Pregenerated sensors for RHOT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025733Ensembl transcript IDs: ENSMUST00000043897.16, ENSMUST00000176591.8, ENSMUST00000176709.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGGGCTGGAGAGAGGACTTGGTGGTTCAGAGCACTTGCTGCCTCTaGAGAGGACCTGGGTTTGTTTCCAACACCCACGGGATGGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: WGWREDLVVQSTCCL*RGPGFVSNTHGMAH Trigger: GTGAGCCATCCCGTGGGTGTTGGAAACAAACCCAGGTCCTCTGCAGAGGCAGCAAGTGCTCTGAACCACCAAGTCCTCTCTCCAGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR CCA 90 bp | CCTTACACACAATCCTCCCTCCCTCCAAGGCTAAGGCCTCACACCTaGCACCAGTACTCTCAGGCTCAGCAGGACAGGCCTGGAATAGGG | + |
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Preference number: 1 (lower is better) Translates to: PYTQSSLPPRLRPHT*HQYSQAQQDRPGIG Trigger: CCCTATTCCAGGCCTGTCCTGCTGAGCCTGAGAGTACTGGTGCCAGGTGTGAGGCCTTAGCCTTGGAGGGAGGGAGGATTGTGTGTAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR CCA 90 bp | CAGATATTACTCCAACAGGCCGAAAGCCCATACTTCTTTGCCGTGTaGGCCCACATAAGGCACCACAGTGTGCTGTGCCTGGGGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: QILLQQAESPYFFAV*AHIRHHSVLCLGAG Trigger: TCCTGCCCCCAGGCACAGCACACTGTGGTGCCTTATGTGGGCCCACACGGCAAAGAAGTATGGGCTTTCGGCCTGTTGGAGTAATATCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR GCA 90 bp | TTTTTATGGGGCTGGAGAGAGGACTTGGTGGTTCAGAGCACTTGCTaGCTCTGCAGAGGACCTGGGTTTGTTTCCAACACCCACGGGATG | + |
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Preference number: 1 (lower is better) Translates to: FLWGWREDLVVQSTC*LCRGPGFVSNTHGM Trigger: CATCCCGTGGGTGTTGGAAACAAACCCAGGTCCTCTGCAGAGGCAGCAAGTGCTCTGAACCACCAAGTCCTCTCTCCAGCCCCATAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR CCA 90 bp | AGAGGACTTGGTGGTTCAGAGCACTTGCTGCCTCTGCAGAGGACCTaGGTTTGTTTCCAACACCCACGGGATGGCTCACAATCATTAGTT | + |
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Preference number: 1 (lower is better) Translates to: RGLGGSEHLLPLQRT*VCFQHPRDGSQSLV Trigger: AACTAATGATTGTGAGCCATCCCGTGGGTGTTGGAAACAAACCCAGGTCCTCTGCAGAGGCAGCAAGTGCTCTGAACCACCAAGTCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR TCA 90 bp | CGGGATGGCTCACAATCATTAGTTAACTCCAGTTCCAGGGAACTCTaGCATACTCATTTGGCTTCTGTCGGTACCAGGCACACACACGGG | + |
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Preference number: 1 (lower is better) Translates to: RDGSQSLVNSSSREL*HTHLASVGTRHTHG Trigger: CCCGTGTGTGTGCCTGGTACCGACAGAAGCCAAATGAGTATGTCAGAGTTCCCTGGAACTGGAGTTAACTAATGATTGTGAGCCATCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR CCA 90 bp | CAAGTGAAATTTAATCAGGAAAGTCAGTTCCGCTTGCTCTGCAGCTaGCGCAGTGTGGATAAGGCTCCACACCTGACAAAAAGGTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: QVKFNQESQFRLLCS*RSVDKAPHLTKRWD Trigger: GTCCCACCTTTTTGTCAGGTGTGGAGCCTTATCCACACTGCGCCAGCTGCAGAGCAAGCGGAACTGACTTTCCTGATTAAATTTCACTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR GCA 90 bp | AAAAGACAAGTGAAATTTAATCAGGAAAGTCAGTTCCGCTTGCTCTaGAGCTGGCGCAGTGTGGATAAGGCTCCACACCTGACAAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: KRQVKFNQESQFRLL*SWRSVDKAPHLTKR Trigger: CCTTTTTGTCAGGTGTGGAGCCTTATCCACACTGCGCCAGCTGCAGAGCAAGCGGAACTGACTTTCCTGATTAAATTTCACTTGTCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR GCA 90 bp | AGAAAGGAAGGAAGGAAGGGAGGGAGAGAAAGAGAGAAAGTAAGTTaGATTGAGAGATCAAAATCCAAGAGATGGAAAAGACAAGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: RKEGRKGGREREKVS*IERSKSKRWKRQVK Trigger: TTTCACTTGTCTTTTCCATCTCTTGGATTTTGATCTCTCAATGCAACTTACTTTCTCTCTTTCTCTCCCTCCCTTCCTTCCTTCCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR-3UTR TCA 90 bp | TTTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCAGGGTCCCTCCCTGATTTaGCCACTACCTCTTGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: FGFCRYQAHTRGTYIYGQGPSLI*PLPLAL Trigger: GAGGGCAAGAGGTAGTGGTCAAATCAGGGAGGGACC...CTGCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR-3UTR CCA 90 bp | CATTTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCTCGGGTCCTGGTCACTaGATTCCTTACCCACAGCCC | + |
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Preference number: 2 (lower is better) Translates to: HLASVGTRHTHGALTYMGSGPGH*IPYPQP Trigger: GGGCTGTGGGTAAGGAATCCAGTGACCAGGACCCGA...GCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR-3UTR GCA 90 bp | TTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCAGGTTGACCACTACCTCTTaGCCTCTACATGTCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: LASVGTRHTHGALTYMGRLTTTS*PLHVHW Trigger: CCAGTGGACATGTAGAGGGCAAGAGGTAGTGGTCAA...CCTGCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR-3UTR CCA 90 bp | TTGGTGGTTCAGAGCACTTGCTGCCTCTGCAGAGGACCTGGGTTTGTTTCCAACTCAGCAGGACAGGCCTaGAATAGGGCAACAGACTTT | + |
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Preference number: 2 (lower is better) Translates to: LVVQSTCCLCRGPGFVSNSAGQA*NRATDF Trigger: AAAGTCTGTTGCCCTATTCCAGGCCTGTCCTGCTGA...GTTGGAAACAAACCCAGGTCCTCTGCAGAGGCAGCAAGTGCTCTGAACCACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR-3UTR CCA 90 bp | CCACTACCTCTTGCCCTCTACATGTCCACTGGCCATGCACAACCAGGAAGGGGGAGGGCAACAGACTTTTaGAAGCCAAGATCTAAATAC | + |
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Preference number: 2 (lower is better) Translates to: PLPLALYMSTGHAQPGRGRATDF*KPRSKY Trigger: GTATTTAGATCTTGGCTTCCAAAAGTCTGTTGCCCT...CCCCCTTCCTGGTTGTGCATGGCCAGTGGACATGTAGAGGGCAAGAGGTAGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCCAACACCCACGGGATGGCTCACAATCATTAGTTAACTCCAGTTCCAGGGGGCACTTACATATATaGGCAGGCAAAACACTCAAA | + |
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Preference number: 2 (lower is better) Translates to: CFQHPRDGSQSLVNSSSRGHLHI*AGKTLK Trigger: TTTGAGTGTTTTGCCTGCCCATATATGTAAGTGCCC...CCTGGAACTGGAGTTAACTAATGATTGTGAGCCATCCCGTGGGTGTTGGAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR CCA 72 bp | CTCCAACAGGCCGAAAGCCCATACTTCTTTGCCGTGTaGGCCCACATAAGGCACCACAGTGTGCTGTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: LQQAESPYFFAV*AHIRHHSVLCL Trigger: CAGGCACAGCACACTGTGGTGCCTTATGTGGGCCCACACGGCAAAGAAGTATGGGCTTTCGGCCTGTTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR GCA 72 bp | TGGGGCTGGAGAGAGGACTTGGTGGTTCAGAGCACTTaGTGCCTCTGCAGAGGACCTGGGTTTGTTTCCAAC | + |
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Preference number: 3 (lower is better) Translates to: WGWREDLVVQST*CLCRGPGFVSN Trigger: GTTGGAAACAAACCCAGGTCCTCTGCAGAGGCAGCAAGTGCTCTGAACCACCAAGTCCTCTCTCCAGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR GCA 72 bp | ACTATCGGGTCCCTCCCTGATTTGACCACTACCTCTTaGCCTCTACATGTCCACTGGCCATGCACAACCAGG | + |
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Preference number: 3 (lower is better) Translates to: TIGSLPDLTTTS*PLHVHWPCTTR Trigger: CCTGGTTGTGCATGGCCAGTGGACATGTAGAGGGCAAGAGGTAGTGGTCAAATCAGGGAGGGACCCGATAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR CCA 72 bp | TTAACTCCAGTTCCAGGGAACTCTGACATACTCATTTaGCTTCTGTCGGTACCAGGCACACACACGGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: LTPVPGNSDILI*LLSVPGTHTGH Trigger: GTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAAATGAGTATGTCAGAGTTCCCTGGAACTGGAGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR TCA 72 bp | TCACAATCATTAGTTAACTCCAGTTCCAGGGAACTCTaGCATACTCATTTGGCTTCTGTCGGTACCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: SQSLVNSSSREL*HTHLASVGTRH Trigger: GTGCCTGGTACCGACAGAAGCCAAATGAGTATGTCAGAGTTCCCTGGAACTGGAGTTAACTAATGATTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | AGAGCACTTGCTGCCTCTGCAGAGGACCTGGGTTTGTTTCCAACACCCACGGGAGGGCGCATGCAGGCCTaGGCTGTTTGGCCTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: RALAASAEDLGLFPTPTGGRMQA*AVWPQG Trigger: ACCCTGAGGCCAAACAGCTCAGGCCTGCATGCGCCC...TCCCGTGGGTGTTGGAAACAAACCCAGGTCCTCTGCAGAGGCAGCAAGTGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | CTTTGCCGTGTGGGCCCACATAAGGCACCACAGTGTGCTGTGCCTGGGGGCAGGGTGATAGCCTGTGCCTaGGAGTCCTGTTCACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LCRVGPHKAPQCAVPGGRVIACA*ESCSQR Trigger: CCTCTGTGAACAGGACTCTCAGGCACAGGCTATCAC...CCTGCCCCCAGGCACAGCACACTGTGGTGCCTTATGTGGGCCCACACGGCAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR GCA 90 bp | CTGAGCAGGAACCCACATCAGTCCCAGGGACCCTGTAGCCAGCCACACAGATATGAGCGCCTGGGCGCATaGAGGCCTGAGCTGTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LSRNPHQSQGPCSQPHRYERLGA*RPELFG Trigger: GCCAAACAGCTCAGGCCTGCATGCGCCCAGGCGCTC...ATATCTGTGTGGCTGGCTACAGGGTCCCTGGGACTGATGTGGGTTCCTGCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | CCCAGGGACCCTGTAGCCAGCCACACAGATATTACTCCAACAGGCCGAAAGCCCGGCAGACAGCCAGCCTaGGTGGGGACTGTGTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: PRDPVASHTDITPTGRKPGRQPA*VGTVCK Trigger: CTTACACACAGTCCCCACTCAGGCTGGCTGTCTGCC...GGGCTTTCGGCCTGTTGGAGTAATATCTGTGTGGCTGGCTACAGGGTCCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR GCA 90 bp | CTTTGCCGTGTGGGCCCACATAAGGCACCACAGTGTGCTGTGCCTGGGGGCAGGTTGCCAAGGAAGGCTTaGAAGAAGGCTGACTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LCRVGPHKAPQCAVPGGRLPRKA*KKADLP Trigger: GGGCAAGTCAGCCTTCTTGCAAGCCTTCCTTGGCAA...CCTGCCCCCAGGCACAGCACACTGTGGTGCCTTATGTGGGCCCACACGGCAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR GCA 90 bp | CCCAGGGACCCTGTAGCCAGCCACACAGATATTACTCCAACAGGCCGAAAGCCCCAGAAGGAGGTGGGGTaGAGCTCTGTGTGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: PRDPVASHTDITPTGRKPQKEVG*SSVCTR Trigger: CCTGGTGCACACAGAGCTGCACCCCACCTCCTTCTG...GGGCTTTCGGCCTGTTGGAGTAATATCTGTGTGGCTGGCTACAGGGTCCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | TTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCAGGGCAGGATGGTCCACGTaGTCTCGTGCCGGCCACGCT | + |
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Preference number: 4 (lower is better) Translates to: LASVGTRHTHGALTYMGRAGWST*SRAGHA Trigger: AGCGTGGCCGGCACGAGACCACGTGGACCATCCTGC...CCTGCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | AGAGCACTTGCTGCCTCTGCAGAGGACCTGGGTTTGTTTCCAACACCCACGGGATATTGCCCACCAGGATaGTGGGCAACCTGGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RALAASAEDLGLFPTPTGYCPPG*WATWAL Trigger: CAGGGCCCAGGTTGCCCATCATCCTGGTGGGCAATA...TCCCGTGGGTGTTGGAAACAAACCCAGGTCCTCTGCAGAGGCAGCAAGTGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR GCA 90 bp | TTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCAGGGTCCACGTGGTCTCGTaGCGGCCACGCTGGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: LASVGTRHTHGALTYMGRVHVVS*RPRWMK Trigger: CTTCATCCAGCGTGGCCGGCACGAGACCACGTGGAC...CCTGCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR GCA 90 bp | CTGAGCAGGAACCCACATCAGTCCCAGGGACCCTGTAGCCAGCCACACAGATATACGCTGCGCTGTGTCTaGCCTTTCTCCTGGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LSRNPHQSQGPCSQPHRYTLRCV*PFSWSS Trigger: GCTGGACCAGGAGAAAGGGCAGACACAGCGCAGCGT...ATATCTGTGTGGCTGGCTACAGGGTCCCTGGGACTGATGTGGGTTCCTGCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | TTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCAGGCAAAGCGCCGCAGGATaGTCCACGTGGTCTCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LASVGTRHTHGALTYMGRQSAAG*STWSRA Trigger: GGCACGAGACCACGTGGACCATCCTGCGGCGCTTTG...CCTGCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | CTTTGCCGTGTGGGCCCACATAAGGCACCACAGTGTGCTGTGCCTGGGGGCAGGCACCTGAGAACACACTaGAGAGATTCTGTAGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: LCRVGPHKAPQCAVPGGRHLRTH*RDSVVP Trigger: CGGAACTACAGAATCTCTTCAGTGTGTTCTCAGGTG...CCTGCCCCCAGGCACAGCACACTGTGGTGCCTTATGTGGGCCCACACGGCAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | CATTTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCGGCTTGCAAGAAGGCTaGCTTGCCCACTCCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: HLASVGTRHTHGALTYMGGLQEG*LAHSSG Trigger: GCCCGAGGAGTGGGCAAGTCAGCCTTCTTGCAAGCC...GCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | AGCAGGAACCCACATCAGTCCCAGGGACCCTGTAGCCAGCCACACAGATATTACGGAGCCAGAAGGAGGTaGGGTGCAGCTCTGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SRNPHQSQGPCSQPHRYYGARRR*GAALCA Trigger: TGCACACAGAGCTGCACCCCACCTCCTTCTGGCTCC...GTAATATCTGTGTGGCTGGCTACAGGGTCCCTGGGACTGATGTGGGTTCCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | TTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCAGGCCTCAAGTGCTTGGCTaGACACTCCACGCAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LASVGTRHTHGALTYMGRPQVLG*TLHAGL Trigger: GAGACCTGCGTGGAGTGTTCAGCCAAGCACTTGAGG...CCTGCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | TTGGTGGTTCAGAGCACTTGCTGCCTCTGCAGAGGACCTGGGTTTGTTTCCAACGGTAGCCACGATGGTTaGGCTCTGTGCTGCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LVVQSTCCLCRGPGFVSNGSHDG*ALCCSQ Trigger: CTGGCTGCAGCACAGAGCTCAACCATCGTGGCTACC...GTTGGAAACAAACCCAGGTCCTCTGCAGAGGCAGCAAGTGCTCTGAACCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | TGGAAGCCAAGATCTAAATACCAAGTTCCTGAGCAGGAACCCACATCAGTCCCAGACGTCTTCCCCACCTaGGCCTCGCCCAGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: WKPRSKYQVPEQEPTSVPDVFPT*ASPSSR Trigger: CCTGCTGCTGGGCGAGGCCCAGGTGGGGAAGACGTC...TGGGACTGATGTGGGTTCCTGCTCAGGAACTTGGTATTTAGATCTTGGCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | TGGAAGCCAAGATCTAAATACCAAGTTCCTGAGCAGGAACCCACATCAGTCCCAGCACCTTCTCCGGGGTaGCGTCGGCGGGGATGGTTA | + |
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Preference number: 4 (lower is better) Translates to: WKPRSKYQVPEQEPTSVPAPSPG*RRRGWL Trigger: TAACCATCCCCGCCGACGTCACCCCGGAGAAGGTGC...TGGGACTGATGTGGGTTCCTGCTCAGGAACTTGGTATTTAGATCTTGGCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | CTGAGCAGGAACCCACATCAGTCCCAGGGACCCTGTAGCCAGCCACACAGATATCATCCAAGTAGGTCATaGGGGTCCACTGGCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: LSRNPHQSQGPCSQPHRYHPSRS*GSTGRD Trigger: ATCTCTGCCAGTGGACCCTCATGACCTACTTGGATG...ATATCTGTGTGGCTGGCTACAGGGTCCCTGGGACTGATGTGGGTTCCTGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR GCA 90 bp | TTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCAGGATCTGTGCTGGGCATTaGGGGTCCCAAGCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LASVGTRHTHGALTYMGRICAGH*GSQAGE Trigger: TTCTCCTGCTTGGGACCCGCAATGCCCAGCACAGAT...CCTGCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | CCACTACCTCTTGCCCTCTACATGTCCACTGGCCATGCACAACCAGGAAGGGGGCAAGCGGGATCCACTTaGTTCGGATCTTCTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: PLPLALYMSTGHAQPGRGQAGST*FGSSQW Trigger: CCATTGAGAAGATCCGAACCAAGTGGATCCCGCTTG...CCCCCTTCCTGGTTGTGCATGGCCAGTGGACATGTAGAGGGCAAGAGGTAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | AGATCTAAATACCAAGTTCCTGAGCAGGAACCCACATCAGTCCCAGGGACCCTGTGTGGGGCCAGGGGATaGCCAAAGCAGGACTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RSKYQVPEQEPTSVPGTLCGARG*PKQDFW Trigger: CCAGAAGTCCTGCTTTGGCCATCCCCTGGCCCCACA...CAGGGTCCCTGGGACTGATGTGGGTTCCTGCTCAGGAACTTGGTATTTAGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | CATTTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCGTCTGCCCTTTCTCCTaGTCCAGCTTCTTCTCGCGG | + |
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Preference number: 4 (lower is better) Translates to: HLASVGTRHTHGALTYMGVCPFS*SSFFSR Trigger: CCGCGAGAAGAAGCTGGACCAGGAGAAAGGGCAGAC...GCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | CTTTGCCGTGTGGGCCCACATAAGGCACCACAGTGTGCTGTGCCTGGGGGCAGGAGTGTACAAAGGTCTTaGGATCACTGCTGTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: LCRVGPHKAPQCAVPGGRSVQRS*DHCCQT Trigger: TGTTTGACAGCAGTGATCCCAAGACCTTTGTACACT...CCTGCCCCCAGGCACAGCACACTGTGGTGCCTTATGTGGGCCCACACGGCAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | TTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCAGGGCCCCATGGAGCACCTaGGAACACACTGAAGAGATT | + |
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Preference number: 4 (lower is better) Translates to: LASVGTRHTHGALTYMGRAPWST*EHTEEI Trigger: AATCTCTTCAGTGTGTTCTCAGGTGCTCCATGGGGC...CCTGCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR GCA 90 bp | TTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCAGGCTTCCCCAAGGCTGTTaGCAAGGAAGGCTTGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LASVGTRHTHGALTYMGRLPQGC*QGRLAR Trigger: TCTTGCAAGCCTTCCTTGGCAACAGCCTTGGGGAAG...CCTGCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR GCA 90 bp | AGCAGGAACCCACATCAGTCCCAGGGACCCTGTAGCCAGCCACACAGATATTACATCAGGTACTTCTCCTaGCCGTTGACCCGCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRNPHQSQGPCSQPHRYYIRYFS*PLTRTV Trigger: TACAGTGCGGGTCAACGGGCAGGAGAAGTACCTGAT...GTAATATCTGTGTGGCTGGCTACAGGGTCCCTGGGACTGATGTGGGTTCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR GCA 90 bp | TGGAAAAGACAAGTGAAATTTAATCAGGAAAGTCAGTTCCGCTTGCTCTGCAGCGGGGCAGGCAGCCGGTaGCTCCGGCAGAACTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: WKRQVKFNQESQFRLLCSGAGSR*LRQNSA Trigger: CGCTGAGTTCTGCCGGAGGCACCGGCTGCCTGCCCC...GCTGCAGAGCAAGCGGAACTGACTTTCCTGATTAAATTTCACTTGTCTTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR GCA 90 bp | AGATCTAAATACCAAGTTCCTGAGCAGGAACCCACATCAGTCCCAGGGACCCTGGGGTGCAGCTCTGTGTaGACCAGGTGTGGGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSKYQVPEQEPTSVPGTLGCSSV*TRCGKV Trigger: CACTTTCCCACACCTGGTGCACACAGAGCTGCACCC...CAGGGTCCCTGGGACTGATGTGGGTTCCTGCTCAGGAACTTGGTATTTAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | CCCAGGGACCCTGTAGCCAGCCACACAGATATTACTCCAACAGGCCGAAAGCCCTCTATCTCAGGAAACTaGCTCATGATGGGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PRDPVASHTDITPTGRKPSISGN*LMMGST Trigger: TGTGCTGCCCATCATGAGCCAGTTTCCTGAGATAGA...GGGCTTTCGGCCTGTTGGAGTAATATCTGTGTGGCTGGCTACAGGGTCCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | AGATCTAAATACCAAGTTCCTGAGCAGGAACCCACATCAGTCCCAGGGACCCTGTCGTGCCGGCCACGCTaGATGAAGAGTGTGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSKYQVPEQEPTSVPGTLSCRPR*MKSVFR Trigger: CCTGAACACACTCTTCATCCAGCGTGGCCGGCACGA...CAGGGTCCCTGGGACTGATGTGGGTTCCTGCTCAGGAACTTGGTATTTAGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | TTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCAGGTTGTGGATCTCCTCCTaGAGTTCTTCCTCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LASVGTRHTHGALTYMGRLWISS*SSSSVC Trigger: GCAGACAGAGGAAGAACTTCAGGAGGAGATCCACAA...CCTGCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR GCA 90 bp | TTCCTGAGCAGGAACCCACATCAGTCCCAGGGACCCTGTAGCCAGCCACACAGAAGGTCTTGGGATCACTaGTGTCAAACATTAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSRNPHQSQGPCSQPHRRSWDH*CQTLSR Trigger: CCTGCTTAATGTTTGACAGCAGTGATCCCAAGACCT...TCTGTGTGGCTGGCTACAGGGTCCCTGGGACTGATGTGGGTTCCTGCTCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | TTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCAGGTATTCCTCAAGTGCTTaGCTGAACACTCCACGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LASVGTRHTHGALTYMGRYSSSA*LNTPRR Trigger: CCTGCGTGGAGTGTTCAGCCAAGCACTTGAGGAATA...CCTGCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | TTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCAGGCCAAAGCAGGACTTCTaGAAGGCATTGAGTTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LASVGTRHTHGALTYMGRPKQDF*KALSSS Trigger: CGAGGAACTCAATGCCTTCCAGAAGTCCTGCTTTGG...CCTGCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | CATTTGGCTTCTGTCGGTACCAGGCACACACACGGGGCACTTACATATATGGGCGAGAGGACACCATCATaGTCCTGGTCATGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HLASVGTRHTHGALTYMGERTPS*SWSCFS Trigger: CGAGAAGCATGACCAGGACCATGATGGTGTCCTCTC...GCCCATATATGTAAGTGCCCCGTGTGTGTGCCTGGTACCGACAGAAGCCAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR CAA 72 bp | TTCAGAGCACTTGCTGCCTCTGCAGAGGACCTGGGTTaGTTTCCAACACCCACGGGATGGCTCACAATCATT | + |
|
Preference number: 4 (lower is better) Translates to: FRALAASAEDLG*FPTPTGWLTII Trigger: AATGATTGTGAGCCATCCCGTGGGTGTTGGAAACAAACCCAGGTCCTCTGCAGAGGCAGCAAGTGCTCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | TGGAAAAGACAAGTGAAATTTAATCAGGAAAGTCAGTTCCGCTTGCTCTGCAGCGGGGACATGGAGCGCTaGATAGAGGTAGTCGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: WKRQVKFNQESQFRLLCSGDMER*IEVVGR Trigger: ACGCCCGACTACCTCTATCCAGCGCTCCATGTCCCC...GCTGCAGAGCAAGCGGAACTGACTTTCCTGATTAAATTTCACTTGTCTTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| 3UTR CAA 72 bp | AGACAAGTGAAATTTAATCAGGAAAGTCAGTTCCGCTaGCTCTGCAGCTGGCGCAGTGTGGATAAGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQVKFNQESQFR*LCSWRSVDKAP Trigger: TGGAGCCTTATCCACACTGCGCCAGCTGCAGAGCAAGCGGAACTGACTTTCCTGATTAAATTTCACTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | TGGAAAAGACAAGTGAAATTTAATCAGGAAAGTCAGTTCCGCTTGCTCTGCAGCACTTCTGGAAGGCATTaGGTTCCTCGTCGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WKRQVKFNQESQFRLLCSTSGRH*VPRRSA Trigger: GGCTGAGCGACGAGGAACTCAATGCCTTCCAGAAGT...GCTGCAGAGCAAGCGGAACTGACTTTCCTGATTAAATTTCACTTGTCTTTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | TGGAAAAGACAAGTGAAATTTAATCAGGAAAGTCAGTTCCGCTTGCTCTGCAGCGACAGCCAGCCTGAGTaGGGACTGTGTGTAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WKRQVKFNQESQFRLLCSDSQPE*GLCVRV Trigger: AACTCTTACACACAGTCCCCACTCAGGCTGGCTGTC...GCTGCAGAGCAAGCGGAACTGACTTTCCTGATTAAATTTCACTTGTCTTTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CCA 90 bp | TGGAAAAGACAAGTGAAATTTAATCAGGAAAGTCAGTTCCGCTTGCTCTGCAGCGGATCTTCTCAATGGTaGTCTCCTCAGACACATCGT | + |
|
Preference number: 4 (lower is better) Translates to: WKRQVKFNQESQFRLLCSGSSQW*SPQTHR Trigger: ACGATGTGTCTGAGGAGACCACCATTGAGAAGATCC...GCTGCAGAGCAAGCGGAACTGACTTTCCTGATTAAATTTCACTTGTCTTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR TCA 90 bp | TGGAAAAGACAAGTGAAATTTAATCAGGAAAGTCAGTTCCGCTTGCTCTGCAGCATAGTAGAACAGCTCTaGGATATTCCTCAAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WKRQVKFNQESQFRLLCSIVEQL*DIPQVL Trigger: AAGCACTTGAGGAATATCTCAGAGCTGTTCTACTAT...GCTGCAGAGCAAGCGGAACTGACTTTCCTGATTAAATTTCACTTGTCTTTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 90 bp | CAGCCGTGCCGACAGCCACCAGCACTCCTCGGAGCCAGAAGGAGGTaGGGTGCAGCTCTGTGTGCACCAGGTGTGGGAAAGTGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: QPCRQPPALLGARRR*GAALCAPGVGKWPW Trigger: CCATGGCCACTTTCCCACACCTGGTGCACACAGAGCTGCACCCCACCTCCTTCTGGCTCCGAGGAGTGCTGGTGGCTGTCGGCACGGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS TCA 90 bp | GCTCCGCTGAGTAATCCACGATATGAGTGGGCACCTTCTCCGGGGTaGCGTCGGCGGGGATGGTTATCTCCTCCGCGCGGGCAGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: APLSNPRYEWAPSPG*RRRGWLSPPRGQGP Trigger: AGGTCCCTGCCCGCGCGGAGGAGATAACCATCCCCGCCGACGTCACCCCGGAGAAGGTGCCCACTCATATCGTGGATTACTCAGCGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176709.2 |
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| CDS TCA 90 bp | CCATGGTACTCCCCGGCCGCAGGTCAGACTTATTGCCCACCAGGATaGTGGGCAACCTGGGCCCTGTCGCCGTCCTGCCATTCACAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PWYSPAAGQTYCPPG*WATWALSPSCHSQA Trigger: CGCTTGTGAATGGCAGGACGGCGACAGGGCCCAGGTTGCCCATCATCCTGGTGGGCAATAAGTCTGACCTGCGGCCGGGGAGTACCATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043897.16 ENSMUST00000176591.8 |
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| CDS TCA 90 bp | AGCGCCGCAGGATGGTCCACGTGGTCTCGTGCCGGCCACGCTGGATaGAGAGTGTGTTCAGGAAGAGGAAGCCTTCCAGGGTCAGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SAAGWSTWSRAGHAG*RVCSGRGSLPGSAG Trigger: ACCGGCTGACCCTGGAAGGCTTCCTCTTCCTGAACACACTCTTCATCCAGCGTGGCCGGCACGAGACCACGTGGACCATCCTGCGGCGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS TCA 90 bp | GGTAAAGACATCTGTGCTGGGCATTGCGGGTCCCAAGCAGGAGAATaGAGCTGGGGCAGGCAGCCGGTGCCTCCGGCAGAACTCAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GKDICAGHCGSQAGE*SWGRQPVPPAELSG Trigger: CCCGCTGAGTTCTGCCGGAGGCACCGGCTGCCTGCCCCAGCTTCATTCTCCTGCTTGGGACCCGCAATGCCCAGCACAGATGTCTTTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS GCA 90 bp | GTGCCGACAGCCACCAGCACTCCTCGGAGCCAGAAGGAGGTGGGGTaGAGCTCTGTGTGCACCAGGTGTGGGAAAGTGGCCATGGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPTATSTPRSQKEVG*SSVCTRCGKVAMVA Trigger: TGCTACCATGGCCACTTTCCCACACCTGGTGCACACAGAGCTGCACCCCACCTCCTTCTGGCTCCGAGGAGTGCTGGTGGCTGTCGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 90 bp | TGGAAGGCATTGAGTTCCTCGTCGCTCAGCCCGTGGTCTCGGTCCTaGTCCGACAGCCTGAAGATGCGTGTGAGCGCCTGGGCGCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: WKALSSSSLSPWSRS*SDSLKMRVSAWAHA Trigger: TGCATGCGCCCAGGCGCTCACACGCATCTTCAGGCTGTCGGACCAGGACCGAGACCACGGGCTGAGCGACGAGGAACTCAATGCCTTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 90 bp | GCGCATGCAGGCCTGAGCTCCACGCAGGTCTCTATCTCAGGAAACTaGCTCATGATGGGCAGCACAGCCTCCATGGTACTCCCCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AHAGLSSTQVSISGN*LMMGSTASMVLPGR Trigger: GCGGCCGGGGAGTACCATGGAGGCTGTGCTGCCCATCATGAGCCAGTTTCCTGAGATAGAGACCTGCGTGGAGCTCAGGCCTGCATGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176591.8 |
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| CDS CCA 90 bp | TGGTCTCGGTCCTGGTCCGACAGCCTGAAGATGCGTGTGAGCGCCTaGGCGCATGCAGGCCTGAGCTCCACGCAGGTCTCTATCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WSRSWSDSLKMRVSA*AHAGLSSTQVSISG Trigger: TCCTGAGATAGAGACCTGCGTGGAGCTCAGGCCTGCATGCGCCCAGGCGCTCACACGCATCTTCAGGCTGTCGGACCAGGACCGAGACCA 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176591.8 |
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| CDS GCA 90 bp | CTTCCAGGGTCAGCCGGTCATTCTGCACACCACCTGACACGTTCTTaGACACCACCCTCTTCACATCCTCCAGGGCCTGTGGGGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGSAGHSAHHLTRS*TPPSSHPPGPVGPG Trigger: CCCTGGCCCCACAGGCCCTGGAGGATGTGAAGAGGGTGGTGTGCAAGAACGTGTCAGGTGGTGTGCAGAATGACCGGCTGACCCTGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 90 bp | CCAAAGCGCCGCAGGATGGTCCACGTGGTCTCGTGCCGGCCACGCTaGATGAAGAGTGTGTTCAGGAAGAGGAAGCCTTCCAGGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PKRRRMVHVVSCRPR*MKSVFRKRKPSRVS Trigger: GCTGACCCTGGAAGGCTTCCTCTTCCTGAACACACTCTTCATCCAGCGTGGCCGGCACGAGACCACGTGGACCATCCTGCGGCGCTTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 90 bp | AAGCAGGACTTCTGGAAGGCATTGAGTTCCTCGTCGCTCAGCCCGTaGTCTCGGTCCTGGTCCGACAGCCTGAAGATGCGTGTGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: KQDFWKALSSSSLSP*SRSWSDSLKMRVSA Trigger: GGCGCTCACACGCATCTTCAGGCTGTCGGACCAGGACCGAGACCACGGGCTGAGCGACGAGGAACTCAATGCCTTCCAGAAGTCCTGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 90 bp | CACACCACCCTCTTCACATCCTCCAGGGCCTGTGGGGCCAGGGGATaGCCAAAGCAGGACTTCTGGAAGGCATTGAGTTCCTCGTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTTLFTSSRACGARG*PKQDFWKALSSSSL Trigger: GAGCGACGAGGAACTCAATGCCTTCCAGAAGTCCTGCTTTGGCCATCCCCTGGCCCCACAGGCCCTGGAGGATGTGAAGAGGGTGGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS TCA 90 bp | TGGCTGAACACTCCACGCAGGTCTCTATCTCAGGAAACTGGCTCATaGTGGGCAGCACAGCCTCCATGGTACTCCCCGGCCGCAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: WLNTPRRSLSQETGS*WAAQPPWYSPAAGQ Trigger: CTGACCTGCGGCCGGGGAGTACCATGGAGGCTGTGCTGCCCATCATGAGCCAGTTTCCTGAGATAGAGACCTGCGTGGAGTGTTCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS TCA 90 bp | GAAGAGGAAGCCTTCCAGGGTCAGCCGGTCATTCTGCACACCACCTaGCACGTTCTTGCACACCACCCTCTTCACATCCTCCAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EEEAFQGQPVILHTT*HVLAHHPLHILQGL Trigger: CAGGCCCTGGAGGATGTGAAGAGGGTGGTGTGCAAGAACGTGTCAGGTGGTGTGCAGAATGACCGGCTGACCCTGGAAGGCTTCCTCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 90 bp | AAGTGCTTGGCTGAACACTCCACGCAGGTCTCTATCTCAGGAAACTaGCTCATGATGGGCAGCACAGCCTCCATGGTACTCCCCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KCLAEHSTQVSISGN*LMMGSTASMVLPGR Trigger: GCGGCCGGGGAGTACCATGGAGGCTGTGCTGCCCATCATGAGCCAGTTTCCTGAGATAGAGACCTGCGTGGAGTGTTCAGCCAAGCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CAA 90 bp | CTTTGCCGTGTGGGCCCACATAAGGCACCACAGTGTGCTGTGCCTGGGGGCAGGAAGGTGTGCAAGGCATaGCTGGACATCCAAGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LCRVGPHKAPQCAVPGGRKVCKA*LDIQVG Trigger: ACCTACTTGGATGTCCAGCAATGCCTTGCACACCTT...CCTGCCCCCAGGCACAGCACACTGTGGTGCCTTATGTGGGCCCACACGGCAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CAA 90 bp | CCACTACCTCTTGCCCTCTACATGTCCACTGGCCATGCACAACCAGGAAGGGGGGCTTCCCCAAGGCTGTaGCCAAGGAAGGCTTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLPLALYMSTGHAQPGRGASPRL*PRKACK Trigger: CTTGCAAGCCTTCCTTGGCAACAGCCTTGGGGAAGC...CCCCCTTCCTGGTTGTGCATGGCCAGTGGACATGTAGAGGGCAAGAGGTAGTGG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 90 bp | TCCACTGGCAGAGATAGCCATGCAAAGGCAGACAGCCAGCCTGAGTaGGGACTGTGTGTAAGAGTTCAGGGCCCCATGGAGCACCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: STGRDSHAKADSQPE*GLCVRVQGPMEHLR Trigger: TCTCAGGTGCTCCATGGGGCCCTGAACTCTTACACACAGTCCCCACTCAGGCTGGCTGTCTGCCTTTGCATGGCTATCTCTGCCAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 90 bp | AGCTCTGTGTGCACCAGGTGTGGGAAAGTGGCCATGGTAGCAAGTTaGGTAAAGACATCTGTGCTGGGCATTGCGGGTCCCAAGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVCTRCGKVAMVAS*VKTSVLGIAGPKQE Trigger: CTCCTGCTTGGGACCCGCAATGCCCAGCACAGATGTCTTTACCCAACTTGCTACCATGGCCACTTTCCCACACCTGGTGCACACAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 90 bp | TCGGAGCCAGAAGGAGGTGGGGTGCAGCTCTGTGTGCACCAGGTGTaGGAAAGTGGCCATGGTAGCAAGTTGGGTAAAGACATCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SEPEGGGVQLCVHQV*ESGHGSKLGKDICA Trigger: AGCACAGATGTCTTTACCCAACTTGCTACCATGGCCACTTTCCCACACCTGGTGCACACAGAGCTGCACCCCACCTCCTTCTGGCTCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS GCA 90 bp | AGTGTGTTCAGGAAGAGGAAGCCTTCCAGGGTCAGCCGGTCATTCTaGACACCACCTGACACGTTCTTGCACACCACCCTCTTCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: SVFRKRKPSRVSRSF*TPPDTFLHTTLFTS Trigger: GGATGTGAAGAGGGTGGTGTGCAAGAACGTGTCAGGTGGTGTGCAGAATGACCGGCTGACCCTGGAAGGCTTCCTCTTCCTGAACACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS GCA 90 bp | AGAGTCCTGTTCACAGAGGGTAGGGTAACCCAGGTAGCCAAGGTGTaGAAGGCATTGCTGGACATCCAAGTAGGTCATGAGGGTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RVLFTEGRVTQVAKV*KALLDIQVGHEGPL Trigger: CAGTGGACCCTCATGACCTACTTGGATGTCCAGCAATGCCTTGCACACCTTGGCTACCTGGGTTACCCTACCCTCTGTGAACAGGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CAA 90 bp | TGTTTCCAACACCCACGGGATGGCTCACAATCATTAGTTAACTCCAGTTCCAGGTGCAAGAAGGCTGACTaGCCCACTCCTCGGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CFQHPRDGSQSLVNSSSRCKKAD*PTPRAP Trigger: GGGAGCCCGAGGAGTGGGCAAGTCAGCCTTCTTGCA...CCTGGAACTGGAGTTAACTAATGATTGTGAGCCATCCCGTGGGTGTTGGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS TCA 90 bp | CTGTGTGTAAGAGTTCAGGGCCCCATGGAGCACCTGAGAACACACTaGAGAGATTCTGTAGTTCCGTGGGCGAGAGGACACCATCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LCVRVQGPMEHLRTH*RDSVVPWARGHHHG Trigger: ACCATGATGGTGTCCTCTCGCCCACGGAACTACAGAATCTCTTCAGTGTGTTCTCAGGTGCTCCATGGGGCCCTGAACTCTTACACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS GCA 90 bp | AGCAGGCTGTCAGCATTCACTTCACACAGAATCAGGTACTTCTCCTaGCCGTTGACCCGCACTGTATTGATGGTATGCAGGGGGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRLSAFTSHRIRYFS*PLTRTVLMVCRGNF Trigger: GAAATTCCCCCTGCATACCATCAATACAGTGCGGGTCAACGGGCAGGAGAAGTACCTGATTCTGTGTGAAGTGAATGCTGACAGCCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS-3UTR CAA 90 bp | TGTTTCCAACACCCACGGGATGGCTCACAATCATTAGTTAACTCCAGTTCCAGGTTGACCCGCACTGTATaGATGGTATGCAGGGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CFQHPRDGSQSLVNSSSRLTRTV*MVCRGN Trigger: ATTCCCCCTGCATACCATCAATACAGTGCGGGTCAA...CCTGGAACTGGAGTTAACTAATGATTGTGAGCCATCCCGTGGGTGTTGGAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
||
| CDS GCA 72 bp | CCCAAGCAGGAGAATGAAGCTGGGGCAGGCAGCCGGTaGCTCCGGCAGAACTCAGCGGGTGACAGCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PKQENEAGAGSR*LRQNSAGDSPG Trigger: CCCAGGGCTGTCACCCGCTGAGTTCTGCCGGAGGCACCGGCTGCCTGCCCCAGCTTCATTCTCCTGCTTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS GCA 72 bp | GCCACCAGCACTCCTCGGAGCCAGAAGGAGGTGGGGTaGAGCTCTGTGTGCACCAGGTGTGGGAAAGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ATSTPRSQKEVG*SSVCTRCGKVA Trigger: GGCCACTTTCCCACACCTGGTGCACACAGAGCTGCACCCCACCTCCTTCTGGCTCCGAGGAGTGCTGGTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 72 bp | TCCTGGTCCGACAGCCTGAAGATGCGTGTGAGCGCCTaGGCGCATGCAGGCCTGAGCTGTTTGGCCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SWSDSLKMRVSA*AHAGLSCLASG Trigger: CCCTGAGGCCAAACAGCTCAGGCCTGCATGCGCCCAGGCGCTCACACGCATCTTCAGGCTGTCGGACCAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 72 bp | TCCTGGTCCGACAGCCTGAAGATGCGTGTGAGCGCCTaGGCGCATGCAGGCCTGAGCTCCACGCAGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SWSDSLKMRVSA*AHAGLSSTQVS Trigger: AGAGACCTGCGTGGAGCTCAGGCCTGCATGCGCCCAGGCGCTCACACGCATCTTCAGGCTGTCGGACCAGGA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176591.8 |
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| CDS CAA 90 bp | GCCTGTGGGGCCAGGGGATGGCCAAAGCAGGACTTCTGGAAGGCATaGAGTTCCTCGTCGCTCAGCCCGTGGTCTCGGTCCTGGTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: ACGARGWPKQDFWKA*SSSSLSPWSRSWSD Trigger: GTCGGACCAGGACCGAGACCACGGGCTGAGCGACGAGGAACTCAATGCCTTCCAGAAGTCCTGCTTTGGCCATCCCCTGGCCCCACAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS GCA 72 bp | CGACAGCCTGAAGATGCGTGTGAGCGCCTGGGCGCATaGAGGCCTGAGCTCCACGCAGGTCTCTATCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RQPEDACERLGA*RPELHAGLYLR Trigger: CCTGAGATAGAGACCTGCGTGGAGCTCAGGCCTGCATGCGCCCAGGCGCTCACACGCATCTTCAGGCTGTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176591.8 |
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| CDS CCA 72 bp | TTGAGTTCCTCGTCGCTCAGCCCGTGGTCTCGGTCCTaGTCCGACAGCCTGAAGATGCGTGTGAGCGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSSSSLSPWSRS*SDSLKMRVSAW Trigger: CCAGGCGCTCACACGCATCTTCAGGCTGTCGGACCAGGACCGAGACCACGGGCTGAGCGACGAGGAACTCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043897.16 ENSMUST00000176591.8 |
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| CDS CCA 72 bp | GCCTGTGGGGCCAGGGGATGGCCAAAGCAGGACTTCTaGAAGGCATTGAGTTCCTCGTCGCTCAGCCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: ACGARGWPKQDF*KALSSSSLSPW Trigger: CCACGGGCTGAGCGACGAGGAACTCAATGCCTTCCAGAAGTCCTGCTTTGGCCATCCCCTGGCCCCACAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CAA 90 bp | CCTTCCAGGGTCAGCCGGTCATTCTGCACACCACCTGACACGTTCTaGCACACCACCCTCTTCACATCCTCCAGGGCCTGTGGGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PSRVSRSFCTPPDTF*HTTLFTSSRACGAR Trigger: CCTGGCCCCACAGGCCCTGGAGGATGTGAAGAGGGTGGTGTGCAAGAACGTGTCAGGTGGTGTGCAGAATGACCGGCTGACCCTGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS TCA 72 bp | AGTAATCCACGATATGAGTGGGCACCTTCTCCGGGGTaGCGTCGGCGGGGATGGTTATCTCCTCCGCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: SNPRYEWAPSPG*RRRGWLSPPRG Trigger: CCCGCGCGGAGGAGATAACCATCCCCGCCGACGTCACCCCGGAGAAGGTGCCCACTCATATCGTGGATTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043897.16 ENSMUST00000176591.8 ENSMUST00000176709.2 |
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| CDS CAA 72 bp | GCCAGGGGATGGCCAAAGCAGGACTTCTGGAAGGCATaGAGTTCCTCGTCGCTCAGCCCGTGGTCTCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: ARGWPKQDFWKA*SSSSLSPWSRS Trigger: GGACCGAGACCACGGGCTGAGCGACGAGGAACTCAATGCCTTCCAGAAGTCCTGCTTTGGCCATCCCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS TCA 72 bp | GGATGGTCCACGTGGTCTCGTGCCGGCCACGCTGGATaGAGAGTGTGTTCAGGAAGAGGAAGCCTTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GWSTWSRAGHAG*RVCSGRGSLPG Trigger: CCCTGGAAGGCTTCCTCTTCCTGAACACACTCTTCATCCAGCGTGGCCGGCACGAGACCACGTGGACCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS GCA 72 bp | CGACAGCCTGAAGATGCGTGTGAGCGCCTGGGCGCATaGAGGCCTGAGCTGTTTGGCCTCAGGGTCATAAAG | + |
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Preference number: 6 (lower is better) Translates to: RQPEDACERLGA*RPELFGLRVIK Trigger: CTTTATGACCCTGAGGCCAAACAGCTCAGGCCTGCATGCGCCCAGGCGCTCACACGCATCTTCAGGCTGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 72 bp | CGCAGGATGGTCCACGTGGTCTCGTGCCGGCCACGCTaGATGAAGAGTGTGTTCAGGAAGAGGAAGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RRMVHVVSCRPR*MKSVFRKRKPS Trigger: GGAAGGCTTCCTCTTCCTGAACACACTCTTCATCCAGCGTGGCCGGCACGAGACCACGTGGACCATCCTGCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS TCA 72 bp | ACTTGCCCACTCCTCGGGCTCCCAGCACCTTACACATaGGAACGCTGCGCTGTGTCTGCCCTTTCTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: TCPLLGLPAPYT*ERCAVSALSPG Trigger: ACCAGGAGAAAGGGCAGACACAGCGCAGCGTTCTCATGTGTAAGGTGCTGGGAGCCCGAGGAGTGGGCAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 72 bp | TTCTGGAAGGCATTGAGTTCCTCGTCGCTCAGCCCGTaGTCTCGGTCCTGGTCCGACAGCCTGAAGATGCGT | + |
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Preference number: 6 (lower is better) Translates to: FWKALSSSSLSP*SRSWSDSLKMR Trigger: ACGCATCTTCAGGCTGTCGGACCAGGACCGAGACCACGGGCTGAGCGACGAGGAACTCAATGCCTTCCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS TCA 72 bp | GCCTTCCAGGGTCAGCCGGTCATTCTGCACACCACCTaGCACGTTCTTGCACACCACCCTCTTCACATCCTC | + |
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Preference number: 6 (lower is better) Translates to: AFQGQPVILHTT*HVLAHHPLHIL Trigger: GAGGATGTGAAGAGGGTGGTGTGCAAGAACGTGTCAGGTGGTGTGCAGAATGACCGGCTGACCCTGGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS GCA 72 bp | TCAGCCGGTCATTCTGCACACCACCTGACACGTTCTTaGACACCACCCTCTTCACATCCTCCAGGGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SAGHSAHHLTRS*TPPSSHPPGPV Trigger: CACAGGCCCTGGAGGATGTGAAGAGGGTGGTGTGCAAGAACGTGTCAGGTGGTGTGCAGAATGACCGGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS GCA 72 bp | AGGAAGAGGAAGCCTTCCAGGGTCAGCCGGTCATTCTaGACACCACCTGACACGTTCTTGCACACCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: RKRKPSRVSRSF*TPPDTFLHTTL Trigger: GAGGGTGGTGTGCAAGAACGTGTCAGGTGGTGTGCAGAATGACCGGCTGACCCTGGAAGGCTTCCTCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 72 bp | GGCCTGAGCTCCACGCAGGTCTCTATCTCAGGAAACTaGCTCATGATGGGCAGCACAGCCTCCATGGTACTC | + |
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Preference number: 6 (lower is better) Translates to: GLSSTQVSISGN*LMMGSTASMVL Trigger: GAGTACCATGGAGGCTGTGCTGCCCATCATGAGCCAGTTTCCTGAGATAGAGACCTGCGTGGAGCTCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176591.8 |
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| CDS CAA 72 bp | AGGCTGTTGCCAAGGAAGGCTTGCAAGAAGGCTGACTaGCCCACTCCTCGGGCTCCCAGCACCTTACACATG | + |
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Preference number: 6 (lower is better) Translates to: RLLPRKACKKAD*PTPRAPSTLHM Trigger: CATGTGTAAGGTGCTGGGAGCCCGAGGAGTGGGCAAGTCAGCCTTCTTGCAAGCCTTCCTTGGCAACAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CAA 90 bp | AACCTGGGCCCTGTCGCCGTCCTGCCATTCACAAGCGGGATCCACTaGGTTCGGATCTTCTCAATGGTGGTCTCCTCAGACACATCGTAC | + |
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Preference number: 6 (lower is better) Translates to: NLGPVAVLPFTSGIH*VRIFSMVVSSDTSY Trigger: GTACGATGTGTCTGAGGAGACCACCATTGAGAAGATCCGAACCAAGTGGATCCCGCTTGTGAATGGCAGGACGGCGACAGGGCCCAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043897.16 ENSMUST00000176591.8 ENSMUST00000176709.2 |
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| CDS CAA 90 bp | CAGCTCTGTGTGCACCAGGTGTGGGAAAGTGGCCATGGTAGCAAGTaGGGTAAAGACATCTGTGCTGGGCATTGCGGGTCCCAAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: QLCVHQVWESGHGSK*GKDICAGHCGSQAG Trigger: TCCTGCTTGGGACCCGCAATGCCCAGCACAGATGTCTTTACCCAACTTGCTACCATGGCCACTTTCCCACACCTGGTGCACACAGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 72 bp | AGAGATAGCCATGCAAAGGCAGACAGCCAGCCTGAGTaGGGACTGTGTGTAAGAGTTCAGGGCCCCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: RDSHAKADSQPE*GLCVRVQGPME Trigger: CTCCATGGGGCCCTGAACTCTTACACACAGTCCCCACTCAGGCTGGCTGTCTGCCTTTGCATGGCTATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 72 bp | TGCACCAGGTGTGGGAAAGTGGCCATGGTAGCAAGTTaGGTAAAGACATCTGTGCTGGGCATTGCGGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: CTRCGKVAMVAS*VKTSVLGIAGP Trigger: GGGACCCGCAATGCCCAGCACAGATGTCTTTACCCAACTTGCTACCATGGCCACTTTCCCACACCTGGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 72 bp | GAAGGAGGTGGGGTGCAGCTCTGTGTGCACCAGGTGTaGGAAAGTGGCCATGGTAGCAAGTTGGGTAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: EGGGVQLCVHQV*ESGHGSKLGKD Trigger: GTCTTTACCCAACTTGCTACCATGGCCACTTTCCCACACCTGGTGCACACAGAGCTGCACCCCACCTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CAA 72 bp | CCTGTCGCCGTCCTGCCATTCACAAGCGGGATCCACTaGGTTCGGATCTTCTCAATGGTGGTCTCCTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: PVAVLPFTSGIH*VRIFSMVVSSD Trigger: GTCTGAGGAGACCACCATTGAGAAGATCCGAACCAAGTGGATCCCGCTTGTGAATGGCAGGACGGCGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043897.16 ENSMUST00000176591.8 ENSMUST00000176709.2 |
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| CDS CAA 72 bp | GTGCACCAGGTGTGGGAAAGTGGCCATGGTAGCAAGTaGGGTAAAGACATCTGTGCTGGGCATTGCGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: VHQVWESGHGSK*GKDICAGHCGS Trigger: GGACCCGCAATGCCCAGCACAGATGTCTTTACCCAACTTGCTACCATGGCCACTTTCCCACACCTGGTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 72 bp | CTGTCGCCGTCCTGCCATTCACAAGCGGGATCCACTTaGTTCGGATCTTCTCAATGGTGGTCTCCTCAGACA | + |
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Preference number: 6 (lower is better) Translates to: LSPSCHSQAGST*FGSSQWWSPQT Trigger: TGTCTGAGGAGACCACCATTGAGAAGATCCGAACCAAGTGGATCCCGCTTGTGAATGGCAGGACGGCGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043897.16 ENSMUST00000176591.8 ENSMUST00000176709.2 |
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| CDS CCA 72 bp | GCTGAACACTCCACGCAGGTCTCTATCTCAGGAAACTaGCTCATGATGGGCAGCACAGCCTCCATGGTACTC | + |
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Preference number: 6 (lower is better) Translates to: AEHSTQVSISGN*LMMGSTASMVL Trigger: GAGTACCATGGAGGCTGTGCTGCCCATCATGAGCCAGTTTCCTGAGATAGAGACCTGCGTGGAGTGTTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CAA 72 bp | GGTAGGGTAACCCAGGTAGCCAAGGTGTGCAAGGCATaGCTGGACATCCAAGTAGGTCATGAGGGTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: GRVTQVAKVCKA*LDIQVGHEGPL Trigger: CAGTGGACCCTCATGACCTACTTGGATGTCCAGCAATGCCTTGCACACCTTGGCTACCTGGGTTACCCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS TCA 72 bp | CTCCTCCTGAAGTTCTTCCTCTGTCTGCTCCGCTTCTaGGTAATCCACGATATGAGTGGGCACCTTCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: LLLKFFLCLLRF*VIHDMSGHLLR Trigger: CCGGAGAAGGTGCCCACTCATATCGTGGATTACTCAGAAGCGGAGCAGACAGAGGAAGAACTTCAGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043897.16 ENSMUST00000176591.8 |
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| CDS TCA 72 bp | GGTGTGCAAGGCATTGCTGGACATCCAAGTAGGTCATaGGGGTCCACTGGCAGAGATAGCCATGCAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: GVQGIAGHPSRS*GSTGRDSHAKA Trigger: TGCCTTTGCATGGCTATCTCTGCCAGTGGACCCTCATGACCTACTTGGATGTCCAGCAATGCCTTGCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS TCA 72 bp | GATCTCCTCCTGAAGTTCTTCCTCTGTCTGCTCCGCTaGGTAATCCACGATATGAGTGGGCACCTTCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: DLLLKFFLCLLR*VIHDMSGHLLR Trigger: CCGGAGAAGGTGCCCACTCATATCGTGGATTACTCAGCGGAGCAGACAGAGGAAGAACTTCAGGAGGAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176709.2 |
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| CDS CCA 72 bp | AGATTCTGTAGTTCCGTGGGCGAGAGGACACCATCATaGTCCTGGTCATGCTTCTCGAACATCCGCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: RFCSSVGERTPS*SWSCFSNIRCT Trigger: TGTGCAGCGGATGTTCGAGAAGCATGACCAGGACCATGATGGTGTCCTCTCGCCCACGGAACTACAGAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CAA 90 bp | TTCACAGAGGGTAGGGTAACCCAGGTAGCCAAGGTGTGCAAGGCATaGCTGGACATCCAAGTAGGTCATGAGGGTCCACTGGCAGAGATA | + |
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Preference number: 6 (lower is better) Translates to: FTEGRVTQVAKVCKA*LDIQVGHEGPLAEI Trigger: TATCTCTGCCAGTGGACCCTCATGACCTACTTGGATGTCCAGCAATGCCTTGCACACCTTGGCTACCTGGGTTACCCTACCCTCTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS GCA 72 bp | TTCACAGAGGGTAGGGTAACCCAGGTAGCCAAGGTGTaGAAGGCATTGCTGGACATCCAAGTAGGTCATGAG | + |
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Preference number: 6 (lower is better) Translates to: FTEGRVTQVAKV*KALLDIQVGHE Trigger: CTCATGACCTACTTGGATGTCCAGCAATGCCTTGCACACCTTGGCTACCTGGGTTACCCTACCCTCTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CAA 90 bp | CTGTCAGCATTCACTTCACACAGAATCAGGTACTTCTCCTGCCCGTaGACCCGCACTGTATTGATGGTATGCAGGGGGAATTTCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LSAFTSHRIRYFSCP*TRTVLMVCRGNFSG Trigger: CCCTGAGAAATTCCCCCTGCATACCATCAATACAGTGCGGGTCAACGGGCAGGAGAAGTACCTGATTCTGTGTGAAGTGAATGCTGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS GCA 72 bp | TCAGCATTCACTTCACACAGAATCAGGTACTTCTCCTaGCCGTTGACCCGCACTGTATTGATGGTATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SAFTSHRIRYFS*PLTRTVLMVCR Trigger: CCTGCATACCATCAATACAGTGCGGGTCAACGGGCAGGAGAAGTACCTGATTCTGTGTGAAGTGAATGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CAA 72 bp | TTCACTTCACACAGAATCAGGTACTTCTCCTGCCCGTaGACCCGCACTGTATTGATGGTATGCAGGGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: FTSHRIRYFSCP*TRTVLMVCRGN Trigger: ATTCCCCCTGCATACCATCAATACAGTGCGGGTCAACGGGCAGGAGAAGTACCTGATTCTGTGTGAAGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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| CDS CCA 72 bp | CATAGTAGAACAGCTCTGAGATATTCCTCAAGTGCTTaGCTGAACACTCCACGCAGGTCTCTATCTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: HSRTALRYSSSA*LNTPRRSLSQE Trigger: TTCCTGAGATAGAGACCTGCGTGGAGTGTTCAGCCAAGCACTTGAGGAATATCTCAGAGCTGTTCTACTATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043897.16 |
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