Pregenerated sensors for RHOBTB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022075Ensembl transcript IDs: ENSMUST00000022665.4
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTTTTGTCTCCCTGGAATCCAGAGCACCCATGTACTAAGGGACTaGAAGCAGCACCTCCCTCTCCTGGCTCACTCACAGCCCCACCCC | + |
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Preference number: 1 (lower is better) Translates to: CFCLPGIQSTHVLRD*KQHLPLLAHSQPHP Trigger: GGGGTGGGGCTGTGAGTGAGCCAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCCAGGGAGACAAAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR TCA 90 bp | CAGATGTTTTCCTGCCCTGCCTGGAATTGTAGGTGGACCCTGTTCTaGTCTGCAGGGCTGGCTCCTCTTAGCCTGGGCCACATTGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: QMFSCPAWNCRWTLF*SAGLAPLSLGHIGW Trigger: CCAGCCAATGTGGCCCAGGCTAAGAGGAGCCAGCCCTGCAGATCAGAACAGGGTCCACCTACAATTCCAGGCAGGGCAGGAAAACATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR GCA 90 bp | AAGTCTACACTGCCTGCAGTCAGTCCTTACAGGATGCTGGCAGGCTaGAGTTTATTCTTCTCCCCGCCAGCAGCCACACCTCACGGCCTA | + |
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Preference number: 1 (lower is better) Translates to: KSTLPAVSPYRMLAG*SLFFSPPAATPHGL Trigger: TAGGCCGTGAGGTGTGGCTGCTGGCGGGGAGAAGAATAAACTGCAGCCTGCCAGCATCCTGTAAGGACTGACTGCAGGCAGTGTAGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR TCA 90 bp | TTACAGTTCCCGAGAGAGATACCCCTGTATCGTCCAAGGAAGGTGTaGGAAGCTGCCTGCCTTTTCCATGAGTGCAGGCTTCTCCACACT | + |
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Preference number: 1 (lower is better) Translates to: LQFPREIPLYRPRKV*EAACLFHECRLLHT Trigger: AGTGTGGAGAAGCCTGCACTCATGGAAAAGGCAGGCAGCTTCTCACACCTTCCTTGGACGATACAGGGGTATCTCTCTCGGGAACTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR GCA 90 bp | CAGGCGGCTCAGCCCTGTAAATCACTTGGGAGACCCAATTCCCCTTaGTCATTAGGACAGACATCTACCTATCATTTACAGTTCCCGAGA | + |
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Preference number: 1 (lower is better) Translates to: QAAQPCKSLGRPNSP*SLGQTSTYHLQFPR Trigger: TCTCGGGAACTGTAAATGATAGGTAGATGTCTGTCCTAATGAGCAAGGGGAATTGGGTCTCCCAAGTGATTTACAGGGCTGAGCCGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR GCA 90 bp | CTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGGCTCACTCACAGCCCCACCCCCAGCACTGTGAGACCTaGTACTACTTGTTCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LRDCKQHLPLLAHSQPHPQHCET*YYLFLL Trigger: CAGAAGGAACAAGTAGTAGCAGGTCTCACAGTGCTG...GGGGTGGGGCTGTGAGTGAGCCAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGGCTCACTCACAGCCCCACCCCGTCCTTACAGGATGCTaGCAGGCTGCAGTTTATTCT | + |
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Preference number: 2 (lower is better) Translates to: LRDCKQHLPLLAHSQPHPVLTGC*QAAVYS Trigger: AGAATAAACTGCAGCCTGCCAGCATCCTGTAAGGAC...GGGGTGGGGCTGTGAGTGAGCCAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCCTGGGGGTGTTATGCCAGACTTGTCCCACACTGGAGTTTCTCCTGCTTGTGTGCGGGAAGGGTaGAGTAGAGAACCCACATTG | + |
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Preference number: 2 (lower is better) Translates to: PTPGGVMPDLSHTGVSPACVREG*SREPTL Trigger: CAATGTGGGTTCTCTACTTCACCCTTCCCGCACACA...AGCAGGAGAAACTCCAGTGTGGGACAAGTCTGGCATAACACCCCCAGGGGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR TCA 90 bp | GGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGCGTCCAAGGAAGGTGTaGGAAGCTGCCTGCCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: GIQSTHVLRDCKQHLPLLRPRKV*EAACLF Trigger: GAAAAGGCAGGCAGCTTCTCACACCTTCCTTGGACG...CAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCTACCCACCACTAAGTCTACACTGCCTGCAGTCAGTCCTTACAGGATGCTGTCTGATCTGCAGGGCTaGCTCCTCTTAGCCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LLPTTKSTLPAVSPYRMLSDLQG*LLLAWA Trigger: GGCCCAGGCTAAGAGGAGCCAGCCCTGCAGATCAGA...CAGCATCCTGTAAGGACTGACTGCAGGCAGTGTAGACTTAGTGGTGGGTAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCTTTTGTCTCCCTGGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGAGGTGGACCCTGTTCTaGTCTGCAGGGCTGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SCFCLPGIQSTHVLRDCKRWTLF*SAGLAP Trigger: AGGAGCCAGCCCTGCAGATCAGAACAGGGTCCACCT...CTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCCAGGGAGACAAAAGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCCTGGGGGTGTTATGCCAGACTTGTCCCACACTGGAGTTTCTCCTGCTAGAGGAAGCTGCCTCTaGCCAAAGCAGACACCAATA | + |
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Preference number: 2 (lower is better) Translates to: PTPGGVMPDLSHTGVSPARGSCL*PKQTPI Trigger: TATTGGTGTCTGCTTTGGTCAGAGGCAGCTTCCTCT...AGCAGGAGAAACTCCAGTGTGGGACAAGTCTGGCATAACACCCCCAGGGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCTACCCACCACTAAGTCTACACTGCCTGCAGTCAGTCCTTACAGGATGCTGTCCTGCTCCCCACCTTaGGGCAGATGTTTTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LLPTTKSTLPAVSPYRMLSCSPP*GRCFPA Trigger: GGCAGGAAAACATCTGCCCCAAGGTGGGGAGCAGGA...CAGCATCCTGTAAGGACTGACTGCAGGCAGTGTAGACTTAGTGGTGGGTAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CCA 90 bp | CAGACTTGTCCCACACTGGAGTTTCTCCTGCTTTTGTCTCCCTGGAATCCAGAGAGGGGTGAACTGGCCTaGGTGGGGCATGGTGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: QTCPTLEFLLLLSPWNPERGELA*VGHGVL Trigger: GAGAACACCATGCCCCACCCAGGCCAGTTCACCCCT...CTCTGGATTCCAGGGAGACAAAAGCAGGAGAAACTCCAGTGTGGGACAAGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR TCA 90 bp | GGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGAGGATTCTGGTTAGGTaGATTCCCTCGTCACCTGTC | + |
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Preference number: 2 (lower is better) Translates to: GIQSTHVLRDCKQHLPLLRILVR*IPSSPV Trigger: GACAGGTGACGAGGGAATTCACCTAACCAGAATCCT...CAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGGGTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTCTCCATTCAGCCTTATaGAGATGTACACCCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: GLGGAWCSPWSSSTSTDLLHSAL*RCTPYR Trigger: CCTGTAGGGTGTACATCTTCATAAGGCTGAATGGAG...AAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACCCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTAGTACAGGTCCTCCCCTaGAAGGCATTGGAGTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: VGHGVLLGLPPPPQIFLLVQVLP*KALEWL Trigger: CAACCACTCCAATGCCTTTCAGGGGAGGACCTGTAC...TAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTATGCCTGCCTTTTCCATaGGTGCAGGCTTCTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: VGHGVLLGLPPPPQIFLLCLPFP*VQASPH Trigger: GTGTGGAGAAGCCTGCACTCATGGAAAAGGCAGGCA...TAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CCA 90 bp | GACCCAGCAGGCCTTGGGGAGTGGCATCCTCAGAAACGGAGGGTACAGGTCCTCCTAGGAGACTTGATGTaGGCTCTGAAGACTTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: DPAGLGEWHPQKRRVQVLLGDLM*ALKTSF Trigger: AAAAGAAGTCTTCAGAGCCCACATCAAGTCTCCTAG...GAGGACCTGTACCCTCCGTTTCTGAGGATGCCACTCCCCAAGGCCTGCTGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR CAA 90 bp | GGGGTGTTATGCCAGACTTGTCCCACACTGGAGTTTCTCCTGCTTTaGTCTCCCTGGAATCCAGAGCACCCATGTACTAAGGGACTGCAA | + |
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Preference number: 2 (lower is better) Translates to: GVLCQTCPTLEFLLL*SPWNPEHPCTKGLQ Trigger: TTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCCAGGGAGACAAAAGCAGGAGAAACTCCAGTGTGGGACAAGTCTGGCATAACACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCTTTTGTCTCCCTGGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGACCCCAGAACTTTCATaGCCTACTCCCTCATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: SCFCLPGIQSTHVLRDCKTPELS*PTPSWD Trigger: GTCCCATGAGGGAGTAGGTCATGAAAGTTCTGGGGT...CTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCCAGGGAGACAAAAGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCTTTTGTCTCCCTGGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGGGGCAGATGTTTTCCTaGCCTGCCTGGAATTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: SCFCLPGIQSTHVLRDCKGQMFS*PAWNCR Trigger: CCTACAATTCCAGGCAGGGCAGGAAAACATCTGCCC...CTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCCAGGGAGACAAAAGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTTGCCTTTTCCATGAGTaGAGGCTTCTCCACACTAGA | + |
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Preference number: 2 (lower is better) Translates to: GGAWCSPWSSSTSTDLSPCLFHE*RLLHTR Trigger: TCTAGTGTGGAGAAGCCTGCACTCATGGAAAAGGCA...AGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTACTAGCCTGTCCATCTTTTCCTGCCCTGCCTaGAATTGTAGGTGGACCCTG | + |
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Preference number: 2 (lower is better) Translates to: SPWSSSTSTDLSPTSLSIFSCPA*NCRWTL Trigger: CAGGGTCCACCTACAATTCCAGGCAGGGCAGGAAAA...GATGGACAGGCTAGTAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CCA 90 bp | GGTTGTGGGTTTGTGTTTTTACCCCCATCCTCTAAGACAACACTGAGTGACATGGCAGGCCTTGGGGAGTaGCATCCTCAGAAACGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GCGFVFLPPSSKTTLSDMAGLGE*HPQKRR Trigger: CCTCCGTTTCTGAGGATGCCACTCCCCAAGGCCTGC...CATGTCACTCAGTGTTGTCTTAGAGGATGGGGGTAAAAACACAAACCCACAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR GCA 90 bp | GGTACAGGTCCTCCCCTGAAAGGCATTGGAGTGGTTGGTACTACTGACCCTTCACCACTAAGTCTACACTaGCTGCAGTCAGTCCTTACA | + |
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Preference number: 2 (lower is better) Translates to: GTGPPLKGIGVVGTTDPSPLSLH*LQSVLT Trigger: TGTAAGGACTGACTGCAGGCAGTGTAGACTTAGTGG...TGAAGGGTCAGTAGTACCAACCACTCCAATGCCTTTCAGGGGAGGACCTGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTAGAAGCTTTCCTCCACTaGCTCTATTGTCAAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: VGHGVLLGLPPPPQIFLLEAFLH*LYCQVQ Trigger: CTGGACTTGACAATAGAGCCAGTGGAGGAAAGCTTC...TAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTAAGACCCAATTCCCCTTaGTCATTAGGACAGACATCT | + |
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Preference number: 2 (lower is better) Translates to: VGHGVLLGLPPPPQIFLLRPNSP*SLGQTS Trigger: AGATGTCTGTCCTAATGAGCAAGGGGAATTGGGTCT...TAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CCA 90 bp | GGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGTATCCTGCATCAAGGTaGAAAAGGTACAAAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: GIQSTHVLRDCKQHLPLLYPASR*KRYKAI Trigger: AATGGCTTTGTACCTTTTCCACCTTGATGCAGGATA...CAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR TCA 90 bp | GGTTGTGGGTTTGTGTTTTTACCCCCATCCTCTAAGACAACACTGAGTGACATGAAAATATCCGAGCTCTaGGCTCTCTCCTGCTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GCGFVFLPPSSKTTLSDMKISEL*ALSCSP Trigger: TGGGGAGCAGGAGAGAGCTCAGAGCTCGGATATTTT...CATGTCACTCAGTGTTGTCTTAGAGGATGGGGGTAAAAACACAAACCCACAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CCA 90 bp | GGGGACCCCAGAACTTTCATGACCTACTCCCTCATGGGACTTCACCTCGTAAGTATCGTAATTAGGAAATaGGAAGGGTCAACTGAGACC | + |
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Preference number: 2 (lower is better) Translates to: GDPRTFMTYSLMGLHLVSIVIRK*EGSTET Trigger: GGTCTCAGTTGACCCTTCCCATTTCCTAATTACGAT...ACTTACGAGGTGAAGTCCCATGAGGGAGTAGGTCATGAAAGTTCTGGGGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTACTAGCCTGTCCATCATTCTTTTGGGGAGATaGAGGATAACATGGTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SPWSSSTSTDLSPTSLSIILLGR*RITWSW Trigger: CCAAGACCATGTTATCCTTCATCTCCCCAAAAGAAT...GATGGACAGGCTAGTAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CCA 90 bp | CAGACTTGTCCCACACTGGAGTTTCTCCTGCTTTTGTCTCCCTGGAATCCAGAGGGTTGCATTTGTTTCTaGGGTTGCTTTAATTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: QTCPTLEFLLLLSPWNPEGCICF*GCFNSS Trigger: GCTGGAATTAAAGCAACCCCAGAAACAAATGCAACC...CTCTGGATTCCAGGGAGACAAAAGCAGGAGAAACTCCAGTGTGGGACAAGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR TCA 72 bp | TCCTGCCCTGCCTGGAATTGTAGGTGGACCCTGTTCTaGTCTGCAGGGCTGGCTCCTCTTAGCCTGGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: SCPAWNCRWTLF*SAGLAPLSLGH Trigger: GTGGCCCAGGCTAAGAGGAGCCAGCCCTGCAGATCAGAACAGGGTCCACCTACAATTCCAGGCAGGGCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR CCA 72 bp | CCCTGTTCTGATCTGCAGGGCTGGCTCCTCTTAGCCTaGGCCACATTGGCTGGTGAGAACGGCTCTGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: PCSDLQGWLLLA*ATLAGENGSAL Trigger: AAGGGCAGAGCCGTTCTCACCAGCCAATGTGGCCCAGGCTAAGAGGAGCCAGCCCTGCAGATCAGAACAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CAA 90 bp | GGGTCCACCTGCTGCACACCAGCTCTGACAGCTGTGGGGGTAGGGGTGGGTCCCCCTCCACTGGCTCTATaGTCAAGTCCAGAGAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: GSTCCTPALTAVGVGVGPPPLAL*SSPERK Trigger: TTTTCTCTCTGGACTTGACAATAGAGCCAGTGGAGG...GGGACCCACCCCTACCCCCACAGCTGTCAGAGCTGGTGTGCAGCAGGTGGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR GCA 72 bp | CTGCCTGCAGTCAGTCCTTACAGGATGCTGGCAGGCTaGAGTTTATTCTTCTCCCCGCCAGCAGCCACACCT | + |
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Preference number: 3 (lower is better) Translates to: LPAVSPYRMLAG*SLFFSPPAATP Trigger: AGGTGTGGCTGCTGGCGGGGAGAAGAATAAACTGCAGCCTGCCAGCATCCTGTAAGGACTGACTGCAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR GCA 72 bp | CTCCCTGGAATCCAGAGCACCCATGTACTAAGGGACTaGAAGCAGCACCTCCCTCTCCTGGCTCACTCACAG | + |
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Preference number: 3 (lower is better) Translates to: LPGIQSTHVLRD*KQHLPLLAHSQ Trigger: CTGTGAGTGAGCCAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCCAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR CCA 72 bp | GGAATTGTAGGTGGACCCTGTTCTGATCTGCAGGGCTaGCTCCTCTTAGCCTGGGCCACATTGGCTGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: GIVGGPCSDLQG*LLLAWATLAGE Trigger: CTCACCAGCCAATGTGGCCCAGGCTAAGAGGAGCCAGCCCTGCAGATCAGAACAGGGTCCACCTACAATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CAA 90 bp | CTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGGCTCACTCACAGCCCCACCCCCCACACAATTGTAGGTaGCATTTGTTTCTGGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: LRDCKQHLPLLAHSQPHPPHNCR*HLFLGL Trigger: CAACCCCAGAAACAAATGCAACCTACAATTGTGTGG...GGGGTGGGGCTGTGAGTGAGCCAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR GCA 72 bp | TGTGACATAGTCCAGAGGAGCATGTTCTTGGGACACTaGCCCACCCCTGGGGGTGTTATGCCAGACTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: CDIVQRSMFLGH*PTPGGVMPDLS Trigger: GGACAAGTCTGGCATAACACCCCCAGGGGTGGGGCAGTGTCCCAAGAACATGCTCCTCTGGACTATGTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR CCA 72 bp | AGTCTACACTGCCTGCAGTCAGTCCTTACAGGATGCTaGCAGGCTGCAGTTTATTCTTCTCCCCGCCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SLHCLQSVLTGC*QAAVYSSPRQQ Trigger: CTGCTGGCGGGGAGAAGAATAAACTGCAGCCTGCCAGCATCCTGTAAGGACTGACTGCAGGCAGTGTAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR TCA 72 bp | CCGAGAGAGATACCCCTGTATCGTCCAAGGAAGGTGTaGGAAGCTGCCTGCCTTTTCCATGAGTGCAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: PREIPLYRPRKV*EAACLFHECRL Trigger: AAGCCTGCACTCATGGAAAAGGCAGGCAGCTTCTCACACCTTCCTTGGACGATACAGGGGTATCTCTCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR GCA 72 bp | CTAAGTCTACACTGCCTGCAGTCAGTCCTTACAGGATaGTGGCAGGCTGCAGTTTATTCTTCTCCCCGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LSLHCLQSVLTG*WQAAVYSSPRQ Trigger: CTGGCGGGGAGAAGAATAAACTGCAGCCTGCCAGCATCCTGTAAGGACTGACTGCAGGCAGTGTAGACTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CAA 90 bp | GTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTAAAGGTACAAAGCCATTaGAGCCCCGAAGCCCACACT | + |
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Preference number: 3 (lower is better) Translates to: VGHGVLLGLPPPPQIFLLKVQSH*SPEAHT Trigger: AGTGTGGGCTTCGGGGCTCAAATGGCTTTGTACCTT...TAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CAA 90 bp | GGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGCCCGTAGAGTCACCTTaGGAAGAGAAAAGTATCCTG | + |
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Preference number: 3 (lower is better) Translates to: GIQSTHVLRDCKQHLPLLPVESP*EEKSIL Trigger: CAGGATACTTTTCTCTTCCAAAGGTGACTCTACGGG...CAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR-3UTR CAA 90 bp | TTAGGAAATGGGAAGGGTCAACTGAGACCCAGTGTCAATCCCACGGGGGCTTCCGTCTTGGTGGTGCTTTaGAGTTTGGGTTTCTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LGNGKGQLRPSVNPTGASVLVVL*SLGFSC Trigger: ACAGGAGAAACCCAAACTCAAAAGCACCACCAAGAC...GGAAGCCCCCGTGGGATTGACACTGGGTCTCAGTTGACCCTTCCCATTTCCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR TCA 72 bp | ATCAGCACTGTGAGACCTGCTACTACTTGTTCCTTCTaGCAAGACCAGATCAGAACTCGAGGTCCCGGTACC | + |
|
Preference number: 3 (lower is better) Translates to: ISTVRPATTCSF*QDQIRTRGPGT Trigger: GGTACCGGGACCTCGAGTTCTGATCTGGTCTTGTCAGAAGGAACAAGTAGTAGCAGGTCTCACAGTGCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| 3UTR CCA 72 bp | TGTCCCACACTGGAGTTTCTCCTGCTTTTGTCTCCCTaGAATCCAGAGCACCCATGTACTAAGGGACTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: CPTLEFLLLLSP*NPEHPCTKGLQ Trigger: TTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCCAGGGAGACAAAAGCAGGAGAAACTCCAGTGTGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| 3UTR-3UTR CAA 90 bp | GGTACAGGTCCTCCCCTGAAAGGCATTGGAGTGGTTGGTACTACTGACCCTTCACCTGTTAGGCTGTTTTaGCTCCCATCTCATAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GTGPPLKGIGVVGTTDPSPVRLF*LPSHKR Trigger: CCTTTTATGAGATGGGAGCAAAAACAGCCTAACAGG...TGAAGGGTCAGTAGTACCAACCACTCCAATGCCTTTCAGGGGAGGACCTGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| 3UTR GCA 72 bp | TGTTATGCCAGACTTGTCCCACACTGGAGTTTCTCCTaGTTTTGTCTCCCTGGAATCCAGAGCACCCATGTA | + |
|
Preference number: 3 (lower is better) Translates to: CYARLVPHWSFS*FCLPGIQSTHV Trigger: TACATGGGTGCTCTGGATTCCAGGGAGACAAAAGCAGGAGAAACTCCAGTGTGGGACAAGTCTGGCATAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| 3UTR CCA 72 bp | CAGACAAGCCCGAGTACAGGGGAAGCTTTCCTCCACTaGCTCTATTGTCAAGTCCAGAGAGAAAATATCCGA | + |
|
Preference number: 3 (lower is better) Translates to: QTSPSTGEAFLH*LYCQVQRENIR Trigger: TCGGATATTTTCTCTCTGGACTTGACAATAGAGCCAGTGGAGGAAAGCTTCCCCTGTACTCGGGCTTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCTTCCTCCACCTCCACAGATCTTTCTCCTACTAGCCTGTCCATCCTCATTAAGGCATTGGAGTGGTaGGTACTACTGACCCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: WSSSTSTDLSPTSLSILIKALEW*VLLTLH Trigger: ATGAAGGGTCAGTAGTACCAACCACTCCAATGCCTT...AATGAGGATGGACAGGCTAGTAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| 3UTR TCA 72 bp | TTACCCCCATCCTCTAAGACAACACTGAGTGACATGTaGCATAGTCCAGAGGAGCATGTTCTTGGGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: LPPSSKTTLSDM*HSPEEHVLGTL Trigger: CAGTGTCCCAAGAACATGCTCCTCTGGACTATGTCACATGTCACTCAGTGTTGTCTTAGAGGATGGGGGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| 3UTR GCA 72 bp | TCTTCCTCCTCCTTCATCCATGTCAGATGTAATGTGTaGGGGAAGGGTGAAGTAGAGAACCCACATTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: SSSSFIHVRCNV*GKGEVENPHCT Trigger: AGTACAATGTGGGTTCTCTACTTCACCCTTCCCGCACACATTACATCTGACATGGATGAAGGAGGAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| 3UTR TCA 72 bp | GGTTTGTGTTTTTACCCCCATCCTCTAAGACAACACTaGGTGACATGTGACATAGTCCAGAGGAGCATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GLCFYPHPLRQH*VTCDIVQRSMF Trigger: GAACATGCTCCTCTGGACTATGTCACATGTCACTCAGTGTTGTCTTAGAGGATGGGGGTAAAAACACAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| 3UTR CCA 72 bp | TCCCGGTACCACACAATTGTAGGTTGCATTTGTTTCTaGGGTTGCTTTAATTCCAGCTTAAGCAACCTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRYHTIVGCICF*GCFNSSLSNLA Trigger: AGCTAGGTTGCTTAAGCTGGAATTAAAGCAACCCCAGAAACAAATGCAACCTACAATTGTGTGGTACCGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| 3UTR GCA 72 bp | TACCACACAATTGTAGGTTGCATTTGTTTCTGGGGTTaGTTTAATTCCAGCTTAAGCAACCTAGCTAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: YHTIVGCICFWG*FNSSLSNLARS Trigger: GGACCTAGCTAGGTTGCTTAAGCTGGAATTAAAGCAACCCCAGAAACAAATGCAACCTACAATTGTGTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR TCA 90 bp | CTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGGCTCACTCACAGCCCCACCCCGCAACTGGTACTGGGTaGGGGTGGCATTGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRDCKQHLPLLAHSQPHPATGTG*GWHCRP Trigger: GGGCCTGCAATGCCACCCTCACCCAGTACCAGTTGC...GGGGTGGGGCTGTGAGTGAGCCAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | CTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGGCTCACTCACAGCCCCACCCCGGATCCCCAGCTCTTTaGCGACTTCCCGACCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRDCKQHLPLLAHSQPHPGSPAL*RLPDPS Trigger: AGAAGGGTCGGGAAGTCGCCAAAGAGCTGGGGATCC...GGGGTGGGGCTGTGAGTGAGCCAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | GACCCAGCAGGCCTTGGGGAGTGGCATCCTCAGAAACGGAGGGTACAGGTCCTCTTCCAGAACTGCAGGTaGCGGCGGGAGATGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: DPAGLGEWHPQKRRVQVLFQNCR*RREMSA Trigger: TGCGCTCATCTCCCGCCGCCACCTGCAGTTCTGGAA...GAGGACCTGTACCCTCCGTTTCTGAGGATGCCACTCCCCAAGGCCTGCTGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | CTGCTGAGCACAGAACCCACCCTTCCTCCTCCTCTTCCTCCTCCTTCATCCATGGGGTCTTCCAGGAGGTaGGCGGGGCACTCCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSTEPTLPPPLPPPSSMGSSRR*AGHSSL Trigger: CAGCGAGGAGTGCCCCGCCCACCTCCTGGAAGACCC...CATGGATGAAGGAGGAGGAAGAGGAGGAGGAAGGGTGGGTTCTGTGCTCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGGTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTACAGCCACCGCCGCTTaGGCTGCCTCCGCAGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLGGAWCSPWSSSTSTDLTATAA*AASAGV Trigger: TACACCTGCGGAGGCAGCCCAAGCGGCGGTGGCTGT...AAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACCCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR GCA 90 bp | CTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGGCTCACTCACAGCCCCACCCCTTTTGTGGGCAAAGATaGGCACGCGCTCCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRDCKQHLPLLAHSQPHPFCGQR*ARAPAA Trigger: TGCTGCAGGAGCGCGTGCGCATCTTTGCCCACAAAA...GGGGTGGGGCTGTGAGTGAGCCAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR TCA 90 bp | GGTACAGGTCCTCCCCTGAAAGGCATTGGAGTGGTTGGTACTACTGACCCTTCAGGTGGCGGCGGGAGATaGGCGCAGCCCGAATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTGPPLKGIGVVGTTDPSGGGGR*AQPEWH Trigger: ATGCCATTCGGGCTGCGCTCATCTCCCGCCGCCACC...TGAAGGGTCAGTAGTACCAACCACTCCAATGCCTTTCAGGGGAGGACCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR TCA 90 bp | CTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGGCTCACTCACAGCCCCACCCCTGTGAGCAATGTGCATaGGGTCCCGCTCATTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRDCKQHLPLLAHSQPHPCEQCA*GPAHSH Trigger: GTGAGAATGAGCGGGACCTCATGCACATTGCTCACA...GGGGTGGGGCTGTGAGTGAGCCAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| 3UTR CAA 72 bp | GATCTGCAGGGCTGGCTCCTCTTAGCCTGGGCCACATaGGCTGGTGAGAACGGCTCTGCCCTTAGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLQGWLLLAWAT*AGENGSALRIL Trigger: CAGAATCCTAAGGGCAGAGCCGTTCTCACCAGCCAATGTGGCCCAGGCTAAGAGGAGCCAGCCCTGCAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR GCA 90 bp | CTGCTGAGCACAGAACCCACCCTTCCTCCTCCTCTTCCTCCTCCTTCATCCATGGGGAGGAAGGGTGCTTaGAGTAGAGGCCGCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLSTEPTLPPPLPPPSSMGRKGA*SRGRCT Trigger: TGTGCAGCGGCCTCTACTGCAAGCACCCTTCCTCCC...CATGGATGAAGGAGGAGGAAGAGGAGGAGGAAGGGTGGGTTCTGTGCTCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | GACCCAGCAGGCCTTGGGGAGTGGCATCCTCAGAAACGGAGGGTACAGGTCCTCGTAAGATCCCGTCACTaGTTGAAGCCCTTAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPAGLGEWHPQKRRVQVLVRSRH*LKPLGQ Trigger: CTGGCCTAAGGGCTTCAACCAGTGACGGGATCTTAC...GAGGACCTGTACCCTCCGTTTCTGAGGATGCCACTCCCCAAGGCCTGCTGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR TCA 90 bp | GGTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTGGCGCAGGGAGACGCTaGCGTCATCTACCACATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGAWCSPWSSSTSTDLSPGAGRR*RHLPHL Trigger: GAGATGTGGTAGATGACGTCAGCGTCTCCCTGCGCC...AGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR TCA 90 bp | GACCCAGCAGGCCTTGGGGAGTGGCATCCTCAGAAACGGAGGGTACAGGTCCTCTGGGGCAGAAATGCTTaGTTTCTGGGTACCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: DPAGLGEWHPQKRRVQVLWGRNA*FLGTTW Trigger: CCATGTGGTACCCAGAAATCAAGCATTTCTGCCCCA...GAGGACCTGTACCCTCCGTTTCTGAGGATGCCACTCCCCAAGGCCTGCTGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR GCA 90 bp | GGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGTACGTCAAAGCTGGCTaGCCGAAGCAGGAAGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GIQSTHVLRDCKQHLPLLYVKAG*PKQEVP Trigger: CGGGACTTCCTGCTTCGGGCAGCCAGCTTTGACGTA...CAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR GCA 90 bp | TTAGGAAATGGGAAGGGTCAACTGAGACCCAGTGTCAATCCCACGGGGGCTTCCGTGAGGGCAACCAAGTaGGGCAGGCAGAGGCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGNGKGQLRPSVNPTGASVRATK*GRQRRL Trigger: TAACCGCCTCTGCCTGCCGCACTTGGTTGCCCTCAC...GGAAGCCCCCGTGGGATTGACACTGGGTCTCAGTTGACCCTTCCCATTTCCTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | GGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGCAATGGCCCACACTGTaGGCACATGGGTGGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GIQSTHVLRDCKQHLPLLQWPTL*AHGWQA Trigger: TGCTTGCCACCCATGTGCCCACAGTGTGGGCCATTG...CAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | CCCACCCCTGGGGGTGTTATGCCAGACTTGTCCCACACTGGAGTTTCTCCTGCTTTTCAGGTACCAGACTaGCGGCCACCGGTGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTPGGVMPDLSHTGVSPAFQVPD*RPPVFL Trigger: GAGAAACACCGGTGGCCGCCAGTCTGGTACCTGAAA...AGCAGGAGAAACTCCAGTGTGGGACAAGTCTGGCATAACACCCCCAGGGGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| 3UTR CAA 72 bp | GGGGTGAACTGGCCTGGGTGGGGCATGGTGTTCTCCTaGGTCTTCCTCCACCTCCACAGATCTTTCTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GVNWPGWGMVFS*VFLHLHRSFSY Trigger: GTAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACCCAGGCCAGTTCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR TCA 90 bp | CTGCTGAGCACAGAACCCACCCTTCCTCCTCCTCTTCCTCCTCCTTCATCCATGGGTCTGGGCTGGAGGTaGACATGCCTGTATAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSTEPTLPPPLPPPSSMGLGWR*TCLYRG Trigger: ACCTCTATACAGGCATGTTCACCTCCAGCCCAGACC...CATGGATGAAGGAGGAGGAAGAGGAGGAGGAAGGGTGGGTTCTGTGCTCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR GCA 90 bp | CTGCTGAGCACAGAACCCACCCTTCCTCCTCCTCTTCCTCCTCCTTCATCCATGTGTGATTTCCAGAACTaGAGGTGGCGGCGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLSTEPTLPPPLPPPSSMCDFQN*RWRREM Trigger: CATCTCCCGCCGCCACCTGCAGTTCTGGAAATCACA...CATGGATGAAGGAGGAGGAAGAGGAGGAGGAAGGGTGGGTTCTGTGCTCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | GGTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTCTGTGGGCACATGGGTaGCAAGCAACTGGTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGAWCSPWSSSTSTDLSPLWAHG*QATGTG Trigger: CCCAGTACCAGTTGCTTGCCACCCATGTGCCCACAG...AGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | CTGCTGAGCACAGAACCCACCCTTCCTCCTCCTCTTCCTCCTCCTTCATCCATGTTCCCGACCCTTCTCTaGGGGGAGGATTTCATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSTEPTLPPPLPPPSSMFPTLL*GEDFIG Trigger: CCCAATGAAATCCTCCCCCCAGAGAAGGGTCGGGAA...CATGGATGAAGGAGGAGGAAGAGGAGGAGGAAGGGTGGGTTCTGTGCTCAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | CTGCTGAGCACAGAACCCACCCTTCCTCCTCCTCTTCCTCCTCCTTCATCCATGCACACGTCCTCTGCCTaGCAGGTACCCTGTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLSTEPTLPPPLPPPSSMHTSSA*QVPCSI Trigger: AATGGAACAGGGTACCTGCCAGGCAGAGGACGTGTG...CATGGATGAAGGAGGAGGAAGAGGAGGAGGAAGGGTGGGTTCTGTGCTCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | GGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGATCAGCAGGGGCTTATaGGCGCTGATGGTCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GIQSTHVLRDCKQHLPLLISRGL*ALMVPS Trigger: TGATGGGACCATCAGCGCCCATAAGCCCCTGCTGAT...CAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR TCA 90 bp | GGGGACCCCAGAACTTTCATGACCTACTCCCTCATGGGACTTCACCTCGTAAGTCCACCACCACGCACTTaGTGGTCTCTACGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDPRTFMTYSLMGLHLVSPPPRT*WSLRLA Trigger: GGCCAAACGTAGAGACCATCAAGTGCGTGGTGGTGG...ACTTACGAGGTGAAGTCCCATGAGGGAGTAGGTCATGAAAGTTCTGGGGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR TCA 90 bp | CCCACCCCTGGGGGTGTTATGCCAGACTTGTCCCACACTGGAGTTTCTCCTGCTCACATTGCGCAGATGTaGTTTCCAGAACTGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTPGGVMPDLSHTGVSPAHIAQM*FPELQV Trigger: CACCTGCAGTTCTGGAAATCACATCTGCGCAATGTG...AGCAGGAGAAACTCCAGTGTGGGACAAGTCTGGCATAACACCCCCAGGGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTACTAGCCTGTCCATCGGGGCTTATGGGCGCTaGTGGTCCCATCATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPWSSSTSTDLSPTSLSIGAYGR*WSHHPG Trigger: TCCTGGATGATGGGACCATCAGCGCCCATAAGCCCC...GATGGACAGGCTAGTAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR GCA 90 bp | CTGCTACCCACCACTAAGTCTACACTGCCTGCAGTCAGTCCTTACAGGATGCTGACAGCACACGTCCTCTaGCTGGCAGGTACCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLPTTKSTLPAVSPYRMLTAHVL*LAGTLF Trigger: GAACAGGGTACCTGCCAGGCAGAGGACGTGTGCTGT...CAGCATCCTGTAAGGACTGACTGCAGGCAGTGTAGACTTAGTGGTGGGTAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGGTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTGGTCAGAGGATCCTCTaGCATCTCTTCCTGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: GLGGAWCSPWSSSTSTDLGQRIL*HLFLDT Trigger: AGTATCCAGGAAGAGATGGCAGAGGATCCTCTGACC...AAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACCCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | CTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGGCTCACTCACAGCCCCACCCCGATGGTCTCTACGTTTaGCCTTTCATAATCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRDCKQHLPLLAHSQPHPDGLYV*PFIIHV Trigger: GACATGGATTATGAAAGGCCAAACGTAGAGACCATC...GGGGTGGGGCTGTGAGTGAGCCAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | CTGCTGAGCACAGAACCCACCCTTCCTCCTCCTCTTCCTCCTCCTTCATCCATGCGTTCTAGCACCTCCTaGCACACACGATACTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSTEPTLPPPLPPPSSMRSSTS*HTRYWS Trigger: TGACCAGTATCGTGTGTGCCAGGAGGTGCTAGAACG...CATGGATGAAGGAGGAGGAAGAGGAGGAGGAAGGGTGGGTTCTGTGCTCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTTTTGTCTCCCTGGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGCGCCGGTCTTTGTGGTaGTCTCCGAAGGTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCFCLPGIQSTHVLRDCKRRSLW*SPKVSQ Trigger: CTGGGACACCTTCGGAGACCACCACAAAGACCGGCG...CTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCCAGGGAGACAAAAGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CCA 90 bp | CTGCTACCCACCACTAAGTCTACACTGCCTGCAGTCAGTCCTTACAGGATGCTGCACCAGTCGGCCAACTaGTACGCGCAGTGGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPTTKSTLPAVSPYRMLHQSAN*YAQWNC Trigger: ACAGTTCCACTGCGCGTACCAGTTGGCCGACTGGTG...CAGCATCCTGTAAGGACTGACTGCAGGCAGTGTAGACTTAGTGGTGGGTAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTACTAGCCTGTCCATCCGGAAGGGCCCCGGCTaGATGGAGTTATCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPWSSSTSTDLSPTSLSIRKGPG*MELSIF Trigger: GAAGATGGATAACTCCATTCAGCCGGGGCCCTTCCG...GATGGACAGGCTAGTAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTACTAGCCTGTCCATCCTGTGTACAGGTACTTaGGAACAGCCCGGAAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPWSSSTSTDLSPTSLSILCTGT*EQPGRA Trigger: GGCCCTTCCGGGCTGTTCTCAAGTACCTGTACACAG...GATGGACAGGCTAGTAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR GCA 90 bp | CTGCTGAGCACAGAACCCACCCTTCCTCCTCCTCTTCCTCCTCCTTCATCCATGGCTCTGGGGCAGAAATaGTTGATTTCTGGGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLSTEPTLPPPLPPPSSMALGQK*LISGYH Trigger: GTGGTACCCAGAAATCAAGCATTTCTGCCCCAGAGC...CATGGATGAAGGAGGAGGAAGAGGAGGAGGAAGGGTGGGTTCTGTGCTCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR GCA 90 bp | GATGCCAGGCGGCTCAGCCCTGTAAATCACTTGGGAGACCCAATTCCCCTTGCTTGTCTCTGGGGAACTTaGGGCACACGTTGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: DARRLSPVNHLGDPIPLACLWGT*GTRCCS Trigger: ACTACAACAACGTGTGCCGCAAGTTCCCCAGAGACA...AGCAAGGGGAATTGGGTCTCCCAAGTGATTTACAGGGCTGAGCCGCCTGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | GTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTAGCAAGCAACTGGTACTaGGTGAGGGTGGCATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGHGVLLGLPPPPQIFLLASNWY*VRVALQ Trigger: CTGCAATGCCACCCTCACCCAGTACCAGTTGCTTGC...TAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | TCCTGCTTTTGTCTCCCTGGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGTGGGTGGCAAGCAACTaGTACTGGGTGAGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCFCLPGIQSTHVLRDCKWVASN*YWVRVA Trigger: TGCCACCCTCACCCAGTACCAGTTGCTTGCCACCCA...CTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCCAGGGAGACAAAAGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | GGGGACCCCAGAACTTTCATGACCTACTCCCTCATGGGACTTCACCTCGTAAGTCACACTGTGGGCACATaGGTGGCAAGCAACTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GDPRTFMTYSLMGLHLVSHTVGT*VASNWY Trigger: GTACCAGTTGCTTGCCACCCATGTGCCCACAGTGTG...ACTTACGAGGTGAAGTCCCATGAGGGAGTAGGTCATGAAAGTTCTGGGGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | GGTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTATGGTCTTGACATGGTaGAGGGAATTGGGGTTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GGAWCSPWSSSTSTDLSPMVLTW*RELGLA Trigger: CGCCAACCCCAATTCCCTCCACCATGTCAAGACCAT...AGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | GGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGCACATGGTCTTGACATaGTGGAGGGAATTGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GIQSTHVLRDCKQHLPLLHMVLT*WRELGL Trigger: CAACCCCAATTCCCTCCACCATGTCAAGACCATGTG...CAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | CTGCTACCCACCACTAAGTCTACACTGCCTGCAGTCAGTCCTTACAGGATGCTGACTGGGCCACCACACTaGTCTCGTAGTAAGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPTTKSTLPAVSPYRMLTGPPH*SRSKGS Trigger: GGATCCCTTACTACGAGACCAGTGTGGTGGCCCAGT...CAGCATCCTGTAAGGACTGACTGCAGGCAGTGTAGACTTAGTGGTGGGTAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | CCCACCCCTGGGGGTGTTATGCCAGACTTGTCCCACACTGGAGTTTCTCCTGCTTCTGCCATCTCTTCCTaGATACTCACAAAAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPGGVMPDLSHTGVSPASAISS*ILTKAR Trigger: CCGAGCTTTTGTGAGTATCCAGGAAGAGATGGCAGA...AGCAGGAGAAACTCCAGTGTGGGACAAGTCTGGCATAACACCCCCAGGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | GGTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTAGGGCCCCGGCTGAATaGAGTTATCCATCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GGAWCSPWSSSTSTDLSPRAPAE*SYPSSP Trigger: TGGTGAAGATGGATAACTCCATTCAGCCGGGGCCCT...AGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | GGTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTCATATCATCCAGGTCTaGGCTGGAGGTGAACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGAWCSPWSSSTSTDLSPHIIQV*AGGEHA Trigger: GGCATGTTCACCTCCAGCCCAGACCTGGATGATATG...AGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | GACCCAGCAGGCCTTGGGGAGTGGCATCCTCAGAAACGGAGGGTACAGGTCCTCACACGTTGTTGTAGTTaGTGCAGATATGGTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DPAGLGEWHPQKRRVQVLTRCCS*CRYGED Trigger: GTCTTCACCATATCTGCACCAACTACAACAACGTGT...GAGGACCTGTACCCTCCGTTTCTGAGGATGCCACTCCCCAAGGCCTGCTGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR TCA 90 bp | GGGGACCCCAGAACTTTCATGACCTACTCCCTCATGGGACTTCACCTCGTAAGTGGTACCACATGGTCTTaGCATGGTGGAGGGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: GDPRTFMTYSLMGLHLVSGTTWS*HGGGNW Trigger: CCAATTCCCTCCACCATGTCAAGACCATGTGGTACC...ACTTACGAGGTGAAGTCCCATGAGGGAGTAGGTCATGAAAGTTCTGGGGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR GCA 90 bp | GGGGACCCCAGAACTTTCATGACCTACTCCCTCATGGGACTTCACCTCGTAAGTGAGGCCGCTGCACATTaGGCAGATGTGATTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GDPRTFMTYSLMGLHLVSEAAAH*ADVISR Trigger: TCTGGAAATCACATCTGCGCAATGTGCAGCGGCCTC...ACTTACGAGGTGAAGTCCCATGAGGGAGTAGGTCATGAAAGTTCTGGGGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR GCA 90 bp | GGCCTGGGTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCACATCTGAAAAGGTaGCCTTTGCCAAACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGGAWCSPWSSSTSTDLSHLKR*PLPNTP Trigger: AGGAGTGTTTGGCAAAGGGCACCTTTTCAGATGTGA...AAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACCCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | CTGCTACCCACCACTAAGTCTACACTGCCTGCAGTCAGTCCTTACAGGATGCTGCATGGTGGAGGGAATTaGGGTTGGCGATGGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLPTTKSTLPAVSPYRMLHGGGN*GWRWRN Trigger: GTTTCTCCATCGCCAACCCCAATTCCCTCCACCATG...CAGCATCCTGTAAGGACTGACTGCAGGCAGTGTAGACTTAGTGGTGGGTAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | CTGCTACCCACCACTAAGTCTACACTGCCTGCAGTCAGTCCTTACAGGATGCTGCACATACGTCAAAGCTaGCTGCCCGAAGCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPTTKSTLPAVSPYRMLHIRQS*LPEAGS Trigger: ACTTCCTGCTTCGGGCAGCCAGCTTTGACGTATGTG...CAGCATCCTGTAAGGACTGACTGCAGGCAGTGTAGACTTAGTGGTGGGTAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR TCA 90 bp | TGGTCTTCCTCCACCTCCACAGATCTTTCTCCTACTAGCCTGTCCATCCTCATTAGCAGCTCGGCAATGTaGGCAATGTGCATGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WSSSTSTDLSPTSLSILISSSAM*AMCMRS Trigger: GGACCTCATGCACATTGCTCACATTGCCGAGCTGCT...AATGAGGATGGACAGGCTAGTAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR TCA 90 bp | TTAGGAAATGGGAAGGGTCAACTGAGACCCAGTGTCAATCCCACGGGGGCTTCCTCCCATCATCCAGGATaGAGGTCACATCTGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGNGKGQLRPSVNPTGASSHHPG*RSHLKR Trigger: CCTTTTCAGATGTGACCTTCATCCTGGATGATGGGA...GGAAGCCCCCGTGGGATTGACACTGGGTCTCAGTTGACCCTTCCCATTTCCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR GCA 90 bp | GGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGCTCTCATGCAGCTCTTaGTTGTGTATGGAAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: GIQSTHVLRDCKQHLPLLLSCSS*LCMETP Trigger: TGGTGTTTCCATACACAAGCAAGAGCTGCATGAGAG...CAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR GCA 90 bp | TCCTGCTTTTGTCTCCCTGGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGCCAGTCACTGTGTACTaGTCTGTGAGGGCAACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCFCLPGIQSTHVLRDCKPVTVY*SVRATK Trigger: CTTGGTTGCCCTCACAGAGCAGTACACAGTGACTGG...CTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCCAGGGAGACAAAAGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR GCA 90 bp | AGATGTAATGTGTGCGGGAAGGGTGAAGTAGAGAACCCACATTGTACTAAAGTGATGCGCACGCGCTCCTaGAGCACCAGGATGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: RCNVCGKGEVENPHCTKVMRTRS*STRMTS Trigger: GGATGTCATCCTGGTGCTGCAGGAGCGCGTGCGCAT...CACTTTAGTACAATGTGGGTTCTCTACTTCACCCTTCCCGCACACATTACATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR GCA 90 bp | GGTACAGGTCCTCCCCTGAAAGGCATTGGAGTGGTTGGTACTACTGACCCTTCACGCGCAGTGGAACTGTaGCAATTCCAAGAATACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GTGPPLKGIGVVGTTDPSRAVEL*QFQEYK Trigger: CTTGTATTCTTGGAATTGGCACAGTTCCACTGCGCG...TGAAGGGTCAGTAGTACCAACCACTCCAATGCCTTTCAGGGGAGGACCTGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | TCCTGCTTTTGTCTCCCTGGAATCCAGAGCACCCATGTACTAAGGGACTGCAAGCCATCCAGTCACAGCTaGAAATCAGCAGGGGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SCFCLPGIQSTHVLRDCKPSSHS*KSAGAY Trigger: ATAAGCCCCTGCTGATTTCCAGCTGTGACTGGATGG...CTTGCAGTCCCTTAGTACATGGGTGCTCTGGATTCCAGGGAGACAAAAGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR CAA 72 bp | CCCGAGTACAGGGGAAGCTTTCCTCCACTGGCTCTATaGTCAAGTCCAGAGAGAAAATATCCGAGCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PEYRGSFPPLAL*SSPERKYPSSE Trigger: CTCAGAGCTCGGATATTTTCTCTCTGGACTTGACAATAGAGCCAGTGGAGGAAAGCTTCCCCTGTACTCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR CAA 72 bp | TGCCAGACTTGTCCCACACTGGAGTTTCTCCTGCTTTaGTCTCCCTGGAATCCAGAGCACCCATGTACTAAG | + |
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Preference number: 4 (lower is better) Translates to: CQTCPTLEFLLL*SPWNPEHPCTK Trigger: CTTAGTACATGGGTGCTCTGGATTCCAGGGAGACAAAAGCAGGAGAAACTCCAGTGTGGGACAAGTCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR TCA 90 bp | GGTTGTGGGTTTGTGTTTTTACCCCCATCCTCTAAGACAACACTGAGTGACATGCCATCAGCCGGGATTTaGAGGTCAGAGGATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCGFVFLPPSSKTTLSDMPSAGI*RSEDPL Trigger: CAGAGGATCCTCTGACCTTCAAATCCCGGCTGATGG...CATGTCACTCAGTGTTGTCTTAGAGGATGGGGGTAAAAACACAAACCCACAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | CTGCTACCCACCACTAAGTCTACACTGCCTGCAGTCAGTCCTTACAGGATGCTGAATTGGGGTTGGCGATaGAGAAACACAAAACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPTTKSTLPAVSPYRMLNWGWR*RNTKPP Trigger: TGGTGGTTTTGTGTTTCTCCATCGCCAACCCCAATT...CAGCATCCTGTAAGGACTGACTGCAGGCAGTGTAGACTTAGTGGTGGGTAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | GGTTGTGGGTTTGTGTTTTTACCCCCATCCTCTAAGACAACACTGAGTGACATGTTGGTCCGGCGTACATaGAAGGCCTTGGTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GCGFVFLPPSSKTTLSDMLVRRT*KALVIS Trigger: GGAGATCACCAAGGCCTTCCATGTACGCCGGACCAA...CATGTCACTCAGTGTTGTCTTAGAGGATGGGGGTAAAAACACAAACCCACAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR TCA 90 bp | GGGGACCCCAGAACTTTCATGACCTACTCCCTCATGGGACTTCACCTCGTAAGTCCTCACTCAGGTCCATaGGGAATAAGTCATAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GDPRTFMTYSLMGLHLVSPHSGP*GISHRI Trigger: AATTCTATGACTTATTCCTCATGGACCTGAGTGAGG...ACTTACGAGGTGAAGTCCCATGAGGGAGTAGGTCATGAAAGTTCTGGGGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | GGTTGTGGGTTTGTGTTTTTACCCCCATCCTCTAAGACAACACTGAGTGACATGATGTCCACCATCATCTaGGTCGCCTCCATCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCGFVFLPPSSKTTLSDMMSTII*VASISP Trigger: TGGACTGATGGAGGCGACCCAGATGATGGTGGACAT...CATGTCACTCAGTGTTGTCTTAGAGGATGGGGGTAAAAACACAAACCCACAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CCA 90 bp | GGTACAGGTCCTCCCCTGAAAGGCATTGGAGTGGTTGGTACTACTGACCCTTCATTCTCAAAGTACTCCTaGTTTTCTGGAGACATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPPLKGIGVVGTTDPSFSKYS*FSGDIA Trigger: GGCTATGTCTCCAGAAAACCAGGAGTACTTTGAGAA...TGAAGGGTCAGTAGTACCAACCACTCCAATGCCTTTCAGGGGAGGACCTGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| 3UTR CAA 72 bp | AGCACATTGCCCCACGCACATCCCGTAGAGTCACCTTaGGAAGAGAAAAGTATCCTGCATCAAGGTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: STLPHAHPVESP*EEKSILHQGGK Trigger: TTTTCCACCTTGATGCAGGATACTTTTCTCTTCCAAAGGTGACTCTACGGGATGTGCGTGGGGCAATGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 90 bp | TGCCTGGCAGGTACCCTGTTCCATTACCCCGTAAGATCCCGTCACTaGTTGAAGCCCTTAGGCCAGCCGGACCAGAGCCGCCGGCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLAGTLFHYPVRSRH*LKPLGQPDQSRRPH Trigger: ATGAGGCCGGCGGCTCTGGTCCGGCTGGCCTAAGGGCTTCAACCAGTGACGGGATCTTACGGGGTAATGGAACAGGGTACCTGCCAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | GGGTCCACCTGCTGCACACCAGCTCTGACAGCTGTGGGGGTAGGGGTGGGTCCCGGGTACCACATGGTCTaGACATGGTGGAGGGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: GSTCCTPALTAVGVGVGPGYHMV*TWWREL Trigger: CAATTCCCTCCACCATGTCAAGACCATGTGGTACCC...GGGACCCACCCCTACCCCCACAGCTGTCAGAGCTGGTGTGCAGCAGGTGGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS TCA 90 bp | CTTTGTGGTGGTCTCCGAAGGTGTCCCAGAGGCGCAGGGAGACGCTaGCGTCATCTACCACATCTCGGGAGCGTTCTAGCACCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LCGGLRRCPRGAGRR*RHLPHLGSVLAPPG Trigger: GCCAGGAGGTGCTAGAACGCTCCCGAGATGTGGTAGATGACGTCAGCGTCTCCCTGCGCCTCTGGGACACCTTCGGAGACCACCACAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 90 bp | GACCAGAGCCGCCGGCCTCATCCACACTCTCACATACGTCAAAGCTaGCTGCCCGAAGCAGGAAGTCCCGCCCATGGTGGTGATGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: DQSRRPHPHSHIRQS*LPEAGSPAHGGDGD Trigger: ATCACCATCACCACCATGGGCGGGACTTCCTGCTTCGGGCAGCCAGCTTTGACGTATGTGAGAGTGTGGATGAGGCCGGCGGCTCTGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | CTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGGCTCACTCACAGCCCCACCCCAGAGGCCGCTGCACATaGCGCAGATGTGATTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRDCKQHLPLLAHSQPHPRGRCT*RRCDFQ Trigger: CTGGAAATCACATCTGCGCAATGTGCAGCGGCCTCT...GGGGTGGGGCTGTGAGTGAGCCAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS GCA 90 bp | AGAGCCGCCGGCCTCATCCACACTCTCACATACGTCAAAGCTGGCTaGCCGAAGCAGGAAGTCCCGCCCATGGTGGTGATGGTGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RAAGLIHTLTYVKAG*PKQEVPPMVVMVMM Trigger: CATCATCACCATCACCACCATGGGCGGGACTTCCTGCTTCGGGCAGCCAGCTTTGACGTATGTGAGAGTGTGGATGAGGCCGGCGGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | CTAAGGGACTGCAAGCAGCACCTCCCTCTCCTGGCTCACTCACAGCCCCACCCCGCAGCCCGAATGGCATaGTCAAAGACGTCCTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LRDCKQHLPLLAHSQPHPAARMA*SKTSLI Trigger: TATCAAGGACGTCTTTGACAATGCCATTCGGGCTGC...GGGGTGGGGCTGTGAGTGAGCCAGGAGAGGGAGGTGCTGCTTGCAGTCCCTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 90 bp | GTAGTAAGGGATCCCCAGCTCTTTGGCGACTTCCCGACCCTTCTCTaGGGGGAGGATTTCATTGGGCTTGATGGGCCTAGCCAGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVRDPQLFGDFPTLL*GEDFIGLDGPSQRS Trigger: AGACCTCTGGCTAGGCCCATCAAGCCCAATGAAATCCTCCCCCCAGAGAAGGGTCGGGAAGTCGCCAAAGAGCTGGGGATCCCTTACTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCTCCCCTGAAAGGCATTGGAGTGGTTGGTACTACTGACCCTTCACAGATGAGCCTAGTCTaGCCCACGGCGTTGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPPLKGIGVVGTTDPSQMSLV*PTALSP Trigger: GGGGGACAACGCCGTGGGCAAGACTAGGCTCATCTG...TGAAGGGTCAGTAGTACCAACCACTCCAATGCCTTTCAGGGGAGGACCTGTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS-3UTR CAA 90 bp | CAGACTTGTCCCACACTGGAGTTTCTCCTGCTTTTGTCTCCCTGGAATCCAGAGTGGGTGAGGGTGGCATaGCAGGCCCGGGCACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QTCPTLEFLLLLSPWNPEWVRVA*QARAQM Trigger: CATCTGTGCCCGGGCCTGCAATGCCACCCTCACCCA...CTCTGGATTCCAGGGAGACAAAAGCAGGAGAAACTCCAGTGTGGGACAAGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | CTGCTGAGCACAGAACCCACCCTTCCTCCTCCTCTTCCTCCTCCTTCATCCATGGCAAAACGCCGGTCTTaGTGGTGGTCTCCGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSTEPTLPPPLPPPSSMAKRRS*WWSPKV Trigger: CACCTTCGGAGACCACCACAAAGACCGGCGTTTTGC...CATGGATGAAGGAGGAGGAAGAGGAGGAGGAAGGGTGGGTTCTGTGCTCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | GGGGACCCCAGAACTTTCATGACCTACTCCCTCATGGGACTTCACCTCGTAAGTGGGATCCCCAGCTCTTaGGCGACTTCCCGACCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GDPRTFMTYSLMGLHLVSGIPSS*ATSRPF Trigger: GAAGGGTCGGGAAGTCGCCAAAGAGCTGGGGATCCC...ACTTACGAGGTGAAGTCCCATGAGGGAGTAGGTCATGAAAGTTCTGGGGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
||
| CDS GCA 90 bp | GGATACTCACAAAAGCTCGGCTCCAGGAAGACAGCACACGTCCTCTaGCTGGCAGGTACCCTGTTCCATTACCCCGTAAGATCCCGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GYSQKLGSRKTAHVL*LAGTLFHYPVRSRH Trigger: GTGACGGGATCTTACGGGGTAATGGAACAGGGTACCTGCCAGGCAGAGGACGTGTGCTGTCTTCCTGGAGCCGAGCTTTTGTGAGTATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCTCCCCTGAAAGGCATTGGAGTGGTTGGTACTACTGACCCTTCACCCACCACCACGCACTaGATGGTCTCTACGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPPLKGIGVVGTTDPSPTTTH*MVSTFG Trigger: GCCAAACGTAGAGACCATCAAGTGCGTGGTGGTGGG...TGAAGGGTCAGTAGTACCAACCACTCCAATGCCTTTCAGGGGAGGACCTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | GGGGACCCCAGAACTTTCATGACCTACTCCCTCATGGGACTTCACCTCGTAAGTCACTCCTTAACCCGGTaGGTCCGGCGTACATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: GDPRTFMTYSLMGLHLVSHSLTR*VRRTWK Trigger: CTTCCATGTACGCCGGACCAACCGGGTTAAGGAGTG...ACTTACGAGGTGAAGTCCCATGAGGGAGTAGGTCATGAAAGTTCTGGGGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS TCA 90 bp | GCCACCATCATTCGTAGATCAAAGACCTCTAGCAGCTCGGCAATGTaGGCAATGTGCATGAGGTCCCGCTCATTCTCACCTAGCTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: ATIIRRSKTSSSSAM*AMCMRSRSFSPSSP Trigger: AGGGGAGCTAGGTGAGAATGAGCGGGACCTCATGCACATTGCTCACATTGCCGAGCTGCTAGAGGTCTTTGATCTACGAATGATGGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS GCA 90 bp | CTTCACCACCACCATCAGCCGGGATTTGAAGGTCAGAGGATCCTCTaGCATCTCTTCCTGGATACTCACAAAAGCTCGGCTCCAGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LHHHHQPGFEGQRIL*HLFLDTHKSSAPGR Trigger: TCTTCCTGGAGCCGAGCTTTTGTGAGTATCCAGGAAGAGATGGCAGAGGATCCTCTGACCTTCAAATCCCGGCTGATGGTGGTGGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 90 bp | ATCAGCCGGGATTTGAAGGTCAGAGGATCCTCTGCCATCTCTTCCTaGATACTCACAAAAGCTCGGCTCCAGGAAGACAGCACACGTCCT | + |
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Preference number: 5 (lower is better) Translates to: ISRDLKVRGSSAISS*ILTKARLQEDSTRP Trigger: AGGACGTGTGCTGTCTTCCTGGAGCCGAGCTTTTGTGAGTATCCAGGAAGAGATGGCAGAGGATCCTCTGACCTTCAAATCCCGGCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 90 bp | AACATGGCAGCCATCCAGTCACAGCTGGAAATCAGCAGGGGCTTATaGGCGCTGATGGTCCCATCATCCAGGATGAAGGTCACATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: NMAAIQSQLEISRGL*ALMVPSSRMKVTSE Trigger: TTCAGATGTGACCTTCATCCTGGATGATGGGACCATCAGCGCCCATAAGCCCCTGCTGATTTCCAGCTGTGACTGGATGGCTGCCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | GGTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTCTGGGGCAGAAATGCTaGATTTCTGGGTACCACATG | + |
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Preference number: 5 (lower is better) Translates to: GGAWCSPWSSSTSTDLSPLGQKC*ISGYHM Trigger: CATGTGGTACCCAGAAATCAAGCATTTCTGCCCCAG...AGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | TGGTCTTCCTCCACCTCCACAGATCTTTCTCCTACTAGCCTGTCCATCCTCATTCCTGTGTACAGGTACTaGAGAACAGCCCGGAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: WSSSTSTDLSPTSLSILIPVYRY*RTARKG Trigger: GCCCTTCCGGGCTGTTCTCAAGTACCTGTACACAGG...AATGAGGATGGACAGGCTAGTAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | CTGCTGAGCACAGAACCCACCCTTCCTCCTCCTCTTCCTCCTCCTTCATCCATGATGAAGGCTTCGTTGTaGAGAATGTTGGCCACCATC | + |
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Preference number: 5 (lower is better) Translates to: LLSTEPTLPPPLPPPSSMMKASL*RMLATI Trigger: GATGGTGGCCAACATTCTCAACAACGAAGCCTTCAT...CATGGATGAAGGAGGAGGAAGAGGAGGAGGAAGGGTGGGTTCTGTGCTCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | GGTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTGCTCTCATGCAGCTCTaGCTTGTGTATGGAAACACC | + |
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Preference number: 5 (lower is better) Translates to: GGAWCSPWSSSTSTDLSPALMQL*LVYGNT Trigger: GGTGTTTCCATACACAAGCAAGAGCTGCATGAGAGC...AGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS TCA 90 bp | GTAGATCAAAGACCTCTAGCAGCTCGGCAATGTGAGCAATGTGCATaGGGTCCCGCTCATTCTCACCTAGCTCCCCTGTGTACAGGTACT | + |
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Preference number: 5 (lower is better) Translates to: VDQRPLAARQCEQCA*GPAHSHLAPLCTGT Trigger: AGTACCTGTACACAGGGGAGCTAGGTGAGAATGAGCGGGACCTCATGCACATTGCTCACATTGCCGAGCTGCTAGAGGTCTTTGATCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 90 bp | GCAGAGGCGGTTAGCCAAGACAATGAGCTTCATATCATCCAGGTCTaGGCTGGAGGTGAACATGCCTGTATAGAGGTACTCCAACACAGC | + |
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Preference number: 5 (lower is better) Translates to: AEAVSQDNELHIIQV*AGGEHACIEVLQHS Trigger: GCTGTGTTGGAGTACCTCTATACAGGCATGTTCACCTCCAGCCCAGACCTGGATGATATGAAGCTCATTGTCTTGGCTAACCGCCTCTGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | CAGACTTGTCCCACACTGGAGTTTCTCCTGCTTTTGTCTCCCTGGAATCCAGAGACATGGTGGAGGGAATaGGGGTTGGCGATGGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: QTCPTLEFLLLLSPWNPETWWRE*GLAMEK Trigger: TTTCTCCATCGCCAACCCCAATTCCCTCCACCATGT...CTCTGGATTCCAGGGAGACAAAAGCAGGAGAAACTCCAGTGTGGGACAAGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | GGTTGTGGGTTTGTGTTTTTACCCCCATCCTCTAAGACAACACTGAGTGACATGAGATCCCGTCACTGGTaGAAGCCCTTAGGCCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: GCGFVFLPPSSKTTLSDMRSRHW*KPLGQP Trigger: CGGCTGGCCTAAGGGCTTCAACCAGTGACGGGATCT...CATGTCACTCAGTGTTGTCTTAGAGGATGGGGGTAAAAACACAAACCCACAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 90 bp | AATTCCAAGAATACAAGGACATCCCCATCGATGTCCACCATCATCTaGGTCGCCTCCATCAGTCCAGTCACTGTGTACTGCTCTGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: NSKNTRTSPSMSTII*VASISPVTVYCSVR Trigger: CCTCACAGAGCAGTACACAGTGACTGGACTGATGGAGGCGACCCAGATGATGGTGGACATCGATGGGGATGTCCTTGTATTCTTGGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | TCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTACTAGCCTGTCCATCTGGAGGGAATTGGGGTaGGCGATGGAGAAACACAAA | + |
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Preference number: 5 (lower is better) Translates to: SPWSSSTSTDLSPTSLSIWRELG*AMEKHK Trigger: TTTGTGTTTCTCCATCGCCAACCCCAATTCCCTCCA...GATGGACAGGCTAGTAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | TGGTCTTCCTCCACCTCCACAGATCTTTCTCCTACTAGCCTGTCCATCCTCATTACCATCAGCCGGGATTaGAAGGTCAGAGGATCCTCT | + |
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Preference number: 5 (lower is better) Translates to: WSSSTSTDLSPTSLSILITISRD*KVRGSS Trigger: AGAGGATCCTCTGACCTTCAAATCCCGGCTGATGGT...AATGAGGATGGACAGGCTAGTAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | GGTACAGGTCCTCCCCTGAAAGGCATTGGAGTGGTTGGTACTACTGACCCTTCATTCATGAAGGCTTCGTaGTTGAGAATGTTGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: GTGPPLKGIGVVGTTDPSFMKAS*LRMLAT Trigger: GGTGGCCAACATTCTCAACAACGAAGCCTTCATGAA...TGAAGGGTCAGTAGTACCAACCACTCCAATGCCTTTCAGGGGAGGACCTGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | GTGGGGCATGGTGTTCTCCTTGGTCTTCCTCCACCTCCACAGATCTTTCTCCTATCATGCAGCTCTTGCTaGTGTATGGAAACACCACCT | + |
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Preference number: 5 (lower is better) Translates to: VGHGVLLGLPPPPQIFLLSCSSC*CMETPP Trigger: AGGTGGTGTTTCCATACACAAGCAAGAGCTGCATGA...TAGGAGAAAGATCTGTGGAGGTGGAGGAAGACCAAGGAGAACACCATGCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS-3UTR CAA 90 bp | CTGCTACCCACCACTAAGTCTACACTGCCTGCAGTCAGTCCTTACAGGATGCTGTCGTTGTTGAGAATGTaGGCCACCATCATTCGTAGA | + |
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Preference number: 5 (lower is better) Translates to: LLPTTKSTLPAVSPYRMLSLLRM*ATIIRR Trigger: TCTACGAATGATGGTGGCCAACATTCTCAACAACGA...CAGCATCCTGTAAGGACTGACTGCAGGCAGTGTAGACTTAGTGGTGGGTAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CAA 90 bp | GTGGGCACATGGGTGGCAAGCAACTGGTACTGGGTGAGGGTGGCATaGCAGGCCCGGGCACAGATGAGCCTAGTCTTGCCCACGGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: VGTWVASNWYWVRVA*QARAQMSLVLPTAL Trigger: CAACGCCGTGGGCAAGACTAGGCTCATCTGTGCCCGGGCCTGCAATGCCACCCTCACCCAGTACCAGTTGCTTGCCACCCATGTGCCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 72 bp | CGCCGGCCTCATCCACACTCTCACATACGTCAAAGCTaGCTGCCCGAAGCAGGAAGTCCCGCCCATGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: RRPHPHSHIRQS*LPEAGSPAHGG Trigger: ACCACCATGGGCGGGACTTCCTGCTTCGGGCAGCCAGCTTTGACGTATGTGAGAGTGTGGATGAGGCCGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CAA 72 bp | ACCCTGTTCCATTACCCCGTAAGATCCCGTCACTGGTaGAAGCCCTTAGGCCAGCCGGACCAGAGCCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: TLFHYPVRSRHW*KPLGQPDQSRR Trigger: CCGGCGGCTCTGGTCCGGCTGGCCTAAGGGCTTCAACCAGTGACGGGATCTTACGGGGTAATGGAACAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS TCA 72 bp | GGTCTCCGAAGGTGTCCCAGAGGCGCAGGGAGACGCTaGCGTCATCTACCACATCTCGGGAGCGTTCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: GLRRCPRGAGRR*RHLPHLGSVLA Trigger: TGCTAGAACGCTCCCGAGATGTGGTAGATGACGTCAGCGTCTCCCTGCGCCTCTGGGACACCTTCGGAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 72 bp | GGTACCCTGTTCCATTACCCCGTAAGATCCCGTCACTaGTTGAAGCCCTTAGGCCAGCCGGACCAGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GTLFHYPVRSRH*LKPLGQPDQSR Trigger: GCGGCTCTGGTCCGGCTGGCCTAAGGGCTTCAACCAGTGACGGGATCTTACGGGGTAATGGAACAGGGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS GCA 72 bp | GGCCTCATCCACACTCTCACATACGTCAAAGCTGGCTaGCCGAAGCAGGAAGTCCCGCCCATGGTGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: GLIHTLTYVKAG*PKQEVPPMVVM Trigger: CATCACCACCATGGGCGGGACTTCCTGCTTCGGGCAGCCAGCTTTGACGTATGTGAGAGTGTGGATGAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS TCA 72 bp | GCTCATTCTCACCTAGCTCCCCTGTGTACAGGTACTTaGGAACAGCCCGGAAGGGCCCCGGCTGAATGGAGT | + |
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Preference number: 6 (lower is better) Translates to: AHSHLAPLCTGT*EQPGRAPAEWS Trigger: ACTCCATTCAGCCGGGGCCCTTCCGGGCTGTTCTCAAGTACCTGTACACAGGGGAGCTAGGTGAGAATGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS GCA 72 bp | CCAGTCACTGTGTACTGCTCTGTGAGGGCAACCAAGTaGGGCAGGCAGAGGCGGTTAGCCAAGACAATGAGC | + |
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Preference number: 6 (lower is better) Translates to: PVTVYCSVRATK*GRQRRLAKTMS Trigger: GCTCATTGTCTTGGCTAACCGCCTCTGCCTGCCGCACTTGGTTGCCCTCACAGAGCAGTACACAGTGACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS GCA 72 bp | CAAAAGCTCGGCTCCAGGAAGACAGCACACGTCCTCTaGCTGGCAGGTACCCTGTTCCATTACCCCGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: QKLGSRKTAHVL*LAGTLFHYPVR Trigger: TCTTACGGGGTAATGGAACAGGGTACCTGCCAGGCAGAGGACGTGTGCTGTCTTCCTGGAGCCGAGCTTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 72 bp | GCCATCCAGTCACAGCTGGAAATCAGCAGGGGCTTATaGGCGCTGATGGTCCCATCATCCAGGATGAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: AIQSQLEISRGL*ALMVPSSRMKV Trigger: GACCTTCATCCTGGATGATGGGACCATCAGCGCCCATAAGCCCCTGCTGATTTCCAGCTGTGACTGGATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CAA 90 bp | AGCTGGCAGCCCACCAGAATGACAGGAGCTCTGGGGCAGAAATGCTaGATTTCTGGGTACCACATGGTCTTGACATGGTGGAGGGAATTG | + |
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Preference number: 6 (lower is better) Translates to: SWQPTRMTGALGQKC*ISGYHMVLTWWREL Trigger: CAATTCCCTCCACCATGTCAAGACCATGTGGTACCCAGAAATCAAGCATTTCTGCCCCAGAGCTCCTGTCATTCTGGTGGGCTGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 72 bp | AATACAAGGACATCCCCATCGATGTCCACCATCATCTaGGTCGCCTCCATCAGTCCAGTCACTGTGTACTGC | + |
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Preference number: 6 (lower is better) Translates to: NTRTSPSMSTII*VASISPVTVYC Trigger: GCAGTACACAGTGACTGGACTGATGGAGGCGACCCAGATGATGGTGGACATCGATGGGGATGTCCTTGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 72 bp | TGTCTCTGGGGAACTTGCGGCACACGTTGTTGTAGTTaGTGCAGATATGGTGAAGACACCAGTCGGCCAACT | + |
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Preference number: 6 (lower is better) Translates to: CLWGTCGTRCCS*CRYGEDTSRPT Trigger: AGTTGGCCGACTGGTGTCTTCACCATATCTGCACCAACTACAACAACGTGTGCCGCAAGTTCCCCAGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CAA 72 bp | TCTGGGTACCACATGGTCTTGACATGGTGGAGGGAATaGGGGTTGGCGATGGAGAAACACAAAACCACCACG | + |
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Preference number: 6 (lower is better) Translates to: SGYHMVLTWWRE*GLAMEKHKTTT Trigger: CGTGGTGGTTTTGTGTTTCTCCATCGCCAACCCCAATTCCCTCCACCATGTCAAGACCATGTGGTACCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 72 bp | GATTTGAAGGTCAGAGGATCCTCTGCCATCTCTTCCTaGATACTCACAAAAGCTCGGCTCCAGGAAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: DLKVRGSSAISS*ILTKARLQEDS Trigger: GCTGTCTTCCTGGAGCCGAGCTTTTGTGAGTATCCAGGAAGAGATGGCAGAGGATCCTCTGACCTTCAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS TCA 72 bp | ATTCGTAGATCAAAGACCTCTAGCAGCTCGGCAATGTaGGCAATGTGCATGAGGTCCCGCTCATTCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: IRRSKTSSSSAM*AMCMRSRSFSP Trigger: AGGTGAGAATGAGCGGGACCTCATGCACATTGCTCACATTGCCGAGCTGCTAGAGGTCTTTGATCTACGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS GCA 72 bp | ACATGCCTGTATAGAGGTACTCCAACACAGCTCTCATaGAGCTCTTGCTTGTGTATGGAAACACCACCTCCC | + |
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Preference number: 6 (lower is better) Translates to: TCLYRGTPTQLS*SSCLCMETPPP Trigger: GGGAGGTGGTGTTTCCATACACAAGCAAGAGCTGCATGAGAGCTGTGTTGGAGTACCTCTATACAGGCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 72 bp | CTCCAACACAGCTCTCATGCAGCTCTTGCTTGTGTATaGAAACACCACCTCCCTGGTAGAACTCTCCACAAA | + |
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Preference number: 6 (lower is better) Translates to: LQHSSHAALACV*KHHLPGRTLHK Trigger: TTTGTGGAGAGTTCTACCAGGGAGGTGGTGTTTCCATACACAAGCAAGAGCTGCATGAGAGCTGTGTTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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| CDS CCA 72 bp | GTTAGCCAAGACAATGAGCTTCATATCATCCAGGTCTaGGCTGGAGGTGAACATGCCTGTATAGAGGTACTC | + |
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Preference number: 6 (lower is better) Translates to: VSQDNELHIIQV*AGGEHACIEVL Trigger: GAGTACCTCTATACAGGCATGTTCACCTCCAGCCCAGACCTGGATGATATGAAGCTCATTGTCTTGGCTAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022665.4 |
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