Pregenerated sensors for RHOD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041845Ensembl transcript IDs: ENSMUST00000048197.10, ENSMUST00000117462.2, ENSMUST00000235680.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTaGATGGATGTGTGGTTCTACCAGCTCAGCCTAGGGATTAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: QDSSVQGPGLIGAHL*MDVWFYQLSLGIRS Trigger: GGACCTAATCCCTAGGCTGAGCTGGTAGAACCACACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| 3UTR CCA 90 bp | GTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGATGTGTaGTTCTACCAGCTCAGCCTAGGGATTAGGTCCATCCCAGTCAAC | + |
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Preference number: 1 (lower is better) Translates to: VQGPGLIGAHLWMDV*FYQLSLGIRSIPVN Trigger: GTTGACTGGGATGGACCTAATCCCTAGGCTGAGCTGGTAGAACCACACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 |
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| 3UTR CCA 90 bp | GCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGGATTaGGCACAGGAGTCTATAATGGTTCCAGAGCTAAGGGTCTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: AKQTAQTPLRTQVQD*AQESIMVPELRVWE Trigger: TTCCCAGACCCTTAGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| 3UTR TCA 90 bp | TGCTGCTTCCTGGAAGACGGCTTCCACGTTGTCATGGAGCCGAGCTaGACACTCAAGATAGGCCACCGCTCCCACAGACCTTGCCATATC | + |
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Preference number: 1 (lower is better) Translates to: CCFLEDGFHVVMEPS*TLKIGHRSHRPCHI Trigger: GATATGGCAAGGTCTGTGGGAGCGGTGGCCTATCTTGAGTGTTCAGCTCGGCTCCATGACAACGTGGAAGCCGTCTTCCAGGAAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR GCA 90 bp | AATCCGCCGCCAAAAGTTATGTCTGCGACTGCTGAGAGCCACTTCTaGTGCTTCCTGGAAGACGGCTTCCACGTTGTCATGGAGCCGAGC | + |
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Preference number: 1 (lower is better) Translates to: NPPPKVMSATAESHF*CFLEDGFHVVMEPS Trigger: GCTCGGCTCCATGACAACGTGGAAGCCGTCTTCCAGGAAGCAGCAGAAGTGGCTCTCAGCAGTCGCAGACATAACTTTTGGCGGCGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR TCA 90 bp | AGGCAAGGTGGGTTCCAAGCCAGTCAGGTGGCCAAGCAACAATTCTaGGTAATCCGCCGCCAAAAGTTATGTCTGCGACTGCTGAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: RQGGFQASQVAKQQF*VIRRQKLCLRLLRA Trigger: GGCTCTCAGCAGTCGCAGACATAACTTTTGGCGGCGGATTACTCAGAATTGTTGCTTGGCCACCTGACTGGCTTGGAACCCACCTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR GCA 90 bp | GTCCATCCCAGTCAACAGAGTACAAGTTCTGCTTCTGGGTCTTTCTaGAGCGGAGTAAACCGGAAGGCAAGGTGGGTTCCAAGCCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: VHPSQQSTSSASGSF*SGVNRKARWVPSQS Trigger: TGACTGGCTTGGAACCCACCTTGCCTTCCGGTTTACTCCGCTGCAGAAAGACCCAGAAGCAGAACTTGTACTCTGTTGACTGGGATGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR CCA 90 bp | CAAAAGTTATGTCTGCGACTGCTGAGAGCCACTTCTGCTGCTTCCTaGAAGACGGCTTCCACGTTGTCATGGAGCCGAGCTGAACACTCA | + |
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Preference number: 1 (lower is better) Translates to: QKLCLRLLRATSAAS*KTASTLSWSRAEHS Trigger: TGAGTGTTCAGCTCGGCTCCATGACAACGTGGAAGCCGTCTTCCAGGAAGCAGCAGAAGTGGCTCTCAGCAGTCGCAGACATAACTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAAGGTGGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGCTGTGGATGGATGTGTaGTTCTACCAGCTCAGCCTA | + |
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Preference number: 2 (lower is better) Translates to: PQGGAKQTAQTPLRTQVQLWMDV*FYQLSL Trigger: TAGGCTGAGCTGGTAGAACCACACATCCATCCACAG...CTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACCTTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCACAAGGTGGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCCTGTGGATGGATGTGTaGTTCTACCAGCTCAGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: SHKVAPNRPHRPRSGRRSLWMDV*FYQLSL Trigger: TAGGCTGAGCTGGTAGAACCACACATCCATCCACAG...GGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACCTTGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| 3UTR CAA 90 bp | CCTCTTCCTCAATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATaGGAGCCCATCTGTGGATGGATGTGTGGTTCTACCAGCTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PLPQSRIPRSRGQAS*EPICGWMCGSTSSA Trigger: GGCTGAGCTGGTAGAACCACACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATTGAGGAAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| 3UTR CAA 90 bp | CGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGGATaGGGCACAGGAGTCTATAATGGTTCCAGAGCTAAGGGTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RQTDRTDPAQDAGPG*GTGVYNGSRAKGLG Trigger: TCCCAGACCCTTAGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGTGGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGGATTGAGCCCATCTGTGGATaGATGTGTGGTTCTACCAGC | + |
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Preference number: 2 (lower is better) Translates to: KVAPNRPHRPRSGRRSRIEPICG*MCGSTS Trigger: GCTGGTAGAACCACACATCCATCCACAGATGGGCTC...AATCCTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGTACAAGTTCTGCTTCTaGGTCTTTCTGCAGCGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SRIPRSRGQASLEPICGWYKFCF*VFLQRS Trigger: ACTCCGCTGCAGAAAGACCCAGAAGCAGAACTTGTA...CCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 |
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| 3UTR-3UTR TCA 90 bp | CCACGTTGTCATGGAGCCGAGCTGAACACTCAAGATAGGCCACCGCTCCCACAGGTTTGGGATGCGGGGTaGAACTCACATTTGGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: PRCHGAELNTQDRPPLPQVWDAG*NSHLVL Trigger: CAAGACCAAATGTGAGTTTCACCCCGCATCCCAAAC...CTGTGGGAGCGGTGGCCTATCTTGAGTGTTCAGCTCGGCTCCATGACAACGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGATGTGTGGTTCTACCACAGAGTACAAGTTCTaGTTCTGGGTCTTTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SRGQASLEPICGWMCGSTTEYKF*FWVFLQ Trigger: CTGCAGAAAGACCCAGAAGCAGAACTTGTACTCTGT...GGTAGAACCACACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 |
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| 3UTR-3UTR CCA 90 bp | CCGCCAAAAGTTATGTCTGCGACTGCTGAGAGCCACTTCTGCTGCTTCCTGGAACCAGGGCACCTTCAGTaGGCAACTAATCTGTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: PPKVMSATAESHFCCFLEPGHLQ*ATNLCV Trigger: AACACACAGATTAGTTGCCCACTGAAGGTGCCCTGG...TTCCAGGAAGCAGCAGAAGTGGCTCTCAGCAGTCGCAGACATAACTTTTGGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTAAGGGTCTGGGAACAGAGTACAAGTTCTaGTTCTGGGTCTTTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GPGLGTGVYNGSRAKGLGTEYKF*FWVFLQ Trigger: CTGCAGAAAGACCCAGAAGCAGAACTTGTACTCTGT...TCCCAGACCCTTAGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTCAGGGGTCTTATTTGTaGATATTACCTATCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: AQDAGPGLGTGVYNGSRAQGSYL*ILPICP Trigger: AGGACAGATAGGTAATATGCACAAATAAGACCCCTG...AGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAGTCTTGAGGACAATAGTGGGAAGTGGGGTTTTTCCAGGGCACCTTCAGTGTACAAGTTCTGCTTCTaGGTCTTTCTGCAGCGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SSLEDNSGKWGFSRAPSVYKFCF*VFLQRS Trigger: ACTCCGCTGCAGAAAGACCCAGAAGCAGAACTTGTA...CACTGAAGGTGCCCTGGAAAAACCCCACTTCCCACTATTGTCCTCAAGACTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR CCA 72 bp | TCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTaGATGGATGTGTGGTTCTACCAGCTCAGCCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: SVQGPGLIGAHL*MDVWFYQLSLG Trigger: CCCTAGGCTGAGCTGGTAGAACCACACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| 3UTR TCA 72 bp | CTGGAAGACGGCTTCCACGTTGTCATGGAGCCGAGCTaGACACTCAAGATAGGCCACCGCTCCCACAGACCT | + |
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Preference number: 3 (lower is better) Translates to: LEDGFHVVMEPS*TLKIGHRSHRP Trigger: AGGTCTGTGGGAGCGGTGGCCTATCTTGAGTGTTCAGCTCGGCTCCATGACAACGTGGAAGCCGTCTTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR CCA 72 bp | ACCGCACAGACCCCGCTCAGGACGCAGGTCCAGGATTaGGCACAGGAGTCTATAATGGTTCCAGAGCTAAGG | + |
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Preference number: 3 (lower is better) Translates to: TAQTPLRTQVQD*AQESIMVPELR Trigger: CCTTAGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| 3UTR CCA 72 bp | AATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTaGAGCCCATCTGTGGATGGATGTGTGGTTCTACCA | + |
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Preference number: 3 (lower is better) Translates to: NPGFLGPGARPH*SPSVDGCVVLP Trigger: TGGTAGAACCACACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| 3UTR CCA 72 bp | GGGTCTTTCTGCAGCGGAGTAAACCGGAAGGCAAGGTaGGTTCCAAGCCAGTCAGGTGGCCAAGCAACAATT | + |
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Preference number: 3 (lower is better) Translates to: GSFCSGVNRKAR*VPSQSGGQATI Trigger: AATTGTTGCTTGGCCACCTGACTGGCTTGGAACCCACCTTGCCTTCCGGTTTACTCCGCTGCAGAAAGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR TCA 72 bp | GGGTTCCAAGCCAGTCAGGTGGCCAAGCAACAATTCTaGGTAATCCGCCGCCAAAAGTTATGTCTGCGACTG | + |
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Preference number: 3 (lower is better) Translates to: GFQASQVAKQQF*VIRRQKLCLRL Trigger: CAGTCGCAGACATAACTTTTGGCGGCGGATTACTCAGAATTGTTGCTTGGCCACCTGACTGGCTTGGAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR GCA 72 bp | AAAGTTATGTCTGCGACTGCTGAGAGCCACTTCTGCTaGTTCCTGGAAGACGGCTTCCACGTTGTCATGGAG | + |
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Preference number: 3 (lower is better) Translates to: KVMSATAESHFC*FLEDGFHVVME Trigger: CTCCATGACAACGTGGAAGCCGTCTTCCAGGAAGCAGCAGAAGTGGCTCTCAGCAGTCGCAGACATAACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR CCA 72 bp | GGTCCATCCCAGTCAACAGAGTACAAGTTCTGCTTCTaGGTCTTTCTGCAGCGGAGTAAACCGGAAGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: GPSQSTEYKFCF*VFLQRSKPEGK Trigger: CTTGCCTTCCGGTTTACTCCGCTGCAGAAAGACCCAGAAGCAGAACTTGTACTCTGTTGACTGGGATGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 |
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| 3UTR GCA 72 bp | AGTCAACAGAGTACAAGTTCTGCTTCTGGGTCTTTCTaGAGCGGAGTAAACCGGAAGGCAAGGTGGGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: SQQSTSSASGSF*SGVNRKARWVP Trigger: TGGAACCCACCTTGCCTTCCGGTTTACTCCGCTGCAGAAAGACCCAGAAGCAGAACTTGTACTCTGTTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 |
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| 3UTR GCA 72 bp | GGATTAGGTCCATCCCAGTCAACAGAGTACAAGTTCTaGTTCTGGGTCTTTCTGCAGCGGAGTAAACCGGAA | + |
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Preference number: 3 (lower is better) Translates to: GLGPSQSTEYKF*FWVFLQRSKPE Trigger: TTCCGGTTTACTCCGCTGCAGAAAGACCCAGAAGCAGAACTTGTACTCTGTTGACTGGGATGGACCTAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 |
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| 3UTR GCA 72 bp | TTTGGGATGCGGGGTGAAACTCACATTTGGTCTTGCTaGAGCCCTTTTGGCAATGTCAGTAGTCTTGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: FGMRGETHIWSC*SPFGNVSSLED Trigger: GTCCTCAAGACTACTGACATTGCCAAAAGGGCTGCAGCAAGACCAAATGTGAGTTTCACCCCGCATCCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| 3UTR CCA 72 bp | ATAGTGGGAAGTGGGGTTTTTCCAGGGCACCTTCAGTaGGCAACTAATCTGTGTGTTACAGAGAAAGGTCTA | + |
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Preference number: 3 (lower is better) Translates to: IVGSGVFPGHLQ*ATNLCVTEKGL Trigger: TAGACCTTTCTCTGTAACACACAGATTAGTTGCCCACTGAAGGTGCCCTGGAAAAACCCCACTTCCCACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS-3UTR GCA 90 bp | GGTGGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGGATTGGACCGAGTGCCCGCTCTaGGGCGCCTCTTCTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: GGAKQTAQTPLRTQVQDWTECPL*GASSPA Trigger: TGCGGGAGAAGAGGCGCCGCAGAGCGGGCACTCGGT...CCAATCCTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR TCA 90 bp | GGAACCCTCTTCCTCAATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGCCACCAGGACCACCTTaGCCGAGTGCCCGCTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: GTLFLNPGFLGPGARPHWPPGPP*PSARSA Trigger: CGCAGAGCGGGCACTCGGTCAAGGTGGTCCTGGTGG...CCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATTGAGGAAGAGGGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR GCA 90 bp | CAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGATACCGAGTGCCCGCTCTaGGGCGCCTCTTCTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: QDSSVQGPGLIGAHLWMDTECPL*GASSPA Trigger: TGCGGGAGAAGAGGCGCCGCAGAGCGGGCACTCGGT...ATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR TCA 90 bp | ACAGACCCCGCTCAGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTCCACCAGGACCACCTTaGCCGAGTGCCCGCTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: TDPAQDAGPGLGTGVYNGPPGPP*PSARSA Trigger: CGCAGAGCGGGCACTCGGTCAAGGTGGTCCTGGTGG...ACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGCGGGGTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR TCA 90 bp | AGCCACAAGGTGGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCGTCATGGAGCCGAGCTaGACACTCAAGATAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SHKVAPNRPHRPRSGRRSVMEPS*TLKIGH Trigger: GTGGCCTATCTTGAGTGTTCAGCTCGGCTCCATGAC...GGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACCTTGTGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000235680.2 |
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| CDS-3UTR GCA 90 bp | CCACAAGGTGGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGTCTGCTTCCAAGTGCTaGCCCTTCCTGACTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: PQGGAKQTAQTPLRTQVQSASKC*PFLTAD Trigger: GTCAGCAGTCAGGAAGGGGCAGCACTTGGAAGCAGA...CTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACCTTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS-3UTR CCA 90 bp | GGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGGATTGGGCAAACCGGAAGGCAAGGTaGGTTCCAAGCCAGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GAKQTAQTPLRTQVQDWANRKAR*VPSQSG Trigger: ACCTGACTGGCTTGGAACCCACCTTGCCTTCCGGTT...TGCCCAATCCTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235680.2 |
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| CDS-3UTR TCA 90 bp | CGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGGATTGGGCACATGCAGCCCACAACAATaGTGGGCACTCCCTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RQTDRTDPAQDAGPGLGTCSPQQ*WALPCR Trigger: TCTGCAAGGGAGTGCCCATCATTGTTGTGGGCTGCA...TGTGCCCAATCCTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR TCA 90 bp | TCCTCAATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGAGTGCTGCCCCTTCCTaGCTGCTGACATCCGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: SSIQDSSVQGPGLIGAHLSAAPS*LLTSAK Trigger: CTTGGCGGATGTCAGCAGTCAGGAAGGGGCAGCACT...CAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATTGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS-3UTR CCA 90 bp | GCCACAAGGTGGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCACTGGGTACCACCGGTTaGAGACGTTGTCAAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ATRWRQTDRTDPAQDAGPLGTTG*RRCQSC Trigger: ACAGCTTTGACAACGTCTCCAACCGGTGGTACCCAG...TGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACCTTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CCA 90 bp | TCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGGCCATATCGTGGCCCTaGCACAGTGGGGAAGTATCC | + |
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Preference number: 4 (lower is better) Translates to: SRIPRSRGQASLEPICGWAISWP*HSGEVS Trigger: GGATACTTCCCCACTGTGCCAGGGCCACGATATGGC...CCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235680.2 |
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| CDS-3UTR TCA 90 bp | CGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGGATTGGGCACATATGTCTGCGACTGCTaGGAGCCACTTCTGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RQTDRTDPAQDAGPGLGTYVCDC*EPLLLL Trigger: AAGCAGCAGAAGTGGCTCTCAGCAGTCGCAGACATA...TGTGCCCAATCCTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000235680.2 |
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| CDS-3UTR GCA 90 bp | AGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTAAGGACCGAGTGCCCGCTCTaGGGCGCCTCTTCTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTQVQDWAQESIMVPELRTECPL*GASSPA Trigger: TGCGGGAGAAGAGGCGCCGCAGAGCGGGCACTCGGT...CCTTAGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR GCA 90 bp | TCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGGAGAGCCACTTCTGCTaGTTCCTGGAAGACGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRIPRSRGQASLEPICGWESHFC*FLEDGF Trigger: GAAGCCGTCTTCCAGGAAGCAGCAGAAGTGGCTCTC...CCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000235680.2 |
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| CDS-3UTR GCA 90 bp | CCACAAGGTGGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGGAAGTATCCAGAGGTTaGCTAGCTTCCTACCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: PQGGAKQTAQTPLRTQVQEVSRG*LASYLP Trigger: GGGTAGGTAGGAAGCTAGGCAACCTCTGGATACTTC...CTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACCTTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117462.2 ENSMUST00000235680.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTCAATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTCGCTCCCACAGACCTTaGCATATCGTGGCCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLNPGFLGPGARPHWSPSRSHRP*HIVALA Trigger: TGCCAGGGCCACGATATGGCAAGGTCTGTGGGAGCG...AGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATTGAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235680.2 |
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| CDS-3UTR CCA 90 bp | CGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGGATTGGGCACAGAAATGTGTCACCTCTaGGTACCACCGGTTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RQTDRTDPAQDAGPGLGTEMCHL*VPPVGD Trigger: GTCTCCAACCGGTGGTACCCAGAGGTGACACATTTC...TGTGCCCAATCCTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCAATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGCAGCCCACAACAATaGTGGGCACTCCCTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPQSRIPRSRGQASLEPICSPQQ*WALPCR Trigger: TCTGCAAGGGAGTGCCCATCATTGTTGTGGGCTGCA...GATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATTGAGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR TCA 90 bp | AAGGTGGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGGATTTATGTCTGCGACTGCTaGGAGCCACTTCTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVAPNRPHRPRSGRRSRIYVCDC*EPLLLL Trigger: AAGCAGCAGAAGTGGCTCTCAGCAGTCGCAGACATA...AATCCTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000235680.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCAATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGCTGGGAAGGCCCCTTTaGCGAAGACCATCATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSIQDSSVQGPGLIGAHLLGRPL*RRPSSV Trigger: CACTGATGATGGTCTTCGCCAAAGGGGCCTTCCCAG...CAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATTGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CCA 90 bp | TCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGATGTGTGGTTCCTGGGAAGGCCCCTTTaGCGAAGACCATCATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVQGPGLIGAHLWMDVWFLGRPL*RRPSSV Trigger: CACTGATGATGGTCTTCGCCAAAGGGGCCTTCCCAG...GAACCACACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
||
| CDS-3UTR TCA 90 bp | AGTAGTCTTGAGGACAATAGTGGGAAGTGGGGTTTTTCCAGGGCACCTTCAGTGCCACCAGGACCACCTTaGCCGAGTGCCCGCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSLEDNSGKWGFSRAPSVPPGPP*PSARSA Trigger: CGCAGAGCGGGCACTCGGTCAAGGTGGTCCTGGTGG...CACTGAAGGTGCCCTGGAAAAACCCCACTTCCCACTATTGTCCTCAAGACTACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGATGTGTGGTTCTACCGTCATGGAGCCGAGCTaGACACTCAAGATAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRGQASLEPICGWMCGSTVMEPS*TLKIGH Trigger: GTGGCCTATCTTGAGTGTTCAGCTCGGCTCCATGAC...GGTAGAACCACACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000235680.2 |
||
| CDS-3UTR GCA 90 bp | GCTCAGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTCGCTCCCACAGACCTTaGCATATCGTGGCCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQDAGPGLGTGVYNGSRARSHRP*HIVAPV Trigger: CACAGGGGCCACGATATGGCAAGGTCTGTGGGAGCG...AGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048197.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGATGTGTGGTTCTAGAGAGCCACTTCTGCTaGTTCCTGGAAGACGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPGARPHWSPSVDGCVVLESHFC*FLEDGF Trigger: GAAGCCGTCTTCCAGGAAGCAGCAGAAGTGGCTCTC...TAGAACCACACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000235680.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCAATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGCTGGGTACCACCGGTTaGAGACGTTGTCAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSIQDSSVQGPGLIGAHLLGTTG*RRCQSC Trigger: ACAGCTTTGACAACGTCTCCAACCGGTGGTACCCAG...CAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATTGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
||
| 3UTR CAA 72 bp | CAATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATaGGAGCCCATCTGTGGATGGATGTGTGGTTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: QSRIPRSRGQAS*EPICGWMCGST Trigger: GGTAGAACCACACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR TCA 90 bp | AGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTAAGGGAAGACCATCATCAGTaGCGTCTTCCCGCAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTQVQDWAQESIMVPELREDHHQ*RLPAAP Trigger: GGGGGCTGCGGGAAGACGTCACTGATGATGGTCTTC...CCTTAGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CCA 90 bp | GCCACAAGGTGGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGTTGTCAAAGCTGTTTaGATTGGTCACATCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ATRWRQTDRTDPAQDAGPVVKAV*IGHIEA Trigger: TGCTTCGATGTGACCAATCCAAACAGCTTTGACAAC...TGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACCTTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CCA 90 bp | ACCCCGCTCAGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAAATGTGTCACCTCTaGGTACCACCGGTTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPLRTQVQDWAQESIMVPEMCHL*VPPVGD Trigger: GTCTCCAACCGGTGGTACCCAGAGGTGACACATTTC...TGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGCGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CCA 90 bp | GTCTTGAGGACAATAGTGGGAAGTGGGGTTTTTCCAGGGCACCTTCAGTGGGCACGTGTGCGACACACCTaGCACAGTGGGGAAGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: VLRTIVGSGVFPGHLQWARVRHT*HSGEVS Trigger: GGATACTTCCCCACTGTGCCAGGTGTGTCGCACACG...TGCCCACTGAAGGTGCCCTGGAAAAACCCCACTTCCCACTATTGTCCTCAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS-3UTR CCA 90 bp | GATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGATGTGTACAAGTTCTGCTTCTaGGTCTTTCTGCAGCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DSSVQGPGLIGAHLWMDVYKFCF*VFLQRS Trigger: ACTCCGCTGCAGAAAGACCCAGAAGCAGAACTTGTA...CACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235680.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGGAAGACGGCTTCCACGTTGTCATGGAGCCGAGCTGAACACTCAAGATGGTTCTGCTTCCAAGTaGTGCCCCTTCCTGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPGRRLPRCHGAELNTQDGSASK*CPFLTA Trigger: AGCAGTCAGGAAGGGGCAGCACTTGGAAGCAGAACC...ATCTTGAGTGTTCAGCTCGGCTCCATGACAACGTGGAAGCCGTCTTCCAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS-3UTR GCA 90 bp | CAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGATACAGAGTACAAGTTCTaGTTCTGGGTCTTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDSSVQGPGLIGAHLWMDTEYKF*FWVFLQ Trigger: CTGCAGAAAGACCCAGAAGCAGAACTTGTACTCTGT...ATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235680.2 |
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| CDS-3UTR CCA 90 bp | CAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGATCAAAGCTGTTTGGATTaGTCACATCGAAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QDSSVQGPGLIGAHLWMDQSCLD*SHRSRG Trigger: TCCTCTGCTTCGATGTGACCAATCCAAACAGCTTTG...ATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR GCA 90 bp | CCCGCTCAGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGATCCCAGATTTGGAGGTaGACAGGTTTACCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PAQDAGPGLGTGVYNGSRSQIWR*TGLPFI Trigger: GATGAAGGGTAAACCTGTGCACCTCCAAATCTGGGA...TCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR GCA 90 bp | GCTCAGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTGAAGTATCCAGAGGTTaGCTAGCTTCCTACCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: AQDAGPGLGTGVYNGSRAEVSRG*LASYLP Trigger: GGGTAGGTAGGAAGCTAGGCAACCTCTGGATACTTC...AGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CCA 90 bp | AGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTAAGGGCTGTGTCCCAGATTTaGAGGTGCACAGGTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: RTQVQDWAQESIMVPELRAVSQI*RCTGLP Trigger: GGGTAAACCTGTGCACCTCCAAATCTGGGACACAGC...CCTTAGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR GCA 90 bp | GCTCAGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTTCCCAGATTTGGAGGTaGACAGGTTTACCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: AQDAGPGLGTGVYNGSRASQIWR*TGLPFI Trigger: GATGAAGGGTAAACCTGTGCACCTCCAAATCTGGGA...AGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CCA 90 bp | GCAATGTCAGTAGTCTTGAGGACAATAGTGGGAAGTGGGGTTTTTCCAGGGCACCTGGGAAGGCCCCTTTaGCGAAGACCATCATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AMSVVLRTIVGSGVFPGHLGRPL*RRPSSV Trigger: CACTGATGATGGTCTTCGCCAAAGGGGCCTTCCCAG...GTGCCCTGGAAAAACCCCACTTCCCACTATTGTCCTCAAGACTACTGACATTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS-3UTR CCA 90 bp | AGTAGTCTTGAGGACAATAGTGGGAAGTGGGGTTTTTCCAGGGCACCTTCAGTGGCTGTGTCCCAGATTTaGAGGTGCACAGGTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLEDNSGKWGFSRAPSVAVSQI*RCTGLP Trigger: GGGTAAACCTGTGCACCTCCAAATCTGGGACACAGC...CACTGAAGGTGCCCTGGAAAAACCCCACTTCCCACTATTGTCCTCAAGACTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS-3UTR CCA 90 bp | GCTCAGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTCAAAGCTGTTTGGATTaGTCACATCGAAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQDAGPGLGTGVYNGSRAQSCLD*SHRSRG Trigger: TCCTCTGCTTCGATGTGACCAATCCAAACAGCTTTG...AGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTAAGGGTCTGGGACAAAGCTGTTTGGATTaGTCACATCGAAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPGLGTGVYNGSRAKGLGQSCLD*SHRSRG Trigger: TCCTCTGCTTCGATGTGACCAATCCAAACAGCTTTG...TCCCAGACCCTTAGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CCA 90 bp | GCTCAGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTGTTGTCAAAGCTGTTTaGATTGGTCACATCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQDAGPGLGTGVYNGSRAVVKAV*IGHIEA Trigger: TGCTTCGATGTGACCAATCCAAACAGCTTTGACAAC...AGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CCA 90 bp | TTGGCAATGTCAGTAGTCTTGAGGACAATAGTGGGAAGTGGGGTTTTTCCAGGGCTGGGTACCACCGGTTaGAGACGTTGTCAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAMSVVLRTIVGSGVFPGLGTTG*RRCQSC Trigger: ACAGCTTTGACAACGTCTCCAACCGGTGGTACCCAG...CCCTGGAAAAACCCCACTTCCCACTATTGTCCTCAAGACTACTGACATTGCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS-3UTR CCA 90 bp | TTGGCAATGTCAGTAGTCTTGAGGACAATAGTGGGAAGTGGGGTTTTTCCAGGGGAAATGTGTCACCTCTaGGTACCACCGGTTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAMSVVLRTIVGSGVFPGEMCHL*VPPVGD Trigger: GTCTCCAACCGGTGGTACCCAGAGGTGACACATTTC...CCCTGGAAAAACCCCACTTCCCACTATTGTCCTCAAGACTACTGACATTGCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS-3UTR CCA 90 bp | CTTCCTGGAAGACGGCTTCCACGTTGTCATGGAGCCGAGCTGAACACTCAAGATGTTGTCAAAGCTGTTTaGATTGGTCACATCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGRRLPRCHGAELNTQDVVKAV*IGHIEA Trigger: TGCTTCGATGTGACCAATCCAAACAGCTTTGACAAC...ATCTTGAGTGTTCAGCTCGGCTCCATGACAACGTGGAAGCCGTCTTCCAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGTCAGGACACTAATAGCAAGTGCTGCCATTTTAGTTGTTACACTTAGCTGCAGCCCACAACAATaGTGGGCACTCCCTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRVRTLIASAAILVVTLSCSPQQ*WALPCR Trigger: TCTGCAAGGGAGTGCCCATCATTGTTGTGGGCTGCA...GCTAAGTGTAACAACTAAAATGGCAGCACTTGCTATTAGTGTCCTGACTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048197.10 |
||
| CDS-3UTR TCA 90 bp | GTTACAGAGAAAGGTCTAAAATCAAATAACATGGACCTCAGGGGTCTTATTTGTGAAGACCATCATCAGTaGCGTCTTCCCGCAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTEKGLKSNNMDLRGLICEDHHQ*RLPAAP Trigger: GGGGGCTGCGGGAAGACGTCACTGATGATGGTCTTC...ACAAATAAGACCCCTGAGGTCCATGTTATTTGATTTTAGACCTTTCTCTGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
||
| CDS-3UTR CAA 90 bp | AGCCACAAGGTGGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCGCGGTCATAGTCATCTaGCCCGGCTGTGTCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SHKVAPNRPHRPRSGRRSAVIVI*PGCVPD Trigger: ATCTGGGACACAGCCGGGCAAGATGACTATGACCGC...GGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACCTTGTGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
||
| CDS-3UTR CAA 90 bp | GGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCAGGATTGGGCATCTGGGAAGGCCCCTTaGGCGAAGACCATCATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GAKQTAQTPLRTQVQDWASGKAP*AKTIIS Trigger: ACTGATGATGGTCTTCGCCAAAGGGGCCTTCCCAGA...TGCCCAATCCTGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
||
| CDS GCA 90 bp | CCCCGTGTGCGACACACCTGGCACAGTGGGGAAGTATCCAGAGGTTaGCTAGCTTCCTACCTACCCTGTGGTAGGTCACGGGCTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRVRHTWHSGEVSRG*LASYLPCGRSRAPV Trigger: GACTGGAGCCCGTGACCTACCACAGGGTAGGTAGGAAGCTAGGCAACCTCTGGATACTTCCCCACTGTGCCAGGTGTGTCGCACACGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
||
| CDS GCA 90 bp | CTTGCCATATCGTGGCCCTGGCACAGTGGGGAAGTATCCAGAGGTTaGCTAGCTTCCTACCTACCCTGTGGTAGGTCACGGGCTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LAISWPWHSGEVSRG*LASYLPCGRSRAPV Trigger: GACTGGAGCCCGTGACCTACCACAGGGTAGGTAGGAAGCTAGGCAACCTCTGGATACTTCCCCACTGTGCCAGGGCCACGATATGGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235680.2 |
||
| CDS-3UTR CAA 90 bp | TCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGATGTGTGGTTCTCTGGGAAGGCCCCTTaGGCGAAGACCATCATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVQGPGLIGAHLWMDVWFSGKAP*AKTIIS Trigger: ACTGATGATGGTCTTCGCCAAAGGGGCCTTCCCAGA...GAACCACACATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTCAATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGCGGTCATAGTCATCTaGCCCGGCTGTGTCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLNPGFLGPGARPHWSPSAVIVI*PGCVPD Trigger: ATCTGGGACACAGCCGGGCAAGATGACTATGACCGC...AGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATTGAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
||
| CDS-3UTR CAA 90 bp | GCCACAAGGTGGCGCCAAACAGACCGCACAGACCCCGCTCAGGACGCAGGTCCATTACGCAGGTCTATCTaGCAGCCCACAACAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: ATRWRQTDRTDPAQDAGPLRRSI*QPTTMM Trigger: CATCATTGTTGTGGGCTGCAAGATAGACCTGCGTAA...TGGACCTGCGTCCTGAGCGGGGTCTGTGCGGTCTGTTTGGCGCCACCTTGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CAA 90 bp | CAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATGGATAAGACGGCTTCCACGTaGTCATGGAGCCGAGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: QDSSVQGPGLIGAHLWMDKTAST*SWSRAE Trigger: TTCAGCTCGGCTCCATGACAACGTGGAAGCCGTCTT...ATCCATCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000235680.2 |
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| CDS CCA 90 bp | TTCCTGACTGCTGACATCCGCCAAGACCCCCGTGTGCGACACACCTaGCACAGTGGGGAAGTATCCAGAGGTTGCCTAGCTTCCTACCTA | + |
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Preference number: 5 (lower is better) Translates to: FLTADIRQDPRVRHT*HSGEVSRGCLASYL Trigger: TAGGTAGGAAGCTAGGCAACCTCTGGATACTTCCCCACTGTGCCAGGTGTGTCGCACACGGGGGTCTTGGCGGATGTCAGCAGTCAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS-3UTR CAA 90 bp | GCTCAGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTTCTGGGAAGGCCCCTTaGGCGAAGACCATCATCAGT | + |
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Preference number: 5 (lower is better) Translates to: AQDAGPGLGTGVYNGSRASGKAP*AKTIIS Trigger: ACTGATGATGGTCTTCGCCAAAGGGGCCTTCCCAGA...AGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CAA 90 bp | GGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTAAGGGTCTGGGAGCGGTCATAGTCATCTaGCCCGGCTGTGTCCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: GPGLGTGVYNGSRAKGLGAVIVI*PGCVPD Trigger: ATCTGGGACACAGCCGGGCAAGATGACTATGACCGC...TCCCAGACCCTTAGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CAA 90 bp | TCCTCAATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGCGTTGTCAAAGCTGTTaGGATTGGTCACATCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: SSIQDSSVQGPGLIGAHLRCQSC*DWSHRS Trigger: GCTTCGATGTGACCAATCCAAACAGCTTTGACAACG...CAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CAA 90 bp | CTTCCTCAATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCCGTTGTCAAAGCTGTTaGGATTGGTCACATCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: LPQSRIPRSRGQASLEPIRCQSC*DWSHRS Trigger: GCTTCGATGTGACCAATCCAAACAGCTTTGACAACG...GATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATTGAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CAA 90 bp | CAATCCAGGATTCCTCGGTCCAGGGGCCAGGCCTCATTGGAGCCCATCTGTGGATTACGCAGGTCTATCTaGCAGCCCACAACAATGATG | + |
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Preference number: 5 (lower is better) Translates to: QSRIPRSRGQASLEPICGLRRSI*QPTTMM Trigger: CATCATTGTTGTGGGCTGCAAGATAGACCTGCGTAA...TCCACAGATGGGCTCCAATGAGGCCTGGCCCCTGGACCGAGGAATCCTGGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CAA 90 bp | GGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTAAGGGTCTGGGAGGCTGTGTCCCAGATTaGGAGGTGCACAGGTTTACC | + |
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Preference number: 5 (lower is better) Translates to: GPGLGTGVYNGSRAKGLGGCVPD*EVHRFT Trigger: GGTAAACCTGTGCACCTCCAAATCTGGGACACAGCC...TCCCAGACCCTTAGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CAA 90 bp | CCGCCAAAAGTTATGTCTGCGACTGCTGAGAGCCACTTCTGCTGCTTCCTGGAAGGCTGTGTCCCAGATTaGGAGGTGCACAGGTTTACC | + |
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Preference number: 5 (lower is better) Translates to: PPKVMSATAESHFCCFLEGCVPD*EVHRFT Trigger: GGTAAACCTGTGCACCTCCAAATCTGGGACACAGCC...TTCCAGGAAGCAGCAGAAGTGGCTCTCAGCAGTCGCAGACATAACTTTTGGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS-3UTR CAA 90 bp | GGTCCAGGATTGGGCACAGGAGTCTATAATGGTTCCAGAGCTAAGGGTCTGGGAAAGACGGCTTCCACGTaGTCATGGAGCCGAGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: GPGLGTGVYNGSRAKGLGKTAST*SWSRAE Trigger: TTCAGCTCGGCTCCATGACAACGTGGAAGCCGTCTT...TCCCAGACCCTTAGCTCTGGAACCATTATAGACTCCTGTGCCCAATCCTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048197.10 ENSMUST00000235680.2 |
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| CDS-3UTR CAA 90 bp | ACAGACCCCGCTCAGGACGCAGGTCCAGGATTGGGCACAGGAGTCTATAATGGTCGTTGTCAAAGCTGTTaGGATTGGTCACATCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: TDPAQDAGPGLGTGVYNGRCQSC*DWSHRS Trigger: GCTTCGATGTGACCAATCCAAACAGCTTTGACAACG...ACCATTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGCGGGGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CCA 90 bp | TGTCACCTCTGGGTACCACCGGTTGGAGACGTTGTCAAAGCTGTTTaGATTGGTCACATCGAAGCAGAGGAGCAAGACATTGGCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: CHLWVPPVGDVVKAV*IGHIEAEEQDIGIR Trigger: CCTGATGCCAATGTCTTGCTCCTCTGCTTCGATGTGACCAATCCAAACAGCTTTGACAACGTCTCCAACCGGTGGTACCCAGAGGTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CCA 90 bp | TGTCCCAGATTTGGAGGTGCACAGGTTTACCCTTCATCTGCAGAGTaGCATTATAGCGCTCAAACACTGTGGGACTGTAGCTCTCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: CPRFGGAQVYPSSAE*HYSAQTLWDCSSLG Trigger: TCCCAGAGAGCTACAGTCCCACAGTGTTTGAGCGCTATAATGCCACTCTGCAGATGAAGGGTAAACCTGTGCACCTCCAAATCTGGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS-3UTR CAA 90 bp | TGGGAAGTGGGGTTTTTCCAGGGCACCTTCAGTGGGCAACTAATCTGTGTGTTATTACGCAGGTCTATCTaGCAGCCCACAACAATGATG | + |
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Preference number: 5 (lower is better) Translates to: WEVGFFQGTFSGQLICVLLRRSI*QPTTMM Trigger: CATCATTGTTGTGGGCTGCAAGATAGACCTGCGTAA...TAACACACAGATTAGTTGCCCACTGAAGGTGCCCTGGAAAAACCCCACTTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS TCA 72 bp | TCTTCCCGCAGCCCCCGTCGCCCACCAGGACCACCTTaGCCGAGTGCCCGCTCTGCGGCGCCTCTTCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: SSRSPRRPPGPP*PSARSAAPLLP Trigger: CGGGAGAAGAGGCGCCGCAGAGCGGGCACTCGGTCAAGGTGGTCCTGGTGGGCGACGGGGGCTGCGGGAAGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CAA 72 bp | GTCTTCCCGCAGCCCCCGTCGCCCACCAGGACCACCTaGACCGAGTGCCCGCTCTGCGGCGCCTCTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VFPQPPSPTRTT*TECPLCGASSP Trigger: GGGAGAAGAGGCGCCGCAGAGCGGGCACTCGGTCAAGGTGGTCCTGGTGGGCGACGGGGGCTGCGGGAAGAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS TCA 72 bp | GCATTCTGGGTTCTGCTTCCAAGTGCTGCCCCTTCCTaGCTGCTGACATCCGCCAAGACCCCCGTGTGCGAC | + |
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Preference number: 6 (lower is better) Translates to: AFWVLLPSAAPS*LLTSAKTPVCD Trigger: GTCGCACACGGGGGTCTTGGCGGATGTCAGCAGTCAGGAAGGGGCAGCACTTGGAAGCAGAACCCAGAATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS CCA 72 bp | GCTGACATCCGCCAAGACCCCCGTGTGCGACACACCTaGCACAGTGGGGAAGTATCCAGAGGTTGCCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: ADIRQDPRVRHT*HSGEVSRGCLA Trigger: AGCTAGGCAACCTCTGGATACTTCCCCACTGTGCCAGGTGTGTCGCACACGGGGGTCTTGGCGGATGTCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS CCA 72 bp | GCCACCGCTCCCACAGACCTTGCCATATCGTGGCCCTaGCACAGTGGGGAAGTATCCAGAGGTTGCCTAGCT | + |
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Preference number: 6 (lower is better) Translates to: ATAPTDLAISWP*HSGEVSRGCLA Trigger: AGCTAGGCAACCTCTGGATACTTCCCCACTGTGCCAGGGCCACGATATGGCAAGGTCTGTGGGAGCGGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235680.2 |
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| CDS GCA 72 bp | GCCTCCTTGAGCATTCTGGGTTCTGCTTCCAAGTGCTaGCCCTTCCTGACTGCTGACATCCGCCAAGACCCC | + |
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Preference number: 6 (lower is better) Translates to: ASLSILGSASKC*PFLTADIRQDP Trigger: GGGGTCTTGGCGGATGTCAGCAGTCAGGAAGGGGCAGCACTTGGAAGCAGAACCCAGAATGCTCAAGGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS GCA 72 bp | TCGTGGCCCTGGCACAGTGGGGAAGTATCCAGAGGTTaGCTAGCTTCCTACCTACCCTGTGGTAGGTCACGG | + |
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Preference number: 6 (lower is better) Translates to: SWPWHSGEVSRG*LASYLPCGRSR Trigger: CCGTGACCTACCACAGGGTAGGTAGGAAGCTAGGCAACCTCTGGATACTTCCCCACTGTGCCAGGGCCACGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235680.2 |
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| CDS CAA 72 bp | CTGAACACTCAAGATAGGCCACCGCTCCCACAGACCTaGCCATATCGTGGCCCCTGTGGTAGGTCACGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LNTQDRPPLPQT*PYRGPCGRSRA Trigger: AGCCCGTGACCTACCACAGGGGCCACGATATGGCAAGGTCTGTGGGAGCGGTGGCCTATCTTGAGTGTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048197.10 |
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| CDS CAA 90 bp | GGAGCCGAGCTGAACACTCAAGATAGGCCACCGCTCCCACAGACCTaGCCATATCGTGGCCCTGGCACAGTGGGGAAGTATCCAGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GAELNTQDRPPLPQT*PYRGPGTVGKYPEV Trigger: AACCTCTGGATACTTCCCCACTGTGCCAGGGCCACGATATGGCAAGGTCTGTGGGAGCGGTGGCCTATCTTGAGTGTTCAGCTCGGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235680.2 |
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| CDS GCA 72 bp | CGACACACCTGGCACAGTGGGGAAGTATCCAGAGGTTaGCTAGCTTCCTACCTACCCTGTGGTAGGTCACGG | + |
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Preference number: 6 (lower is better) Translates to: RHTWHSGEVSRG*LASYLPCGRSR Trigger: CCGTGACCTACCACAGGGTAGGTAGGAAGCTAGGCAACCTCTGGATACTTCCCCACTGTGCCAGGTGTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117462.2 |
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| CDS CCA 72 bp | ACACTGTGGGACTGTAGCTCTCTGGGAAGGCCCCTTTaGCGAAGACCATCATCAGTGACGTCTTCCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TLWDCSSLGRPL*RRPSSVTSSRS Trigger: GCTGCGGGAAGACGTCACTGATGATGGTCTTCGCCAAAGGGGCCTTCCCAGAGAGCTACAGTCCCACAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CAA 72 bp | CTGAACACTCAAGATAGGCCACCGCTCCCACAGACCTaGCCATATCGTGGCCCTGGCACAGTGGGGAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: LNTQDRPPLPQT*PYRGPGTVGKY Trigger: ATACTTCCCCACTGTGCCAGGGCCACGATATGGCAAGGTCTGTGGGAGCGGTGGCCTATCTTGAGTGTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235680.2 |
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| CDS CAA 90 bp | GTCACGGGCTCCAGTCTTTTCTTCCGCAGGTTGTTCACCAGCACCTaGTCCTTACGCAGGTCTATCTTGCAGCCCACAACAATGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: VTGSSLFFRRLFTST*SLRRSILQPTTMMG Trigger: GCCCATCATTGTTGTGGGCTGCAAGATAGACCTGCGTAAGGACAAGGTGCTGGTGAACAACCTGCGGAAGAAAAGACTGGAGCCCGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CCA 72 bp | TTGGATTGGTCACATCGAAGCAGAGGAGCAAGACATTaGCATCAGGATAGAACAAGGGCCGGAGGCGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LDWSHRSRGARH*HQDRTRAGGGH Trigger: ATGACCGCCTCCGGCCCTTGTTCTATCCTGATGCCAATGTCTTGCTCCTCTGCTTCGATGTGACCAATCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CAA 72 bp | TCTATCTTGCAGCCCACAACAATGATGGGCACTCCCTaGCAGAAATGTGTCACCTCTGGGTACCACCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SILQPTTMMGTP*QKCVTSGYHRL Trigger: CAACCGGTGGTACCCAGAGGTGACACATTTCTGCAAGGGAGTGCCCATCATTGTTGTGGGCTGCAAGATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CAA 90 bp | GTGTCACCTCTGGGTACCACCGGTTGGAGACGTTGTCAAAGCTGTTaGGATTGGTCACATCGAAGCAGAGGAGCAAGACATTGGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: VSPLGTTGWRRCQSC*DWSHRSRGARHWHQ Trigger: CTGATGCCAATGTCTTGCTCCTCTGCTTCGATGTGACCAATCCAAACAGCTTTGACAACGTCTCCAACCGGTGGTACCCAGAGGTGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CAA 90 bp | TTCCGCAGGTTGTTCACCAGCACCTTGTCCTTACGCAGGTCTATCTaGCAGCCCACAACAATGATGGGCACTCCCTTGCAGAAATGTGTC | + |
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Preference number: 6 (lower is better) Translates to: FRRLFTSTLSLRRSI*QPTTMMGTPLQKCV Trigger: GACACATTTCTGCAAGGGAGTGCCCATCATTGTTGTGGGCTGCAAGATAGACCTGCGTAAGGACAAGGTGCTGGTGAACAACCTGCGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CCA 72 bp | AATGATGGGCACTCCCTTGCAGAAATGTGTCACCTCTaGGTACCACCGGTTGGAGACGTTGTCAAAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: NDGHSLAEMCHL*VPPVGDVVKAV Trigger: AACAGCTTTGACAACGTCTCCAACCGGTGGTACCCAGAGGTGACACATTTCTGCAAGGGAGTGCCCATCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CAA 72 bp | CTGGGTACCACCGGTTGGAGACGTTGTCAAAGCTGTTaGGATTGGTCACATCGAAGCAGAGGAGCAAGACAT | + |
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Preference number: 6 (lower is better) Translates to: LGTTGWRRCQSC*DWSHRSRGARH Trigger: ATGTCTTGCTCCTCTGCTTCGATGTGACCAATCCAAACAGCTTTGACAACGTCTCCAACCGGTGGTACCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CCA 72 bp | TTTGGAGGTGCACAGGTTTACCCTTCATCTGCAGAGTaGCATTATAGCGCTCAAACACTGTGGGACTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: FGGAQVYPSSAE*HYSAQTLWDCS Trigger: GCTACAGTCCCACAGTGTTTGAGCGCTATAATGCCACTCTGCAGATGAAGGGTAAACCTGTGCACCTCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CCA 72 bp | TGGGTACCACCGGTTGGAGACGTTGTCAAAGCTGTTTaGATTGGTCACATCGAAGCAGAGGAGCAAGACATT | + |
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Preference number: 6 (lower is better) Translates to: WVPPVGDVVKAV*IGHIEAEEQDI Trigger: AATGTCTTGCTCCTCTGCTTCGATGTGACCAATCCAAACAGCTTTGACAACGTCTCCAACCGGTGGTACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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| CDS CAA 72 bp | AAATGTGTCACCTCTGGGTACCACCGGTTGGAGACGTaGTCAAAGCTGTTTGGATTGGTCACATCGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: KCVTSGYHRLET*SKLFGLVTSKQ Trigger: CTGCTTCGATGTGACCAATCCAAACAGCTTTGACAACGTCTCCAACCGGTGGTACCCAGAGGTGACACATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048197.10 ENSMUST00000117462.2 ENSMUST00000235680.2 |
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