Pregenerated sensors for RHOT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017686Ensembl transcript IDs: ENSMUST00000017831.16, ENSMUST00000055056.16, ENSMUST00000077451.14, ENSMUST00000092857.13, ENSMUST00000134894.2, ENSMUST00000237515.2
Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAACAACAGAGGGAAGCGCCATCATGACAAGGAGTAGACGACCATaGCAGAGTCAGAAGGGCAGGCAGGGCAGGCAGACCTCAGAGATC | + |
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Preference number: 1 (lower is better) Translates to: PTTEGSAIMTRSRRP*QSQKGRQGRQTSEI Trigger: GATCTCTGAGGTCTGCCTGCCCTGCCTGCCCTTCTGACTCTGTCATGGTCGTCTACTCCTTGTCATGATGGCGCTTCCCTCTGTTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
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| 3UTR TCA 90 bp | AGCCGGCCTACCGCAAGTGACGGAAACAGAGTGGTTTTGGAAAGCTaGCCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTA | + |
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Preference number: 1 (lower is better) Translates to: SRPTASDGNRVVLES*PRLLCDLKNGEKRL Trigger: TAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTTCCAAAACCACTCTGTTTCCGTCACTTGCGGTAGGCCGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR CCA 90 bp | GGCTTTGAAGCCGGCCTACCGCAAGTGACGGAAACAGAGTGGTTTTaGAAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: GFEAGLPQVTETEWF*KADLVSCVILKMER Trigger: TCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTTCCAAAACCACTCTGTTTCCGTCACTTGCGGTAGGCCGGCTTCAAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR TCA 90 bp | GGGCCAAAGATGGCTCAGCAGATAAAGGCATCTGTTTACCAAGCCTaGTGTTCTAAGTTCTATCACCAAGACCCACACTGTACCAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: GPKMAQQIKASVYQA*CSKFYHQDPHCTRE Trigger: TTCTCTGGTACAGTGTGGGTCTTGGTGATAGAACTTAGAACATCAGGCTTGGTAAACAGATGCCTTTATCTGCTGAGCCATCTTTGGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGGCAGGCAGGGCAGGCAGACCTCAGAGATCGCCGTCACAGCCCTCTAAGATACAGAACACATCATaGCACATGCAGCTACGGCAA | + |
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Preference number: 2 (lower is better) Translates to: RRAGRAGRPQRSPSQPSKIQNTS*HMQLRQ Trigger: TTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTAT...CTTAGAGGGCTGTGACGGCGATCTCTGAGGTCTGCCTGCCCTGCCTGCCCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
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| 3UTR-3UTR GCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAGTAACCTCCGCCACCTaGTCCTGCCTCAGGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVVTSAT*SCLRPS Trigger: TGAGGGCCTGAGGCAGGAGCAGGTGGCGGAGGTTAC...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGGCAGGCAGGGCAGGCAGACCTCAGAGATCGCCGTCACAGCCCTCTAAGATAAAATCCACACTCTaGCAAAGAAGCAATGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: RRAGRAGRPQRSPSQPSKIKSTL*QRSNVV Trigger: CACCACATTGCTTCTTTGTCAGAGTGTGGATTTTAT...CTTAGAGGGCTGTGACGGCGATCTCTGAGGTCTGCCTGCCCTGCCTGCCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
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| 3UTR-3UTR GCA 90 bp | CAATGTGGTGACACAGGTAACCTCCGCCACCTGCTCCTGCCTCAGGCCCTCAGCTGTTTTCTTTCCACATaGCAGTCAATACTGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: QCGDTGNLRHLLLPQALSCFLST*QSILQS Trigger: TGACTGCAGTATTGACTGGCATGTGGAAAGAAAACA...GCTGAGGGCCTGAGGCAGGAGCAGGTGGCGGAGGTTACCTGTGTCACCACATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGGCAGGCAGGGCAGGCAGACCTCAGAGATCGCCGTCACAGCCCTCTAAGTGTTTTCTTTCCACATaGCAGTCAATACTGCAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: RRAGRAGRPQRSPSQPSKCFLST*QSILQS Trigger: TGACTGCAGTATTGACTGGCATGTGGAAAGAAAACA...CTTAGAGGGCTGTGACGGCGATCTCTGAGGTCTGCCTGCCCTGCCTGCCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
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| 3UTR-3UTR TCA 90 bp | CAATGTGGTGACACAGGTAACCTCCGCCACCTGCTCCTGCCTCAGGCCCTCAGCTTCCCTTTTGGCCTCTaGAATTTAGCCACTTATATT | + |
|
Preference number: 2 (lower is better) Translates to: QCGDTGNLRHLLLPQALSFPFGL*NLATYI Trigger: AATATAAGTGGCTAAATTTCAGAGGCCAAAAGGGAA...GCTGAGGGCCTGAGGCAGGAGCAGGTGGCGGAGGTTACCTGTGTCACCACATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR TCA 90 bp | ACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACACAATCTCTGGGTaGCTGAAACCTAGCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: TVSLQVGIQQWSGRLLYCNTISG*LKPSRV Trigger: CACCCTGCTAGGTTTCAGTCACCCAGAGATTGTGTT...ACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR TCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAAACACAATCTCTGGGTaGCTGAAACCTAGCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVNTISG*LKPSRV Trigger: CACCCTGCTAGGTTTCAGTCACCCAGAGATTGTGTT...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR CCA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGAAACAGAGTGGTTTTaGAAAGCTGACCTCGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GRFHFRWEFSSGQGGFFIETEWF*KADLVS Trigger: GGAGACGAGGTCAGCTTTCCAAAACCACTCTGTTTC...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR TCA 90 bp | ACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTCTGGAAACACATTTCTaGAGTCAGTTCAGGAGACCG | + |
|
Preference number: 2 (lower is better) Translates to: TVSLQVGIQQWSGRLLYCLETHF*SQFRRP Trigger: CGGTCTCCTGAACTGACTTCAGAAATGTGTTTCCAG...ACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR CCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAGTGACGGAAACAGAGTaGTTTTGGAAAGCTGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVVTETE*FWKADL Trigger: GAGGTCAGCTTTCCAAAACCACTCTGTTTCCGTCAC...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR CCA 90 bp | ACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTGTGACGGAAACAGAGTaGTTTTGGAAAGCTGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: TVSLQVGIQQWSGRLLYCVTETE*FWKADL Trigger: GAGGTCAGCTTTCCAAAACCACTCTGTTTCCGTCAC...ACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAGGTTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCACTGGAAACACATTTCTaGAGTCAGTTCAGGAGACCG | + |
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Preference number: 2 (lower is better) Translates to: SRLSWPDTEHIMTHAATALETHF*SQFRRP Trigger: CGGTCTCCTGAACTGACTTCAGAAATGTGTTTCCAG...TGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAACCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACAAACACAATCTCTGGGTaGCTGAAACCTAGCAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LARYRTHHDTCSYGNNYTNTISG*LKPSRV Trigger: CACCCTGCTAGGTTTCAGTCACCCAGAGATTGTGTT...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR GCA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATGTAACCTCCGCCACCTaGTCCTGCCTCAGGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNVTSAT*SCLRPS Trigger: TGAGGGCCTGAGGCAGGAGCAGGTGGCGGAGGTTAC...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAGGTTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAGAAACAGAGTGGTTTTaGAAAGCTGACCTCGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SRLSWPDTEHIMTHAATAETEWF*KADLVS Trigger: GGAGACGAGGTCAGCTTTCCAAAACCACTCTGTTTC...TGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAACCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTAACACAATCTCTGGGTaGCTGAAACCTAGCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LLCDLKNGEKRLQKPKDCNTISG*LKPSRV Trigger: CACCCTGCTAGGTTTCAGTCACCCAGAGATTGTGTT...ACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR CCA 90 bp | TTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTCGGTTTCACTTCAGGTaGGAATTCAGCAGTGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LSWPDTEHIMTHAATAITRFHFR*EFSSGQ Trigger: CTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG...AGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR GCA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTCAGGAGACCGTATCTTaGTTGAATATGTACATTATT | + |
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Preference number: 2 (lower is better) Translates to: GRFHFRWEFSSGQGGFFIQETVS*LNMYII Trigger: AATAATGTACATATTCAAGCAAGATACGGTCTCCTG...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAGGTTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCATTCCCTTTTGGCCTCTaGAATTTAGCCACTTATATT | + |
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Preference number: 2 (lower is better) Translates to: SRLSWPDTEHIMTHAATAFPFGL*NLATYI Trigger: AATATAAGTGGCTAAATTTCAGAGGCCAAAAGGGAA...TGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAACCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACAATAAAATCCACACTCTaGCAAAGAAGCAATGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LARYRTHHDTCSYGNNYTIKSTL*QRSNVV Trigger: CACCACATTGCTTCTTTGTCAGAGTGTGGATTTTAT...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGATGTTTTCTTTCCACATaGCAGTCAATACTGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: KADLVSCVILKMERNGYRCFLST*QSILQS Trigger: TGACTGCAGTATTGACTGGCATGTGGAAAGAAAACA...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR TCA 90 bp | GAACACTACTGTAGAAATGCCTGGAAACACATTTCTGAAGTCAGTTCAGGAGACTTCCCTTTTGGCCTCTaGAATTTAGCCACTTATATT | + |
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Preference number: 2 (lower is better) Translates to: EHYCRNAWKHISEVSSGDFPFGL*NLATYI Trigger: AATATAAGTGGCTAAATTTCAGAGGCCAAAAGGGAA...GTCTCCTGAACTGACTTCAGAAATGTGTTTCCAGGCATTTCTACAGTAGTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTCAGGAGACCGTATCTTaGTTGAATATGTACATTATT | + |
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Preference number: 2 (lower is better) Translates to: LLCDLKNGEKRLQKPKDCQETVS*LNMYII Trigger: AATAATGTACATATTCAAGCAAGATACGGTCTCCTG...ACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR GCA 72 bp | AATGTGGTGACACAGGTAACCTCCGCCACCTGCTCCTaGCTCAGGCCCTCAGCCACATACTCAGCTCCACAA | + |
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Preference number: 3 (lower is better) Translates to: NVVTQVTSATCS*LRPSATYSAPQ Trigger: TTGTGGAGCTGAGTATGTGGCTGAGGGCCTGAGGCAGGAGCAGGTGGCGGAGGTTACCTGTGTCACCACATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR TCA 72 bp | CACTGTACCAGAGAACTGACTCCTCTAACTCGACTCTaGGCGCCACACACAGGCCATGGCACACACTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: HCTRELTPLTRL*APHTGHGTHWS Trigger: GGACCAGTGTGTGCCATGGCCTGTGTGTGGCGCTCAGAGTCGAGTTAGAGGAGTCAGTTCTCTGGTACAGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
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| 3UTR CCA 72 bp | TTTGAAGCCGGCCTACCGCAAGTGACGGAAACAGAGTaGTTTTGGAAAGCTGACCTCGTCTCCTGTGTGATC | + |
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Preference number: 3 (lower is better) Translates to: FEAGLPQVTETE*FWKADLVSCVI Trigger: GATCACACAGGAGACGAGGTCAGCTTTCCAAAACCACTCTGTTTCCGTCACTTGCGGTAGGCCGGCTTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR CCA 72 bp | ACAGACACGGCCATTCGAGGACGGTTTCACTTCAGGTaGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATT | + |
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Preference number: 3 (lower is better) Translates to: TDTAIRGRFHFR*EFSSGQGGFFI Trigger: AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCCTCGAATGGCCGTGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGTCAGGAGACCGTATCTaGCTTGAATATGTACATTAT | + |
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Preference number: 3 (lower is better) Translates to: QLHNFLGFMMALKPAYRKSGDRI*LEYVHY Trigger: ATAATGTACATATTCAAGCAAGATACGGTCTCCTGA...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR CAA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTTCAGGAGACCGTATCTaGCTTGAATATGTACATTAT | + |
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Preference number: 3 (lower is better) Translates to: GRFHFRWEFSSGQGGFFISGDRI*LEYVHY Trigger: ATAATGTACATATTCAAGCAAGATACGGTCTCCTGA...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR CAA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTATCAGGAGACCGTATCTaGCTTGAATATGTACATTAT | + |
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Preference number: 3 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVSGDRI*LEYVHY Trigger: ATAATGTACATATTCAAGCAAGATACGGTCTCCTGA...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACATCAGGAGACCGTATCTaGCTTGAATATGTACATTAT | + |
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Preference number: 3 (lower is better) Translates to: LARYRTHHDTCSYGNNYTSGDRI*LEYVHY Trigger: ATAATGTACATATTCAAGCAAGATACGGTCTCCTGA...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR TCA 72 bp | CGAAGGATTGTTCTGAGTCACCTTGAAATAAATACGTaGTGCCTGAGTAAACACAATCTCTGGGTGACTGAA | + |
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Preference number: 3 (lower is better) Translates to: RRIVLSHLEINT*CLSKHNLWVTE Trigger: TTCAGTCACCCAGAGATTGTGTTTACTCAGGCATCACGTATTTATTTCAAGGTGACTCAGAACAATCCTTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| 3UTR-3UTR CAA 90 bp | CTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTCTGAGTCACCTTCAGGAGACCGTATCTaGCTTGAATATGTACATTAT | + |
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Preference number: 3 (lower is better) Translates to: LKNGEKRLQKPKDCSESPSGDRI*LEYVHY Trigger: ATAATGTACATATTCAAGCAAGATACGGTCTCCTGA...AGGTGACTCAGAACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR GCA 90 bp | CAATGTGGTGACACAGGTAACCTCCGCCACCTGCTCCTGCCTCAGGCCCTCAGCTACACCTGTTGCAGGTaGACATGCAGCGTAACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QCGDTGNLRHLLLPQALSYTCCR*TCSVTG Trigger: CCCGGTTACGCTGCATGTGCACCTGCAACAGGTGTA...GCTGAGGGCCTGAGGCAGGAGCAGGTGGCGGAGGTTACCTGTGTCACCACATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | CAATGTGGTGACACAGGTAACCTCCGCCACCTGCTCCTGCCTCAGGCCCTCAGCAGAACGTTGAGCTCTTaGGGTCAGCTTGTGTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: QCGDTGNLRHLLLPQALSRTLSS*GQLVSR Trigger: ACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCT...GCTGAGGGCCTGAGGCAGGAGCAGGTGGCGGAGGTTACCTGTGTCACCACATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGCAGGCAGGGCAGGCAGACCTCAGAGATCGCCGTCACAGCCCTCTAAGAGAACGTTGAGCTCTTaGGGTCAGCTTGTGTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: RRAGRAGRPQRSPSQPSKRTLSS*GQLVSR Trigger: ACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCT...CTTAGAGGGCTGTGACGGCGATCTCTGAGGTCTGCCTGCCCTGCCTGCCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
||
| CDS-3UTR TCA 90 bp | CAATGTGGTGACACAGGTAACCTCCGCCACCTGCTCCTGCCTCAGGCCCTCAGCTTGCAAGTGAAGGCTTaGGGTGGAGGCATTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QCGDTGNLRHLLLPQALSLQVKA*GGGILC Trigger: ACACAAAATGCCTCCACCTCAAGCCTTCACTTGCAA...GCTGAGGGCCTGAGGCAGGAGCAGGTGGCGGAGGTTACCTGTGTCACCACATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGCAGGCAGGGCAGGCAGACCTCAGAGATCGCCGTCACAGCCCTCTAAGGTCCAAGTAGTCTCATaGCTCCCCCTCTGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRAGRAGRPQRSPSQPSKVQVVS*LPLWIK Trigger: TTTTATCCAGAGGGGGAGGCATGAGACTACTTGGAC...CTTAGAGGGCTGTGACGGCGATCTCTGAGGTCTGCCTGCCCTGCCTGCCCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGCAGGCAGGGCAGGCAGACCTCAGAGATCGCCGTCACAGCCCTCTAAGGACTTCATGCAGGTCTaGCTTTGCAGCTACAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: RRAGRAGRPQRSPSQPSKDFMQV*LCSYNQ Trigger: TTGATTGTAGCTGCAAAGTCAGACCTGCATGAAGTC...CTTAGAGGGCTGTGACGGCGATCTCTGAGGTCTGCCTGCCCTGCCTGCCCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGCAGGCAGGGCAGGCAGACCTCAGAGATCGCCGTCACAGCCCTCTAAGCAAAGATATCCTTACTaGGGGCATCAGCAGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRAGRAGRPQRSPSQPSKQRYPY*GHQQYC Trigger: GCAATACTGCTGATGCCCCCAGTAAGGATATCTTTG...CTTAGAGGGCTGTGACGGCGATCTCTGAGGTCTGCCTGCCCTGCCTGCCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
||
| CDS-3UTR CCA 90 bp | CAATGTGGTGACACAGGTAACCTCCGCCACCTGCTCCTGCCTCAGGCCCTCAGCCTTGTTCCGTCAGTATaGAATAGCCTAGATATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QCGDTGNLRHLLLPQALSLVPSV*NSLDIP Trigger: TGGGATATCTAGGCTATTCCATACTGACGGAACAAG...GCTGAGGGCCTGAGGCAGGAGCAGGTGGCGGAGGTTACCTGTGTCACCACATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLHNFLGFMMALKPAYRKAKPER*ALEVSL Trigger: CAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGC...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGCAGGCAGGGCAGGCAGACCTCAGAGATCGCCGTCACAGCCCTCTAAGATATCAAAGGCAGCCTaGTGTCTTTGTCTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRAGRAGRPQRSPSQPSKISKAA*CLCLFF Trigger: AAAGAACAGACAAAGACAGCAGGCTGCCTTTGATAT...CTTAGAGGGCTGTGACGGCGATCTCTGAGGTCTGCCTGCCCTGCCTGCCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
||
| CDS-3UTR GCA 90 bp | ACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTTGTTGCAGGTGCACATaGAGCGTAACCGGGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVSLQVGIQQWSGRLLYCCCRCT*SVTGHG Trigger: CCCATGCCCGGTTACGCTGCATGTGCACCTGCAACA...ACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTTACACCTGTTGCAGGTaGACATGCAGCGTAACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRFHFRWEFSSGQGGFFIYTCCR*TCSVTG Trigger: CCCGGTTACGCTGCATGTGCACCTGCAACAGGTGTA...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGCAGCAGTATTGCAAGTaGAGGCTTGAGGTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLHNFLGFMMALKPAYRKQQYCK*RLEVEA Trigger: TGCCTCCACCTCAAGCCTTCACTTGCAATACTGCTG...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR TCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVAKPER*ALEVSL Trigger: CAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGC...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGCAGGCAGGGCAGGCAGACCTCAGAGATCGCCGTCACAGCCCTCTAAGTCACGAATTTTCTTCTaGCTCATTAGGTTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRAGRAGRPQRSPSQPSKSRIFF*LIRFLP Trigger: TGGAAGAAACCTAATGAGGCAGAAGAAAATTCGTGA...CTTAGAGGGCTGTGACGGCGATCTCTGAGGTCTGCCTGCCCTGCCTGCCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
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| CDS-3UTR GCA 90 bp | CAATGTGGTGACACAGGTAACCTCCGCCACCTGCTCCTGCCTCAGGCCCTCAGCGTGCCTGTTAAGAACTaGAGTGAAGATTTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QCGDTGNLRHLLLPQALSVPVKN*SEDFVL Trigger: AAGAACAAAATCTTCACTGCAGTTCTTAACAGGCAC...GCTGAGGGCCTGAGGCAGGAGCAGGTGGCGGAGGTTACCTGTGTCACCACATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
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| CDS-3UTR TCA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTAGAACGTTGAGCTCTTaGGGTCAGCTTGTGTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: GRFHFRWEFSSGQGGFFIRTLSS*GQLVSR Trigger: ACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCT...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR GCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTACTATTCTATCAGTGCTaGCCATGTCTCGGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVLFYQC*PCLGRG Trigger: GCCTCTCCCGAGACATGGGCAGCACTGATAGAATAG...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017831.16 ENSMUST00000077451.14 |
||
| CDS-3UTR TCA 90 bp | ACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAGAGGCCCTGTAGGATaGAGAACAGCTTTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVSLQVGIQQWSGRLLYCRGPVG*RTAFCA Trigger: TGCACAGAAAGCTGTTCTTCATCCTACAGGGCCTCT...ACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR TCA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGCTTCCAAGGAGAGACTaGAGAACTCCAGTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLHNFLGFMMALKPAYRKLPRRD*RTPVFP Trigger: TGGGAAAACTGGAGTTCTTCAGTCTCTCCTTGGAAG...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR TCA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGTTGCAAGTGAAGGCTTaGGGTGGAGGCATTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLHNFLGFMMALKPAYRKLQVKA*GGGILC Trigger: ACACAAAATGCCTCCACCTCAAGCCTTCACTTGCAA...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR TCA 90 bp | AGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTAAATCTTCTACGGAGCTaGCGGCGTGCACCTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SIQNVHRSMCFGRPVPPLNLLRS*RRAPGE Trigger: CTCACCAGGTGCACGCCGTCAGCTCCGTAGAAGATT...TAAGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
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| CDS-3UTR GCA 90 bp | ACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAGCAAAGCCCACGACTaGAAAGACCGTAGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVSLQVGIQQWSGRLLYCSKAHD*KDRSTK Trigger: TTTGGTGCTACGGTCTTTGCAGTCGTGGGCTTTGCT...ACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR CCA 90 bp | AGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTACGTCTGCTAACAGCATaGCACCCCACTCAGCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: SIQNVHRSMCFGRPVPPLRLLTA*HPTQLP Trigger: GGGTAGCTGAGTGGGGTGCCATGCTGTTAGCAGACG...TAAGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
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| CDS-3UTR TCA 90 bp | TCTAGGTTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAAGAGGCCCTGTAGGATaGAGAACAGCTTTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRLSWPDTEHIMTHAATARGPVG*RTAFCA Trigger: TGCACAGAAAGCTGTTCTTCATCCTACAGGGCCTCT...TGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAACCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS-3UTR TCA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGTGCTATGTTCCTGTTTaGCTTCATGCAGGTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: QLHNFLGFMMALKPAYRKCYVPV*LHAGLT Trigger: AGTCAGACCTGCATGAAGTCAAACAGGAACATAGCA...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR TCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTATTGCAAGTGAAGGCTTaGGGTGGAGGCATTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVLQVKA*GGGILC Trigger: ACACAAAATGCCTCCACCTCAAGCCTTCACTTGCAA...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | TTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSWPDTEHIMTHAATAITAKPER*ALEVSL Trigger: CAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGC...AGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLCDLKNGEKRLQKPKDCAKPER*ALEVSL Trigger: CAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGC...ACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGTCCTGTTTGACTTCATaGAGGTCTGACTTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLHNFLGFMMALKPAYRKSCLTS*RSDFAA Trigger: AGCTGCAAAGTCAGACCTGCATGAAGTCAAACAGGA...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | GAACACTACTGTAGAAATGCCTGGAAACACATTTCTGAAGTCAGTTCAGGAGACTGTTGCAGGTGCACATaGAGCGTAACCGGGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: EHYCRNAWKHISEVSSGDCCRCT*SVTGHG Trigger: CCCATGCCCGGTTACGCTGCATGTGCACCTGCAACA...GTCTCCTGAACTGACTTCAGAAATGTGTTTCCAGGCATTTCTACAGTAGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTCTGAGTCACCTTACACCTGTTGCAGGTaGACATGCAGCGTAACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKNGEKRLQKPKDCSESPYTCCR*TCSVTG Trigger: CCCGGTTACGCTGCATGTGCACCTGCAACAGGTGTA...AGGTGACTCAGAACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTACACCTGTTGCAGGTaGACATGCAGCGTAACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPYTCCR*TCSVTG Trigger: CCCGGTTACGCTGCATGTGCACCTGCAACAGGTGTA...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTGTTGCAGGTGCACATaGAGCGTAACCGGGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPCCRCT*SVTGHG Trigger: TCCATGCCCGGTTACGCTGCATGTGCACCTGCAACA...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077451.14 ENSMUST00000237515.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGAGTGAAGGCTTGAGGTaGAGGCATTTTGTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLHNFLGFMMALKPAYRKSEGLR*RHFVFP Trigger: AGGAAACACAAAATGCCTCCACCTCAAGCCTTCACT...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTAGTGAAGGCTTGAGGTaGAGGCATTTTGTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRFHFRWEFSSGQGGFFISEGLR*RHFVFP Trigger: AGGAAACACAAAATGCCTCCACCTCAAGCCTTCACT...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTATTCTCTGGAAGAAGTTaGGCTCAGCATCATTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVFSGRS*AQHHSE Trigger: CTCTGAATGATGCTGAGCTCAACTTCTTCCAGAGAA...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR TCA 90 bp | ACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTTGCTATGTTCCTGTTTaGCTTCATGCAGGTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: TVSLQVGIQQWSGRLLYCCYVPV*LHAGLT Trigger: AGTCAGACCTGCATGAAGTCAAACAGGAACATAGCA...ACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTCTGAGTCACCTCAGCAGTATTGCAAGTaGAGGCTTGAGGTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKNGEKRLQKPKDCSESPQQYCK*RLEVEA Trigger: TGCCTCCACCTCAAGCCTTCACTTGCAATACTGCTG...AGGTGACTCAGAACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | TTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTCAGCAGTATTGCAAGTaGAGGCTTGAGGTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSWPDTEHIMTHAATAITQQYCK*RLEVEA Trigger: TGCCTCCACCTCAAGCCTTCACTTGCAATACTGCTG...AGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACAAGAACGTTGAGCTCTTaGGGTCAGCTTGTGTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LARYRTHHDTCSYGNNYTRTLSS*GQLVSR Trigger: ACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCT...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGATGTCTCGGGAGAGGCTaGCTCTGTAATGATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KADLVSCVILKMERNGYRCLGRG*LCNDPL Trigger: CAGAGGATCATTACAGAGGCAGCCTCTCCCGAGACA...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017831.16 ENSMUST00000077451.14 |
||
| CDS-3UTR GCA 90 bp | TTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTTGTCTCGGGAGAGGCTaGCTCTGTAATGATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSWPDTEHIMTHAATAITCLGRG*LCNDPL Trigger: CAGAGGATCATTACAGAGGCAGCCTCTCCCGAGACA...AGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017831.16 ENSMUST00000077451.14 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTCTGAGTCACCTCTATTCTATCAGTGCTaGCCATGTCTCGGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKNGEKRLQKPKDCSESPLFYQC*PCLGRG Trigger: GCCTCTCCCGAGACATGGGCAGCACTGATAGAATAG...AGGTGACTCAGAACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017831.16 ENSMUST00000077451.14 |
||
| CDS-3UTR GCA 90 bp | AGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTACTATTCTATCAGTGCTaGCCATGTCTCGGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SIQNVHRSMCFGRPVPPLLFYQC*PCLGRG Trigger: GCCTCTCCCGAGACATGGGCAGCACTGATAGAATAG...TAAGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017831.16 ENSMUST00000077451.14 ENSMUST00000237515.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGCTTGTTCCGTCAGTATaGAATAGCCTAGATATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLHNFLGFMMALKPAYRKLVPSV*NSLDIP Trigger: TGGGATATCTAGGCTATTCCATACTGACGGAACAAG...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | ACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTTGTTACTGTAATGGCTaGAGCTTGAGACTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVSLQVGIQQWSGRLLYCCYCNG*SLRLLF Trigger: GAACAAGAGTCTCAAGCTTCAGCCATTACAGTAACA...ACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACACTTCCAAGGAGAGACTaGAGAACTCCAGTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LARYRTHHDTCSYGNNYTLPRRD*RTPVFP Trigger: TGGGAAAACTGGAGTTCTTCAGTCTCTCCTTGGAAG...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | GAACACTACTGTAGAAATGCCTGGAAACACATTTCTGAAGTCAGTTCAGGAGACCAGCAGTATTGCAAGTaGAGGCTTGAGGTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHYCRNAWKHISEVSSGDQQYCK*RLEVEA Trigger: TGCCTCCACCTCAAGCCTTCACTTGCAATACTGCTG...GTCTCCTGAACTGACTTCAGAAATGTGTTTCCAGGCATTTCTACAGTAGTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTAGAACGTTGAGCTCTTaGGGTCAGCTTGTGTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPRTLSS*GQLVSR Trigger: ACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCT...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR TCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAGAGTTGAGGAAGTTCTaGCAGATGCAAAATGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVELRKF*QMQNVH Trigger: GTGTACATTTTGCATCTGTCAGAACTTCCTCAACTC...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | TCTAGGTTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAAGATTGCAGCAAGTCTaGGTTGAGGAAGTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SRLSWPDTEHIMTHAATARLQQV*VEEVLT Trigger: TGTCAGAACTTCCTCAACTCAGACTTGCTGCAATCT...TGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAACCTAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | TCCACATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCAACGGCGTGCACCTGGTaGGTAATACTGCCTTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: STCQSILQSLLGVKYSYATACTW*VILPSS Trigger: CGACGAAGGCAGTATTACTCACCAGGTGCACGCCGT...TGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCATGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
||
| CDS-3UTR GCA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGACTCTGAGATATCGTaGAGCAACAAGTATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRFHFRWEFSSGQGGFFIDSEIS*SNKYFS Trigger: AGAGAAATACTTGTTGCTGCACGATATCTCAGAGTC...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCAAAGCCCACGACTaGAAAGACCGTAGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KADLVSCVILKMERNGYRSKAHD*KDRSTK Trigger: TTTGGTGCTACGGTCTTTGCAGTCGTGGGCTTTGCT...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTAGCAAAGCCCACGACTaGAAAGACCGTAGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPSKAHD*KDRSTK Trigger: TTTGGTGCTACGGTCTTTGCAGTCGTGGGCTTTGCT...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTAGCAAAGCCCACGACTaGAAAGACCGTAGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLCDLKNGEKRLQKPKDCSKAHD*KDRSTK Trigger: TTTGGTGCTACGGTCTTTGCAGTCGTGGGCTTTGCT...ACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTTCATGCCTCCCCCTCTaGATAAAAAGTGTATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRFHFRWEFSSGQGGFFISCLPL*IKSVCK Trigger: TTTACATACACTTTTTATCCAGAGGGGGAGGCATGA...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | GACACATGCAGCTACGGCAATAACTACACAGACACGGCCATTCGAGGACGGTTTTGTGTTATTTACATCTaGTCCCCAAGGTATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DTCSYGNNYTDTAIRGRFCVIYI*SPRYVR Trigger: CCTTACATACCTTGGGGACCAGATGTAAATAACACA...AAACCGTCCTCGAATGGCCGTGTCTGTGTAGTTATTGCCGTAGCTGCATGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGTGTGTTATTTACATCTaGTCCCCAAGGTATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLHNFLGFMMALKPAYRKCVIYI*SPRYVR Trigger: CCTTACATACCTTGGGGACCAGATGTAAATAACACA...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR CCA 90 bp | ACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTCTTGTTCCGTCAGTATaGAATAGCCTAGATATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVSLQVGIQQWSGRLLYCLVPSV*NSLDIP Trigger: TGGGATATCTAGGCTATTCCATACTGACGGAACAAG...ACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTACTTGTTCCGTCAGTATaGAATAGCCTAGATATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVLVPSV*NSLDIP Trigger: TGGGATATCTAGGCTATTCCATACTGACGGAACAAG...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGGTTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAAGTGAAGGCTTGAGGTaGAGGCATTTTGTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRLSWPDTEHIMTHAATASEGLR*RHFVFP Trigger: AGGAAACACAAAATGCCTCCACCTCAAGCCTTCACT...TGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAACCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTATCTGTAATGATCCTCTaGGTACATGGCCATTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVSVMIL*VHGHCC Trigger: ACAACAATGGCCATGTACCCAGAGGATCATTACAGA...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017831.16 ENSMUST00000077451.14 |
||
| CDS-3UTR TCA 90 bp | GAACACTACTGTAGAAATGCCTGGAAACACATTTCTGAAGTCAGTTCAGGAGACAGAGGCCCTGTAGGATaGAGAACAGCTTTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHYCRNAWKHISEVSSGDRGPVG*RTAFCA Trigger: TGCACAGAAAGCTGTTCTTCATCCTACAGGGCCTCT...GTCTCCTGAACTGACTTCAGAAATGTGTTTCCAGGCATTTCTACAGTAGTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS-3UTR TCA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGACTTCCAAGGAGAGACTaGAGAACTCCAGTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KADLVSCVILKMERNGYRLPRRD*RTPVFP Trigger: TGGGAAAACTGGAGTTCTTCAGTCTCTCCTTGGAAG...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | TTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTCTTCCAAGGAGAGACTaGAGAACTCCAGTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSWPDTEHIMTHAATAITLPRRD*RTPVFP Trigger: TGGGAAAACTGGAGTTCTTCAGTCTCTCCTTGGAAG...AGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACAGACTTCATGCAGGTCTaGCTTTGCAGCTACAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LARYRTHHDTCSYGNNYTDFMQV*LCSYNQ Trigger: TTGATTGTAGCTGCAAAGTCAGACCTGCATGAAGTC...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTCTGAGTCACCTTTGCAAGTGAAGGCTTaGGGTGGAGGCATTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKNGEKRLQKPKDCSESPLQVKA*GGGILC Trigger: ACACAAAATGCCTCCACCTCAAGCCTTCACTTGCAA...AGGTGACTCAGAACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTTGCAAGTGAAGGCTTaGGGTGGAGGCATTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPLQVKA*GGGILC Trigger: ACACAAAATGCCTCCACCTCAAGCCTTCACTTGCAA...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR TCA 90 bp | TCCACATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCAGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STCQSILQSLLGVKYSYAAKPER*ALEVSL Trigger: CAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGC...TGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCATGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR GCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAATATCAAAGGCAGCCTaGTGTCTTTGTCTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVISKAA*CLCLFF Trigger: AAAGAACAGACAAAGACAGCAGGCTGCCTTTGATAT...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR GCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACACCGTCACTTAAGTaGTTTCTAACCACATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVTPSLK*FLTTFL Trigger: CAAGAATGTGGTTAGAAAGCACTTAAGTGACGGTGT...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTGTCCAAGTAGTCTCATaGCTCCCCCTCTGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLCDLKNGEKRLQKPKDCVQVVS*LPLWIK Trigger: TTTTATCCAGAGGGGGAGGCATGAGACTACTTGGAC...ACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTCTGAGTCACCTGTCCAAGTAGTCTCATaGCTCCCCCTCTGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKNGEKRLQKPKDCSESPVQVVS*LPLWIK Trigger: TTTTATCCAGAGGGGGAGGCATGAGACTACTTGGAC...AGGTGACTCAGAACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGCATGTTTGTCAAAGGTaGTCTGGAGAAACAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: QLHNFLGFMMALKPAYRKHVCQR*SGETNM Trigger: CATATTTGTTTCTCCAGAGCACCTTTGACAAACATG...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | GACACATGCAGCTACGGCAATAACTACACAGACACGGCCATTCGAGGACGGTTTTCACGAATTTTCTTCTaGCTCATTAGGTTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DTCSYGNNYTDTAIRGRFSRIFF*LIRFLP Trigger: TGGAAGAAACCTAATGAGGCAGAAGAAAATTCGTGA...AAACCGTCCTCGAATGGCCGTGTCTGTGTAGTTATTGCCGTAGCTGCATGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | GACACATGCAGCTACGGCAATAACTACACAGACACGGCCATTCGAGGACGGTTTCTGTCCATAAAATGTTaGTTAAAAATCCTGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DTCSYGNNYTDTAIRGRFLSIKC*LKILAQ Trigger: CTGTGCCAGGATTTTTAAGCAACATTTTATGGACAG...AAACCGTCCTCGAATGGCCGTGTCTGTGTAGTTATTGCCGTAGCTGCATGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACAAAAATGTACACCTGTTaGAGGTGCACATGCAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LARYRTHHDTCSYGNNYTKMYTC*RCTCSV Trigger: TACGCTGCATGTGCACCTGCAACAGGTGTACATTTT...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTGCCTGTTAAGAACTaGAGTGAAGATTTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRFHFRWEFSSGQGGFFIVPVKN*SEDFVL Trigger: AAGAACAAAATCTTCACTGCAGTTCTTAACAGGCAC...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTATCATGCCTCCCCCTCTaGATAAAAAGTGTATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVSCLPL*IKSVCK Trigger: TTTACATACACTTTTTATCCAGAGGGGGAGGCATGA...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACAAGTGAAGGCTTGAGGTaGAGGCATTTTGTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LARYRTHHDTCSYGNNYTSEGLR*RHFVFP Trigger: AGGAAACACAAAATGCCTCCACCTCAAGCCTTCACT...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | GAACACTACTGTAGAAATGCCTGGAAACACATTTCTGAAGTCAGTTCAGGAGACCTTCCAAGGAGAGACTaGAGAACTCCAGTTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EHYCRNAWKHISEVSSGDLPRRD*RTPVFP Trigger: TGGGAAAACTGGAGTTCTTCAGTCTCTCCTTGGAAG...GTCTCCTGAACTGACTTCAGAAATGTGTTTCCAGGCATTTCTACAGTAGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAGACTTCATGCAGGTCTaGCTTTGCAGCTACAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: KADLVSCVILKMERNGYRDFMQV*LCSYNQ Trigger: TTGATTGTAGCTGCAAAGTCAGACCTGCATGAAGTC...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTGCTATGTTCCTGTTTaGCTTCATGCAGGTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPCYVPV*LHAGLT Trigger: AGTCAGACCTGCATGAAGTCAAACAGGAACATAGCA...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTCTGAGTCACCTTGCTATGTTCCTGTTTaGCTTCATGCAGGTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LKNGEKRLQKPKDCSESPCYVPV*LHAGLT Trigger: AGTCAGACCTGCATGAAGTCAAACAGGAACATAGCA...AGGTGACTCAGAACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | TTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTTGCTATGTTCCTGTTTaGCTTCATGCAGGTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSWPDTEHIMTHAATAITCYVPV*LHAGLT Trigger: AGTCAGACCTGCATGAAGTCAAACAGGAACATAGCA...AGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | AGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTATGCTATGTTCCTGTTTaGCTTCATGCAGGTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SIQNVHRSMCFGRPVPPLCYVPV*LHAGLT Trigger: AGTCAGACCTGCATGAAGTCAAACAGGAACATAGCA...TAAGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR TCA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNAKPER*ALEVSL Trigger: CAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGC...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTAGATTGCAGCAAGTCTaGGTTGAGGAAGTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPRLQQV*VEEVLT Trigger: TGTCAGAACTTCCTCAACTCAGACTTGCTGCAATCT...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 ENSMUST00000237515.2 |
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| CDS-3UTR GCA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTACTGTCCATAAAATGTTaGTTAAAAATCCTGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVLSIKC*LKILAQ Trigger: CTGTGCCAGGATTTTTAAGCAACATTTTATGGACAG...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | TTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTTCCTGTTTGACTTCATaGAGGTCTGACTTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSWPDTEHIMTHAATAITSCLTS*RSDFAA Trigger: AGCTGCAAAGTCAGACCTGCATGAAGTCAAACAGGA...AGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGATCCTGTTTGACTTCATaGAGGTCTGACTTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KADLVSCVILKMERNGYRSCLTS*RSDFAA Trigger: AGCTGCAAAGTCAGACCTGCATGAAGTCAAACAGGA...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR GCA 90 bp | CTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTCTGAGTCACCTAAAATGTACACCTGTTaGAGGTGCACATGCAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LKNGEKRLQKPKDCSESPKMYTC*RCTCSV Trigger: TACGCTGCATGTGCACCTGCAACAGGTGTACATTTT...AGGTGACTCAGAACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTAAAATGTACACCTGTTaGAGGTGCACATGCAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPKMYTC*RCTCSV Trigger: TACGCTGCATGTGCACCTGCAACAGGTGTACATTTT...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 ENSMUST00000237515.2 |
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| CDS-3UTR GCA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATTGTTGCAGGTGCACATaGAGCGTAACCGGGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNCCRCT*SVTGHG Trigger: TCCATGCCCGGTTACGCTGCATGTGCACCTGCAACA...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077451.14 |
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| CDS-3UTR CCA 90 bp | CTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTAGTGAAGGCTTGAGGTaGAGGCATTTTGTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCDLKNGEKRLQKPKDCSEGLR*RHFVFP Trigger: AGGAAACACAAAATGCCTCCACCTCAAGCCTTCACT...ACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR CCA 90 bp | CTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTCAAAGATATCCTTACTaGGGGCATCAGCAGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLCDLKNGEKRLQKPKDCQRYPY*GHQQYC Trigger: GCAATACTGCTGATGCCCCCAGTAAGGATATCTTTG...ACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR CCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTCAAAGATATCCTTACTaGGGGCATCAGCAGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPQRYPY*GHQQYC Trigger: GCAATACTGCTGATGCCCCCAGTAAGGATATCTTTG...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
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| CDS-3UTR CCA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGACAGCGTAACCGGGCATaGAAAGCAGTTTTTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KADLVSCVILKMERNGYRQRNRA*KAVFRK Trigger: CTTTCTAAAAACTGCTTTCCATGCCCGGTTACGCTG...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077451.14 |
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| CDS-3UTR TCA 90 bp | TCCACATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCAAGAGGCCCTGTAGGATaGAGAACAGCTTTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: STCQSILQSLLGVKYSYARGPVG*RTAFCA Trigger: TGCACAGAAAGCTGTTCTTCATCCTACAGGGCCTCT...TGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCATGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS-3UTR TCA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACAGAGCTAAAGGAGTGTTaGAACAAATTCTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LARYRTHHDTCSYGNNYTELKEC*NKFSGR Trigger: TCTTCCAGAGAATTTGTTTCAACACTCCTTTAGCTC...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS-3UTR TCA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGATGTTACTGTAATGGCTaGAGCTTGAGACTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KADLVSCVILKMERNGYRCYCNG*SLRLLF Trigger: GAACAAGAGTCTCAAGCTTCAGCCATTACAGTAACA...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR TCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTGTTACTGTAATGGCTaGAGCTTGAGACTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPCYCNG*SLRLLF Trigger: GAACAAGAGTCTCAAGCTTCAGCCATTACAGTAACA...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTGAGTTGAGGAAGTTCTaGCAGATGCAAAATGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPELRKF*QMQNVH Trigger: GTGTACATTTTGCATCTGTCAGAACTTCCTCAACTC...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 ENSMUST00000237515.2 |
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| CDS-3UTR CCA 90 bp | TCTAGGTTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCATTGAAACAAATTCTCTaGAAGAAGTTGAGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRLSWPDTEHIMTHAATALKQIL*KKLSSA Trigger: TGCTGAGCTCAACTTCTTCCAGAGAATTTGTTTCAA...TGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAACCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CCA 90 bp | TTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTCTTGTTCCGTCAGTATaGAATAGCCTAGATATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSWPDTEHIMTHAATAITLVPSV*NSLDIP Trigger: TGGGATATCTAGGCTATTCCATACTGACGGAACAAG...AGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | TTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTGAGCTAAAGGAGTGTTaGAACAAATTCTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSWPDTEHIMTHAATAITELKEC*NKFSGR Trigger: TCTTCCAGAGAATTTGTTTCAACACTCCTTTAGCTC...AGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTCTGAGTCACCTGAGCTAAAGGAGTGTTaGAACAAATTCTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKNGEKRLQKPKDCSESPELKEC*NKFSGR Trigger: TCTTCCAGAGAATTTGTTTCAACACTCCTTTAGCTC...AGGTGACTCAGAACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR TCA 90 bp | AGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTAGAGCTAAAGGAGTGTTaGAACAAATTCTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SIQNVHRSMCFGRPVPPLELKEC*NKFSGR Trigger: TCTTCCAGAGAATTTGTTTCAACACTCCTTTAGCTC...TAAGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR TCA 90 bp | GAACACTACTGTAGAAATGCCTGGAAACACATTTCTGAAGTCAGTTCAGGAGACTGTTACTGTAATGGCTaGAGCTTGAGACTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EHYCRNAWKHISEVSSGDCYCNG*SLRLLF Trigger: GAACAAGAGTCTCAAGCTTCAGCCATTACAGTAACA...GTCTCCTGAACTGACTTCAGAAATGTGTTTCCAGGCATTTCTACAGTAGTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATCAGCAGTATTGCAAGTaGAGGCTTGAGGTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MPVNTAVITRSKILLCMNQQYCK*RLEVEA Trigger: TGCCTCCACCTCAAGCCTTCACTTGCAATACTGCTG...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR TCA 90 bp | TCCACATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCACGTGAGATGACTCCATaGAGATGGAATCTTCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: STCQSILQSLLGVKYSYAREMTP*RWNLLR Trigger: CCGTAGAAGATTCCATCTTCATGGAGTCATCTCACG...TGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCATGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAATATCAAAGGCAGCCTaGTGTCTTTGTCTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KADLVSCVILKMERNGYRISKAA*CLCLFF Trigger: AAAGAACAGACAAAGACAGCAGGCTGCCTTTGATAT...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR GCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTATATCAAAGGCAGCCTaGTGTCTTTGTCTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPISKAA*CLCLFF Trigger: AAAGAACAGACAAAGACAGCAGGCTGCCTTTGATAT...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR GCA 90 bp | TCCACATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCAGTCCAAGTAGTCTCATaGCTCCCCCTCTGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: STCQSILQSLLGVKYSYAVQVVS*LPLWIK Trigger: TTTTATCCAGAGGGGGAGGCATGAGACTACTTGGAC...TGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCATGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAGACTCTGAGATATCGTaGAGCAACAAGTATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KADLVSCVILKMERNGYRDSEIS*SNKYFS Trigger: AGAGAAATACTTGTTGCTGCACGATATCTCAGAGTC...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTAGACTCTGAGATATCGTaGAGCAACAAGTATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIQNVHRSMCFGRPVPPLDSEIS*SNKYFS Trigger: AGAGAAATACTTGTTGCTGCACGATATCTCAGAGTC...TAAGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATTGTCTCGGGAGAGGCTaGCTCTGTAATGATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MPVNTAVITRSKILLCMNCLGRG*LCNDPL Trigger: CAGAGGATCATTACAGAGGCAGCCTCTCCCGAGACA...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017831.16 ENSMUST00000077451.14 ENSMUST00000237515.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACAATACTGGTTCATAATTaGAAGGATGGTCTCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: LARYRTHHDTCSYGNNYTILVHN*KDGLHT Trigger: AGTATGGAGACCATCCTTCCAATTATGAACCAGTAT...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CCA 90 bp | CTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTGTGTTATTTACATCTaGTCCCCAAGGTATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLCDLKNGEKRLQKPKDCCVIYI*SPRYVR Trigger: CCTTACATACCTTGGGGACCAGATGTAAATAACACA...ACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | AGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTATGTGTTATTTACATCTaGTCCCCAAGGTATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIQNVHRSMCFGRPVPPLCVIYI*SPRYVR Trigger: CCTTACATACCTTGGGGACCAGATGTAAATAACACA...TAAGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTGTGTTATTTACATCTaGTCCCCAAGGTATGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPCVIYI*SPRYVR Trigger: CCTTACATACCTTGGGGACCAGATGTAAATAACACA...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGGTAGAAACCAAAGGAGCACACTCACATCTGGACAGAGATATTTACCTCAAAGATATCCTTACTaGGGGCATCAGCAGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: KKGRNQRSTLTSGQRYLPQRYPY*GHQQYC Trigger: GCAATACTGCTGATGCCCCCAGTAAGGATATCTTTG...AGGTAAATATCTCTGTCCAGATGTGAGTGTGCTCCTTTGGTTTCTACCTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
||
| CDS-3UTR CCA 90 bp | GAACACTACTGTAGAAATGCCTGGAAACACATTTCTGAAGTCAGTTCAGGAGACTCTGTAATGATCCTCTaGGTACATGGCCATTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EHYCRNAWKHISEVSSGDSVMIL*VHGHCC Trigger: ACAACAATGGCCATGTACCCAGAGGATCATTACAGA...GTCTCCTGAACTGACTTCAGAAATGTGTTTCCAGGCATTTCTACAGTAGTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017831.16 ENSMUST00000077451.14 |
||
| CDS-3UTR TCA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATAGAACGTTGAGCTCTTaGGGTCAGCTTGTGTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: MPVNTAVITRSKILLCMNRTLSS*GQLVSR Trigger: ACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCT...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR GCA 90 bp | TTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTCATGTTTGTCAAAGGTaGTCTGGAGAAACAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: LSWPDTEHIMTHAATAITHVCQR*SGETNM Trigger: CATATTTGTTTCTCCAGAGCACCTTTGACAAACATG...AGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTCTGAGTCACCTCATGTTTGTCAAAGGTaGTCTGGAGAAACAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: LKNGEKRLQKPKDCSESPHVCQR*SGETNM Trigger: CATATTTGTTTCTCCAGAGCACCTTTGACAAACATG...AGGTGACTCAGAACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTCACGAATTTTCTTCTaGCTCATTAGGTTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPSRIFF*LIRFLP Trigger: TGGAAGAAACCTAATGAGGCAGAAGAAAATTCGTGA...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTCTGTCCATAAAATGTTaGTTAAAAATCCTGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LLCDLKNGEKRLQKPKDCLSIKC*LKILAQ Trigger: CTGTGCCAGGATTTTTAAGCAACATTTTATGGACAG...ACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTCTGTCCATAAAATGTTaGTTAAAAATCCTGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPLSIKC*LKILAQ Trigger: CTGTGCCAGGATTTTTAAGCAACATTTTATGGACAG...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | ACATTTCTGAAGTCAGTTCAGGAGACCGTATCTTGCTTGAATATGTACATTATTAGCAAAGCCCACGACTaGAAAGACCGTAGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TFLKSVQETVSCLNMYIISKAHD*KDRSTK Trigger: TTTGGTGCTACGGTCTTTGCAGTCGTGGGCTTTGCT...AATAATGTACATATTCAAGCAAGATACGGTCTCCTGAACTGACTTCAGAAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATAGCAAAGCCCACGACTaGAAAGACCGTAGCACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MPVNTAVITRSKILLCMNSKAHD*KDRSTK Trigger: TTTGGTGCTACGGTCTTTGCAGTCGTGGGCTTTGCT...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTATACTGGTTCATAATTaGAAGGATGGTCTCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPILVHN*KDGLHT Trigger: AGTATGGAGACCATCCTTCCAATTATGAACCAGTAT...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CCA 90 bp | TCCACATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCACAAAGATATCCTTACTaGGGGCATCAGCAGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: STCQSILQSLLGVKYSYAQRYPY*GHQQYC Trigger: GCAATACTGCTGATGCCCCCAGTAAGGATATCTTTG...TGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCATGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR TCA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATGACTTCATGCAGGTCTaGCTTTGCAGCTACAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNDFMQV*LCSYNQ Trigger: TTGATTGTAGCTGCAAAGTCAGACCTGCATGAAGTC...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | TCCACATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCAGAGTTGAGGAAGTTCTaGCAGATGCAAAATGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: STCQSILQSLLGVKYSYAELRKF*QMQNVH Trigger: GTGTACATTTTGCATCTGTCAGAACTTCCTCAACTC...TGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCATGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 ENSMUST00000237515.2 |
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| CDS-3UTR TCA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATAGATTGCAGCAAGTCTaGGTTGAGGAAGTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNRLQQV*VEEVLT Trigger: TGTCAGAACTTCCTCAACTCAGACTTGCTGCAATCT...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
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| CDS-3UTR TCA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATAAGCTGACCGTGAGATaGCTCCATGAAGATGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: MPVNTAVITRSKILLCMNKLTVR*LHEDGI Trigger: GATTCCATCTTCATGGAGTCATCTCACGGTCAGCTT...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
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| CDS-3UTR GCA 90 bp | GAACACTACTGTAGAAATGCCTGGAAACACATTTCTGAAGTCAGTTCAGGAGACGTGCCTGTTAAGAACTaGAGTGAAGATTTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EHYCRNAWKHISEVSSGDVPVKN*SEDFVL Trigger: AAGAACAAAATCTTCACTGCAGTTCTTAACAGGCAC...GTCTCCTGAACTGACTTCAGAAATGTGTTTCCAGGCATTTCTACAGTAGTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
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| CDS-3UTR CCA 90 bp | AAGAAAGGTAGAAACCAAAGGAGCACACTCACATCTGGACAGAGATATTTACCTTCATGCCTCCCCCTCTaGATAAAAAGTGTATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKGRNQRSTLTSGQRYLPSCLPL*IKSVCK Trigger: TTTACATACACTTTTTATCCAGAGGGGGAGGCATGA...AGGTAAATATCTCTGTCCAGATGTGAGTGTGCTCCTTTGGTTTCTACCTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
||
| CDS-3UTR CCA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATCAAAGATATCCTTACTaGGGGCATCAGCAGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNQRYPY*GHQQYC Trigger: GCAATACTGCTGATGCCCCCAGTAAGGATATCTTTG...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | TCCACATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATCTGTAATGATCCTCTaGGTACATGGCCATTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: STCQSILQSLLGVKYSYASVMIL*VHGHCC Trigger: ACAACAATGGCCATGTACCCAGAGGATCATTACAGA...TGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCATGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017831.16 ENSMUST00000077451.14 ENSMUST00000237515.2 |
||
| CDS-3UTR TCA 90 bp | ACATTTCTGAAGTCAGTTCAGGAGACCGTATCTTGCTTGAATATGTACATTATTGACTTCATGCAGGTCTaGCTTTGCAGCTACAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: TFLKSVQETVSCLNMYIIDFMQV*LCSYNQ Trigger: TTGATTGTAGCTGCAAAGTCAGACCTGCATGAAGTC...AATAATGTACATATTCAAGCAAGATACGGTCTCCTGAACTGACTTCAGAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATAGATTGCAGCAAGTCTaGGTTGAGGAAGTTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: MPVNTAVITRSKILLCMNRLQQV*VEEVLT Trigger: TGTCAGAACTTCCTCAACTCAGACTTGCTGCAATCT...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR GCA 90 bp | TCCACATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCAGACTCTGAGATATCGTaGAGCAACAAGTATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: STCQSILQSLLGVKYSYADSEIS*SNKYFS Trigger: AGAGAAATACTTGTTGCTGCACGATATCTCAGAGTC...TGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCATGTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | AAGAAAGGTAGAAACCAAAGGAGCACACTCACATCTGGACAGAGATATTTACCTCTGTCCATAAAATGTTaGTTAAAAATCCTGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KKGRNQRSTLTSGQRYLPLSIKC*LKILAQ Trigger: CTGTGCCAGGATTTTTAAGCAACATTTTATGGACAG...AGGTAAATATCTCTGTCCAGATGTGAGTGTGCTCCTTTGGTTTCTACCTTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
||
| CDS-3UTR GCA 90 bp | ACATTTCTGAAGTCAGTTCAGGAGACCGTATCTTGCTTGAATATGTACATTATTTCCTGTTTGACTTCATaGAGGTCTGACTTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFLKSVQETVSCLNMYIISCLTS*RSDFAA Trigger: AGCTGCAAAGTCAGACCTGCATGAAGTCAAACAGGA...AATAATGTACATATTCAAGCAAGATACGGTCTCCTGAACTGACTTCAGAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | ACATTTCTGAAGTCAGTTCAGGAGACCGTATCTTGCTTGAATATGTACATTATTAAAATGTACACCTGTTaGAGGTGCACATGCAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: TFLKSVQETVSCLNMYIIKMYTC*RCTCSV Trigger: TACGCTGCATGTGCACCTGCAACAGGTGTACATTTT...AATAATGTACATATTCAAGCAAGATACGGTCTCCTGAACTGACTTCAGAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGGTAGAAACCAAAGGAGCACACTCACATCTGGACAGAGATATTTACCTATACTGGTTCATAATTaGAAGGATGGTCTCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: KKGRNQRSTLTSGQRYLPILVHN*KDGLHT Trigger: AGTATGGAGACCATCCTTCCAATTATGAACCAGTAT...AGGTAAATATCTCTGTCCAGATGTGAGTGTGCTCCTTTGGTTTCTACCTTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
||
| CDS-3UTR CCA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATAGTGAAGGCTTGAGGTaGAGGCATTTTGTGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MPVNTAVITRSKILLCMNSEGLR*RHFVFP Trigger: AGGAAACACAAAATGCCTCCACCTCAAGCCTTCACT...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATCAGCGTAACCGGGCATaGAAAGCAGTTTTTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MPVNTAVITRSKILLCMNQRNRA*KAVFRK Trigger: CTTTCTAAAAACTGCTTTCCATGCCCGGTTACGCTG...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077451.14 ENSMUST00000237515.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATTGTTACTGTAATGGCTaGAGCTTGAGACTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MPVNTAVITRSKILLCMNCYCNG*SLRLLF Trigger: GAACAAGAGTCTCAAGCTTCAGCCATTACAGTAACA...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATGAGTTGAGGAAGTTCTaGCAGATGCAAAATGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: MPVNTAVITRSKILLCMNELRKF*QMQNVH Trigger: GTGTACATTTTGCATCTGTCAGAACTTCCTCAACTC...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATTCATGCCTCCCCCTCTaGATAAAAAGTGTATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNSCLPL*IKSVCK Trigger: TTTACATACACTTTTTATCCAGAGGGGGAGGCATGA...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATCATGTTTGTCAAAGGTaGTCTGGAGAAACAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNHVCQR*SGETNM Trigger: CATATTTGTTTCTCCAGAGCACCTTTGACAAACATG...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATTCACGAATTTTCTTCTaGCTCATTAGGTTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNSRIFF*LIRFLP Trigger: TGGAAGAAACCTAATGAGGCAGAAGAAAATTCGTGA...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATGACTCTGAGATATCGTaGAGCAACAAGTATTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MPVNTAVITRSKILLCMNDSEIS*SNKYFS Trigger: AGAGAAATACTTGTTGCTGCACGATATCTCAGAGTC...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATTCATGCCTCCCCCTCTaGATAAAAAGTGTATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: MPVNTAVITRSKILLCMNSCLPL*IKSVCK Trigger: TTTACATACACTTTTTATCCAGAGGGGGAGGCATGA...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR GCA 90 bp | ACATTTCTGAAGTCAGTTCAGGAGACCGTATCTTGCTTGAATATGTACATTATTCATGTTTGTCAAAGGTaGTCTGGAGAAACAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: TFLKSVQETVSCLNMYIIHVCQR*SGETNM Trigger: CATATTTGTTTCTCCAGAGCACCTTTGACAAACATG...AATAATGTACATATTCAAGCAAGATACGGTCTCCTGAACTGACTTCAGAAATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTCTGAAGTCAGTTCAGGAGACCGTATCTTGCTTGAATATGTACATTATTATACTGGTTCATAATTaGAAGGATGGTCTCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: TFLKSVQETVSCLNMYIIILVHN*KDGLHT Trigger: AGTATGGAGACCATCCTTCCAATTATGAACCAGTAT...AATAATGTACATATTCAAGCAAGATACGGTCTCCTGAACTGACTTCAGAAATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGCAGGCAGGGCAGGCAGACCTCAGAGATCGCCGTCACAGCCCTCTAAGGCTCTTGAGGTCAGCTaGTGTCACGTGCGGGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: RRAGRAGRPQRSPSQPSKALEVS*CHVRVH Trigger: ATGTACCCGCACGTGACACAAGCTGACCTCAAGAGC...CTTAGAGGGCTGTGACGGCGATCTCTGAGGTCTGCCTGCCCTGCCTGCCCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092857.13 |
||
| CDS TCA 90 bp | GACTGCAAAGACCGTAGCACCAAAGCTTGCGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTGTGTCACGTGCGGGTACATGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DCKDRSTKACAKPER*ALEVSLCHVRVHGH Trigger: ATGGCCATGTACCCGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGCTACGGTCTTTGCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | CAATGTGGTGACACAGGTAACCTCCGCCACCTGCTCCTGCCTCAGGCCCTCAGCTTTCTAACCACATTCTaGACATCTTCCAGCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QCGDTGNLRHLLLPQALSFLTTF*TSSSAC Trigger: GCAAGCGCTGGAAGATGTCAAGAATGTGGTTAGAAA...GCTGAGGGCCTGAGGCAGGAGCAGGTGGCGGAGGTTACCTGTGTCACCACATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS TCA 90 bp | GATATCCCAAATACTCCAGGCAACGCTGCACATCTAAGTAGGTGGTaGGCGTCCACTGGGAGAGGAACCCCTGGTAGGTTATCCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DIPNTPGNAAHLSRW*ASTGRGTPGRLSSL Trigger: GAGGCTGGATAACCTACCAGGGGTTCCTCTCCCAGTGGACGCTCACCACCTACTTAGATGTGCAGCGTTGCCTGGAGTATTTGGGATATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS TCA 90 bp | TCCATGAAGATGGAATCTTCTACGGAGCTGACGGCGTGCACCTGGTaGGTAATACTGCCTTCGTCGTCTGCTAACAGCATGGCACCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SMKMESSTELTACTW*VILPSSSANSMAPH Trigger: GTGGGGTGCCATGCTGTTAGCAGACGACGAAGGCAGTATTACTCACCAGGTGCACGCCGTCAGCTCCGTAGAAGATTCCATCTTCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGCAGGCAGGGCAGGCAGACCTCAGAGATCGCCGTCACAGCCCTCTAAGGGAGCTAAAGGAGTGTaGAAACAAATTCTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRAGRAGRPQRSPSQPSKGAKGV*KQILWK Trigger: CTTCCAGAGAATTTGTTTCAACACTCCTTTAGCTCC...CTTAGAGGGCTGTGACGGCGATCTCTGAGGTCTGCCTGCCCTGCCTGCCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
||
| CDS TCA 90 bp | GACTGCAAAGACCGTAGCACCAAAGCTTGCGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTGTGTCACGTGCCTGTTAAGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: DCKDRSTKACAKPER*ALEVSLCHVPVKNC Trigger: GCAGTTCTTAACAGGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGCTACGGTCTTTGCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS TCA 90 bp | GACTGCAAAGACCGTAGCACCAAAGCTTGCGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTGTGTCACGTGCCTGTCATCAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DCKDRSTKACAKPER*ALEVSLCHVPVIKK Trigger: TTTCTTGATGACAGGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGCTACGGTCTTTGCAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
||
| CDS GCA 90 bp | AAACCTCTGAGCGTCAGCCCACTGTCAGCCACACCGTCACTTAAGTaGTTTCTAACCACATTCTTGACATCTTCCAGCGCTTGCGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KPLSVSPLSATPSLK*FLTTFLTSSSACGA Trigger: AGCTCCGCAAGCGCTGGAAGATGTCAAGAATGTGGTTAGAAAGCACTTAAGTGACGGTGTGGCTGACAGTGGGCTGACGCTCAGAGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | CAATGTGGTGACACAGGTAACCTCCGCCACCTGCTCCTGCCTCAGGCCCTCAGCTCCAGCCTCTTTCATTaGTGCAAACTGTGTTATTTA | + |
|
Preference number: 5 (lower is better) Translates to: QCGDTGNLRHLLLPQALSSSLFH*CKLCYL Trigger: TAAATAACACAGTTTGCACAAATGAAAGAGGCTGGA...GCTGAGGGCCTGAGGCAGGAGCAGGTGGCGGAGGTTACCTGTGTCACCACATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGCAGAACGTTGAGCTCTaGAGGTCAGCTTGTGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: QLHNFLGFMMALKPAYRKQNVEL*RSACVT Trigger: CGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTG...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGCTCTTGAGGTCAGCTaGTGTCACGTGCCTGTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRFHFRWEFSSGQGGFFIALEVS*CHVPVK Trigger: CTTAACAGGCACGTGACACAAGCTGACCTCAAGAGC...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGGCTCTTGAGGTCAGCTaGTGTCACGTGCCTGTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QLHNFLGFMMALKPAYRKALEVS*CHVPVK Trigger: CTTAACAGGCACGTGACACAAGCTGACCTCAAGAGC...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS TCA 90 bp | AGCTTGTGTCACGTGCCTGTCATCAAGAAAAAGCTGACCGTGAGATaGCTCCATGAAGATGGAATCTTCTACGGAGCTGACGGCGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLCHVPVIKKKLTVR*LHEDGIFYGADGVH Trigger: GTGCACGCCGTCAGCTCCGTAGAAGATTCCATCTTCATGGAGTCATCTCACGGTCAGCTTTTTCTTGATGACAGGCACGTGACACAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
||
| CDS-3UTR CAA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTCATGCAGGTCTGACTTaGCAGCTACAATCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRFHFRWEFSSGQGGFFIHAGLT*QLQSSR Trigger: CCTGCTTGATTGTAGCTGCAAAGTCAGACCTGCATG...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | GACACATGCAGCTACGGCAATAACTACACAGACACGGCCATTCGAGGACGGTTTCATGCAGGTCTGACTTaGCAGCTACAATCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DTCSYGNNYTDTAIRGRFHAGLT*QLQSSR Trigger: CCTGCTTGATTGTAGCTGCAAAGTCAGACCTGCATG...AAACCGTCCTCGAATGGCCGTGTCTGTGTAGTTATTGCCGTAGCTGCATGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTACATGCAGGTCTGACTTaGCAGCTACAATCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVHAGLT*QLQSSR Trigger: CCTGCTTGATTGTAGCTGCAAAGTCAGACCTGCATG...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | ACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTCATGCAGGTCTGACTTaGCAGCTACAATCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVSLQVGIQQWSGRLLYCHAGLT*QLQSSR Trigger: CCTGCTTGATTGTAGCTGCAAAGTCAGACCTGCATG...ACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | TCTAGGTTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAGCTCTTGAGGTCAGCTaGTGTCACGTGCCTGTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRLSWPDTEHIMTHAATAALEVS*CHVPVK Trigger: CTTAACAGGCACGTGACACAAGCTGACCTCAAGAGC...TGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAACCTAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGATGCTATGTTCCTGTTaGACTTCATGCAGGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QLHNFLGFMMALKPAYRKMLCSC*TSCRSD Trigger: GTCAGACCTGCATGAAGTCAAACAGGAACATAGCAT...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACACAGAACGTTGAGCTCTaGAGGTCAGCTTGTGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: LARYRTHHDTCSYGNNYTQNVEL*RSACVT Trigger: CGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTG...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTGCTCTTGAGGTCAGCTaGTGTCACGTGCCTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPALEVS*CHVPVI Trigger: GATGACAGGCACGTGACACAAGCTGACCTCAAGAGC...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
||
| CDS GCA 90 bp | TCAAATTCTCTATTCTATCAGTGCTGCCCATGTCTCGGGAGAGGCTaGCTCTGTAATGATCCTCTGGGTACATGGCCATTGTTGTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: SNSLFYQCCPCLGRG*LCNDPLGTWPLLST Trigger: AGTTGACAACAATGGCCATGTACCCAGAGGATCATTACAGAGGCAGCCTCTCCCGAGACATGGGCAGCACTGATAGAATAGAGAATTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017831.16 ENSMUST00000077451.14 ENSMUST00000237515.2 |
||
| CDS-3UTR CAA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTATTCTCTGGAAGAAGTaGAGCTCAGCATCATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRFHFRWEFSSGQGGFFIILWKK*SSASFR Trigger: TCTGAATGATGCTGAGCTCAACTTCTTCCAGAGAAT...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGGGAGCTAAAGGAGTGTaGAAACAAATTCTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QLHNFLGFMMALKPAYRKGAKGV*KQILWK Trigger: CTTCCAGAGAATTTGTTTCAACACTCCTTTAGCTCC...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | GGACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGGAGCTAAAGGAGTGTaGAAACAAATTCTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRFHFRWEFSSGQGGFFIGAKGV*KQILWK Trigger: CTTCCAGAGAATTTGTTTCAACACTCCTTTAGCTCC...AATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | CAGCTCCACAACTTTCTAGGTTTCATGATGGCTTTGAAGCCGGCCTACCGCAAGTCAAAGGATTTGGGATaGGTGACATCATATACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLHNFLGFMMALKPAYRKSKDLG*VTSYTR Trigger: CCTGGTATATGATGTCACCAATCCCAAATCCTTTGA...CTTGCGGTAGGCCGGCTTCAAAGCCATCATGAAACCTAGAAAGTTGTGGAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAGCTCTTGAGGTCAGCTaGTGTCACGTGCAAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KADLVSCVILKMERNGYRALEVS*CHVQSS Trigger: ACTGCTTTGCACGTGACACAAGCTGACCTCAAGAGC...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017831.16 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGACAGAACGTTGAGCTCTaGAGGTCAGCTTGTGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: KADLVSCVILKMERNGYRQNVEL*RSACVT Trigger: CGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTG...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS TCA 90 bp | AAGATATCCTTACTGGGGGCATCAGCAGTATTGCAAGTGAAGGCTTaGGGTGGAGGCATTTTGTGTTTCCTGCAGAAATCAGTAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KISLLGASAVLQVKA*GGGILCFLQKSVGE Trigger: CTCACCTACTGATTTCTGCAGGAAACACAAAATGCCTCCACCTCAAGCCTTCACTTGCAATACTGCTGATGCCCCCAGTAAGGATATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR CAA 90 bp | GACACATGCAGCTACGGCAATAACTACACAGACACGGCCATTCGAGGACGGTTTGCTGTCCATAAAATGTaGCTTAAAAATCCTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: DTCSYGNNYTDTAIRGRFAVHKM*LKNPGT Trigger: TGTGCCAGGATTTTTAAGCAACATTTTATGGACAGC...AAACCGTCCTCGAATGGCCGTGTCTGTGTAGTTATTGCCGTAGCTGCATGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS GCA 90 bp | ACTGGGAGAGGAACCCCTGGTAGGTTATCCAGCCTCTTTCATTTGTaGAAACTGTGTTATTTACATCTGGTCCCCAAGGTATGTAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TGRGTPGRLSSLFHL*KLCYLHLVPKVCKE Trigger: TTCCTTACATACCTTGGGGACCAGATGTAAATAACACAGTTTGCACAAATGAAAGAGGCTGGATAACCTACCAGGGGTTCCTCTCCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS GCA 90 bp | CTGCAGAAATCAGTAGGTGAGATGCTATGTTCCTGTTTGACTTCATaGAGGTCTGACTTTGCAGCTACAATCAAGCAGGGAATTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQKSVGEMLCSCLTS*RSDFAATIKQGILL Trigger: CAGCAGAATTCCCTGCTTGATTGTAGCTGCAAAGTCAGACCTGCATGAAGTCAAACAGGAACATAGCATCTCACCTACTGATTTCTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS GCA 90 bp | TTAGAAAGACCCAGATTTTTCTCAAATTCTCTATTCTATCAGTGCTaGCCATGTCTCGGGAGAGGCTGCCTCTGTAATGATCCTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LERPRFFSNSLFYQC*PCLGRGCLCNDPLG Trigger: ACCCAGAGGATCATTACAGAGGCAGCCTCTCCCGAGACATGGGCAGCACTGATAGAATAGAGAATTTGAGAAAAATCTGGGTCTTTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017831.16 ENSMUST00000077451.14 ENSMUST00000237515.2 |
||
| CDS-3UTR CAA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTATCCACCAGATCAGATTaGTTCCCAACCAATATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVSTRSD*FPTNIK Trigger: TTTGATATTGGTTGGGAACAAATCTGATCTGGTGGA...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | GACACATGCAGCTACGGCAATAACTACACAGACACGGCCATTCGAGGACGGTTTTCCAGCCTCTTTCATTaGTGCAAACTGTGTTATTTA | + |
|
Preference number: 5 (lower is better) Translates to: DTCSYGNNYTDTAIRGRFSSLFH*CKLCYL Trigger: TAAATAACACAGTTTGCACAAATGAAAGAGGCTGGA...AAACCGTCCTCGAATGGCCGTGTCTGTGTAGTTATTGCCGTAGCTGCATGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | GACACATGCAGCTACGGCAATAACTACACAGACACGGCCATTCGAGGACGGTTTCAGTATTCAAAGGATTaGGGATTGGTGACATCATAT | + |
|
Preference number: 5 (lower is better) Translates to: DTCSYGNNYTDTAIRGRFQYSKD*GLVTSY Trigger: ATATGATGTCACCAATCCCAAATCCTTTGAATACTG...AAACCGTCCTCGAATGGCCGTGTCTGTGTAGTTATTGCCGTAGCTGCATGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACAATGCTATGTTCCTGTTaGACTTCATGCAGGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LARYRTHHDTCSYGNNYTMLCSC*TSCRSD Trigger: GTCAGACCTGCATGAAGTCAAACAGGAACATAGCAT...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | CGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTGCAGTGAAGATTTaGTTCTTTACAGATTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFHFRWEFSSGQGGFFIVTAVKI*FFTDCS Trigger: GCTGCAATCTGTAAAGAACAAAATCTTCACTGCAGT...TACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACAGGAGCTAAAGGAGTGTaGAAACAAATTCTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LARYRTHHDTCSYGNNYTGAKGV*KQILWK Trigger: CTTCCAGAGAATTTGTTTCAACACTCCTTTAGCTCC...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | CTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTTTCTAACCACATTCTaGACATCTTCCAGCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLCDLKNGEKRLQKPKDCFLTTF*TSSSAC Trigger: GCAAGCGCTGGAAGATGTCAAGAATGTGGTTAGAAA...ACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTCTGAGTCACCTCTGTCCAAATCATGTTaGTCAAAGGTGCTCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LKNGEKRLQKPKDCSESPLSKSC*SKVLWR Trigger: TCTCCAGAGCACCTTTGACAAACATGATTTGGACAG...AGGTGACTCAGAACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTCTGTCCAAATCATGTTaGTCAAAGGTGCTCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPLSKSC*SKVLWR Trigger: TCTCCAGAGCACCTTTGACAAACATGATTTGGACAG...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | AGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTACTGTCCAAATCATGTTaGTCAAAGGTGCTCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SIQNVHRSMCFGRPVPPLLSKSC*SKVLWR Trigger: TCTCCAGAGCACCTTTGACAAACATGATTTGGACAG...TAAGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | ACGGTTTCACTTCAGGTGGGAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTTCCAGCCTCTTTCATTaGTGCAAACTGTGTTATTTA | + |
|
Preference number: 5 (lower is better) Translates to: TVSLQVGIQQWSGRLLYCSSLFH*CKLCYL Trigger: TAAATAACACAGTTTGCACAAATGAAAGAGGCTGGA...ACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACCTGAAGTGAAACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTACACATCAAAGGATTTGGGATaGGTGACATCATATACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LARYRTHHDTCSYGNNYTSKDLG*VTSYTR Trigger: CCTGGTATATGATGTCACCAATCCCAAATCCTTTGA...TGTGTAGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | AGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTAATGCTATGTTCCTGTTaGACTTCATGCAGGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SIQNVHRSMCFGRPVPPLMLCSC*TSCRSD Trigger: GTCAGACCTGCATGAAGTCAAACAGGAACATAGCAT...TAAGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTATGCTATGTTCCTGTTaGACTTCATGCAGGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPMLCSC*TSCRSD Trigger: GTCAGACCTGCATGAAGTCAAACAGGAACATAGCAT...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR CAA 90 bp | TCCACATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCACAGAACGTTGAGCTCTaGAGGTCAGCTTGTGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: STCQSILQSLLGVKYSYAQNVEL*RSACVT Trigger: CGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTG...TGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCATGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS TCA 90 bp | ATTTTGTTCTTTACAGATTGCAGCAAGTCTGAGTTGAGGAAGTTCTaGCAGATGCAAAATGTACACCTGTTGCAGGTGCACATGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ILFFTDCSKSELRKF*QMQNVHLLQVHMQR Trigger: ACGCTGCATGTGCACCTGCAACAGGTGTACATTTTGCATCTGTCAGAACTTCCTCAACTCAGACTTGCTGCAATCTGTAAAGAACAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 ENSMUST00000237515.2 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTATTCTCTGGAAGAAGTaGAGCTCAGCATCATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPILWKK*SSASFR Trigger: TCTGAATGATGCTGAGCTCAACTTCTTCCAGAGAAT...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGACCTCGTCTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGATCAAAGGATTTGGGATaGGTGACATCATATACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KADLVSCVILKMERNGYRSKDLG*VTSYTR Trigger: CCTGGTATATGATGTCACCAATCCCAAATCCTTTGA...TCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAGACGAGGTCAGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR CAA 90 bp | TCTAGGTTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCACAGTATTCAAAGGATTaGGGATTGGTGACATCATAT | + |
|
Preference number: 5 (lower is better) Translates to: SRLSWPDTEHIMTHAATAQYSKD*GLVTSY Trigger: ATATGATGTCACCAATCCCAAATCCTTTGAATACTG...TGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAACCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR CAA 90 bp | GAACACTACTGTAGAAATGCCTGGAAACACATTTCTGAAGTCAGTTCAGGAGACATGCTATGTTCCTGTTaGACTTCATGCAGGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: EHYCRNAWKHISEVSSGDMLCSC*TSCRSD Trigger: GTCAGACCTGCATGAAGTCAAACAGGAACATAGCAT...GTCTCCTGAACTGACTTCAGAAATGTGTTTCCAGGCATTTCTACAGTAGTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS GCA 90 bp | TCACTTAAGTGCTTTCTAACCACATTCTTGACATCTTCCAGCGCTTaGGGAGCTAAAGGAGTGTTGAAACAAATTCTCTGGAAGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLKCFLTTFLTSSSA*GAKGVLKQILWKKL Trigger: CAACTTCTTCCAGAGAATTTGTTTCAACACTCCTTTAGCTCCGCAAGCGCTGGAAGATGTCAAGAATGTGGTTAGAAAGCACTTAAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS-3UTR CAA 90 bp | AGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTATCCACCAGATCAGATTaGTTCCCAACCAATATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SIQNVHRSMCFGRPVPPLSTRSD*FPTNIK Trigger: TTTGATATTGGTTGGGAACAAATCTGATCTGGTGGA...TAAGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTCCACCAGATCAGATTaGTTCCCAACCAATATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPSTRSD*FPTNIK Trigger: TTTGATATTGGTTGGGAACAAATCTGATCTGGTGGA...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | AGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTTAGCTGTCCATAAAATGTaGCTTAAAAATCCTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SIQNVHRSMCFGRPVPPLAVHKM*LKNPGT Trigger: TGTGCCAGGATTTTTAAGCAACATTTTATGGACAGC...TAAGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | TTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTGCTGTCCATAAAATGTaGCTTAAAAATCCTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSWPDTEHIMTHAATAITAVHKM*LKNPGT Trigger: TGTGCCAGGATTTTTAAGCAACATTTTATGGACAGC...AGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATCATGCAGGTCTGACTTaGCAGCTACAATCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNHAGLT*QLQSSR Trigger: CCTGCTTGATTGTAGCTGCAAAGTCAGACCTGCATG...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATCAGAACGTTGAGCTCTaGAGGTCAGCTTGTGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: MPVNTAVITRSKILLCMNQNVEL*RSACVT Trigger: CGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTG...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCATTCAGAATGTACATAGAAGTATGTGTTTTGGTAGGCCGGTGCCTCCCTACTGCAGTGAAGATTTaGTTCTTTACAGATTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KAFRMYIEVCVLVGRCLPTAVKI*FFTDCS Trigger: GCTGCAATCTGTAAAGAACAAAATCTTCACTGCAGT...AGGGAGGCACCGGCCTACCAAAACACATACTTCTATGTACATTCTGAATGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 ENSMUST00000237515.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTACTGCAGTGAAGATTTaGTTCTTTACAGATTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLCDLKNGEKRLQKPKDCTAVKI*FFTDCS Trigger: GCTGCAATCTGTAAAGAACAAAATCTTCACTGCAGT...ACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | GAACACTACTGTAGAAATGCCTGGAAACACATTTCTGAAGTCAGTTCAGGAGACTATTCTTTAGGTTTTTaGCTGAACACTCCACACAGG | + |
|
Preference number: 5 (lower is better) Translates to: EHYCRNAWKHISEVSSGDYSLGF*LNTPHR Trigger: CCTGTGTGGAGTGTTCAGCAAAAAACCTAAAGAATA...GTCTCCTGAACTGACTTCAGAAATGTGTTTCCAGGCATTTCTACAGTAGTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | CTCCTGTGTGATCTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTCAGTATTCAAAGGATTaGGGATTGGTGACATCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LLCDLKNGEKRLQKPKDCQYSKD*GLVTSY Trigger: ATATGATGTCACCAATCCCAAATCCTTTGAATACTG...ACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAGATCACACAGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | TTATCCTGGCCAGATACAGAACACATCATGACACATGCAGCTACGGCAATAACTCAGTATTCAAAGGATTaGGGATTGGTGACATCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LSWPDTEHIMTHAATAITQYSKD*GLVTSY Trigger: ATATGATGTCACCAATCCCAAATCCTTTGAATACTG...AGTTATTGCCGTAGCTGCATGTGTCATGATGTGTTCTGTATCTGGCCAGGATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAATGGAGAGAAACGGCTACAGAAGCCGAAGGATTGTTCTGAGTCACCTCAGTATTCAAAGGATTaGGGATTGGTGACATCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LKNGEKRLQKPKDCSESPQYSKD*GLVTSY Trigger: ATATGATGTCACCAATCCCAAATCCTTTGAATACTG...AGGTGACTCAGAACAATCCTTCGGCTTCTGTAGCCGTTTCTCTCCATTTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
||
| CDS-3UTR CAA 90 bp | AAGAAAGGTAGAAACCAAAGGAGCACACTCACATCTGGACAGAGATATTTACCTGCTGTCCATAAAATGTaGCTTAAAAATCCTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: KKGRNQRSTLTSGQRYLPAVHKM*LKNPGT Trigger: TGTGCCAGGATTTTTAAGCAACATTTTATGGACAGC...AGGTAAATATCTCTGTCCAGATGTGAGTGTGCTCCTTTGGTTTCTACCTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055056.16 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATATTCTCTGGAAGAAGTaGAGCTCAGCATCATTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNILWKK*SSASFR Trigger: TCTGAATGATGCTGAGCTCAACTTCTTCCAGAGAAT...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATTTTCTAACCACATTCTaGACATCTTCCAGCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: MPVNTAVITRSKILLCMNFLTTF*TSSSAC Trigger: GCAAGCGCTGGAAGATGTCAAGAATGTGGTTAGAAA...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
||
| CDS-3UTR CAA 90 bp | ACATTTCTGAAGTCAGTTCAGGAGACCGTATCTTGCTTGAATATGTACATTATTTTTCTAACCACATTCTaGACATCTTCCAGCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TFLKSVQETVSCLNMYIIFLTTF*TSSSAC Trigger: GCAAGCGCTGGAAGATGTCAAGAATGTGGTTAGAAA...AATAATGTACATATTCAAGCAAGATACGGTCTCCTGAACTGACTTCAGAAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS-3UTR CAA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATCTGTCCAAATCATGTTaGTCAAAGGTGCTCTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: MPVNTAVITRSKILLCMNLSKSC*SKVLWR Trigger: TCTCCAGAGCACCTTTGACAAACATGATTTGGACAG...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR CAA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATTCAAAGGATTTGGGATaGGTGACATCATATACCAGG | + |
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Preference number: 5 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNSKDLG*VTSYTR Trigger: CCTGGTATATGATGTCACCAATCCCAAATCCTTTGA...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR CAA 90 bp | TCCACATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCAACTGCAGTGAAGATTTaGTTCTTTACAGATTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: STCQSILQSLLGVKYSYATAVKI*FFTDCS Trigger: GCTGCAATCTGTAAAGAACAAAATCTTCACTGCAGT...TGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCATGTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 ENSMUST00000237515.2 |
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| CDS-3UTR CAA 90 bp | TCCACATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATCCAGCCTCTTTCATTaGTGCAAACTGTGTTATTTA | + |
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Preference number: 5 (lower is better) Translates to: STCQSILQSLLGVKYSYASSLFH*CKLCYL Trigger: TAAATAACACAGTTTGCACAAATGAAAGAGGCTGGA...TGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCATGTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR CAA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATTCAAAGGATTTGGGATaGGTGACATCATATACCAGG | + |
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Preference number: 5 (lower is better) Translates to: MPVNTAVITRSKILLCMNSKDLG*VTSYTR Trigger: CCTGGTATATGATGTCACCAATCCCAAATCCTTTGA...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR CAA 90 bp | GAATTCAGCAGTGGTCAGGGCGGCTTCTTTATTGTAACTAAAAACATTGATAATGCTGTCCATAAAATGTaGCTTAAAAATCCTGGCACA | + |
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Preference number: 5 (lower is better) Translates to: EFSSGQGGFFIVTKNIDNAVHKM*LKNPGT Trigger: TGTGCCAGGATTTTTAAGCAACATTTTATGGACAGC...ATTATCAATGTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS-3UTR CAA 90 bp | ATGCCAGTCAATACTGCAGTCATTACTAGGAGTAAAATACTCTTATGCATGAATTCCACCAGATCAGATTaGTTCCCAACCAATATCAAA | + |
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Preference number: 5 (lower is better) Translates to: MPVNTAVITRSKILLCMNSTRSD*FPTNIK Trigger: TTTGATATTGGTTGGGAACAAATCTGATCTGGTGGA...ATTCATGCATAAGAGTATTTTACTCCTAGTAATGACTGCAGTATTGACTGGCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS CAA 72 bp | GCACCAAAGCTTGCGCGAAGCCAGAACGTTGAGCTCTaGAGGTCAGCTTGTGTCACGTGCGGGTACATGGCC | + |
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Preference number: 6 (lower is better) Translates to: APKLARSQNVEL*RSACVTCGYMA Trigger: GGCCATGTACCCGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092857.13 |
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| CDS TCA 72 bp | CACCAAAGCTTGCGCGAAGCCAGAACGTTGAGCTCTTaGGGTCAGCTTGTGTCACGTGCGGGTACATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: HQSLREARTLSS*GQLVSRAGTWP Trigger: TGGCCATGTACCCGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092857.13 |
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| CDS TCA 72 bp | GACCGTAGCACCAAAGCTTGCGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTGTGTCACGTGCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: DRSTKACAKPER*ALEVSLCHVRV Trigger: TACCCGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGCTACGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092857.13 |
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| CDS TCA 72 bp | GACCGTAGCACCAAAGCTTGCGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTGTGTCACGTGCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: DRSTKACAKPER*ALEVSLCHVPV Trigger: GACAGGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGCTACGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
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| CDS TCA 72 bp | GACCGTAGCACCAAAGCTTGCGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTGTGTCACGTGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: DRSTKACAKPER*ALEVSLCHVQS Trigger: GCTTTGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGCTACGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017831.16 |
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| CDS TCA 72 bp | GACCGTAGCACCAAAGCTTGCGCGAAGCCAGAACGTTaGGCTCTTGAGGTCAGCTTGTGTCACGTGCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: DRSTKACAKPER*ALEVSLCHVPV Trigger: AACAGGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGCTACGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
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| CDS CAA 90 bp | AAGACCGTAGCACCAAAGCTTGCGCGAAGCCAGAACGTTGAGCTCTaGAGGTCAGCTTGTGTCACGTGCGGGTACATGGCCATTGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: KTVAPKLARSQNVEL*RSACVTCGYMAIVV Trigger: GACAACAATGGCCATGTACCCGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGCTACGGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092857.13 |
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| CDS CAA 72 bp | GCACCAAAGCTTGCGCGAAGCCAGAACGTTGAGCTCTaGAGGTCAGCTTGTGTCACGTGCCTGTCATCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: APKLARSQNVEL*RSACVTCLSSR Trigger: TCTTGATGACAGGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
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| CDS TCA 72 bp | ATGGAATCTTCTACGGAGCTGACGGCGTGCACCTGGTaGGTAATACTGCCTTCGTCGTCTGCTAACAGCATG | + |
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Preference number: 6 (lower is better) Translates to: MESSTELTACTW*VILPSSSANSM Trigger: CATGCTGTTAGCAGACGACGAAGGCAGTATTACTCACCAGGTGCACGCCGTCAGCTCCGTAGAAGATTCCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
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| CDS TCA 72 bp | CACCAAAGCTTGCGCGAAGCCAGAACGTTGAGCTCTTaGGGTCAGCTTGTGTCACGTGCCTGTCATCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: HQSLREARTLSS*GQLVSRACHQE Trigger: TTCTTGATGACAGGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
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| CDS GCA 72 bp | CTATTCTATCAGTGCTGCCCATGTCTCGGGAGAGGCTaGCTCTGTAATGATCCTCTGGGTACATGGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: LFYQCCPCLGRG*LCNDPLGTWPL Trigger: CAATGGCCATGTACCCAGAGGATCATTACAGAGGCAGCCTCTCCCGAGACATGGGCAGCACTGATAGAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017831.16 ENSMUST00000077451.14 ENSMUST00000237515.2 |
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| CDS CAA 72 bp | GCACCAAAGCTTGCGCGAAGCCAGAACGTTGAGCTCTaGAGGTCAGCTTGTGTCACGTGCCTGTTAAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: APKLARSQNVEL*RSACVTCLLRT Trigger: AGTTCTTAACAGGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
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| CDS CAA 90 bp | AAGACCGTAGCACCAAAGCTTGCGCGAAGCCAGAACGTTGAGCTCTaGAGGTCAGCTTGTGTCACGTGCCTGTTAAGAACTGCAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: KTVAPKLARSQNVEL*RSACVTCLLRTAVK Trigger: CTTCACTGCAGTTCTTAACAGGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGCTACGGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 |
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| CDS GCA 72 bp | AGCGTCAGCCCACTGTCAGCCACACCGTCACTTAAGTaGTTTCTAACCACATTCTTGACATCTTCCAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: SVSPLSATPSLK*FLTTFLTSSSA Trigger: AGCGCTGGAAGATGTCAAGAATGTGGTTAGAAAGCACTTAAGTGACGGTGTGGCTGACAGTGGGCTGACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS CAA 72 bp | GCACCAAAGCTTGCGCGAAGCCAGAACGTTGAGCTCTaGAGGTCAGCTTGTGTCACGTGCAAAGCAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: APKLARSQNVEL*RSACVTCKAVF Trigger: AAAAACTGCTTTGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017831.16 |
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| CDS CAA 72 bp | GCCACACCGTCACTTAAGTGCTTTCTAACCACATTCTaGACATCTTCCAGCGCTTGCGGAGCTAAAGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: ATPSLKCFLTTF*TSSSACGAKGV Trigger: CACTCCTTTAGCTCCGCAAGCGCTGGAAGATGTCAAGAATGTGGTTAGAAAGCACTTAAGTGACGGTGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS TCA 72 bp | CACGTGCCTGTCATCAAGAAAAAGCTGACCGTGAGATaGCTCCATGAAGATGGAATCTTCTACGGAGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: HVPVIKKKLTVR*LHEDGIFYGAD Trigger: GTCAGCTCCGTAGAAGATTCCATCTTCATGGAGTCATCTCACGGTCAGCTTTTTCTTGATGACAGGCACGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237515.2 |
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| CDS CAA 90 bp | CCACTGTCAGCCACACCGTCACTTAAGTGCTTTCTAACCACATTCTaGACATCTTCCAGCGCTTGCGGAGCTAAAGGAGTGTTGAAACAA | + |
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Preference number: 6 (lower is better) Translates to: PLSATPSLKCFLTTF*TSSSACGAKGVLKQ Trigger: TTGTTTCAACACTCCTTTAGCTCCGCAAGCGCTGGAAGATGTCAAGAATGTGGTTAGAAAGCACTTAAGTGACGGTGTGGCTGACAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS CAA 90 bp | TCCACTGGGAGAGGAACCCCTGGTAGGTTATCCAGCCTCTTTCATTaGTGCAAACTGTGTTATTTACATCTGGTCCCCAAGGTATGTAAG | + |
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Preference number: 6 (lower is better) Translates to: STGRGTPGRLSSLFH*CKLCYLHLVPKVCK Trigger: CTTACATACCTTGGGGACCAGATGTAAATAACACAGTTTGCACAAATGAAAGAGGCTGGATAACCTACCAGGGGTTCCTCTCCCAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS GCA 72 bp | TCAGTAGGTGAGATGCTATGTTCCTGTTTGACTTCATaGAGGTCTGACTTTGCAGCTACAATCAAGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SVGEMLCSCLTS*RSDFAATIKQG Trigger: TCCCTGCTTGATTGTAGCTGCAAAGTCAGACCTGCATGAAGTCAAACAGGAACATAGCATCTCACCTACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS CAA 72 bp | TTGACATCTTCCAGCGCTTGCGGAGCTAAAGGAGTGTaGAAACAAATTCTCTGGAAGAAGTTGAGCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LTSSSACGAKGV*KQILWKKLSSA Trigger: TGCTGAGCTCAACTTCTTCCAGAGAATTTGTTTCAACACTCCTTTAGCTCCGCAAGCGCTGGAAGATGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS CAA 72 bp | AGAGGAACCCCTGGTAGGTTATCCAGCCTCTTTCATTaGTGCAAACTGTGTTATTTACATCTGGTCCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RGTPGRLSSLFH*CKLCYLHLVPK Trigger: CTTGGGGACCAGATGTAAATAACACAGTTTGCACAAATGAAAGAGGCTGGATAACCTACCAGGGGTTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS CAA 90 bp | TTGTGTTTCCTGCAGAAATCAGTAGGTGAGATGCTATGTTCCTGTTaGACTTCATGCAGGTCTGACTTTGCAGCTACAATCAAGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LCFLQKSVGEMLCSC*TSCRSDFAATIKQG Trigger: TCCCTGCTTGATTGTAGCTGCAAAGTCAGACCTGCATGAAGTCAAACAGGAACATAGCATCTCACCTACTGATTTCTGCAGGAAACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS TCA 72 bp | TGGAGGCATTTTGTGTTTCCTGCAGAAATCAGTAGGTaGGATGCTATGTTCCTGTTTGACTTCATGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: WRHFVFPAEISR*DAMFLFDFMQV Trigger: GACCTGCATGAAGTCAAACAGGAACATAGCATCTCACCTACTGATTTCTGCAGGAAACACAAAATGCCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 ENSMUST00000237515.2 |
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| CDS TCA 72 bp | TTTACAGATTGCAGCAAGTCTGAGTTGAGGAAGTTCTaGCAGATGCAAAATGTACACCTGTTGCAGGTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: FTDCSKSELRKF*QMQNVHLLQVH Trigger: GTGCACCTGCAACAGGTGTACATTTTGCATCTGTCAGAACTTCCTCAACTCAGACTTGCTGCAATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000134894.2 ENSMUST00000237515.2 |
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| CDS CAA 72 bp | CTGCAGAAATCAGTAGGTGAGATGCTATGTTCCTGTTaGACTTCATGCAGGTCTGACTTTGCAGCTACAATC | + |
|
Preference number: 6 (lower is better) Translates to: LQKSVGEMLCSC*TSCRSDFAATI Trigger: GATTGTAGCTGCAAAGTCAGACCTGCATGAAGTCAAACAGGAACATAGCATCTCACCTACTGATTTCTGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS CAA 72 bp | ATGGTCTCCATACTACTATATTCCACCAGATCAGATTaGTTCCCAACCAATATCAAAGGCAGCCTGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: MVSILLYSTRSD*FPTNIKGSLLS Trigger: AGACAGCAGGCTGCCTTTGATATTGGTTGGGAACAAATCTGATCTGGTGGAATATAGTAGTATGGAGACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS CAA 90 bp | ATTGGAAGGATGGTCTCCATACTACTATATTCCACCAGATCAGATTaGTTCCCAACCAATATCAAAGGCAGCCTGCTGTCTTTGTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: IGRMVSILLYSTRSD*FPTNIKGSLLSLSV Trigger: AACAGACAAAGACAGCAGGCTGCCTTTGATATTGGTTGGGAACAAATCTGATCTGGTGGAATATAGTAGTATGGAGACCATCCTTCCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS CCA 72 bp | CACACAGGTCTCTATCTCTGTATACTGGTTCATAATTaGAAGGATGGTCTCCATACTACTATATTCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: HTGLYLCILVHN*KDGLHTTIFHQ Trigger: CTGGTGGAATATAGTAGTATGGAGACCATCCTTCCAATTATGAACCAGTATACAGAGATAGAGACCTGTGTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 |
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| CDS CAA 90 bp | AAATGTTGCTTAAAAATCCTGGCACAGTATTCAAAGGATTTGGGATaGGTGACATCATATACCAGGCATACAACATCACAAATGGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: KCCLKILAQYSKDLG*VTSYTRHTTSQMVS Trigger: TGAGACCATTTGTGATGTTGTATGCCTGGTATATGATGTCACCAATCCCAAATCCTTTGAATACTGTGCCAGGATTTTTAAGCAACATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS CAA 72 bp | TTAAAAATCCTGGCACAGTATTCAAAGGATTTGGGATaGGTGACATCATATACCAGGCATACAACATCACAA | + |
|
Preference number: 6 (lower is better) Translates to: LKILAQYSKDLG*VTSYTRHTTSQ Trigger: TTGTGATGTTGTATGCCTGGTATATGATGTCACCAATCCCAAATCCTTTGAATACTGTGCCAGGATTTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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| CDS CAA 90 bp | TCCATAAAATGTTGCTTAAAAATCCTGGCACAGTATTCAAAGGATTaGGGATTGGTGACATCATATACCAGGCATACAACATCACAAATG | + |
|
Preference number: 6 (lower is better) Translates to: SIKCCLKILAQYSKD*GLVTSYTRHTTSQM Trigger: CATTTGTGATGTTGTATGCCTGGTATATGATGTCACCAATCCCAAATCCTTTGAATACTGTGCCAGGATTTTTAAGCAACATTTTATGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000017831.16 ENSMUST00000055056.16 ENSMUST00000077451.14 ENSMUST00000092857.13 ENSMUST00000134894.2 |
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