Pregenerated sensors for RHOBTB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021589Ensembl transcript IDs: ENSMUST00000022078.12, ENSMUST00000109606.3, ENSMUST00000220939.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCATGCTCTGCAGCTGTGTGATGATGAACAGCTCACAGATGTGCTaGAGTCTAGAGACCTGGTACATCTCAGCACAGATCAGGAGACAC | + |
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Preference number: 1 (lower is better) Translates to: GMLCSCVMMNSSQMC*SLETWYISAQIRRH Trigger: GTGTCTCCTGATCTGTGCTGAGATGTACCAGGTCTCTAGACTGCAGCACATCTGTGAGCTGTTCATCATCACACAGCTGCAGAGCATGCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| 3UTR GCA 90 bp | CTGGGCATGCTCTGCAGCTGTGTGATGATGAACAGCTCACAGATGTaGTGCAGTCTAGAGACCTGGTACATCTCAGCACAGATCAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: LGMLCSCVMMNSSQM*CSLETWYISAQIRR Trigger: TCTCCTGATCTGTGCTGAGATGTACCAGGTCTCTAGACTGCAGCACATCTGTGAGCTGTTCATCATCACACAGCTGCAGAGCATGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| 3UTR GCA 90 bp | CTGAAAAATGCCAGCATTAAACATGGCAGCCATCACTTCACATCGTaGCACCAAGATGGCCCTGTGGGCTGGCACAGTTGCTCCTTGTAT | + |
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Preference number: 1 (lower is better) Translates to: LKNASIKHGSHHFTS*HQDGPVGWHSCSLY Trigger: ATACAAGGAGCAACTGTGCCAGCCCACAGGGCCATCTTGGTGGCACGATGTGAAGTGATGGCTGCCATGTTTAATGCTGGCATTTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| 3UTR CCA 90 bp | GATGGGAGTCTCCACTCTGCTCCCCTGGCCGAAAGCTCTCTTTCCTaGCTATCAGCAACTTTTCTGCTTCTACAGAGAGAAGGTTTGAGT | + |
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Preference number: 1 (lower is better) Translates to: DGSLHSAPLAESSLS*LSATFLLLQREGLS Trigger: ACTCAAACCTTCTCTCTGTAGAAGCAGAAAAGTTGCTGATAGCCAGGAAAGAGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR TCA 90 bp | TTGGAAGTCCATAGACTACCTGCCTGCTTAGGTTTGCAGCCAGATTaGCAAGCAGATGTGGGTGGATGGTCCAGATGGGGCTACCATATT | + |
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Preference number: 1 (lower is better) Translates to: LEVHRLPACLGLQPD*QADVGGWSRWGYHI Trigger: AATATGGTAGCCCCATCTGGACCATCCACCCACATCTGCTTGTCAATCTGGCTGCAAACCTAAGCAGGCAGGTAGTCTATGGACTTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR TCA 90 bp | ATGCCTTTGAGCATCTTGCAGAACCATTTCTGCCAATATATGCTATaGGAGAAACTAACTCTGCCTTTTATCCCAGACACCATCGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: MPLSILQNHFCQYML*EKLTLPFIPDTIVS Trigger: AGAGACGATGGTGTCTGGGATAAAAGGCAGAGTTAGTTTCTCTCATAGCATATATTGGCAGAAATGGTTCTGCAAGATGCTCAAAGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR CCA 90 bp | AGAAATTGCAACAAAGCATATAGCCATCTAGAAATAACCTTTGATTaGGAAACAACCCTCACAATCACCAGTAATTTACCCAAGATCATT | + |
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Preference number: 1 (lower is better) Translates to: RNCNKAYSHLEITFD*ETTLTITSNLPKII Trigger: AATGATCTTGGGTAAATTACTGGTGATTGTGAGGGTTGTTTCCCAATCAAAGGTTATTTCTAGATGGCTATATGCTTTGTTGCAATTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR-3UTR CCA 90 bp | ATATGCTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCCCTGGCCGAAAGCTCTGCAGATGTGGGTGGATaGTCCAGATGGGGCTACCAT | + |
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Preference number: 2 (lower is better) Translates to: ICFPKDGSLHSAPLAESSADVGG*SRWGYH Trigger: ATGGTAGCCCCATCTGGACCATCCACCCACATCTGC...AGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTAGAGACCTGGTACATCTCAGCACAGATCAGGAGACACATGGCCTGAAAGATGGCCCTGTGGGCTaGCACAGTTGCTCCTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: QSRDLVHLSTDQETHGLKDGPVG*HSCSLY Trigger: ATACAAGGAGCAACTGTGCCAGCCCACAGGGCCATC...TTTCAGGCCATGTGTCTCCTGATCTGTGCTGAGATGTACCAGGTCTCTAGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTTAATCCTAGCATGTCTCTGTGGATGTGAGGCCAGCCTGGACTATAAAGCAGGTTTGCAGCCAGATTaGCAAGCAGATGTGGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: PLILACLCGCEASLDYKAGLQPD*QADVGG Trigger: TCCACCCACATCTGCTTGTCAATCTGGCTGCAAACC...TGCTTTATAGTCCAGGCTGGCCTCACATCCACAGAGACATGCTAGGATTAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR-3UTR TCA 90 bp | ATATGCTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCCCTGGCCGAAAGCTCTGAGAGAAGGTTTGAGTaGGAAAAAGACTTAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ICFPKDGSLHSAPLAESSERRFE*EKDLSQ Trigger: CTGGCTTAAGTCTTTTTCTCACTCAAACCTTCTCTC...AGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR-3UTR CCA 90 bp | CCCTTAATCCTAGCATGTCTCTGTGGATGTGAGGCCAGCCTGGACTATAAAGCAGGTGGATGGTCCAGATaGGGCTACCATATTGATTCA | + |
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Preference number: 2 (lower is better) Translates to: PLILACLCGCEASLDYKAGGWSR*GYHIDS Trigger: TGAATCAATATGGTAGCCCCATCTGGACCATCCACC...TGCTTTATAGTCCAGGCTGGCCTCACATCCACAGAGACATGCTAGGATTAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR CAA 90 bp | GAAAAACTTGAGAGACGTATTATAAAACCACAGAGGCTTCCTGGCTaGGTAGGTCTTGCAGTTCCTCAGGCAATTAATCTTTCCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: EKLERRIIKPQRLPG*VGLAVPQAINLSWC Trigger: ACACCAGGAAAGATTAATTGCCTGAGGAACTGCAAGACCTACCAAGCCAGGAAGCCTCTGTGGTTTTATAATACGTCTCTCAAGTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTTACAGAGAGAAGGTTTaGGTGAGAAAAAGACTTAAG | + |
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Preference number: 2 (lower is better) Translates to: RDIVSSIQRIHNRMQARPYREKV*VRKRLK Trigger: CTTAAGTCTTTTTCTCACTCAAACCTTCTCTCTGTA...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR-3UTR CCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTTGCTTGGAAAATAGGTaGAAGCAGAAATTGCAACAA | + |
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Preference number: 2 (lower is better) Translates to: RDIVSSIQRIHNRMQARPCLENR*KQKLQQ Trigger: TTGTTGCAATTTCTGCTTCCACCTATTTTCCAAGCA...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR-3UTR GCA 90 bp | CATCGAACCTTATCTCTAGACATGAAGATAAGCACGGACAGAGACAGATATACACAAGTGTCCCAAGGTTaGCTTTCAGATGTCTTATTG | + |
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Preference number: 2 (lower is better) Translates to: HRTLSLDMKISTDRDRYTQVSQG*LSDVLL Trigger: CAATAAGACATCTGAAAGGCAACCTTGGGACACTTG...TGTATATCTGTCTCTGTCCGTGCTTATCTTCATGTCTAGAGATAAGGTTCGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
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| 3UTR-3UTR CCA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCTCCCATGGTTACATTTaGCTTTTAAATGCCCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: NFYSYAIPISMLHWLVLFSHGYI*LLNAPY Trigger: ATAAGGGGCATTTAAAAGCCAAATGTAACCATGGGA...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR GCA 72 bp | GCCAGCATTAAACATGGCAGCCATCACTTCACATCGTaGCACCAAGATGGCCCTGTGGGCTGGCACAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: ASIKHGSHHFTS*HQDGPVGWHSC Trigger: GCAACTGTGCCAGCCCACAGGGCCATCTTGGTGGCACGATGTGAAGTGATGGCTGCCATGTTTAATGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| 3UTR CCA 72 bp | GCTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCCCTaGCCGAAAGCTCTCTTTCCTGGCTATCAGCAACTT | + |
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Preference number: 3 (lower is better) Translates to: ASPKMGVSTLLP*PKALFPGYQQL Trigger: AAGTTGCTGATAGCCAGGAAAGAGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR-3UTR CAA 90 bp | CCAGCATTAAACATGGCAGCCATCACTTCACATCGTGCCACCAAGATGGCCCTGCAGAGGCTTCCTGGCTaGGTAGGTCTTGCAGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: PALNMAAITSHRATKMALQRLPG*VGLAVP Trigger: AGGAACTGCAAGACCTACCAAGCCAGGAAGCCTCTG...CAGGGCCATCTTGGTGGCACGATGTGAAGTGATGGCTGCCATGTTTAATGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| 3UTR GCA 72 bp | GCATATATGCTTCCCCAAAGATGGGAGTCTCCACTCTaGTCCCCTGGCCGAAAGCTCTCTTTCCTGGCTATC | + |
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Preference number: 3 (lower is better) Translates to: AYMLPQRWESPL*SPGRKLSFLAI Trigger: GATAGCCAGGAAAGAGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATATATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR GCA 72 bp | CCAGGGAATGTCTTTGTAGAGGCGCTTGAGCATATATaGTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PGNVFVEALEHI*FPKDGSLHSAP Trigger: GGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATATATGCTCAAGCGCCTCTACAAAGACATTCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR CCA 72 bp | GCCATCACTTCACATCGTGCCACCAAGATGGCCCTGTaGGCTGGCACAGTTGCTCCTTGTATTTCAAAGACA | + |
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Preference number: 3 (lower is better) Translates to: AITSHRATKMAL*AGTVAPCISKT Trigger: TGTCTTTGAAATACAAGGAGCAACTGTGCCAGCCCACAGGGCCATCTTGGTGGCACGATGTGAAGTGATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| 3UTR GCA 72 bp | CTCTGCAGCTGTGTGATGATGAACAGCTCACAGATGTaGTGCAGTCTAGAGACCTGGTACATCTCAGCACAG | + |
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Preference number: 3 (lower is better) Translates to: LCSCVMMNSSQM*CSLETWYISAQ Trigger: CTGTGCTGAGATGTACCAGGTCTCTAGACTGCAGCACATCTGTGAGCTGTTCATCATCACACAGCTGCAGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| 3UTR CCA 72 bp | CTCCACTCTGCTCCCCTGGCCGAAAGCTCTCTTTCCTaGCTATCAGCAACTTTTCTGCTTCTACAGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: LHSAPLAESSLS*LSATFLLLQRE Trigger: TTCTCTCTGTAGAAGCAGAAAAGTTGCTGATAGCCAGGAAAGAGAGCTTTCGGCCAGGGGAGCAGAGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR CCA 72 bp | ATGAACAGCTCACAGATGTGCTGCAGTCTAGAGACCTaGTACATCTCAGCACAGATCAGGAGACACATGGCC | + |
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Preference number: 3 (lower is better) Translates to: MNSSQMCCSLET*YISAQIRRHMA Trigger: GGCCATGTGTCTCCTGATCTGTGCTGAGATGTACCAGGTCTCTAGACTGCAGCACATCTGTGAGCTGTTCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| 3UTR-3UTR CAA 90 bp | ATATGCTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCCCTGGCCGAAAGCTCTATCCCATGGTTACATTaGGCTTTTAAATGCCCCTTA | + |
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Preference number: 3 (lower is better) Translates to: ICFPKDGSLHSAPLAESSIPWLH*AFKCPL Trigger: TAAGGGGCATTTAAAAGCCAAATGTAACCATGGGAT...AGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR TCA 72 bp | TGGTACATCTCAGCACAGATCAGGAGACACATGGCCTaGAAAATGCCAGCATTAAACATGGCAGCCATCACT | + |
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Preference number: 3 (lower is better) Translates to: WYISAQIRRHMA*KMPALNMAAIT Trigger: AGTGATGGCTGCCATGTTTAATGCTGGCATTTTTCAGGCCATGTGTCTCCTGATCTGTGCTGAGATGTACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| 3UTR CCA 72 bp | TTCTACGTCTTCTATTCTCAATATGAAGTTCCAGTATaGCTTGCACAGGAGTGGGCTTCAGCTACCATGCCA | + |
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Preference number: 3 (lower is better) Translates to: FYVFYSQYEVPV*LAQEWASATMP Trigger: TGGCATGGTAGCTGAAGCCCACTCCTGTGCAAGCCATACTGGAACTTCATATTGAGAATAGAAGACGTAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR-3UTR CAA 90 bp | TGGACTATAAAGCAAGTTCCAGGACAGCTAGGAATGTTACACAGAGAAACCCCACAGACCCTTCTAAGTTaGGAAGTCCATAGACTACCT | + |
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Preference number: 3 (lower is better) Translates to: WTIKQVPGQLGMLHRETPQTLLS*EVHRLP Trigger: AGGTAGTCTATGGACTTCCAAACTTAGAAGGGTCTG...TGGGGTTTCTCTGTGTAACATTCCTAGCTGTCCTGGAACTTGCTTTATAGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR-3UTR CAA 90 bp | CATCGAACCTTATCTCTAGACATGAAGATAAGCACGGACAGAGACAGATATACACCAAGTGTCCCAAGGTaGCCTTTCAGATGTCTTATT | + |
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Preference number: 3 (lower is better) Translates to: HRTLSLDMKISTDRDRYTPSVPR*PFRCLI Trigger: AATAAGACATCTGAAAGGCAACCTTGGGACACTTGG...TGTATATCTGTCTCTGTCCGTGCTTATCTTCATGTCTAGAGATAAGGTTCGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
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| 3UTR TCA 72 bp | ATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCTaGATCCCATGGTTACATTTGGCTTTTAAATGCCCC | + |
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Preference number: 3 (lower is better) Translates to: IPISMLHWLVLF*IPWLHLAFKCP Trigger: GGGGCATTTAAAAGCCAAATGTAACCATGGGATTCAGAAGAGCACTAACCAGTGCAGCATAGAAATAGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR TCA 72 bp | GGGGCTACCATATTGATTCAAGTACCCTTGCTGAACTaGAACCAGATGACTATCAAAGTCTTGGGCAAATTT | + |
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Preference number: 3 (lower is better) Translates to: GATILIQVPLLN*NQMTIKVLGKF Trigger: AAATTTGCCCAAGACTTTGATAGTCATCTGGTTTCAGTTCAGCAAGGGTACTTGAATCAATATGGTAGCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR-3UTR CAA 90 bp | CATCGAACCTTATCTCTAGACATGAAGATAAGCACGGACAGAGACAGATATACACTTTCAGATGTCTTATaGAACAGCATCCAACTAGGA | + |
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Preference number: 3 (lower is better) Translates to: HRTLSLDMKISTDRDRYTLSDVL*NSIQLG Trigger: TCCTAGTTGGATGCTGTTCAATAAGACATCTGAAAG...TGTATATCTGTCTCTGTCCGTGCTTATCTTCATGTCTAGAGATAAGGTTCGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
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| 3UTR GCA 72 bp | CAAGAATTCTTTCCCCTTTATTTTGTAGTACTGGTATaGATAACAGGGCTCTCTGTATGGAATCTTAACACT | + |
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Preference number: 3 (lower is better) Translates to: QEFFPLYFVVLV*ITGLSVWNLNT Trigger: AGTGTTAAGATTCCATACAGAGAGCCCTGTTATGCATACCAGTACTACAAAATAAAGGGGAAAGAATTCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR GCA 72 bp | CAGTTCATATTAAAATTTCACCAAGTGTCCCAAGGTTaGCTTTCAGATGTCTTATTGAACAGCATCCAACTA | + |
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Preference number: 3 (lower is better) Translates to: QFILKFHQVSQG*LSDVLLNSIQL Trigger: TAGTTGGATGCTGTTCAATAAGACATCTGAAAGGCAACCTTGGGACACTTGGTGAAATTTTAATATGAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
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| CDS-3UTR CCA 90 bp | GGCAGCCATCACTTCACATCGTGCCACCAAGATGGCCCTGTGGGCTGGCACAGTCAGAGAACGATCTTGTaGGCTTCCACGACGCCCGTC | + |
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Preference number: 4 (lower is better) Translates to: GSHHFTSCHQDGPVGWHSQRTIL*ASTTPV Trigger: GACGGGCGTCGTGGAAGCCCACAAGATCGTTCTCTG...ACTGTGCCAGCCCACAGGGCCATCTTGGTGGCACGATGTGAAGTGATGGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| CDS-3UTR GCA 90 bp | CCCTTAATCCTAGCATGTCTCTGTGGATGTGAGGCCAGCCTGGACTATAAAGCACCGGGCGCGCGACCGTaGTGGCCGCGTTCAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: PLILACLCGCEASLDYKAPGARP*WPRSAT Trigger: TGTTGCTGAACGCGGCCAGCACGGTCGCGCGCCCGG...TGCTTTATAGTCCAGGCTGGCCTCACATCCACAGAGACATGCTAGGATTAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR GCA 90 bp | ATATGCTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCCCTGGCCGAAAGCTCTTGGAGGCCAGCTCCCTaGTGGGCATGCTCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ICFPKDGSLHSAPLAESSWRPAP*WACSAA Trigger: AGCTGCAGAGCATGCCCAGCAGGGAGCTGGCCTCCA...AGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CCA 90 bp | ATATGCTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCCCTGGCCGAAAGCTCTGGCCGGTTGTCCTGGTaGAACGTGTCGCCCTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: ICFPKDGSLHSAPLAESSGRLSW*NVSPSF Trigger: GAACGAGGGCGACACGTTCCACCAGGACAACCGGCC...AGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR TCA 90 bp | ATATGCTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCCCTGGCCGAAAGCTCTACAGCTCCCTCGGTCTaGAGTACACAGGGGGCATGT | + |
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Preference number: 4 (lower is better) Translates to: ICFPKDGSLHSAPLAESSTAPSV*STQGAC Trigger: ACATGCCCCCTGTGTACTTCAGACCGAGGGAGCTGT...AGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR TCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTCCAGGTATGTGCGGATaGGCCCCGACGGCCGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RDIVSSIQRIHNRMQARPPGMCG*APTAGC Trigger: ACAACCGGCCGTCGGGGCTCATCCGCACATACCTGG...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CCA 90 bp | GCCATCACTTCACATCGTGCCACCAAGATGGCCCTGTGGGCTGGCACAGTTGCTGGAGGTCGAATCCCATaGAAGGAGCTGGTCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: AITSHRATKMALWAGTVAGGRIP*KELVIF Trigger: GAAAATGACCAGCTCCTTCCATGGGATTCGACCTCC...AGCAACTGTGCCAGCCCACAGGGCCATCTTGGTGGCACGATGTGAAGTGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| CDS-3UTR CCA 90 bp | TGGACTATAAAGCAAGTTCCAGGACAGCTAGGAATGTTACACAGAGAAACCCCAGGCGCGCGACCGTGCTaGCCGCGTTCAGCAACAAGC | + |
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Preference number: 4 (lower is better) Translates to: WTIKQVPGQLGMLHRETPGARPC*PRSATS Trigger: GCTTGTTGCTGAACGCGGCCAGCACGGTCGCGCGCC...TGGGGTTTCTCTGTGTAACATTCCTAGCTGTCCTGGAACTTGCTTTATAGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR GCA 90 bp | TTGTCATCGAACCTTATCTCTAGACATGAAGATAAGCACGGACAGAGACAGATACCGGGCGCGCGACCGTaGTGGCCGCGTTCAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: LSSNLISRHEDKHGQRQIPGARP*WPRSAT Trigger: TGTTGCTGAACGCGGCCAGCACGGTCGCGCGCCCGG...TATCTGTCTCTGTCCGTGCTTATCTTCATGTCTAGAGATAAGGTTCGATGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
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| CDS-3UTR GCA 90 bp | CCCTTAATCCTAGCATGTCTCTGTGGATGTGAGGCCAGCCTGGACTATAAAGCACAGACGGGACAGTCGTaGACCACCAGCTTGACGTTC | + |
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Preference number: 4 (lower is better) Translates to: PLILACLCGCEASLDYKAQTGQS*TTSLTF Trigger: GAACGTCAAGCTGGTGGTGCACGACTGTCCCGTCTG...TGCTTTATAGTCCAGGCTGGCCTCACATCCACAGAGACATGCTAGGATTAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CCA 90 bp | TGGACTATAAAGCAAGTTCCAGGACAGCTAGGAATGTTACACAGAGAAACCCCAGACGGCCGGTTGTCCTaGTGGAACGTGTCGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: WTIKQVPGQLGMLHRETPDGRLS*WNVSPS Trigger: CGAGGGCGACACGTTCCACCAGGACAACCGGCCGTC...TGGGGTTTCTCTGTGTAACATTCCTAGCTGTCCTGGAACTTGCTTTATAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTCCGAACGCACTGGCCTaGTACTCAGTGAACACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDIVSSIQRIHNRMQARPPNALA*YSVNTG Trigger: CCCGGTGTTCACTGAGTACCAGGCCAGTGCGTTCGG...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTATCGTGCCACCAAGATaGCCCTGTGGGCTGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RDIVSSIQRIHNRMQARPIVPPR*PCGLAQ Trigger: CTGTGCCAGCCCACAGGGCCATCTTGGTGGCACGAT...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | ATATGCTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCCCTGGCCGAAAGCTCTAATGAAGCAGCCAGGTaGAAAGGCAGTCTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ICFPKDGSLHSAPLAESSNEAAR*KGSLSG Trigger: ACCACTCAGACTGCCTTTCCACCTGGCTGCTTCATT...AGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR TCA 90 bp | TGGACTATAAAGCAAGTTCCAGGACAGCTAGGAATGTTACACAGAGAAACCCCACGTGCACCACCAGCTTaGCGTTCCCGAACGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: WTIKQVPGQLGMLHRETPRAPPA*RSRTHW Trigger: CCAGTGCGTTCGGGAACGTCAAGCTGGTGGTGCACG...TGGGGTTTCTCTGTGTAACATTCCTAGCTGTCCTGGAACTTGCTTTATAGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTCAGAGAACGATCTTGTaGGCTTCCACGACGCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RDIVSSIQRIHNRMQARPQRTIL*ASTTPV Trigger: GACGGGCGTCGTGGAAGCCCACAAGATCGTTCTCTG...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR TCA 90 bp | GTCATCCTGCTAACATTGTCATCGAACCTTATCTCTAGACATGAAGATAAGCACCCAGGTATGTGCGGATaGGCCCCGACGGCCGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VILLTLSSNLISRHEDKHPGMCG*APTAGC Trigger: ACAACCGGCCGTCGGGGCTCATCCGCACATACCTGG...GTGCTTATCTTCATGTCTAGAGATAAGGTTCGATGACAATGTTAGCAGGATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
||
| CDS-3UTR CCA 90 bp | ATATGCTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCCCTGGCCGAAAGCTCTCTGAAAAATGCCAGCTaGGCAACAAGAGTCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ICFPKDGSLHSAPLAESSLKNAS*ATRVCV Trigger: TACACAGACTCTTGTTGCCCAGCTGGCATTTTTCAG...AGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR TCA 90 bp | CCCTTAATCCTAGCATGTCTCTGTGGATGTGAGGCCAGCCTGGACTATAAAGCAAGGCAGTCTGAGTGGTaGAACTTGGCCTTTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLILACLCGCEASLDYKARQSEW*NLAFLS Trigger: GCTCAAAAAGGCCAAGTTTCACCACTCAGACTGCCT...TGCTTTATAGTCCAGGCTGGCCTCACATCCACAGAGACATGCTAGGATTAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR TCA 90 bp | ATATGCTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCCCTGGCCGAAAGCTCTCTTCAAGTACATGTTTaGTGGCCATCTGTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ICFPKDGSLHSAPLAESSLQVHV*WPSVLF Trigger: GAAAAGCACAGATGGCCATCAAACATGTACTTGAAG...AGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR TCA 90 bp | CATGCTCTGCAGCTGTGTGATGATGAACAGCTCACAGATGTGCTGCAGTCTAGATCCAGCTCTTCCCACTaGAAAGCACAGAGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HALQLCDDEQLTDVLQSRSSSSH*KAQSRE Trigger: TTCTCTGCTCTGTGCTTTTCAGTGGGAAGAGCTGGA...TCTAGACTGCAGCACATCTGTGAGCTGTTCATCATCACACAGCTGCAGAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
||
| CDS-3UTR GCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTCATCACTTCACATCGTaGCACCAAGATGGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDIVSSIQRIHNRMQARPHHFTS*HQDGPV Trigger: CACAGGGCCATCTTGGTGGCACGATGTGAAGTGATG...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR GCA 90 bp | CCCTTAATCCTAGCATGTCTCTGTGGATGTGAGGCCAGCCTGGACTATAAAGCAAACAGCTCACAGATGTaGTGCAGTCTAGAGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLILACLCGCEASLDYKANSSQM*CSLETW Trigger: CCAGGTCTCTAGACTGCAGCACATCTGTGAGCTGTT...TGCTTTATAGTCCAGGCTGGCCTCACATCCACAGAGACATGCTAGGATTAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR GCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTCTGCTGGGCATGCTCTaGAGCTGTGTGATGATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RDIVSSIQRIHNRMQARPLLGML*SCVMMN Trigger: GTTCATCATCACACAGCTGCAGAGCATGCCCAGCAG...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | GTCATCCTGCTAACATTGTCATCGAACCTTATCTCTAGACATGAAGATAAGCACGGCCGGTTGTCCTGGTaGAACGTGTCGCCCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VILLTLSSNLISRHEDKHGRLSW*NVSPSF Trigger: GAACGAGGGCGACACGTTCCACCAGGACAACCGGCC...GTGCTTATCTTCATGTCTAGAGATAAGGTTCGATGACAATGTTAGCAGGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
||
| CDS-3UTR CCA 90 bp | ACACACCAGCCAAATTCTTTAAAAGTAAATAAGCTGCAGGTATTAGGCCATGGTGACGGCCGGTTGTCCTaGTGGAACGTGTCGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: THQPNSLKVNKLQVLGHGDGRLS*WNVSPS Trigger: CGAGGGCGACACGTTCCACCAGGACAACCGGCCGTC...ACCATGGCCTAATACCTGCAGCTTATTTACTTTTAAAGAATTTGGCTGGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
||
| CDS-3UTR CCA 90 bp | CCCTTAATCCTAGCATGTCTCTGTGGATGTGAGGCCAGCCTGGACTATAAAGCAGGAGGTCGAATCCCATaGAAGGAGCTGGTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLILACLCGCEASLDYKAGGRIP*KELVIF Trigger: GAAAATGACCAGCTCCTTCCATGGGATTCGACCTCC...TGCTTTATAGTCCAGGCTGGCCTCACATCCACAGAGACATGCTAGGATTAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | TGGACTATAAAGCAAGTTCCAGGACAGCTAGGAATGTTACACAGAGAAACCCCAACCAAGATGGCCCTGTaGGCTGGCACAGTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WTIKQVPGQLGMLHRETPTKMAL*AGTVAP Trigger: AGGAGCAACTGTGCCAGCCCACAGGGCCATCTTGGT...TGGGGTTTCTCTGTGTAACATTCCTAGCTGTCCTGGAACTTGCTTTATAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR TCA 90 bp | ACACACCAGCCAAATTCTTTAAAAGTAAATAAGCTGCAGGTATTAGGCCATGGTCGTGCACCACCAGCTTaGCGTTCCCGAACGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: THQPNSLKVNKLQVLGHGRAPPA*RSRTHW Trigger: CCAGTGCGTTCGGGAACGTCAAGCTGGTGGTGCACG...ACCATGGCCTAATACCTGCAGCTTATTTACTTTTAAAGAATTTGGCTGGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
||
| CDS-3UTR GCA 90 bp | CCCTTAATCCTAGCATGTCTCTGTGGATGTGAGGCCAGCCTGGACTATAAAGCAACATGGCCTGAAAAATaGCAGCTGGGCAACAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLILACLCGCEASLDYKATWPEK*QLGNKS Trigger: ACTCTTGTTGCCCAGCTGGCATTTTTCAGGCCATGT...TGCTTTATAGTCCAGGCTGGCCTCACATCCACAGAGACATGCTAGGATTAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR GCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTAGCTCACAGATGTGCTaGAGTCTAGAGACCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RDIVSSIQRIHNRMQARPSSQMC*SLETWY Trigger: GTACCAGGTCTCTAGACTGCAGCACATCTGTGAGCT...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR GCA 90 bp | ATATGCTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCCCTGGCCGAAAGCTCTCTGTATTCTGCCAGCTaGTTCAAGTACATGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ICFPKDGSLHSAPLAESSLYSAS*FKYMFD Trigger: ATCAAACATGTACTTGAAGCAGCTGGCAGAATACAG...AGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | CATCGAACCTTATCTCTAGACATGAAGATAAGCACGGACAGAGACAGATATACACCGAACGCACTGGCCTaGTACTCAGTGAACACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRTLSLDMKISTDRDRYTPNALA*YSVNTG Trigger: CCCGGTGTTCACTGAGTACCAGGCCAGTGCGTTCGG...TGTATATCTGTCTCTGTCCGTGCTTATCTTCATGTCTAGAGATAAGGTTCGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
||
| CDS-3UTR CCA 90 bp | GTGCTGCAGTCTAGAGACCTGGTACATCTCAGCACAGATCAGGAGACACATGGCTCCCATGGAAGGAGCTaGTCATTTTCCTTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLQSRDLVHLSTDQETHGSHGRS*SFSFSS Trigger: TGAAGAAAAGGAAAATGACCAGCTCCTTCCATGGGA...GCCATGTGTCTCCTGATCTGTGCTGAGATGTACCAGGTCTCTAGACTGCAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTACATCTCAGCACAGATCAGGAGACACATGGCCTGAAAAATGCCAGCATTACCACATCCACACACTaGCAGCAGAGCAGCAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LVHLSTDQETHGLKNASITTSTH*QQSSKL Trigger: TAACTTGCTGCTCTGCTGCCAGTGTGTGGATGTGGT...AATGCTGGCATTTTTCAGGCCATGTGTCTCCTGATCTGTGCTGAGATGTACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTAATCCTAGCATGTCTCTGTGGATGTGAGGCCAGCCTGGACTATAAAGCAATGGCAAAGAGATCCTaGGTGGTTCGGATGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: PLILACLCGCEASLDYKAMAKRS*VVRMIL Trigger: CAGTATCATCCGAACCACCCAGGATCTCTTTGCCAT...TGCTTTATAGTCCAGGCTGGCCTCACATCCACAGAGACATGCTAGGATTAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTTTCCTGGCTAGCACCTaGAAGCACAGCATCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RDIVSSIQRIHNRMQARPFLAST*KHSISV Trigger: AACAGAGATGCTGTGCTTCCAGGTGCTAGCCAGGAA...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTAACAATAACAGGCAATaGTGGGTTGCTGGGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RDIVSSIQRIHNRMQARPNNNRQ*WVAGGF Trigger: GAAGCCCCCAGCAACCCACCATTGCCTGTTATTGTT...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | CCCTTAATCCTAGCATGTCTCTGTGGATGTGAGGCCAGCCTGGACTATAAAGCAAGATCAGGAGACACATaGCCTGAAAAATGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLILACLCGCEASLDYKARSGDT*PEKCQL Trigger: CAGCTGGCATTTTTCAGGCCATGTGTCTCCTGATCT...TGCTTTATAGTCCAGGCTGGCCTCACATCCACAGAGACATGCTAGGATTAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR GCA 90 bp | CATCGAACCTTATCTCTAGACATGAAGATAAGCACGGACAGAGACAGATATACACAGACGGGACAGTCGTaGACCACCAGCTTGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRTLSLDMKISTDRDRYTQTGQS*TTSLTF Trigger: GAACGTCAAGCTGGTGGTGCACGACTGTCCCGTCTG...TGTATATCTGTCTCTGTCCGTGCTTATCTTCATGTCTAGAGATAAGGTTCGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGCTTGGTAGGTCTTGCAGTTCCTCAGGCAATTAATCTTTCCTGGTGTTTTGACAGGCATCTTTTCTaGCTGTTCAAGCTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLVGLAVPQAINLSWCFDRHLF*LFKLRR Trigger: CCTCCTCAGCTTGAACAGCCAGAAAAGATGCCTGTC...AAAACACCAGGAAAGATTAATTGCCTGAGGAACTGCAAGACCTACCAAGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTAATCCTAGCATGTCTCTGTGGATGTGAGGCCAGCCTGGACTATAAAGCAAGCAGCATGAAAACATaGCTTACAGAGCAGAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: PLILACLCGCEASLDYKASSMKT*LTEQRT Trigger: CGTTCTCTGCTCTGTAAGCCATGTTTTCATGCTGCT...TGCTTTATAGTCCAGGCTGGCCTCACATCCACAGAGACATGCTAGGATTAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | TGGACTATAAAGCAAGTTCCAGGACAGCTAGGAATGTTACACAGAGAAACCCCAGACAGGCATCTTTTCTaGCTGTTCAAGCTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WTIKQVPGQLGMLHRETPDRHLF*LFKLRR Trigger: CCTCCTCAGCTTGAACAGCCAGAAAAGATGCCTGTC...TGGGGTTTCTCTGTGTAACATTCCTAGCTGTCCTGGAACTTGCTTTATAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCTTGCTGGGGGCTTCCTaGCTAGCACCTGGAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NFYSYAIPISMLHWLVLFLLGAS*LAPGST Trigger: TGTGCTTCCAGGTGCTAGCCAGGAAGCCCCCAGCAA...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTGGAAACGCCATAAACTaGAATCAGTACACTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RDIVSSIQRIHNRMQARPGNAIN*NQYTLG Trigger: GCCAAGAGTGTACTGATTCCAGTTTATGGCGTTTCC...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTTCCCATGGAAGGAGCTaGTCATTTTCCTTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RDIVSSIQRIHNRMQARPSHGRS*SFSFSS Trigger: TGAAGAAAAGGAAAATGACCAGCTCCTTCCATGGGA...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCGATGGCCCTGTGGGCTaGCACAGTTGCTCCTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NFYSYAIPISMLHWLVLFDGPVG*HSCSLY Trigger: ATACAAGGAGCAACTGTGCCAGCCCACAGGGCCATC...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR TCA 90 bp | TGGACTATAAAGCAAGTTCCAGGACAGCTAGGAATGTTACACAGAGAAACCCCAGAAACTTGGCCTTTTTaGGCAGGTCTACAATGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WTIKQVPGQLGMLHRETPETWPF*AGLQCR Trigger: TCGACATTGTAGACCTGCTCAAAAAGGCCAAGTTTC...TGGGGTTTCTCTGTGTAACATTCCTAGCTGTCCTGGAACTTGCTTTATAGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR TCA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCGGTGGAAAGGCAGTCTaGGTGGTGAAACTTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NFYSYAIPISMLHWLVLFGGKAV*VVKLGL Trigger: AAGGCCAAGTTTCACCACTCAGACTGCCTTTCCACC...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR TCA 90 bp | CATCGAACCTTATCTCTAGACATGAAGATAAGCACGGACAGAGACAGATATACAGTCCCAGATGGGCCCTaGGCACGCTCAAATTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HRTLSLDMKISTDRDRYTVPDGP*ARSNLK Trigger: TTTTAAATTTGAGCGTGCTCAGGGCCCATCTGGGAC...TGTATATCTGTCTCTGTCCGTGCTTATCTTCATGTCTAGAGATAAGGTTCGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
||
| CDS-3UTR CCA 90 bp | CATCGAACCTTATCTCTAGACATGAAGATAAGCACGGACAGAGACAGATATACAGGAGGTCGAATCCCATaGAAGGAGCTGGTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRTLSLDMKISTDRDRYTGGRIP*KELVIF Trigger: GAAAATGACCAGCTCCTTCCATGGGATTCGACCTCC...TGTATATCTGTCTCTGTCCGTGCTTATCTTCATGTCTAGAGATAAGGTTCGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
||
| CDS-3UTR CCA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCAATAACAGGCAATGGTaGGTTGCTGGGGGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NFYSYAIPISMLHWLVLFNNRQW*VAGGFL Trigger: CAGGAAGCCCCCAGCAACCCACCATTGCCTGTTATT...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| 3UTR CAA 72 bp | GAGAGACGTATTATAAAACCACAGAGGCTTCCTGGCTaGGTAGGTCTTGCAGTTCCTCAGGCAATTAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERRIIKPQRLPG*VGLAVPQAINL Trigger: AAGATTAATTGCCTGAGGAACTGCAAGACCTACCAAGCCAGGAAGCCTCTGTGGTTTTATAATACGTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
||
| CDS-3UTR TCA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCCCTGGGTGGTTCGGATaGTACTGGAATCCTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: NFYSYAIPISMLHWLVLFPGWFG*YWNPEC Trigger: ACATTCAGGATTCCAGTATCATCCGAACCACCCAGG...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR TCA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCTTAGTGGCGATGAAATaGAGCAGCCAGGTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NFYSYAIPISMLHWLVLFLVAMK*SSQVER Trigger: CCTTTCCACCTGGCTGCTTCATTTCATCGCCACTAA...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCACCACATCCACACACTaGCAGCAGAGCAGCAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NFYSYAIPISMLHWLVLFTTSTH*QQSSKL Trigger: TAACTTGCTGCTCTGCTGCCAGTGTGTGGATGTGGT...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS-3UTR CCA 90 bp | TGGACTATAAAGCAAGTTCCAGGACAGCTAGGAATGTTACACAGAGAAACCCCACGACATTTCCGGGAGTaGATATACTTCCTGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: WTIKQVPGQLGMLHRETPRHFRE*IYFLYS Trigger: AGAATACAGGAAGTATATCCACTCCCGGAAATGTCG...TGGGGTTTCTCTGTGTAACATTCCTAGCTGTCCTGGAACTTGCTTTATAGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR GCA 90 bp | TGGACTATAAAGCAAGTTCCAGGACAGCTAGGAATGTTACACAGAGAAACCCCAATACTTCCTGTATTCTaGCAGCTGCTTCAAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: WTIKQVPGQLGMLHRETPILPVF*QLLQVH Trigger: ATGTACTTGAAGCAGCTGGCAGAATACAGGAAGTAT...TGGGGTTTCTCTGTGTAACATTCCTAGCTGTCCTGGAACTTGCTTTATAGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR TCA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCTCCACTGAAAGGTCTTaGAATTCAGGCTTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NFYSYAIPISMLHWLVLFSTERS*NSGFWL Trigger: CAGCCAAAAGCCTGAATTTCAAGACCTTTCAGTGGA...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CCA 90 bp | CATCGAACCTTATCTCTAGACATGAAGATAAGCACGGACAGAGACAGATATACATCCCATGGAAGGAGCTaGTCATTTTCCTTTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HRTLSLDMKISTDRDRYTSHGRS*SFSFSS Trigger: TGAAGAAAAGGAAAATGACCAGCTCCTTCCATGGGA...TGTATATCTGTCTCTGTCCGTGCTTATCTTCATGTCTAGAGATAAGGTTCGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
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| CDS-3UTR TCA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCCCACTGAAAAGCACCTaGATAAATGAAGCGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NFYSYAIPISMLHWLVLFPLKST*INEAQN Trigger: ATTCTGCGCTTCATTTATTCAGGTGCTTTTCAGTGG...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR TCA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCACTTCGTTCTTCCACTaGAAGGTCTTGAAATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NFYSYAIPISMLHWLVLFTSFFH*KVLKFR Trigger: CCTGAATTTCAAGACCTTTCAGTGGAAGAACGAAGT...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR CAA 72 bp | ACTCAGTCACTCTTACCAACTTCCTGGCTTTACATATaGATCAAGAAAGTATTTGTTTTTCTGGGGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQSLLPTSWLYI*IKKVFVFLGYS Trigger: GCTGTACCCCAGAAAAACAAATACTTTCTTGATCAATATGTAAAGCCAGGAAGTTGGTAAGAGTGACTGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| 3UTR CAA 72 bp | AGCTTTGCTACTTCATACCAAATAGTCTATCAGTTCTaGAAAAGAACTCAATTCAAGCCATTGGCATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SFATSYQIVYQF*KRTQFKPLASY Trigger: ATATGATGCCAATGGCTTGAATTGAGTTCTTTTCAAGAACTGATAGACTATTTGGTATGAAGTAGCAAAGCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS TCA 90 bp | TCTCGTCCCCCGACACCAGCGGGCTTCTTCCCAGGTATGTGCGGATaGGCCCCGACGGCCGGTTGTCCTGGTGGAACGTGTCGCCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SRPPTPAGFFPGMCG*APTAGCPGGTCRPR Trigger: ACGAGGGCGACACGTTCCACCAGGACAACCGGCCGTCGGGGCTCATCCGCACATACCTGGGAAGAAGCCCGCTGGTGTCGGGGGACGAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
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| CDS CCA 90 bp | GGACAGTCGTGCACCACCAGCTTGACGTTCCCGAACGCACTGGCCTaGTACTCAGTGAACACCGGGCGCGCGACCGTGCTGGCCGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQSCTTSLTFPNALA*YSVNTGRATVLAAF Trigger: GAACGCGGCCAGCACGGTCGCGCGCCCGGTGTTCACTGAGTACCAGGCCAGTGCGTTCGGGAACGTCAAGCTGGTGGTGCACGACTGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
||
| CDS CCA 90 bp | CTTCCCAGGTATGTGCGGATGAGCCCCGACGGCCGGTTGTCCTGGTaGAACGTGTCGCCCTCGTTCCCCAACGCCACGATGTGGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPRYVRMSPDGRLSW*NVSPSFPNATMWMD Trigger: GTCCATCCACATCGTGGCGTTGGGGAACGAGGGCGACACGTTCCACCAGGACAACCGGCCGTCGGGGCTCATCCGCACATACCTGGGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
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| CDS CCA 90 bp | CTTCTTCCCAGGTATGTGCGGATGAGCCCCGACGGCCGGTTGTCCTaGTGGAACGTGTCGCCCTCGTTCCCCAACGCCACGATGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LLPRYVRMSPDGRLS*WNVSPSFPNATMWM Trigger: CATCCACATCGTGGCGTTGGGGAACGAGGGCGACACGTTCCACCAGGACAACCGGCCGTCGGGGCTCATCCGCACATACCTGGGAAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
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| CDS CCA 90 bp | AATAACAGGCAATGGTGGGTTGCTGGGGGCTTCCTGGCTAGCACCTaGAAGCACAGCATCTCTGTTTATGGCAAAGAGATCCTGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NNRQWWVAGGFLAST*KHSISVYGKEILGG Trigger: ACCACCCAGGATCTCTTTGCCATAAACAGAGATGCTGTGCTTCCAGGTGCTAGCCAGGAAGCCCCCAGCAACCCACCATTGCCTGTTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CAA 90 bp | CTTCCTGGCTTGGTAGGTCTTGCAGTTCCTCAGGCAATTAATCTTTCCTGGTGTGAGCAGAGAACGATCTaGTGGGCTTCCACGACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPGLVGLAVPQAINLSWCEQRTI*WASTTP Trigger: GGGCGTCGTGGAAGCCCACAAGATCGTTCTCTGCTC...ACACCAGGAAAGATTAATTGCCTGAGGAACTGCAAGACCTACCAAGCCAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
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| CDS-3UTR CAA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCAGCCCCGACGGCCGGTaGTCCTGGTGGAACGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NFYSYAIPISMLHWLVLFSPDGR*SWWNVS Trigger: CGACACGTTCCACCAGGACAACCGGCCGTCGGGGCT...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CAA 90 bp | ACACACCAGCCAAATTCTTTAAAAGTAAATAAGCTGCAGGTATTAGGCCATGGTAGCCCCGACGGCCGGTaGTCCTGGTGGAACGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: THQPNSLKVNKLQVLGHGSPDGR*SWWNVS Trigger: CGACACGTTCCACCAGGACAACCGGCCGTCGGGGCT...ACCATGGCCTAATACCTGCAGCTTATTTACTTTTAAAGAATTTGGCTGGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
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| CDS-3UTR CAA 90 bp | TGGACTATAAAGCAAGTTCCAGGACAGCTAGGAATGTTACACAGAGAAACCCCAGAGCAGAGAACGATCTaGTGGGCTTCCACGACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WTIKQVPGQLGMLHRETPEQRTI*WASTTP Trigger: GGGCGTCGTGGAAGCCCACAAGATCGTTCTCTGCTC...TGGGGTTTCTCTGTGTAACATTCCTAGCTGTCCTGGAACTTGCTTTATAGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CAA 90 bp | TGGACTATAAAGCAAGTTCCAGGACAGCTAGGAATGTTACACAGAGAAACCCCAACAGGCAATGGTGGGTaGCTGGGGGCTTCCTGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: WTIKQVPGQLGMLHRETPTGNGG*LGASWL Trigger: TAGCCAGGAAGCCCCCAGCAACCCACCATTGCCTGT...TGGGGTTTCTCTGTGTAACATTCCTAGCTGTCCTGGAACTTGCTTTATAGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CAA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTCAGAGGCTTCCTGGCTaGGTAGGTCTTGCAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RDIVSSIQRIHNRMQARPQRLPG*VGLAVP Trigger: AGGAACTGCAAGACCTACCAAGCCAGGAAGCCTCTG...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CAA 90 bp | CCCTTAATCCTAGCATGTCTCTGTGGATGTGAGGCCAGCCTGGACTATAAAGCAGTAGCTCCCAGTTCTTaGGCAAGTTGGATCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLILACLCGCEASLDYKAVAPSS*ASWIPS Trigger: AGAAGGGATCCAACTTGCCAAAGAACTGGGAGCTAC...TGCTTTATAGTCCAGGCTGGCCTCACATCCACAGAGACATGCTAGGATTAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CAA 90 bp | ATATGCTTCCCCAAAGATGGGAGTCTCCACTCTGCTCCCCTGGCCGAAAGCTCTGCTTCAAGTACATGTTaGATGGCCATCTGTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ICFPKDGSLHSAPLAESSASSTC*MAICAF Trigger: AAAAGCACAGATGGCCATCAAACATGTACTTGAAGC...AGAGCTTTCGGCCAGGGGAGCAGAGTGGAGACTCCCATCTTTGGGGAAGCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS TCA 90 bp | GTAGTTAGTGGCGATGAAATGAAGCAGCCAGGTGGAAAGGCAGTCTaGGTGGTGAAACTTGGCCTTTTTGAGCAGGTCTACAATGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VVSGDEMKQPGGKAV*VVKLGLFEQVYNVE Trigger: CTCGACATTGTAGACCTGCTCAAAAAGGCCAAGTTTCACCACTCAGACTGCCTTTCCACCTGGCTGCTTCATTTCATCGCCACTAACTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CAA 90 bp | AGGGATATAGTCAGCAGCATACAAAGAATACACAACAGGATGCAAGCCCGGCCTCAGTTCTTTGGCAAGTaGGATCCCTTCTGTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RDIVSSIQRIHNRMQARPQFFGK*DPFCGG Trigger: ACCACCACAGAAGGGATCCAACTTGCCAAAGAACTG...AGGCCGGGCTTGCATCCTGTTGTGTATTCTTTGTATGCTGCTGACTATATCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS GCA 90 bp | TTCCATATAATTACCATTAAACATGGCAGCCATCACTTCACATCGTaGCACCAAGATGGCCCTGTGGGCTGGCACAGTTGCTCCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FHIITIKHGSHHFTS*HQDGPVGWHSCSLY Trigger: ATACAAGGAGCAACTGTGCCAGCCCACAGGGCCATCTTGGTGGCACGATGTGAAGTGATGGCTGCCATGTTTAATGGTAATTATATGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS GCA 90 bp | CAGCGACATTTCCGGGAGTGGATATACTTCCTGTATTCTGCCAGCTaGTTCAAGTACATGTTTGATGGCCATCTGTGCTTTTCAACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QRHFREWIYFLYSAS*FKYMFDGHLCFSTK Trigger: TTTTGTTGAAAAGCACAGATGGCCATCAAACATGTACTTGAAGCAGCTGGCAGAATACAGGAAGTATATCCACTCCCGGAAATGTCGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CAA 90 bp | GTCATCCTGCTAACATTGTCATCGAACCTTATCTCTAGACATGAAGATAAGCACCAGTTCTTTGGCAAGTaGGATCCCTTCTGTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VILLTLSSNLISRHEDKHQFFGK*DPFCGG Trigger: ACCACCACAGAAGGGATCCAACTTGCCAAAGAACTG...GTGCTTATCTTCATGTCTAGAGATAAGGTTCGATGACAATGTTAGCAGGATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
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| CDS-3UTR CAA 90 bp | TGGACTATAAAGCAAGTTCCAGGACAGCTAGGAATGTTACACAGAGAAACCCCATGGCACAGTTGCTCCTaGTATTTCAAAGACAACATC | + |
|
Preference number: 5 (lower is better) Translates to: WTIKQVPGQLGMLHRETPWHSCS*YFKDNI Trigger: GATGTTGTCTTTGAAATACAAGGAGCAACTGTGCCA...TGGGGTTTCTCTGTGTAACATTCCTAGCTGTCCTGGAACTTGCTTTATAGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS-3UTR CAA 90 bp | AATTTCTATTCCTACGCTATTCCTATTTCTATGCTGCACTGGTTAGTGCTCTTCTTGAAATTCAGGCTTTaGGCTGAATATGAGGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: NFYSYAIPISMLHWLVLFLKFRL*AEYEVV Trigger: AACTACCTCATATTCAGCCAAAAGCCTGAATTTCAA...GAAGAGCACTAACCAGTGCAGCATAGAAATAGGAATAGCGTAGGAATAGAAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS CCA 90 bp | AAGAGTCTGTGTATAAGTATTCTAAAAATGACAAGAATGTCTCTTTaGAAACGCCATAAACTGGAATCAGTACACTCTTGGCTTCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: KSLCISILKMTRMSL*KRHKLESVHSWLPY Trigger: ATATGGAAGCCAAGAGTGTACTGATTCCAGTTTATGGCGTTTCCAAAGAGACATTCTTGTCATTTTTAGAATACTTATACACAGACTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS CCA 72 bp | AGGTATGTGCGGATGAGCCCCGACGGCCGGTTGTCCTaGTGGAACGTGTCGCCCTCGTTCCCCAACGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: RYVRMSPDGRLS*WNVSPSFPNAT Trigger: CGTGGCGTTGGGGAACGAGGGCGACACGTTCCACCAGGACAACCGGCCGTCGGGGCTCATCCGCACATACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
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| CDS CAA 90 bp | AGCGGGCTTCTTCCCAGGTATGTGCGGATGAGCCCCGACGGCCGGTaGTCCTGGTGGAACGTGTCGCCCTCGTTCCCCAACGCCACGATG | + |
|
Preference number: 6 (lower is better) Translates to: SGLLPRYVRMSPDGR*SWWNVSPSFPNATM Trigger: CATCGTGGCGTTGGGGAACGAGGGCGACACGTTCCACCAGGACAACCGGCCGTCGGGGCTCATCCGCACATACCTGGGAAGAAGCCCGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
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| CDS CCA 72 bp | TATGTGCGGATGAGCCCCGACGGCCGGTTGTCCTGGTaGAACGTGTCGCCCTCGTTCCCCAACGCCACGATG | + |
|
Preference number: 6 (lower is better) Translates to: YVRMSPDGRLSW*NVSPSFPNATM Trigger: CATCGTGGCGTTGGGGAACGAGGGCGACACGTTCCACCAGGACAACCGGCCGTCGGGGCTCATCCGCACATA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
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| CDS CCA 72 bp | TGCACCACCAGCTTGACGTTCCCGAACGCACTGGCCTaGTACTCAGTGAACACCGGGCGCGCGACCGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CTTSLTFPNALA*YSVNTGRATVL Trigger: CAGCACGGTCGCGCGCCCGGTGTTCACTGAGTACCAGGCCAGTGCGTTCGGGAACGTCAAGCTGGTGGTGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
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| CDS CAA 72 bp | CTTCCCAGGTATGTGCGGATGAGCCCCGACGGCCGGTaGTCCTGGTGGAACGTGTCGCCCTCGTTCCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPRYVRMSPDGR*SWWNVSPSFPN Trigger: GTTGGGGAACGAGGGCGACACGTTCCACCAGGACAACCGGCCGTCGGGGCTCATCCGCACATACCTGGGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
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| CDS CAA 90 bp | TCACTGTCAAAAATGTCCCAGACGGGACAGTCGTGCACCACCAGCTaGACGTTCCCGAACGCACTGGCCTGGTACTCAGTGAACACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSKMSQTGQSCTTS*TFPNALAWYSVNTG Trigger: CCCGGTGTTCACTGAGTACCAGGCCAGTGCGTTCGGGAACGTCAAGCTGGTGGTGCACGACTGTCCCGTCTGGGACATTTTTGACAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
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| CDS CCA 72 bp | GGAGCAGAAGAGGGCGTCCTTAACAATAACAGGCAATaGTGGGTTGCTGGGGGCTTCCTGGCTAGCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GAEEGVLNNNRQ*WVAGGFLASTW Trigger: CCAGGTGCTAGCCAGGAAGCCCCCAGCAACCCACCATTGCCTGTTATTGTTAAGGACGCCCTCTTCTGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS CAA 72 bp | AAAATGTCCCAGACGGGACAGTCGTGCACCACCAGCTaGACGTTCCCGAACGCACTGGCCTGGTACTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: KMSQTGQSCTTS*TFPNALAWYSV Trigger: CACTGAGTACCAGGCCAGTGCGTTCGGGAACGTCAAGCTGGTGGTGCACGACTGTCCCGTCTGGGACATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
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| CDS CAA 90 bp | CAGGAGCAGAAGAGGGCGTCCTTAACAATAACAGGCAATGGTGGGTaGCTGGGGGCTTCCTGGCTAGCACCTGGAAGCACAGCATCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QEQKRASLTITGNGG*LGASWLAPGSTASL Trigger: CAGAGATGCTGTGCTTCCAGGTGCTAGCCAGGAAGCCCCCAGCAACCCACCATTGCCTGTTATTGTTAAGGACGCCCTCTTCTGCTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS GCA 72 bp | CAATCACTGTCAAAAATGTCCCAGACGGGACAGTCGTaGACCACCAGCTTGACGTTCCCGAACGCACTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QSLSKMSQTGQS*TTSLTFPNALA Trigger: GGCCAGTGCGTTCGGGAACGTCAAGCTGGTGGTGCACGACTGTCCCGTCTGGGACATTTTTGACAGTGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
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| CDS CAA 72 bp | CTCTTCCCACTGAAAAGCACAGAGCAGAGAACGATCTaGTGGGCTTCCACGACGCCCGTCACTTCTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LFPLKSTEQRTI*WASTTPVTSGW Trigger: CCACCCAGAAGTGACGGGCGTCGTGGAAGCCCACAAGATCGTTCTCTGCTCTGTGCTTTTCAGTGGGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220939.2 |
||
| CDS CAA 72 bp | AAGAGGGCGTCCTTAACAATAACAGGCAATGGTGGGTaGCTGGGGGCTTCCTGGCTAGCACCTGGAAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: KRASLTITGNGG*LGASWLAPGST Trigger: TGTGCTTCCAGGTGCTAGCCAGGAAGCCCCCAGCAACCCACCATTGCCTGTTATTGTTAAGGACGCCCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS CAA 72 bp | AGCATGAAAACATGGCTTACAGAGCAGAGAACGATCTaGTGGGCTTCCACGACGCCCGTCACTTCTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SMKTWLTEQRTI*WASTTPVTSGW Trigger: CCACCCAGAAGTGACGGGCGTCGTGGAAGCCCACAAGATCGTTCTCTGCTCTGTAAGCCATGTTTTCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS GCA 72 bp | ATTACCATTAAACATGGCAGCCATCACTTCACATCGTaGCACCAAGATGGCCCTGTGGGCTGGCACAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ITIKHGSHHFTS*HQDGPVGWHSC Trigger: GCAACTGTGCCAGCCCACAGGGCCATCTTGGTGGCACGATGTGAAGTGATGGCTGCCATGTTTAATGGTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS CAA 72 bp | GAGTTCCAGATAGGTAGCTCCCAGTTCTTTGGCAAGTaGGATCCCTTCTGTGGTGGTAACACAGCTCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: EFQIGSSQFFGK*DPFCGGNTAPS Trigger: CGAGGGAGCTGTGTTACCACCACAGAAGGGATCCAACTTGCCAAAGAACTGGGAGCTACCTATCTGGAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000109606.3 |
||
| CDS TCA 72 bp | ATGTGTTTTAATGCCGCCACACCTGGCTGTTCAAGCTaGGGAGGTCGAATCCCATGGAAGGAGCTGGTCATT | + |
|
Preference number: 6 (lower is better) Translates to: MCFNAATPGCSS*GGRIPWKELVI Trigger: AATGACCAGCTCCTTCCATGGGATTCGACCTCCTCAGCTTGAACAGCCAGGTGTGGCGGCATTAAAACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109606.3 |
||
| CDS CCA 72 bp | AGACCTGGTACATCTCAGCACAGATCAGGAGACACATaGCCTGAAAAATGCCAGCTGGGCAACAAGAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPGTSQHRSGDT*PEKCQLGNKSL Trigger: CAGACTCTTGTTGCCCAGCTGGCATTTTTCAGGCCATGTGTCTCCTGATCTGTGCTGAGATGTACCAGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
||
| CDS TCA 72 bp | GCTTTCAAGACAGGCATCTTTTCTGGCTGTTCAAGCTaGGGAGGTCGAATCCCATGGAAGGAGCTGGTCATT | + |
|
Preference number: 6 (lower is better) Translates to: AFKTGIFSGCSS*GGRIPWKELVI Trigger: AATGACCAGCTCCTTCCATGGGATTCGACCTCCTCAGCTTGAACAGCCAGAAAAGATGCCTGTCTTGAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000220939.2 |
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| CDS TCA 72 bp | AAGAGATCCTGGGTGGTTCGGATGATACTGGAATCCTaGATGTCGGCCGGGCTTTTCACATTGAAAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: KRSWVVRMILES*MSAGLFTLKSS Trigger: GCTGCTTTTCAATGTGAAAAGCCCGGCCGACATTCAGGATTCCAGTATCATCCGAACCACCCAGGATCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS TCA 72 bp | CTCTGTTTATGGCAAAGAGATCCTGGGTGGTTCGGATaGTACTGGAATCCTGAATGTCGGCCGGGCTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LCLWQRDPGWFG*YWNPECRPGFS Trigger: TGAAAAGCCCGGCCGACATTCAGGATTCCAGTATCATCCGAACCACCCAGGATCTCTTTGCCATAAACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS TCA 72 bp | TGGAAAGGCAGTCTGAGTGGTGAAACTTGGCCTTTTTaGGCAGGTCTACAATGTCGAGGTTCATGGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: WKGSLSGETWPF*AGLQCRGSWRP Trigger: TGGCCTCCATGAACCTCGACATTGTAGACCTGCTCAAAAAGGCCAAGTTTCACCACTCAGACTGCCTTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS TCA 72 bp | GCAGAGCAGCAAGTTATTCAAGTCGGAGTGATAGTGTaGTGCCTCAGCTTTCAAGACAGGCATCTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: AEQQVIQVGVIV*CLSFQDRHLFW Trigger: CCAGAAAAGATGCCTGTCTTGAAAGCTGAGGCATCACACTATCACTCCGACTTGAATAACTTGCTGCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022078.12 ENSMUST00000220939.2 |
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| CDS GCA 72 bp | TTCCGGGAGTGGATATACTTCCTGTATTCTGCCAGCTaGTTCAAGTACATGTTTGATGGCCATCTGTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: FREWIYFLYSAS*FKYMFDGHLCF Trigger: AAAGCACAGATGGCCATCAAACATGTACTTGAAGCAGCTGGCAGAATACAGGAAGTATATCCACTCCCGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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| CDS CAA 90 bp | AGTGGATATACTTCCTGTATTCTGCCAGCTGCTTCAAGTACATGTTaGATGGCCATCTGTGCTTTTCAACAAAACTTCGTTCTTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: SGYTSCILPAASSTC*MAICAFQQNFVLPL Trigger: CAGTGGAAGAACGAAGTTTTGTTGAAAAGCACAGATGGCCATCAAACATGTACTTGAAGCAGCTGGCAGAATACAGGAAGTATATCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022078.12 |
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