
Trigger: CTGTGCGCGGAGGAAGTCAAAGCTGTCTCCTACATCGAGTGCTCAGCGTTGACTCAGAAAAACCTCAAAGAGGTTTTCGACGCCGCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS-3UTR CAA 90 bp AGACTATGGCTAATATCATTCACAAACAGTTCATATACTCTAGTGGTTCAGCAAGGCACCGGCTTCTCTTaGCACTTGTCCAGTTCTATG +
Preference number: 5 (lower is better)
Translates to: RLWLISFTNSSYTLVVQQGTGFS*HLSSSM
Trigger: CATAGAACTGGACAAGTGCAAAGAGAAGCCGGTGCC...TTGCTGAACCACTAGAGTATATGAACTGTTTGTGAATGATATTAGCCATAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS CAA 90 bp GCGCACAGCTTCGCCGCCTCTTCAGGCACCGGCTTCTCTTTGCACTaGTCCAGTTCTATGAGCACTTTGACGTCCTCCCTGAGGTCCGAC +
Preference number: 6 (lower is better)
Translates to: AHSFAASSGTGFSLH*SSSMSTLTSSLRSD
Trigger: GTCGGACCTCAGGGAGGACGTCAAAGTGCTCATAGAACTGGACAAGTGCAAAGAGAAGCCGGTGCCTGAAGAGGCGGCGAAGCTGTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS CAA 90 bp TCCTCCGCGCACAGCTTCGCCGCCTCTTCAGGCACCGGCTTCTCTTaGCACTTGTCCAGTTCTATGAGCACTTTGACGTCCTCCCTGAGG +
Preference number: 6 (lower is better)
Translates to: SSAHSFAASSGTGFS*HLSSSMSTLTSSLR
Trigger: CCTCAGGGAGGACGTCAAAGTGCTCATAGAACTGGACAAGTGCAAAGAGAAGCCGGTGCCTGAAGAGGCGGCGAAGCTGTGCGCGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS TCA 72 bp GAGTCAACGCTGAGCACTCGATGTAGGAGACAGCTTTaGCTTCCTCCGCGCACAGCTTCGCCGCCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: ESTLSTRCRRQL*LPPRTASPPLQ
Trigger: CTGAAGAGGCGGCGAAGCTGTGCGCGGAGGAAGTCAAAGCTGTCTCCTACATCGAGTGCTCAGCGTTGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS CCA 72 bp GATGATGGGGGCCTTTGGGCAGTGACGTCGAATCTCTaGAACCCACTTCTCGCCCACGTTCTGGAAGGATGT +
Preference number: 6 (lower is better)
Translates to: DDGGLWAVTSNL*NPLLAHVLEGC
Trigger: ACATCCTTCCAGAACGTGGGCGAGAAGTGGGTTCCAGAGATTCGACGTCACTGCCCAAAGGCCCCCATCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS CAA 90 bp TCAGGCACCGGCTTCTCTTTGCACTTGTCCAGTTCTATGAGCACTTaGACGTCCTCCCTGAGGTCCGACTGTGTCCCGACCAGGATGATG +
Preference number: 6 (lower is better)
Translates to: SGTGFSLHLSSSMST*TSSLRSDCVPTRMM
Trigger: CATCATCCTGGTCGGGACACAGTCGGACCTCAGGGAGGACGTCAAAGTGCTCATAGAACTGGACAAGTGCAAAGAGAAGCCGGTGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS CAA 72 bp GGCTTCTCTTTGCACTTGTCCAGTTCTATGAGCACTTaGACGTCCTCCCTGAGGTCCGACTGTGTCCCGACC +
Preference number: 6 (lower is better)
Translates to: GFSLHLSSSMST*TSSLRSDCVPT
Trigger: GGTCGGGACACAGTCGGACCTCAGGGAGGACGTCAAAGTGCTCATAGAACTGGACAAGTGCAAAGAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS CAA 72 bp TTCGCCGCCTCTTCAGGCACCGGCTTCTCTTTGCACTaGTCCAGTTCTATGAGCACTTTGACGTCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: FAASSGTGFSLH*SSSMSTLTSSL
Trigger: CAGGGAGGACGTCAAAGTGCTCATAGAACTGGACAAGTGCAAAGAGAAGCCGGTGCCTGAAGAGGCGGCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS CAA 72 bp CACAGCTTCGCCGCCTCTTCAGGCACCGGCTTCTCTTaGCACTTGTCCAGTTCTATGAGCACTTTGACGTCC +
Preference number: 6 (lower is better)
Translates to: HSFAASSGTGFS*HLSSSMSTLTS
Trigger: GGACGTCAAAGTGCTCATAGAACTGGACAAGTGCAAAGAGAAGCCGGTGCCTGAAGAGGCGGCGAAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS GCA 72 bp CTTTTAGACTTCTTTGGCTGTAGCTGGGAGTCTGAGTaGTGGATACCAGCAACAATGGCGGCGTCGAAAACC +
Preference number: 6 (lower is better)
Translates to: LLDFFGCSWESE*WIPATMAASKT
Trigger: GGTTTTCGACGCCGCCATTGTTGCTGGTATCCAGCACTCAGACTCCCAGCTACAGCCAAAGAAGTCTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4
CDS TCA 72 bp GTCGAAAACCTCTTTGAGGTTTTTCTGAGTCAACGCTaGGCACTCGATGTAGGAGACAGCTTTGACTTCCTC +
Preference number: 6 (lower is better)
Translates to: VENLFEVFLSQR*ALDVGDSFDFL
Trigger: GAGGAAGTCAAAGCTGTCTCCTACATCGAGTGCTCAGCGTTGACTCAGAAAAACCTCAAAGAGGTTTTCGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045487.4