Pregenerated sensors for RHOBTB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019944Ensembl transcript IDs: ENSMUST00000020101.12, ENSMUST00000067908.14, ENSMUST00000163760.2, ENSMUST00000164034.8, ENSMUST00000167384.8, ENSMUST00000168117.8
Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGGGCCCACCCGCTTGGAAATGGGGTTGACCCGCACCTCCCTGTaGATGCTGACAAACCCCTTGCTCCAGCCGGACAGGGCGTGTCCC | + |
|
Preference number: 1 (lower is better) Translates to: TGPTRLEMGLTRTSL*MLTNPLLQPDRACP Trigger: GGGACACGCCCTGTCCGGCTGGAGCAAGGGGTTTGTCAGCATGCACAGGGAGGTGCGGGTCAACCCCATTTCCAAGCGGGTGGGCCCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CCA 90 bp | GGTGAACCTCACGGTTGGCGCTTTCCACAAAGGAACCCCCGAACATaGCCGCCATCCATTCGCAGCTACAGATCAGCAGCGGCTTGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: GEPHGWRFPQRNPRT*PPSIRSYRSAAACG Trigger: CCCACAAGCCGCTGCTGATCTGTAGCTGCGAATGGATGGCGGCCATGTTCGGGGGTTCCTTTGTGGAAAGCGCCAACCGTGAGGTTCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR GCA 90 bp | CTCCTTTCCCTGCTTGGAGAAGGCAGGACCTGGCCCCTAGCTTTGTaGTTTCACAGGCTCTGTGGTGAGACCGAGTGGAGAAGCAGGTGG | + |
|
Preference number: 1 (lower is better) Translates to: LLSLLGEGRTWPLAL*FHRLCGETEWRSRW Trigger: CCACCTGCTTCTCCACTCGGTCTCACCACAGAGCCTGTGAAAGCACAAAGCTAGGGGCCAGGTCCTGCCTTCTCCAAGCAGGGAAAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR GCA 90 bp | GGTGACGGTCCCCTCTCTCCTCCTCAGGCGACAGCTGGGGACGAATaGCAGAAACACCACTTTCTCCTTGAATGGTGCTTGTTCAGCGCC | + |
|
Preference number: 1 (lower is better) Translates to: GDGPLSPPQATAGDE*QKHHFLLEWCLFSA Trigger: GGCGCTGAACAAGCACCATTCAAGGAGAAAGTGGTGTTTCTGGCATTCGTCCCCAGCTGTCGCCTGAGGAGGAGAGAGGGGACCGTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163760.2 |
||
| 3UTR TCA 90 bp | GCCCCGGTGTCCAGCACACGACATCCCGTGGCAGGTGTGGAGCTGTaGCTCTCTGATGATTGTGTGTGTGTGTGTGTGTGTGTGCACACA | + |
|
Preference number: 1 (lower is better) Translates to: APVSSTRHPVAGVEL*LSDDCVCVCVCVHT Trigger: TGTGTGCACACACACACACACACACACACAATCATCAGAGAGTCACAGCTCCACACCTGCCACGGGATGTCGTGTGCTGGACACCGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 90 bp | CAGAATGGGCCCCGGTGTCCAGCACACGACATCCCGTGGCAGGTGTaGAGCTGTGACTCTCTGATGATTGTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: QNGPRCPAHDIPWQV*SCDSLMIVCVCVCV Trigger: CACACACACACACACACACACAATCATCAGAGAGTCACAGCTCCACACCTGCCACGGGATGTCGTGTGCTGGACACCGGGGCCCATTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR TCA 90 bp | GGCCTCAGGTGTGAGGCCGAGGTGATTGACCTGAAGACAGTGGGATaGGCCTTTTCCCTTTCCCTTATCTCTGTTCAGGCCCTAGGACGG | + |
|
Preference number: 1 (lower is better) Translates to: GLRCEAEVIDLKTVG*AFSLSLISVQALGR Trigger: CCGTCCTAGGGCCTGAACAGAGATAAGGGAAAGGGAAAAGGCTCATCCCACTGTCTTCAGGTCAATCACCTCGGCCTCACACCTGAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 90 bp | TGGCCCCTAGCTTTGTGCTTTCACAGGCTCTGTGGTGAGACCGAGTaGAGAAGCAGGTGGTCTGCCTTGGCCTACTTTAGTGGTGACCTG | + |
|
Preference number: 1 (lower is better) Translates to: WPLALCFHRLCGETE*RSRWSALAYFSGDL Trigger: CAGGTCACCACTAAAGTAGGCCAAGGCAGACCACCTGCTTCTCCACTCGGTCTCACCACAGAGCCTGTGAAAGCACAAAGCTAGGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 90 bp | ACCTCTCAACAGAATGGGCCCCGGTGTCCAGCACACGACATCCCGTaGCAGGTGTGGAGCTGTGACTCTCTGATGATTGTGTGTGTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: TSQQNGPRCPAHDIP*QVWSCDSLMIVCVC Trigger: ACACACACACACAATCATCAGAGAGTCACAGCTCCACACCTGCCACGGGATGTCGTGTGCTGGACACCGGGGCCCATTCTGTTGAGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR GCA 90 bp | CTCACACCACTGACAGCGGCCTTGGTGAGCTCCTGGACAGCATGCTaGTCTACGAGAGCAACCAAGTGTGTCAGGCAAAATCTGTTTGCC | + |
|
Preference number: 1 (lower is better) Translates to: LTPLTAALVSSWTAC*STRATKCVRQNLFA Trigger: GGCAAACAGATTTTGCCTGACACACTTGGTTGCTCTCGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAGGCCGCTGTCAGTGGTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CCA 90 bp | CTTCCCCTGCGGCTCCCTCTCTGCCACAAGAGGGTGATGCCTTCCTaGGTCTTTCTAAGCTCTTGTATCTGGTATGTGGCCATGCCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: LPLRLPLCHKRVMPS*VFLSSCIWYVAMPE Trigger: TTCTGGCATGGCCACATACCAGATACAAGAGCTTAGAAAGACCCAGGAAGGCATCACCCTCTTGTGGCAGAGAGGGAGCCGCAGGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR GCA 90 bp | ATGCTCACACCACTGACAGCGGCCTTGGTGAGCTCCTGGACAGCATaGTGCTCTACGAGAGCAACCAAGTGTGTCAGGCAAAATCTGTTT | + |
|
Preference number: 1 (lower is better) Translates to: MLTPLTAALVSSWTA*CSTRATKCVRQNLF Trigger: AAACAGATTTTGCCTGACACACTTGGTTGCTCTCGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAGGCCGCTGTCAGTGGTGTGAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CCA 90 bp | TTGTGCTTTCACAGGCTCTGTGGTGAGACCGAGTGGAGAAGCAGGTaGTCTGCCTTGGCCTACTTTAGTGGTGACCTGAATTTTCCCTGG | + |
|
Preference number: 1 (lower is better) Translates to: LCFHRLCGETEWRSR*SALAYFSGDLNFPW Trigger: CCAGGGAAAATTCAGGTCACCACTAAAGTAGGCCAAGGCAGACCACCTGCTTCTCCACTCGGTCTCACCACAGAGCCTGTGAAAGCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 90 bp | GACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTaGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGA | + |
|
Preference number: 1 (lower is better) Translates to: DFRVSQLSFYVPAHW*QGLCFDPGGGKCTR Trigger: TCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR TCA 90 bp | ACAAAACGAACCATCGTGGTTAAAGGCGGATCAGTGTCAACCAAATaGACCAGCCACTTGGTTCCAGCAGCTGTGAAGAACACGAGAGGA | + |
|
Preference number: 1 (lower is better) Translates to: TKRTIVVKGGSVSTK*TSHLVPAAVKNTRG Trigger: TCCTCTCGTGTTCTTCACAGCTGCTGGAACCAAGTGGCTGGTTCATTTGGTTGACACTGATCCGCCTTTAACCACGATGGTTCGTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 90 bp | AAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTaGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACA | + |
|
Preference number: 1 (lower is better) Translates to: KDFRVSQLSFYVPAH*WQGLCFDPGGGKCT Trigger: TGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR TCA 90 bp | GATCAGTGTCAACCAAATGAACCAGCCACTTGGTTCCAGCAGCTGTaGAGAACACGAGAGGATATTATTGCTTTCGTCCCATGTTCATGT | + |
|
Preference number: 1 (lower is better) Translates to: DQCQPNEPATWFQQL*RTREDIIAFVPCSC Trigger: ACATGAACATGGGACGAAAGCAATAATATCCTCTCGTGTTCTTCACAGCTGCTGGAACCAAGTGGCTGGTTCATTTGGTTGACACTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR GCA 90 bp | AGCCACTTGGTTCCAGCAGCTGTGAAGAACACGAGAGGATATTATTaGTTTCGTCCCATGTTCATGTATGTGTCTGTTGTGTTTTGGCAA | + |
|
Preference number: 1 (lower is better) Translates to: SHLVPAAVKNTRGYY*FRPMFMYVSVVFWQ Trigger: TTGCCAAAACACAACAGACACATACATGAACATGGGACGAAAGCAATAATATCCTCTCGTGTTCTTCACAGCTGCTGGAACCAAGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 90 bp | TATTATTGCTTTCGTCCCATGTTCATGTATGTGTCTGTTGTGTTTTaGCAAGAGTACAAGCGGATGGAGCTTTGGTTGTTGAAGTTCAAC | + |
|
Preference number: 1 (lower is better) Translates to: YYCFRPMFMYVSVVF*QEYKRMELWLLKFN Trigger: GTTGAACTTCAACAACCAAAGCTCCATCCGCTTGTACTCTTGCCAAAACACAACAGACACATACATGAACATGGGACGAAAGCAATAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CAA 90 bp | GAAATGGGGTTGACCCGCACCTCCCTGTGCATGCTGACAAACCCCTaGCTCCAGCCGGACAGGGCGTGTCCCTCGGAACCCGAGGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: EMGLTRTSLCMLTNP*LQPDRACPSEPEAS Trigger: GGAAGCCTCGGGTTCCGAGGGACACGCCCTGTCCGGCTGGAGCAAGGGGTTTGTCAGCATGCACAGGGAGGTGCGGGTCAACCCCATTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CAA 90 bp | TCCAGCCTGACCACGGTCACTGGGCCCACCCGCTTGGAAATGGGGTaGACCCGCACCTCCCTGTGCATGCTGACAAACCCCTTGCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SSLTTVTGPTRLEMG*TRTSLCMLTNPLLQ Trigger: CTGGAGCAAGGGGTTTGTCAGCATGCACAGGGAGGTGCGGGTCAACCCCATTTCCAAGCGGGTGGGCCCAGTGACCGTGGTCAGGCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CAA 90 bp | TGCTCCTCGTCATGGAGAACGAAGAGGACGTCGGCGCACAGGGGGTaGTCCAGTAAACAGGCAGCATCGCTGGTCCCCGCAGACGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: CSSSWRTKRTSAHRG*SSKQAASLVPADGH Trigger: GTGTCCGTCTGCGGGGACCAGCGATGCTGCCTGTTTACTGGACAACCCCCTGTGCGCCGACGTCCTCTTCGTTCTCCATGACGAGGAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CAA 90 bp | TGCATCGATGGGTCCAGCCTGACCACGGTCACTGGGCCCACCCGCTaGGAAATGGGGTTGACCCGCACCTCCCTGTGCATGCTGACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: CIDGSSLTTVTGPTR*EMGLTRTSLCMLTN Trigger: GTTTGTCAGCATGCACAGGGAGGTGCGGGTCAACCCCATTTCCAAGCGGGTGGGCCCAGTGACCGTGGTCAGGCTGGACCCATCGATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTGCTTTCACAGGCTCTGTGGTGAGACCGAGTGGAGAAGCAGGTGGTCTGCCGTGGCCCTTAGCGGGTaGCGGTCCCCTCTCTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LCFHRLCGETEWRSRWSAVALSG*RSPLSS Trigger: GGAGGAGAGAGGGGACCGTCACCCGCTAAGGGCCAC...GGCAGACCACCTGCTTCTCCACTCGGTCTCACCACAGAGCCTGTGAAAGCACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR TCA 90 bp | TTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCGTGGCCCTTAGCGGGTaGCGGTCCCCTCTCTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LILVEVNAHEWKSQGPRPVALSG*RSPLSS Trigger: GGAGGAGAGAGGGGACCGTCACCCGCTAAGGGCCAC...GGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGTGGCCCTTAGCGGGTaGCGGTCCCCTCTCTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: EVNAHEWKSQGPRPNCADVALSG*RSPLSS Trigger: GGAGGAGAGAGGGGACCGTCACCCGCTAAGGGCCAC...ATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR-3UTR TCA 90 bp | CGGTTGGCGCTTTCCACAAAGGAACCCCCGAACATGGCCGCCATCCATTCGCAGAGGACCTCGGCCATCTaGGCCAGCCCCAGCAGATCT | + |
|
Preference number: 2 (lower is better) Translates to: RLALSTKEPPNMAAIHSQRTSAI*ASPSRS Trigger: AGATCTGCTGGGGCTGGCTCAGATGGCCGAGGTCCT...CTGCGAATGGATGGCGGCCATGTTCGGGGGTTCCTTTGTGGAAAGCGCCAACCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCCTGAAGACGCTCCTGGGTCAGCCTGAGGGGTCCTCTGGGGGCCCTCCTTCCTGTCGAACACGTCCTTaGTGCCAAACTGGTCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: GLKTLLGQPEGSSGGPPSCRTRP*CQTGQT Trigger: TGTTTGACCAGTTTGGCATCAAGGACGTGTTCGACA...GGAAGGAGGGCCCCCAGAGGACCCCTCAGGCTGACCCAGGAGCGTCTTCAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR TCA 90 bp | CGGTTGGCGCTTTCCACAAAGGAACCCCCGAACATGGCCGCCATCCATTCGCAGCCTCCCTGTGCATGCTaGCAAACCCCTTGCTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: RLALSTKEPPNMAAIHSQPPCAC*QTPCSS Trigger: GCTGGAGCAAGGGGTTTGTCAGCATGCACAGGGAGG...CTGCGAATGGATGGCGGCCATGTTCGGGGGTTCCTTTGTGGAAAGCGCCAACCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR TCA 90 bp | CGCCAGGTCCTCTTTCTCTCGTTCCCTCTTCACACGCTGGTAGTGGTCTTCCTCGCGGCTTGTGGGCGCTaGTGGCTCCGTCATCCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RQVLFLSFPLHTLVVVFLAACGR*WLRHPR Trigger: CCTTGGATGACGGAGCCATCAGCGCCCACAAGCCGC...GAGGAAGACCACTACCAGCGTGTGAAGAGGGAACGAGAGAAAGAGGACCTGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTGACCCGCACCTCCCTGTGCATGCTGACAAACCCCTTGCTCCAGCCGGACAGCGGTGCGCAAAGATGTaGTCCTCGTCATGGAGAACG | + |
|
Preference number: 2 (lower is better) Translates to: VDPHLPVHADKPLAPAGQRCAKM*SSSWRT Trigger: CGTTCTCCATGACGAGGAGCACATCTTTGCGCACCG...CTGTCCGGCTGGAGCAAGGGGTTTGTCAGCATGCACAGGGAGGTGCGGGTCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CAA 90 bp | TGGCTCCTTTCCCTGCTTGGAGAAGGCAGGACCTGGCCCCTAGCTTaGTGCTTTCACAGGCTCTGTGGTGAGACCGAGTGGAGAAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: WLLSLLGEGRTWPLA*CFHRLCGETEWRSR Trigger: CCTGCTTCTCCACTCGGTCTCACCACAGAGCCTGTGAAAGCACAAAGCTAGGGGCCAGGTCCTGCCTTCTCCAAGCAGGGAAAGGAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR TCA 90 bp | CTACCATCATCCTCAGATCAAACATCTCCAGGACCTCGGCCATCTGAGCCAGCCGCTTGGAAATGGGGTTaGCCCGCACCTCCCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LPSSSDQTSPGPRPSEPAAWKWG*PAPPCA Trigger: TGCACAGGGAGGTGCGGGTCAACCCCATTTCCAAGC...GGCTGGCTCAGATGGCCGAGGTCCTGGAGATGTTTGATCTGAGGATGATGGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAAAGCCAAACTCTCAGGCAGGTCCTGGCCTGAAGACGCTCCTGGGTCAGCCTGTCACCTCTCTTTATaGGCCTTGCTAAGGGGCGTC | + |
|
Preference number: 2 (lower is better) Translates to: CKAKLSGRSWPEDAPGSACHLSL*ALLRGV Trigger: GACGCCCCTTAGCAAGGCCCATAAAGAGAGGTGACA...GGCTGACCCAGGAGCGTCTTCAGGCCAGGACCTGCCTGAGAGTTTGGCTTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAAAGCCAAACTCTCAGGCAGGTCCTGGCCTGAAGACGCTCCTGGGTCAGCCACTGGTCAAACACGCTaGTCTCGTAGTACGGGATGC | + |
|
Preference number: 2 (lower is better) Translates to: CKAKLSGRSWPEDAPGSATGQTR*SRSTGC Trigger: GCATCCCGTACTACGAGACCAGCGTGTTTGACCAGT...GGCTGACCCAGGAGCGTCTTCAGGCCAGGACCTGCCTGAGAGTTTGGCTTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCTCCTCAGGCGACAGCTGGGGACGAATGCCAGAAACACCACTTTCTCCTTCCTGACCACGGTCACTaGGCCCACCCGCTTGGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SPPQATAGDECQKHHFLLPDHGH*AHPLGN Trigger: ATTTCCAAGCGGGTGGGCCCAGTGACCGTGGTCAGG...AAGGAGAAAGTGGTGTTTCTGGCATTCGTCCCCAGCTGTCGCCTGAGGAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CAA 90 bp | CTCAGGCGACAGCTGGGGACGAATGCCAGAAACACCACTTTCTCCTaGAATGGTGCTTGTTCAGCGCCAGGTCCTCTTTCTCTCGTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LRRQLGTNARNTTFS*NGACSAPGPLSLVP Trigger: GGGAACGAGAGAAAGAGGACCTGGCGCTGAACAAGCACCATTCAAGGAGAAAGTGGTGTTTCTGGCATTCGTCCCCAGCTGTCGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163760.2 ENSMUST00000168117.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCCGGGGTCAGAATTACCACATAATAGCACCATTCCCCACACTCTTAGGATTTGTGGCCCTTAGCGGGTaGCGGTCCCCTCTCTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: TRGQNYHIIAPFPTLLGFVALSG*RSPLSS Trigger: GGAGGAGAGAGGGGACCGTCACCCGCTAAGGGCCAC...AAATCCTAAGAGTGTGGGGAATGGTGCTATTATGTGGTAATTCTGACCCCGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR TCA 90 bp | ACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAGTGGCCCTTAGCGGGTaGCGGTCCCCTCTCTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: TQLCGWLRRLVFIVELSTVALSG*RSPLSS Trigger: GGAGGAGAGAGGGGACCGTCACCCGCTAAGGGCCAC...TGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGCTTTCACAGGCTCTGTGGTGAGACCGAGTGGAGAAGCAGGTGGTCTGCCCCTGGTGGAGGTAAATaGACACGAGTGGAAAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: LCFHRLCGETEWRSRWSAPGGGK*TRVEKP Trigger: TGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGG...GGCAGACCACCTGCTTCTCCACTCGGTCTCACCACAGAGCCTGTGAAAGCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR GCA 90 bp | ACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGATTCCTTTTATGTCCCTaGTCATTGGTGGCAGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: TRVEKPGPQTQLCGWLRRFLLCP*SLVAGL Trigger: AAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAA...TCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR CAA 90 bp | CACAGGCTCTGTGGTGAGACCGAGTGGAGAAGCAGGTGGTCTGCCTaGGCCTACTTTAGTGGTGACCTGAATTTTCCCTGGGAAGAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: HRLCGETEWRSRWSA*AYFSGDLNFPWEEL Trigger: TAACTCTTCCCAGGGAAAATTCAGGTCACCACTAAAGTAGGCCAAGGCAGACCACCTGCTTCTCCACTCGGTCTCACCACAGAGCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGTGAGCTCCTGGACAGCATGCTGCTCTACGAGAGCAACCAAGTGTGTCAGACACCACTTTCTCCTTaGATGGTGCTTGTTCAGCGC | + |
|
Preference number: 2 (lower is better) Translates to: LGELLDSMLLYESNQVCQTPLSP*MVLVQR Trigger: GCGCTGAACAAGCACCATTCAAGGAGAAAGTGGTGT...CTGACACACTTGGTTGCTCTCGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAATCTGTTTGCCAAGGCAATTAACTCCAGGGGGTCCAGGTCCAAGTTGGGTGCGGGAGATGAGGGCTaGTCGGATGGCATTGTCGAA | + |
|
Preference number: 2 (lower is better) Translates to: QNLFAKAINSRGSRSKLGAGDEG*SDGIVE Trigger: TTCGACAATGCCATCCGAGCAGCCCTCATCTCCCGC...ACCCAACTTGGACCTGGACCCCCTGGAGTTAATTGCCTTGGCAAACAGATTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CAA 90 bp | CATGCTGCTCTACGAGAGCAACCAAGTGTGTCAGGCAAAATCTGTTaGCCAAGGCAATTAACTCCAGGGGGTCCAGGTCCAAGTTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HAALREQPSVSGKIC*PRQLTPGGPGPSWV Trigger: CACCCAACTTGGACCTGGACCCCCTGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGACACACTTGGTTGCTCTCGTAGAGCAGCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTATCTGGTATGTGGCCATGCCAGAAACAAAACGCCTGCCTGTGGTCTACACAGCAGGTGGTCTGCCTTaGCCTACTTTAGTGGTGACC | + |
|
Preference number: 2 (lower is better) Translates to: CIWYVAMPETKRLPVVYTAGGLP*PTLVVT Trigger: GGTCACCACTAAAGTAGGCCAAGGCAGACCACCTGC...TGTGTAGACCACAGGCAGGCGTTTTGTTTCTGGCATGGCCACATACCAGATACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CAA 90 bp | TCTCTGCCACAAGAGGGTGATGCCTTCCTGGGTCTTTCTAAGCTCTaGTATCTGGTATGTGGCCATGCCAGAAACAAAACGCCTGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SLPQEGDAFLGLSKL*YLVCGHARNKTPAC Trigger: ACAGGCAGGCGTTTTGTTTCTGGCATGGCCACATACCAGATACAAGAGCTTAGAAAGACCCAGGAAGGCATCACCCTCTTGTGGCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR TCA 90 bp | ACCAAGTGTGTCAGGCAAAATCTGTTTGCCAAGGCAATTAACTCCAGGGGGTCCGGTAAATGTCACGTCTaGGAAGGTGCCCTTGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: TKCVRQNLFAKAINSRGSGKCHV*EGALAE Trigger: CTCAGCAAGGGCACCTTCTCAGACGTGACATTTACC...GGACCCCCTGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGACACACTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGATTTCTCCTTGAATGGTaGTTGTTCAGCGCCAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SFYVPAHWWQGLCFDPGGFLLEW*LFSARS Trigger: GGACCTGGCGCTGAACAAGCACCATTCAAGGAGAAA...TCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163760.2 |
||
| 3UTR-3UTR GCA 90 bp | CAACCAAGTGTGTCAGGCAAAATCTGTTTGCCAAGGCAATTAACTCCAGGGGGTCCCGAGGCTTCCATCTaGAAAGCCAAACTCTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: QPSVSGKICLPRQLTPGGPEASI*KAKLSG Trigger: GCCTGAGAGTTTGGCTTTGCAGATGGAAGCCTCGGG...ACCCCCTGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGACACACTTGGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGTATGTCCCTGCTCATTaGTGGCAGGGCTTGTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GLQSQSAFLLCPCSLVAGYVPAH*WQGLCF Trigger: AAAGCACAAGCCCTGCCACCAATGAGCAGGGACATA...CCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACCAAGTGTGTCAGGCAAAATCTGTTTGCCAAGGCAATTAACTCCAGGGGGTGGTGAACCTCACGGTTaGCGCTTTCCACAAAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: QPSVSGKICLPRQLTPGGGEPHG*RFPQRN Trigger: GTTCCTTTGTGGAAAGCGCCAACCGTGAGGTTCACC...ACCCCCTGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGACACACTTGGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTTCCTTTTATGTCCCTaGTCATTGGTGGCAGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: FRVSQLSFYVPAHWWQGLFLLCP*SLVAGL Trigger: AAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAA...CAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR CAA 90 bp | GAAAACAGAACCTCTAGGTGGCTATATGTTCCTTCTCCTCAAGTCTaGACGTGTACTCTTTCCTTCCACCCACCTTCTCTTTCCGTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: ENRTSRWLYVPSPQV*TCTLSFHPPSLSVS Trigger: GCTGACGGAAAGAGAAGGTGGGTGGAAGGAAAGAGTACACGTCAAGACTTGAGGAGAAGGAACATATAGCCACCTAGAGGTTCTGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR TCA 90 bp | CAAAATCTGTTTGCCAAGGCAATTAACTCCAGGGGGTCCAGGTCCAAGTTGGGTCACATGGTTTTCACATaGTTTAGGGAGTTGGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: QNLFAKAINSRGSRSKLGHMVFT*FRELGF Trigger: GAACCCCAACTCCCTAAATCATGTGAAAACCATGTG...ACCCAACTTGGACCTGGACCCCCTGGAGTTAATTGCCTTGGCAAACAGATTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACACCTGGTGGAGGTAAATaGACACGAGTGGAAAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: TQLCGWLRRLVFIVELSTPGGGK*TRVEKP Trigger: TGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGG...TGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTACCAAAAGGACATTCTaGTTGAAGGACTTCAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: QLSFYVPAHWWQGLCFDPTKRTF*LKDFRV Trigger: GACTCTGAAGTCCTTCAACCAGAATGTCCTTTTGGT...AGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000167384.8 |
||
| 3UTR CAA 90 bp | CAGCCACTTGGTTCCAGCAGCTGTGAAGAACACGAGAGGATATTATaGCTTTCGTCCCATGTTCATGTATGTGTCTGTTGTGTTTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: QPLGSSSCEEHERIL*LSSHVHVCVCCVLA Trigger: TGCCAAAACACAACAGACACATACATGAACATGGGACGAAAGCAATAATATCCTCTCGTGTTCTTCACAGCTGCTGGAACCAAGTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CAA 90 bp | GTATGTGTCTGTTGTGTTTTGGCAAGAGTACAAGCGGATGGAGCTTaGGTTGTTGAAGTTCAACTAGGCCTACTCACTGAAAACAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: VCVCCVLARVQADGA*VVEVQLGLLTENRT Trigger: GGTTCTGTTTTCAGTGAGTAGGCCTAGTTGAACTTCAACAACCAAAGCTCCATCCGCTTGTACTCTTGCCAAAACACAACAGACACATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR TCA 90 bp | CCCTTTACCTCCCAACGAAAGGATAACTCTGTAATTATGAGTGATGCTCAGTGGCTCCAATCTGGAATCTaGGACACGAAAGCTGGATTT | + |
|
Preference number: 2 (lower is better) Translates to: PFTSQRKDNSVIMSDAQWLQSGI*DTKAGF Trigger: AAATCCAGCTTTCGTGTCTCAGATTCCAGATTGGAG...CCACTGAGCATCACTCATAATTACAGAGTTATCCTTTCGTTGGGAGGTAAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGTGTTTTGGCAAGAGTACAAGCGGATGGAGCTTTGGTTGTTGAAGTTCAACTCTGTAATTATGAGTaGTGCTCAGTGGTCACGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CCVLARVQADGALVVEVQLCNYE*CSVVTW Trigger: CCACGTGACCACTGAGCATCACTCATAATTACAGAG...TTGAACTTCAACAACCAAAGCTCCATCCGCTTGTACTCTTGCCAAAACACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR GCA 90 bp | TATTGCTTTCGTCCCATGTTCATGTATGTGTCTGTTGTGTTTTGGCAAGAGTACCCTGGTGGAGGTAAATaGACACGAGTGGAAAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: YCFRPMFMYVSVVFWQEYPGGGK*TRVEKP Trigger: TGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGG...GTACTCTTGCCAAAACACAACAGACACATACATGAACATGGGACGAAAGCAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGTCTTCAGAAACTCCCTCCCCCAAACAAAAACAAACAAACAAACAAACAAGTCCCTGCTCATTGGTaGCAGGGCTTGTGCTTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: SCLQKLPPPNKNKQTNKQVPAHW*QGLCFD Trigger: ATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGAC...TTGTTTGTTTGTTTGTTTGTTTTTGTTTGGGGGAGGGAGTTTCTGAAGACAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR TCA 90 bp | TATTGCTTTCGTCCCATGTTCATGTATGTGTCTGTTGTGTTTTGGCAAGAGTACTTAGCATCAGTAAGGTaGCCTCTCAACAGAATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: YCFRPMFMYVSVVFWQEYLASVR*PLNRMG Trigger: GCCCATTCTGTTGAGAGGTCACCTTACTGATGCTAA...GTACTCTTGCCAAAACACAACAGACACATACATGAACATGGGACGAAAGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCTTCAGAAACTCCCTCCCCCAAACAAAAACAAACAAACAAACAAACAAACACTTTAGTGGTGACCTaGATTTTCCCTGGGAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LSSETPSPKQKQTNKQTNTLVVT*IFPGKS Trigger: ACTCTTCCCAGGGAAAATTCAGGTCACCACTAAAGT...GTTTGTTTGTTTGTTTGTTTGTTTTTGTTTGGGGGAGGGAGTTTCTGAAGACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR GCA 72 bp | ACCCGCTTGGAAATGGGGTTGACCCGCACCTCCCTGTaGATGCTGACAAACCCCTTGCTCCAGCCGGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: TRLEMGLTRTSL*MLTNPLLQPDR Trigger: CCTGTCCGGCTGGAGCAAGGGGTTTGTCAGCATGCACAGGGAGGTGCGGGTCAACCCCATTTCCAAGCGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR TCA 72 bp | CATCTGCAAAGCCAAACTCTCAGGCAGGTCCTGGCCTaGAGACGCTCCTGGGTCAGCCTGAGGGGTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HLQSQTLRQVLA*RRSWVSLRGPL Trigger: CAGAGGACCCCTCAGGCTGACCCAGGAGCGTCTTCAGGCCAGGACCTGCCTGAGAGTTTGGCTTTGCAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR GCA 72 bp | GACAGGGCGTGTCCCTCGGAACCCGAGGCTTCCATCTaGAAAGCCAAACTCTCAGGCAGGTCCTGGCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: DRACPSEPEASI*KAKLSGRSWPE Trigger: TTCAGGCCAGGACCTGCCTGAGAGTTTGGCTTTGCAGATGGAAGCCTCGGGTTCCGAGGGACACGCCCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR GCA 72 bp | TTTCCAGAACTGCAGGTGCCGGCGGGAGATGAGGGCTaGTCGGATGGCATTGTCGAACACGTCCTTGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: FPELQVPAGDEG*SDGIVEHVLDA Trigger: GGCATCAAGGACGTGTTCGACAATGCCATCCGAGCAGCCCTCATCTCCCGCCGGCACCTGCAGTTCTGGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CCA 72 bp | CAGAATGGGCCCCGGTGTCCAGCACACGACATCCCGTaGCAGGTGTGGAGCTGTGACTCTCTGATGATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QNGPRCPAHDIP*QVWSCDSLMIV Trigger: CACAATCATCAGAGAGTCACAGCTCCACACCTGCCACGGGATGTCGTGTGCTGGACACCGGGGCCCATTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 72 bp | CACGGTTGGCGCTTTCCACAAAGGAACCCCCGAACATaGCCGCCATCCATTCGCAGCTACAGATCAGCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: HGWRFPQRNPRT*PPSIRSYRSAA Trigger: CGCTGCTGATCTGTAGCTGCGAATGGATGGCGGCCATGTTCGGGGGTTCCTTTGTGGAAAGCGCCAACCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGCATTGGTGGCAGGGCTaGTGCTTTGATCCTGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: HTSGKARAPDPTVRMAKEHWWQG*CFDPGG Trigger: TCCACCAGGATCAAAGCACAAGCCCTGCCACCAATG...CTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR GCA 72 bp | CTGCTTGGAGAAGGCAGGACCTGGCCCCTAGCTTTGTaGTTTCACAGGCTCTGTGGTGAGACCGAGTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LLGEGRTWPLAL*FHRLCGETEWR Trigger: TCTCCACTCGGTCTCACCACAGAGCCTGTGAAAGCACAAAGCTAGGGGCCAGGTCCTGCCTTCTCCAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR GCA 72 bp | CCACTGACAGCGGCCTTGGTGAGCTCCTGGACAGCATaGTGCTCTACGAGAGCAACCAAGTGTGTCAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PLTAALVSSWTA*CSTRATKCVRQ Trigger: TTGCCTGACACACTTGGTTGCTCTCGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAGGCCGCTGTCAGTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CCA 72 bp | CCCCGGTGTCCAGCACACGACATCCCGTGGCAGGTGTaGAGCTGTGACTCTCTGATGATTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PRCPAHDIPWQV*SCDSLMIVCVC Trigger: ACACACACACACAATCATCAGAGAGTCACAGCTCCACACCTGCCACGGGATGTCGTGTGCTGGACACCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR GCA 72 bp | CCCCTCTCTCCTCCTCAGGCGACAGCTGGGGACGAATaGCAGAAACACCACTTTCTCCTTGAATGGTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PLSPPQATAGDE*QKHHFLLEWCL Trigger: CAAGCACCATTCAAGGAGAAAGTGGTGTTTCTGGCATTCGTCCCCAGCTGTCGCCTGAGGAGGAGAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163760.2 ENSMUST00000168117.8 |
||
| 3UTR CCA 72 bp | ATGCTCACACCACTGACAGCGGCCTTGGTGAGCTCCTaGACAGCATGCTGCTCTACGAGAGCAACCAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: MLTPLTAALVSS*TACCSTRATKC Trigger: ACACTTGGTTGCTCTCGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAGGCCGCTGTCAGTGGTGTGAGCAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CCA 72 bp | CACACAGGGGGCCAGCGGTGCCGCTCAAAGTACTCCTaGTTGTCTGCTGACTTGGATTTGATTTCCTTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: HTGGQRCRSKYS*LSADLDLISLR Trigger: CCGCAAGGAAATCAAATCCAAGTCAGCAGACAACCAGGAGTACTTTGAGCGGCACCGCTGGCCCCCTGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACAGCATGCTGCTCTACGAGAGCAACCAAGTGTGTCAGGCAAAATCTGTTTGATGCTGACAAACCCCTaGCTCCAGCCGGACAGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: GQHAALREQPSVSGKICLMLTNP*LQPDRA Trigger: CGCCCTGTCCGGCTGGAGCAAGGGGTTTGTCAGCAT...CAAACAGATTTTGCCTGACACACTTGGTTGCTCTCGTAGAGCAGCATGCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR GCA 72 bp | CTGACAGCGGCCTTGGTGAGCTCCTGGACAGCATGCTaGTCTACGAGAGCAACCAAGTGTGTCAGGCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LTAALVSSWTAC*STRATKCVRQN Trigger: ATTTTGCCTGACACACTTGGTTGCTCTCGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAGGCCGCTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CCA 72 bp | TGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTaGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: CALILVEVNAHE*KSQGPRPNCAD Trigger: ATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCTTATGTCCCTGCTCATaGGTGGCAGGGCTTGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CALILVEVNAHEWKSQGPLCPCS*VAGLVL Trigger: AAGCACAAGCCCTGCCACCAATGAGCAGGGACATAA...GGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR TCA 72 bp | TCCAGCACACGACATCCCGTGGCAGGTGTGGAGCTGTaGCTCTCTGATGATTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSTRHPVAGVEL*LSDDCVCVCVC Trigger: ACACACACACACACACACACAATCATCAGAGAGTCACAGCTCCACACCTGCCACGGGATGTCGTGTGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 72 bp | GCTTTGTGCTTTCACAGGCTCTGTGGTGAGACCGAGTaGAGAAGCAGGTGGTCTGCCTTGGCCTACTTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: ALCFHRLCGETE*RSRWSALAYFS Trigger: ACTAAAGTAGGCCAAGGCAGACCACCTGCTTCTCCACTCGGTCTCACCACAGAGCCTGTGAAAGCACAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 72 bp | GGGGACGAATGCCAGAAACACCACTTTCTCCTTGAATaGTGCTTGTTCAGCGCCAGGTCCTCTTTCTCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: GDECQKHHFLLE*CLFSARSSFSR Trigger: ACGAGAGAAAGAGGACCTGGCGCTGAACAAGCACCATTCAAGGAGAAAGTGGTGTTTCTGGCATTCGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163760.2 ENSMUST00000168117.8 |
||
| 3UTR-3UTR CAA 90 bp | CTACCATCATCCTCAGATCAAACATCTCCAGGACCTCGGCCATCTGAGCCAGCCTTGTCGAACACGTCCTaGATGCCAAACTGGTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LPSSSDQTSPGPRPSEPALSNTS*MPNWSN Trigger: GTTTGACCAGTTTGGCATCAAGGACGTGTTCGACAA...GGCTGGCTCAGATGGCCGAGGTCCTGGAGATGTTTGATCTGAGGATGATGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGTGAGCTCCTGGACAGCATGCTGCTCTACGAGAGCAACCAAGTGTGTCAGTCTGAGAAGGTGCCCTaGCTGAGACATTCTTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: LGELLDSMLLYESNQVCQSEKVP*LRHSLI Trigger: GATCAAAGAATGTCTCAGCAAGGGCACCTTCTCAGA...CTGACACACTTGGTTGCTCTCGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR GCA 72 bp | TCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTaGTTTGATCCTGGTGGAGGTAAATGCACACGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SFYVPAHWWQGL*FDPGGGKCTRV Trigger: CACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR CCA 72 bp | AGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTaGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RVSQLSFYVPAH*WQGLCFDPGGG Trigger: ACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR CCA 72 bp | ACATCTTGTTTATATTTGGGAGGTGAACCTCACGGTTaGCGCTTTCCACAAAGGAACCCCCGAACATGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: TSCLYLGGEPHG*RFPQRNPRTWP Trigger: CGGCCATGTTCGGGGGTTCCTTTGTGGAAAGCGCCAACCGTGAGGTTCACCTCCCAAATATAAACAAGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CCA 72 bp | CCAAGGCAATTAACTCCAGGGGGTCCAGGTCCAAGTTaGGTGACAACTGCTTGGTGTAGAGGTATTCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: PRQLTPGGPGPS*VTTAWCRGIPT Trigger: TGTTGGAATACCTCTACACCAAGCAGTTGTCACCCAACTTGGACCTGGACCCCCTGGAGTTAATTGCCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGTGGCCATGCCAGAAACAAAACGCCTGCCTGTGGTCTACACAGCTTTTCAATCTTACAAAGTGAAGTaGGCCTCAGGTGTGAGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: YVAMPETKRLPVVYTAFQSYKVK*ASGVRP Trigger: CGGCCTCACACCTGAGGCCAACTTCACTTTGTAAGA...TTGAAAAGCTGTGTAGACCACAGGCAGGCGTTTTGTTTCTGGCATGGCCACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR TCA 72 bp | ACCATCGTGGTTAAAGGCGGATCAGTGTCAACCAAATaGACCAGCCACTTGGTTCCAGCAGCTGTGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TIVVKGGSVSTK*TSHLVPAAVKN Trigger: GTTCTTCACAGCTGCTGGAACCAAGTGGCTGGTTCATTTGGTTGACACTGATCCGCCTTTAACCACGATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 72 bp | GTGATGCCTTCCTGGGTCTTTCTAAGCTCTTGTATCTaGTATGTGGCCATGCCAGAAACAAAACGCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VMPSWVFLSSCI*YVAMPETKRLP Trigger: AGGCAGGCGTTTTGTTTCTGGCATGGCCACATACCAGATACAAGAGCTTAGAAAGACCCAGGAAGGCATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR CAA 90 bp | ACCCGGGGTCAGAATTACCACATAATAGCACCATTCCCCACACTCTTAGGATTTTTATGTCCCTGCTCATaGGTGGCAGGGCTTGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TRGQNYHIIAPFPTLLGFLCPCS*VAGLVL Trigger: AAGCACAAGCCCTGCCACCAATGAGCAGGGACATAA...AAATCCTAAGAGTGTGGGGAATGGTGCTATTATGTGGTAATTCTGACCCCGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGTGTTTTGGCAAGAGTACAAGCGGATGGAGCTTTGGTTGTTGAAGTTCAACATTGGTGGCAGGGCTaGTGCTTTGATCCTGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CCVLARVQADGALVVEVQHWWQG*CFDPGG Trigger: TCCACCAGGATCAAAGCACAAGCCCTGCCACCAATG...TTGAACTTCAACAACCAAAGCTCCATCCGCTTGTACTCTTGCCAAAACACAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR CAA 90 bp | CAACCAAGTGTGTCAGGCAAAATCTGTTTGCCAAGGCAATTAACTCCAGGGGGTTTGCTGAGACATTCTTaGATCCGATTGGCTTTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: QPSVSGKICLPRQLTPGGLLRHS*IRLAFR Trigger: CCGGAAAGCCAATCGGATCAAAGAATGTCTCAGCAA...ACCCCCTGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGACACACTTGGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTAAAAGGACATTCTGGTaGAAGGACTTCAGAGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SQSAFLLCPCSLVAGLVLKRTFW*KDFRVS Trigger: ACTGACTCTGAAGTCCTTCAACCAGAATGTCCTTTT...AAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000167384.8 |
||
| 3UTR TCA 72 bp | TTTTATCTGCAGAGAGGCAATGACGTTGATGCCGCTTaGGAGCTCCCCTGCTTTGCAAGTTCTGTTCTAACA | + |
|
Preference number: 3 (lower is better) Translates to: FYLQRGNDVDAA*ELPCFASSVLT Trigger: TGTTAGAACAGAACTTGCAAAGCAGGGGAGCTCTCAAGCGGCATCAACGTCATTGCCTCTCTGCAGATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR TCA 72 bp | CCTCTAGGTGGCTATATGTTCCTTCTCCTCAAGTCTTaGCGTGTACTCTTTCCTTCCACCCACCTTCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PLGGYMFLLLKS*RVLFPSTHLLF Trigger: AAAGAGAAGGTGGGTGGAAGGAAAGAGTACACGTCAAGACTTGAGGAGAAGGAACATATAGCCACCTAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR GCA 72 bp | GTATCTGGTATGTGGCCATGCCAGAAACAAAACGCCTaGCTGTGGTCTACACAGCTTTTCAAATCCATATGG | + |
|
Preference number: 3 (lower is better) Translates to: VSGMWPCQKQNA*LWSTQLFKSIW Trigger: CCATATGGATTTGAAAAGCTGTGTAGACCACAGGCAGGCGTTTTGTTTCTGGCATGGCCACATACCAGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 72 bp | GGTATGTGGCCATGCCAGAAACAAAACGCCTGCCTGTaGTCTACACAGCTTTTCAAATCCATATGGCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: GMWPCQKQNACL*STQLFKSIWHL Trigger: CAAATGCCATATGGATTTGAAAAGCTGTGTAGACCACAGGCAGGCGTTTTGTTTCTGGCATGGCCACATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR TCA 72 bp | CAGCAAAACCACAGAGCACTTTTAAGTCACCAACCCTaGCATAGTTATCCAATGGTAGGACTCGAATGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: QQNHRALLSHQP*HSYPMVGLEWR Trigger: ACGCCATTCGAGTCCTACCATTGGATAACTATGTCAGGGTTGGTGACTTAAAAGTGCTCTGTGGTTTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR TCA 72 bp | CTAAAGCAGAGGACCACAACATCGGACCAAGAGCAGTaGAGCTTCTTTAAGTACAGATGTTATGTGGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LKQRTTTSDQEQ*SFFKYRCYVGE Trigger: TTCCCCCACATAACATCTGTACTTAAAGAAGCTTCACTGCTCTTGGTCCGATGTTGTGGTCCTCTGCTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR GCA 72 bp | TTTCCTTCCACCCACCTTCTCTTTCCGTCAGCCATTTaGCCTATTAACAAAGTTAAGGGGGAAGGCTTGATA | + |
|
Preference number: 3 (lower is better) Translates to: FPSTHLLFPSAI*PINKVKGEGLI Trigger: TATCAAGCCTTCCCCCTTAACTTTGTTAATAGGGCAAATGGCTGACGGAAAGAGAAGGTGGGTGGAAGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 72 bp | GCCTGCCTGTGGTCTACACAGCTTTTCAAATCCATATaGCATTTGGACTCAACTGACTCTTTCCTGTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ACLWSTQLFKSI*HLDSTDSFLSS Trigger: TGAAGACAGGAAAGAGTCAGTTGAGTCCAAATGCCATATGGATTTGAAAAGCTGTGTAGACCACAGGCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CCA 72 bp | CAACTAGGCCTACTCACTGAAAACAGAACCTCTAGGTaGCTATATGTTCCTTCTCCTCAAGTCTTGACGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QLGLLTENRTSR*LYVPSPQVLTC Trigger: ACACGTCAAGACTTGAGGAGAAGGAACATATAGCCACCTAGAGGTTCTGTTTTCAGTGAGTAGGCCTAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAGTGTGTCAGGCAAAATCTGTTTGCCAAGGCAATTAACTCCAGGGGGTCCTTCATAAAAGCCTCCTaGTTCATGATATTCTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: TKCVRQNLFAKAINSRGSFIKAS*FMIFST Trigger: GGTAGAGAATATCATGAACAAGGAGGCTTTTATGAA...GGACCCCCTGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGACACACTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR GCA 72 bp | GTTCCAGCAGCTGTGAAGAACACGAGAGGATATTATTaGTTTCGTCCCATGTTCATGTATGTGTCTGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VPAAVKNTRGYY*FRPMFMYVSVV Trigger: CACAACAGACACATACATGAACATGGGACGAAAGCAATAATATCCTCTCGTGTTCTTCACAGCTGCTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CAA 72 bp | GGGTCCAGCCTGACCACGGTCACTGGGCCCACCCGCTaGGAAATGGGGTTGACCCGCACCTCCCTGTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GSSLTTVTGPTR*EMGLTRTSLCM Trigger: CATGCACAGGGAGGTGCGGGTCAACCCCATTTCCAAGCGGGTGGGCCCAGTGACCGTGGTCAGGCTGGACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CAA 72 bp | TTGACCCGCACCTCCCTGTGCATGCTGACAAACCCCTaGCTCCAGCCGGACAGGGCGTGTCCCTCGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LTRTSLCMLTNP*LQPDRACPSEP Trigger: GGGTTCCGAGGGACACGCCCTGTCCGGCTGGAGCAAGGGGTTTGTCAGCATGCACAGGGAGGTGCGGGTCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGGACGTCGGCGCACAGGGGGTTGTCCAGTAAACAGGCAGCATCGCTGGTCAGGCCCGGGCACAGATaGGGCGCGTCTTCCCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: KRTSAHRGLSSKQAASLVRPGHR*GASSLR Trigger: CCGTAGGGAAGACGCGCCTCATCTGTGCCCGGGCCT...GACCAGCGATGCTGCCTGTTTACTGGACAACCCCCTGTGCGCCGACGTCCTCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| 3UTR CAA 72 bp | ACCACGGTCACTGGGCCCACCCGCTTGGAAATGGGGTaGACCCGCACCTCCCTGTGCATGCTGACAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTVTGPTRLEMG*TRTSLCMLTNP Trigger: GGGGTTTGTCAGCATGCACAGGGAGGTGCGGGTCAACCCCATTTCCAAGCGGGTGGGCCCAGTGACCGTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAGCTCCTGGGTCAGCCTaGGGGGTCCTCTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGRACALILVEVNAHEWKAPGSA*GVLWGP Trigger: GGGCCCCCAGAGGACCCCTCAGGCTGACCCAGGAGC...TTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGAGGCAGGTCCTGGCCTaGAGACGCTCCTGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGGGKCTRVEKPGPQTQLRQVLA*RRSWVS Trigger: GCTGACCCAGGAGCGTCTTCAGGCCAGGACCTGCCT...CAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | TTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCAGGCCCGGGCACAGATaGGGCGCGTCTTCCCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: FDPGGGKCTRVEKPGPQTRPGHR*GASSLR Trigger: CCGTAGGGAAGACGCGCCTCATCTGTGCCCGGGCCT...GGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | TTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTGCTCCTGGGTCAGCCTaGGGGGTCCTCTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FYVPAHWWQGLCFDPGGGAPGSA*GVLWGP Trigger: GGGCCCCCAGAGGACCCCTCAGGCTGACCCAGGAGC...ACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTCCTGGGTCAGCCTaGGGGGTCCTCTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RAPDPTVRMAKETGFYSRAPGSA*GVLWGP Trigger: GGGCCCCCAGAGGACCCCTCAGGCTGACCCAGGAGC...TCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTAGGCAGGTCCTGGCCTaGAGACGCTCCTGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVEVNAHEWKSQGPRPNCRQVLA*RRSWVS Trigger: GCTGACCCAGGAGCGTCTTCAGGCCAGGACCTGCCT...ACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | ATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACGCGGCTTGTGGGCGCTaGTGGCTCCGTCATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILVEVNAHEWKSQGPRPNAACGR*WLRHPR Trigger: CCTTGGATGACGGAGCCATCAGCGCCCACAAGCCGC...GTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGCAATGGCCCACACGGTaGGCACATGGGTGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VEVNAHEWKSQGPRPNCAQWPTR*AHGWPA Trigger: TGCTGGCCACCCATGTGCCCACCGTGTGGGCCATTG...CGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR CAA 72 bp | TCATGGAGAACGAAGAGGACGTCGGCGCACAGGGGGTaGTCCAGTAAACAGGCAGCATCGCTGGTCCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SWRTKRTSAHRG*SSKQAASLVPA Trigger: TGCGGGGACCAGCGATGCTGCCTGTTTACTGGACAACCCCCTGTGCGCCGACGTCCTCTTCGTTCTCCATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCTAGCTGGCAGCCAACCAGGACGACGGGCGTTCGAGGGCAAAAGTGCTTGCCACGACCACGCACTTaGTGGTCTCAACGTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSSWQPTRTTGVRGQKCLPRPRT*WSQRWV Trigger: GACCCAACGTTGAGACCATCAAGTGCGTGGTCGTGG...CAAGCACTTTTGCCCTCGAACGCCCGTCGTCCTGGTTGGCTGCCAGCTAGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGGCTCCTGGGTCAGCCTaGGGGGTCCTCTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FRVSQLSFYVPAHWWQGLAPGSA*GVLWGP Trigger: GGGCCCCCAGAGGACCCCTCAGGCTGACCCAGGAGC...CAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | TTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCAGGCAGGTCCTGGCCTaGAGACGCTCCTGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FDPGGGKCTRVEKPGPQTRQVLA*RRSWVS Trigger: GCTGACCCAGGAGCGTCTTCAGGCCAGGACCTGCCT...GGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGAGCTTGGAAATGGGGTTaGCCCGCACCTCCCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGKCTRVEKPGPQTQLCGAWKWG*PAPPCA Trigger: TGCACAGGGAGGTGCGGGTCAACCCCATTTCCAAGC...TCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR CAA 72 bp | TCCCTGCTTGGAGAAGGCAGGACCTGGCCCCTAGCTTaGTGCTTTCACAGGCTCTGTGGTGAGACCGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLGEGRTWPLA*CFHRLCGETEW Trigger: CCACTCGGTCTCACCACAGAGCCTGTGAAAGCACAAAGCTAGGGGCCAGGTCCTGCCTTCTCCAAGCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR TCA 90 bp | GTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGCCACGACCACGCACTTaGTGGTCTCAACGTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VEVNAHEWKSQGPRPNCAPRPRT*WSQRWV Trigger: GACCCAACGTTGAGACCATCAAGTGCGTGGTCGTGG...CGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | ATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACGCTTGGAAATGGGGTTaGCCCGCACCTCCCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILVEVNAHEWKSQGPRPNAWKWG*PAPPCA Trigger: TGCACAGGGAGGTGCGGGTCAACCCCATTTCCAAGC...GTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGACCCGCACCTCCCTGTaGATGCTGACAAACCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VEVNAHEWKSQGPRPNCATRTSL*MLTNPL Trigger: CAAGGGGTTTGTCAGCATGCACAGGGAGGTGCGGGT...CGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACAATGGCCCACACGGTaGGCACATGGGTGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALILVEVNAHEWKSQGPRQWPTR*AHGWPA Trigger: TGCTGGCCACCCATGTGCCCACCGTGTGGGCCATTG...TCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGCTTTCACAGGCTCTGTGGTGAGACCGAGTGGAGAAGCAGGTGGTCTGCCAGGAACCCCCGAACATaGCCGCCATCCATTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCFHRLCGETEWRSRWSARNPRT*PPSIRS Trigger: GCTGCGAATGGATGGCGGCCATGTTCGGGGGTTCCT...GGCAGACCACCTGCTTCTCCACTCGGTCTCACCACAGAGCCTGTGAAAGCACAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR TCA 90 bp | TTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTGCGGCTTGTGGGCGCTaGTGGCTCCGTCATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FYVPAHWWQGLCFDPGGGAACGR*WLRHPR Trigger: CCTTGGATGACGGAGCCATCAGCGCCCACAAGCCGC...ACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | CACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGCAGGTCCAAGTTGGGTaGCAACTGCTTGGTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTSGKARAPDPTVRMAKEQVQVG*QLLGVE Trigger: CTCTACACCAAGCAGTTGTCACCCAACTTGGACCTG...CTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATACCCGCACCTCCCTGTaGATGCTGACAAACCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVNAHEWKSQGPRPNCADTRTSL*MLTNPL Trigger: CAAGGGGTTTGTCAGCATGCACAGGGAGGTGCGGGT...ATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGACAATGGCCCACACGGTaGGCACATGGGTGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHWWQGLCFDPGGGKCTRQWPTR*AHGWPA Trigger: TGCTGGCCACCCATGTGCCCACCGTGTGGGCCATTG...TCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | TTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCCTGACCACGGTCACTaGGCCCACCCGCTTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FDPGGGKCTRVEKPGPQTPDHGH*AHPLGN Trigger: ATTTCCAAGCGGGTGGGCCCAGTGACCGTGGTCAGG...GGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | GTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAGTGGAGGTAGGCCCGGGCACAGATaGGGCGCGTCTTCCCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: VRMAKETGFYSRAVNSGGRPGHR*GASSLR Trigger: CCGTAGGGAAGACGCGCCTCATCTGTGCCCGGGCCT...ACCTCCACTGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | TTTCACAGGCTCTGTGGTGAGACCGAGTGGAGAAGCAGGTGGTCTGCCTTGGCCACGTGTCCCAAAGCCTaGGGGAGATGCTCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FHRLCGETEWRSRWSALATCPKA*GRCSLH Trigger: ATGAAGTGAGCATCTCCCTCAGGCTTTGGGACACGT...GGCCAAGGCAGACCACCTGCTTCTCCACTCGGTCTCACCACAGAGCCTGTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR TCA 90 bp | ACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGAACGTGTCCCAAAGCCTaGGGGAGATGCTCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TRVEKPGPQTQLCGWLRRTCPKA*GRCSLH Trigger: ATGAAGTGAGCATCTCCCTCAGGCTTTGGGACACGT...TCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGCTTCCCTTCCTCGGCTaGTCCAAGACTCTGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PFMSLLIGGRACALILVELPFLG*SKTLRP Trigger: CGGACGCAGAGTCTTGGATCAGCCGAGGAAGGGAAG...CTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGCTTGGAAATGGGGTTaGCCCGCACCTCCCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFMSLLIGGRACALILVEAWKWG*PAPPCA Trigger: TGCACAGGGAGGTGCGGGTCAACCCCATTTCCAAGC...CTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | TTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAGGACCTCGGCCATCTaGGCCAGCCCCAGCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: FYVPAHWWQGLCFDPGGGRTSAI*ASPSRS Trigger: AGATCTGCTGGGGCTGGCTCAGATGGCCGAGGTCCT...ACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | TCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCGGCTTGTGGGCGCTaGTGGCTCCGTCATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SESVSFPFMSLLIGGRACAACGR*WLRHPR Trigger: CCTTGGATGACGGAGCCATCAGCGCCCACAAGCCGC...ACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTACAGGGGGCCAGCGGTaGCGCTCAAAGTACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: APDPTVRMAKETGFYSRATGGQR*RSKYSW Trigger: CCAGGAGTACTTTGAGCGGCACCGCTGGCCCCCTGT...AGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAACAGGGGGCCAGCGGTaGCGCTCAAAGTACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLCFDPGGGKCTRVEKPTGGQR*RSKYSW Trigger: CCAGGAGTACTTTGAGCGGCACCGCTGGCCCCCTGT...TGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GAAACTGTGCCAGCTCCAAGTAGGAGAGAACTTCACCATCGATGCTCACACCACCAATGGCCCACACGGTaGGCACATGGGTGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETVPAPSRRELHHRCSHHQWPTR*AHGWPA Trigger: TGCTGGCCACCCATGTGCCCACCGTGTGGGCCATTG...GTGGTGTGAGCATCGATGGTGAAGTTCTCTCCTACTTGGAGCTGGCACAGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR CCA 90 bp | TTTCACAGGCTCTGTGGTGAGACCGAGTGGAGAAGCAGGTGGTCTGCCTTGGCCTGTCACCTCTCTTTATaGGCCTTGCTAAGGGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FHRLCGETEWRSRWSALACHLSL*ALLRGV Trigger: GACGCCCCTTAGCAAGGCCCATAAAGAGAGGTGACA...GGCCAAGGCAGACCACCTGCTTCTCCACTCGGTCTCACCACAGAGCCTGTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CCA 90 bp | GCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGACCTGACCACGGTCACTaGGCCCACCCGCTTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AHWWQGLCFDPGGGKCTRPDHGH*AHPLGN Trigger: ATTTCCAAGCGGGTGGGCCCAGTGACCGTGGTCAGG...TCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGCCTGACCACGGTCACTaGGCCCACCCGCTTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PFMSLLIGGRACALILVEPDHGH*AHPLGN Trigger: ATTTCCAAGCGGGTGGGCCCAGTGACCGTGGTCAGG...CTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCAAGGAACCCCCGAACATaGCCGCCATCCATTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLIGGRACALILVEVNARNPRT*PPSIRS Trigger: GCTGCGAATGGATGGCGGCCATGTTCGGGGGTTCCT...TGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | ACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGAGGTGAACCTCACGGTTaGCGCTTTCCACAAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TRVEKPGPQTQLCGWLRRGEPHG*RFPQRN Trigger: GTTCCTTTGTGGAAAGCGCCAACCGTGAGGTTCACC...TCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | ACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGAGGTCCAGGTCCAAGTTaGGTGACAACTGCTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRVEKPGPQTQLCGWLRRGPGPS*VTTAWC Trigger: ACACCAAGCAGTTGTCACCCAACTTGGACCTGGACC...TCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR CAA 72 bp | ACTTCACCATCGATGCTCACACCACTGACAGCGGCCTaGGTGAGCTCCTGGACAGCATGCTGCTCTACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSPSMLTPLTAA*VSSWTACCSTR Trigger: TCTCGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAGGCCGCTGTCAGTGGTGTGAGCATCGATGGTGAAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAAGGCCCGGGCACAGATaGGGCGCGTCTTCCCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: TQLCGWLRRLVFIVELSTRPGHR*GASSLR Trigger: CCGTAGGGAAGACGCGCCTCATCTGTGCCCGGGCCT...TGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTACTCACTGAAAACAGAACCTCTAGGTGGCTATATGTTCCTTCTCCTCAAAGGCCCGGGCACAGATaGGGCGCGTCTTCCCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLTENRTSRWLYVPSPQRPGHR*GASSLR Trigger: CCGTAGGGAAGACGCGCCTCATCTGTGCCCGGGCCT...TTGAGGAGAAGGAACATATAGCCACCTAGAGGTTCTGTTTTCAGTGAGTAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR TCA 90 bp | CACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGTGTCGAACACGTCCTTaGTGCCAAACTGGTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HTSGKARAPDPTVRMAKECRTRP*CQTGQT Trigger: TGTTTGACCAGTTTGGCATCAAGGACGTGTTCGACA...CTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | AGGGACCCGGGGTCAGAATTACCACATAATAGCACCATTCCCCACACTCTTAGGCTTCCCTTCCTCGGCTaGTCCAAGACTCTGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RDPGSELPHNSTIPHTLRLPFLG*SKTLRP Trigger: CGGACGCAGAGTCTTGGATCAGCCGAGGAAGGGAAG...CCTAAGAGTGTGGGGAATGGTGCTATTATGTGGTAATTCTGACCCCGGGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR TCA 90 bp | TTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTACCTCCCTGTGCATGCTaGCAAACCCCTTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FMSLLIGGRACALILVEVPPCAC*QTPCSS Trigger: GCTGGAGCAAGGGGTTTGTCAGCATGCACAGGGAGG...TACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGACCTCCCTGTGCATGCTaGCAAACCCCTTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAPDPTVRMAKETGFYSRPPCAC*QTPCSS Trigger: GCTGGAGCAAGGGGTTTGTCAGCATGCACAGGGAGG...TCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | ATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACGGTAAATGTCACGTCTaGGAAGGTGCCCTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILVEVNAHEWKSQGPRPNGKCHV*EGALAE Trigger: CTCAGCAAGGGCACCTTCTCAGACGTGACATTTACC...GTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATCAGGTCCAAGTTGGGTaGCAACTGCTTGGTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVNAHEWKSQGPRPNCADQVQVG*QLLGVE Trigger: CTCTACACCAAGCAGTTGTCACCCAACTTGGACCTG...ATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGCGGGAGATGAGGGCTaGTCGGATGGCATTGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFMSLLIGGRACALILVEAGDEG*SDGIVE Trigger: TTCGACAATGCCATCCGAGCAGCCCTCATCTCCCGC...CTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATGCGGGAGATGAGGGCTaGTCGGATGGCATTGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KARAPDPTVRMAKETGFYAGDEG*SDGIVE Trigger: TTCGACAATGCCATCCGAGCAGCCCTCATCTCCCGC...ATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | TTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCGGTGCGCAAAGATGTaGTCCTCGTCATGGAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: FDPGGGKCTRVEKPGPQTRCAKM*SSSWRT Trigger: CGTTCTCCATGACGAGGAGCACATCTTTGCGCACCG...GGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGACAGGGGGCCAGCGGTaGCGCTCAAAGTACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FRVSQLSFYVPAHWWQGLTGGQR*RSKYSW Trigger: CCAGGAGTACTTTGAGCGGCACCGCTGGCCCCCTGT...CAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTACAGGGGGCCAGCGGTaGCGCTCAAAGTACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLSFYVPAHWWQGLCFDPTGGQR*RSKYSW Trigger: CCAGGAGTACTTTGAGCGGCACCGCTGGCCCCCTGT...AGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTCACCTCTCTTTATaGGCCTTGCTAAGGGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILVEVNAHEWKSQGPRPNCHLSL*ALLRGV Trigger: GACGCCCCTTAGCAAGGCCCATAAAGAGAGGTGACA...GTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTTGGCTTTCCGGACGTaGAAGGCTTTCGTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKARAPDPTVRMAKETGFLAFRT*KAFVIS Trigger: GGAGATCACGAAAGCCTTCCACGTCCGGAAAGCCAA...AAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTAGGAACCCCCGAACATaGCCGCCATCCATTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: APDPTVRMAKETGFYSRARNPRT*PPSIRS Trigger: GCTGCGAATGGATGGCGGCCATGTTCGGGGGTTCCT...AGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACGGTCCAGGTCCAAGTTaGGTGACAACTGCTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILVEVNAHEWKSQGPRPNGPGPS*VTTAWC Trigger: ACACCAAGCAGTTGTCACCCAACTTGGACCTGGACC...GTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCAGCCTTGGTGAGCTCCTaGACAGCATGCTGCTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: SLLIGGRACALILVEVNAALVSS*TACCST Trigger: CGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAGGC...TGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAGCCTTGGTGAGCTCCTaGACAGCATGCTGCTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: GGRACALILVEVNAHEWKALVSS*TACCST Trigger: CGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAGGC...TTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGCCTTGGTGAGCTCCTaGACAGCATGCTGCTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: AHWWQGLCFDPGGGKCTRALVSS*TACCST Trigger: CGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAGGC...TCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGTCACCTCTCTTTATaGGCCTGCCATATGCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GGKCTRVEKPGPQTQLCGCHLSL*ACHMRT Trigger: GGTTCGCATATGGCAGGCCCATAAAGAGAGGTGACA...TCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGTGAGCTCCTGGACAGCATGCTGCTCTACGAGAGCAACCAAGTGTGTCAGACGTGTCCCAAAGCCTaGGGGAGATGCTCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGELLDSMLLYESNQVCQTCPKA*GRCSLH Trigger: ATGAAGTGAGCATCTCCCTCAGGCTTTGGGACACGT...CTGACACACTTGGTTGCTCTCGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGCCTCCCTGTGCATGCTaGCAAACCCCTTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRVSQLSFYVPAHWWQGLPPCAC*QTPCSS Trigger: GCTGGAGCAAGGGGTTTGTCAGCATGCACAGGGAGG...CAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | AAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGAGGACCTCGGCCATCTaGGCCAGCCCCAGCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KDFRVSQLSFYVPAHWWQRTSAI*ASPSRS Trigger: AGATCTGCTGGGGCTGGCTCAGATGGCCGAGGTCCT...CTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCGGTAAATGTCACGTCTaGGAAGGTGCCCTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CALILVEVNAHEWKSQGPGKCHV*EGALAE Trigger: CTCAGCAAGGGCACCTTCTCAGACGTGACATTTACC...GGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | TTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAGGTCCAAGTTGGGTaGCAACTGCTTGGTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FDPGGGKCTRVEKPGPQTQVQVG*QLLGVE Trigger: CTCTACACCAAGCAGTTGTCACCCAACTTGGACCTG...GGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTACACCACTTTCTCCTTaGATGGTGCTTGTTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GKARAPDPTVRMAKETGFTPLSP*MVLVQR Trigger: GCGCTGAACAAGCACCATTCAAGGAGAAAGTGGTGT...AAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | GCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGACCCGAGGCTTCCATCTaGAAAGCCAAACTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHWWQGLCFDPGGGKCTRPEASI*KAKLSG Trigger: GCCTGAGAGTTTGGCTTTGCAGATGGAAGCCTCGGG...TCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | CTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGCCCGAGGCTTCCATCTaGAAAGCCAAACTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIGGRACALILVEVNAHEPEASI*KAKLSG Trigger: GCCTGAGAGTTTGGCTTTGCAGATGGAAGCCTCGGG...CTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACCCGAGGCTTCCATCTaGAAAGCCAAACTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLIGGRACALILVEVNAPEASI*KAKLSG Trigger: GCCTGAGAGTTTGGCTTTGCAGATGGAAGCCTCGGG...TGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGATTGGCTTTCCGGACGTaGAAGGCTTTCGTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALILVEVNAHEWKSQGPRLAFRT*KAFVIS Trigger: GGAGATCACGAAAGCCTTCCACGTCCGGAAAGCCAA...TCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTCGCTCAAAGTACTCCTaGTTGTCTGCTGACTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VEKPGPQTQLCGWLRRLVRSKYS*LSADLD Trigger: ATCCAAGTCAGCAGACAACCAGGAGTACTTTGAGCG...AACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR CAA 72 bp | TGTGGTGAGACCGAGTGGAGAAGCAGGTGGTCTGCCTaGGCCTACTTTAGTGGTGACCTGAATTTTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGETEWRSRWSA*AYFSGDLNFPW Trigger: CCAGGGAAAATTCAGGTCACCACTAAAGTAGGCCAAGGCAGACCACCTGCTTCTCCACTCGGTCTCACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTCCACGACCACGCACTTaGTGGTCTCAACGTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQSAFLLCPCSLVAGLVLPRPRT*WSQRWV Trigger: GACCCAACGTTGAGACCATCAAGTGCGTGGTCGTGG...AAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | ACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACACATGGTTTTCACATaGTTTAGGGAGTTGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRVEKPGPQTQLCGWLRRHMVFT*FRELGF Trigger: GAACCCCAACTCCCTAAATCATGTGAAAACCATGTG...TCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 |
||
| CDS-3UTR TCA 90 bp | GACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACCCTCCCTGTGCATGCTaGCAAACCCCTTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPTVRMAKETGFYSRAVNPPCAC*QTPCSS Trigger: GCTGGAGCAAGGGGTTTGTCAGCATGCACAGGGAGG...GTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | AAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGCTTGGAAATGGGGTTaGCCCGCACCTCCCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KDFRVSQLSFYVPAHWWQAWKWG*PAPPCA Trigger: TGCACAGGGAGGTGCGGGTCAACCCCATTTCCAAGC...CTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | CCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAGTAGGACCTCGGCCATCTaGGCCAGCCCCAGCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: PTVRMAKETGFYSRAVNSRTSAI*ASPSRS Trigger: AGATCTGCTGGGGCTGGCTCAGATGGCCGAGGTCCT...ACTGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAGGTAAATGTCACGTCTaGGAAGGTGCCCTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGRACALILVEVNAHEWKGKCHV*EGALAE Trigger: CTCAGCAAGGGCACCTTCTCAGACGTGACATTTACC...TTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | CTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGCAGGTCCAAGTTGGGTaGCAACTGCTTGGTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIGGRACALILVEVNAHEQVQVG*QLLGVE Trigger: CTCTACACCAAGCAGTTGTCACCCAACTTGGACCTG...CTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCACCCGAGGCTTCCATCTaGAAAGCCAAACTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLCFDPGGGKCTRVEKPPEASI*KAKLSG Trigger: GCCTGAGAGTTTGGCTTTGCAGATGGAAGCCTCGGG...TGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAGTGGAACAGGGGGCCAGCGGTaGCGCTCAAAGTACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVRMAKETGFYSRAVNSGTGGQR*RSKYSW Trigger: CCAGGAGTACTTTGAGCGGCACCGCTGGCCCCCTGT...TCCACTGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGACTGGTCAAACACGCTaGTCTCGTAGTACGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PFMSLLIGGRACALILVETGQTR*SRSTGC Trigger: GCATCCCGTACTACGAGACCAGCGTGTTTGACCAGT...CTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGGCCTTGGTGAGCTCCTaGACAGCATGCTGCTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: FRVSQLSFYVPAHWWQGLALVSS*TACCST Trigger: CGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAGGC...CAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR CAA 72 bp | CAGCTGGGGACGAATGCCAGAAACACCACTTTCTCCTaGAATGGTGCTTGTTCAGCGCCAGGTCCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLGTNARNTTFS*NGACSAPGPLS Trigger: AGAAAGAGGACCTGGCGCTGAACAAGCACCATTCAAGGAGAAAGTGGTGTTTCTGGCATTCGTCCCCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163760.2 ENSMUST00000168117.8 |
||
| 3UTR CAA 72 bp | GTCACGTCTGAGAAGGTGCCCTTGCTGAGACATTCTTaGATCCGATTGGCTTTCCGGACGTGGAAGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTSEKVPLLRHS*IRLAFRTWKAF Trigger: GAAAGCCTTCCACGTCCGGAAAGCCAATCGGATCAAAGAATGTCTCAGCAAGGGCACCTTCTCAGACGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR TCA 90 bp | GACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACCCACGACCACGCACTTaGTGGTCTCAACGTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DPTVRMAKETGFYSRAVNPRPRT*WSQRWV Trigger: GACCCAACGTTGAGACCATCAAGTGCGTGGTCGTGG...GTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAACACCACTTTCTCCTTaGATGGTGCTTGTTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GGRACALILVEVNAHEWKTPLSP*MVLVQR Trigger: GCGCTGAACAAGCACCATTCAAGGAGAAAGTGGTGT...TTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAACACCACTTTCTCCTTaGATGGTGCTTGTTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KPGPQTQLCGWLRRLVFITPLSP*MVLVQR Trigger: GCGCTGAACAAGCACCATTCAAGGAGAAAGTGGTGT...TATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | GACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACACCCGCACCTCCCTGTaGATGCTGACAAACCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DPTVRMAKETGFYSRAVNTRTSL*MLTNPL Trigger: CAAGGGGTTTGTCAGCATGCACAGGGAGGTGCGGGT...GTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCATTTCTCCTTGAATGGTaGTTGTTCAGCGCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLIGGRACALILVEVNAFLLEW*LFSARS Trigger: GGACCTGGCGCTGAACAAGCACCATTCAAGGAGAAA...TGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | TTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAACTCCTGGTTGTCTGTaGCAGCTCCAAGTAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FMSLLIGGRACALILVEVTPGCL*QLQVGE Trigger: CTCTCCTACTTGGAGCTGGCACAGACAACCAGGAGT...TACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163760.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAGTGGACCTGACCACGGTCACTaGGCCCACCCGCTTGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVRMAKETGFYSRAVNSGPDHGH*AHPLGN Trigger: ATTTCCAAGCGGGTGGGCCCAGTGACCGTGGTCAGG...TCCACTGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAAGGAACCCCCGAACATaGCCGCCATCCATTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLCGWLRRLVFIVELSTRNPRT*PPSIRS Trigger: GCTGCGAATGGATGGCGGCCATGTTCGGGGGTTCCT...TGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACACCACGACCACGCACTTaGTGGTCTCAACGTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQLCGWLRRLVFIVELSTPRPRT*WSQRWV Trigger: GACCCAACGTTGAGACCATCAAGTGCGTGGTCGTGG...TGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTACGTGTCCCAAAGCCTaGGGGAGATGCTCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSFYVPAHWWQGLCFDPGTCPKA*GRCSLH Trigger: ATGAAGTGAGCATCTCCCTCAGGCTTTGGGACACGT...ACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATTGTCGAACACGTCCTTaGTGCCAAACTGGTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KARAPDPTVRMAKETGFYCRTRP*CQTGQT Trigger: TGTTTGACCAGTTTGGCATCAAGGACGTGTTCGACA...ATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTGGTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCACTTCCCTTCCTCGGCTaGTCCAAGACTCTGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILVEGLQSQSAFLLCPCSLPFLG*SKTLRP Trigger: CGGACGCAGAGTCTTGGATCAGCCGAGGAAGGGAAG...TGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAACCAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGTTTATATTTGGGAGGTaGACCTCACGGTTGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFMSLLIGGRACALILVEFIFGR*TSRLAL Trigger: AAGCGCCAACCGTGAGGTTCACCTCCCAAATATAAA...CTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTCAGGTCCAAGTTGGGTaGCAACTGCTTGGTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQSAFLLCPCSLVAGLVLQVQVG*QLLGVE Trigger: CTCTACACCAAGCAGTTGTCACCCAACTTGGACCTG...AAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | CAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAGTGGCGGGAGATGAGGGCTaGTCGGATGGCATTGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLCGWLRRLVFIVELSTVAGDEG*SDGIVE Trigger: TTCGACAATGCCATCCGAGCAGCCCTCATCTCCCGC...CACTGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGACTGGTCAAACACGCTaGTCTCGTAGTACGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FRVSQLSFYVPAHWWQGLTGQTR*SRSTGC Trigger: GCATCCCGTACTACGAGACCAGCGTGTTTGACCAGT...CAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTACTGGTCAAACACGCTaGTCTCGTAGTACGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LQSQSAFLLCPCSLVAGLTGQTR*SRSTGC Trigger: GCATCCCGTACTACGAGACCAGCGTGTTTGACCAGT...AAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGGTGAACCTCACGGTTaGCGCTTTCCACAAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSQSAFLLCPCSLVAGLGEPHG*RFPQRN Trigger: GTTCCTTTGTGGAAAGCGCCAACCGTGAGGTTCACC...AAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGGGTGAACCTCACGGTTaGCGCTTTCCACAAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FRVSQLSFYVPAHWWQGLGEPHG*RFPQRN Trigger: GTTCCTTTGTGGAAAGCGCCAACCGTGAGGTTCACC...CAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGGTCCAGGTCCAAGTTaGGTGACAACTGCTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSQSAFLLCPCSLVAGLGPGPS*VTTAWC Trigger: ACACCAAGCAGTTGTCACCCAACTTGGACCTGGACC...AAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTCGCTCAAAGTACTCCTaGTTGTCTGTGCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSFYVPAHWWQGLCFDPGRSKYS*LSVPAP Trigger: TGGAGCTGGCACAGACAACCAGGAGTACTTTGAGCG...ACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163760.2 |
||
| 3UTR CAA 72 bp | CTACGAGAGCAACCAAGTGTGTCAGGCAAAATCTGTTaGCCAAGGCAATTAACTCCAGGGGGTCCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LREQPSVSGKIC*PRQLTPGGPGP Trigger: TGGACCTGGACCCCCTGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGACACACTTGGTTGCTCTCGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR TCA 90 bp | GCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGACACATGGTTTTCACATaGTTTAGGGAGTTGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AHWWQGLCFDPGGGKCTRHMVFT*FRELGF Trigger: GAACCCCAACTCCCTAAATCATGTGAAAACCATGTG...TCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGACACCACTTTCTCCTTaGATGGTGCTTGTTCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FPFMSLLIGGRACALILVTPLSP*MVLVQR Trigger: GCGCTGAACAAGCACCATTCAAGGAGAAAGTGGTGT...CACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGTTTCTCCTTGAATGGTaGTTGTTCAGCGCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPFMSLLIGGRACALILVFLLEW*LFSARS Trigger: GGACCTGGCGCTGAACAAGCACCATTCAAGGAGAAA...CACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTTTTCTCCTTGAATGGTaGTTGTTCAGCGCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSFYVPAHWWQGLCFDPGFLLEW*LFSARS Trigger: GGACCTGGCGCTGAACAAGCACCATTCAAGGAGAAA...ACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | AACAACAACAACAACAACAACTTGTCTTACAAAGTGAAGTTGGCCTCAGGTGTGCAATGGCCCACACGGTaGGCACATGGGTGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NNNNNNNLSYKVKLASGVQWPTR*AHGWPA Trigger: TGCTGGCCACCCATGTGCCCACCGTGTGGGCCATTG...CACACCTGAGGCCAACTTCACTTTGTAAGACAAGTTGTTGTTGTTGTTGTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CCA 90 bp | GAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCATGTCACCTCTCTTTATaGGCCTTGCTAAGGGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGLQSQSAFLLCPCSLVACHLSL*ALLRGV Trigger: GACGCCCCTTAGCAAGGCCCATAAAGAGAGGTGACA...TGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAACTGGTCAAACACGCTaGTCTCGTAGTACGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: EGLQSQSAFLLCPCSLVATGQTR*SRSTGC Trigger: GCATCCCGTACTACGAGACCAGCGTGTTTGACCAGT...TGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATGCTTTCGTGATCTCCTaGTTCATAAAAGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KARAPDPTVRMAKETGFYAFVIS*FIKASL Trigger: CAAGGAGGCTTTTATGAACCAGGAGATCACGAAAGC...ATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGTGGGTGACAACTGCTTaGTGTAGAGGTATTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GLCFDPGGGKCTRVEKPGWVTTA*CRGIPT Trigger: TGTTGGAATACCTCTACACCAAGCAGTTGTCACCCA...CCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACGGTCCAGGTCCAAGTTaGGTGACAACTGCTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DPTVRMAKETGFYSRAVNGPGPS*VTTAWC Trigger: ACACCAAGCAGTTGTCACCCAACTTGGACCTGGACC...GTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGCGCTCAAAGTACTCCTaGTTGTCTGCTGACTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PQTQLCGWLRRLVFIVELRSKYS*LSADLD Trigger: ATCCAAGTCAGCAGACAACCAGGAGTACTTTGAGCG...CAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR CAA 72 bp | TTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTaGATCCTGGTGGAGGTAAATGCACACGAGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FMSLLIGGRACA*ILVEVNAHEWK Trigger: TTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTTCAGAAACTCCCTCCCCCAAACAAAAACAAACAAACAAACAAACAAACAGGACCTCGGCCATCTaGGCCAGCCCCAGCAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSETPSPKQKQTNKQTNRTSAI*ASPSRS Trigger: AGATCTGCTGGGGCTGGCTCAGATGGCCGAGGTCCT...GTTTGTTTGTTTGTTTGTTTGTTTTTGTTTGGGGGAGGGAGTTTCTGAAGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR TCA 90 bp | GTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGGTAAATGTCACGTCTaGGAAGGTGCCCTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VEGLQSQSAFLLCPCSLVGKCHV*EGALAE Trigger: CTCAGCAAGGGCACCTTCTCAGACGTGACATTTACC...CACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGCTTTCGTGATCTCCTaGTTCATAAAAGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGLCFDPGGGKCTRVEKPAFVIS*FIKASL Trigger: CAAGGAGGCTTTTATGAACCAGGAGATCACGAAAGC...TGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTGCTTTCGTGATCTCCTaGTTCATAAAAGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FYVPAHWWQGLCFDPGGGAFVIS*FIKASL Trigger: CAAGGAGGCTTTTATGAACCAGGAGATCACGAAAGC...ACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTACTCACTGAAAACAGAACCTCTAGGTGGCTATATGTTCCTTCTCCTCAAGGTGAACCTCACGGTTaGCGCTTTCCACAAAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLLTENRTSRWLYVPSPQGEPHG*RFPQRN Trigger: GTTCCTTTGTGGAAAGCGCCAACCGTGAGGTTCACC...TTGAGGAGAAGGAACATATAGCCACCTAGAGGTTCTGTTTTCAGTGAGTAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CCA 90 bp | TTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTTGGGTGACAACTGCTTaGTGTAGAGGTATTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: FYVPAHWWQGLCFDPGGGWVTTA*CRGIPT Trigger: TGTTGGAATACCTCTACACCAAGCAGTTGTCACCCA...ACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTCGCTCAAAGTACTCCTaGTTGTCTGCTGACTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SESVSFPFMSLLIGGRACRSKYS*LSADLD Trigger: ATCCAAGTCAGCAGACAACCAGGAGTACTTTGAGCG...ACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR CAA 72 bp | CAAGAGGGTGATGCCTTCCTGGGTCTTTCTAAGCTCTaGTATCTGGTATGTGGCCATGCCAGAAACAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: QEGDAFLGLSKL*YLVCGHARNKT Trigger: CGTTTTGTTTCTGGCATGGCCACATACCAGATACAAGAGCTTAGAAAGACCCAGGAAGGCATCACCCTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CAA 72 bp | TCATCCAAGGTAAATGTCACGTCTGAGAAGGTGCCCTaGCTGAGACATTCTTTGATCCGATTGGCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKVNVTSEKVP*LRHSLIRLAFR Trigger: CCGGAAAGCCAATCGGATCAAAGAATGTCTCAGCAAGGGCACCTTCTCAGACGTGACATTTACCTTGGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGTCTTCAGAAACTCCCTCCCCCAAACAAAAACAAACAAACAAACAAACAACTTCCCTTCCTCGGCTaGTCCAAGACTCTGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SCLQKLPPPNKNKQTNKQLPFLG*SKTLRP Trigger: CGGACGCAGAGTCTTGGATCAGCCGAGGAAGGGAAG...TTGTTTGTTTGTTTGTTTGTTTTTGTTTGGGGGAGGGAGTTTCTGAAGACAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR TCA 90 bp | TTTTCTTTGTATCAAAAGGAACAAAGTAACGGACTGAAGTGTAGTAGCTTCCTAAGGCAGGTCCTGGCCTaGAGACGCTCCTGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLYQKEQSNGLKCSSFLRQVLA*RRSWVS Trigger: GCTGACCCAGGAGCGTCTTCAGGCCAGGACCTGCCT...TAGGAAGCTACTACACTTCAGTCCGTTACTTTGTTCCTTTTGATACAAAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAAAGCCTCCTTGTTCATaGTATTCTCTACCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RAPDPTVRMAKETGFYSRKPPCS*YSLPSS Trigger: GGATGATGGTAGAGAATATCATGAACAAGGAGGCTT...TCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | AAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGTTTATATTTGGGAGGTaGACCTCACGGTTGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KDFRVSQLSFYVPAHWWQFIFGR*TSRLAL Trigger: AAGCGCCAACCGTGAGGTTCACCTCCCAAATATAAA...CTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | TGGTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTTTCTCCTTGAATGGTaGTTGTTCAGCGCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WLKDFRVSQLSFYVPAHWFLLEW*LFSARS Trigger: GGACCTGGCGCTGAACAAGCACCATTCAAGGAGAAA...CCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCATCTTGTTTATATTTaGGAGGTGAACCTCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCFDPGGGKCTRVEKPGPHLVYI*EVNLTV Trigger: AACCGTGAGGTTCACCTCCCAAATATAAACAAGATG...GGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGCATCTTGTTTATATTTaGGAGGTGAACCTCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PFMSLLIGGRACALILVEHLVYI*EVNLTV Trigger: AACCGTGAGGTTCACCTCCCAAATATAAACAAGATG...CTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTTGGGTGACAACTGCTTaGTGTAGAGGTATTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LQSQSAFLLCPCSLVAGLWVTTA*CRGIPT Trigger: TGTTGGAATACCTCTACACCAAGCAGTTGTCACCCA...AAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGTCGAACACGTCCTTaGTGCCAAACTGGTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: WLKDFRVSQLSFYVPAHWCRTRP*CQTGQT Trigger: TGTTTGACCAGTTTGGCATCAAGGACGTGTTCGACA...CCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTCAGAAACTCCCTCCCCCAAACAAAAACAAACAAACAAACAAACAAACGCGGGAGATGAGGGCTaGTCGGATGGCATTGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSETPSPKQKQTNKQTNAGDEG*SDGIVE Trigger: TTCGACAATGCCATCCGAGCAGCCCTCATCTCCCGC...GTTTGTTTGTTTGTTTGTTTGTTTTTGTTTGGGGGAGGGAGTTTCTGAAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR GCA 90 bp | TCCTGTCTTCAGAAACTCCCTCCCCCAAACAAAAACAAACAAACAAACAAACAAACCCGCACCTCCCTGTaGATGCTGACAAACCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCLQKLPPPNKNKQTNKQTRTSL*MLTNPL Trigger: CAAGGGGTTTGTCAGCATGCACAGGGAGGTGCGGGT...TTGTTTGTTTGTTTGTTTGTTTTTGTTTGGGGGAGGGAGTTTCTGAAGACAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CCA 90 bp | TGTTGTGTTTTGGCAAGAGTACAAGCGGATGGAGCTTTGGTTGTTGAAGTTCAATTGGCTTTCCGGACGTaGAAGGCTTTCGTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CCVLARVQADGALVVEVQLAFRT*KAFVIS Trigger: GGAGATCACGAAAGCCTTCCACGTCCGGAAAGCCAA...TTGAACTTCAACAACCAAAGCTCCATCCGCTTGTACTCTTGCCAAAACACAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CCA 90 bp | GACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACTGGGTGACAACTGCTTaGTGTAGAGGTATTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: DPTVRMAKETGFYSRAVNWVTTA*CRGIPT Trigger: TGTTGGAATACCTCTACACCAAGCAGTTGTCACCCA...GTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| 3UTR CAA 72 bp | CGTGGCTCATCAGAGCAAAGATTAAGCGCTTCTAGCTaGAATACTTCAGGCCTCTTCAGCTCAACCCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RGSSEQRLSASS*NTSGLFSSTLY Trigger: GTAAAGGGTTGAGCTGAAGAGGCCTGAAGTATTCAAGCTAGAAGCGCTTAATCTTTGCTCTGATGAGCCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR TCA 90 bp | AACAACAACAACAACAACAACTTGTCTTACAAAGTGAAGTTGGCCTCAGGTGTGACGTGTCCCAAAGCCTaGGGGAGATGCTCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NNNNNNNLSYKVKLASGVTCPKA*GRCSLH Trigger: ATGAAGTGAGCATCTCCCTCAGGCTTTGGGACACGT...CACACCTGAGGCCAACTTCACTTTGTAAGACAAGTTGTTGTTGTTGTTGTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR TCA 90 bp | ATTCTGGTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATGTCGAACACGTCCTTaGTGCCAAACTGGTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ILVEGLQSQSAFLLCPCSCRTRP*CQTGQT Trigger: TGTTTGACCAGTTTGGCATCAAGGACGTGTTCGACA...TGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAACCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | GACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAAGCCTCCTTGTTCATaGTATTCTCTACCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: DPTVRMAKETGFYSRAVNKPPCS*YSLPSS Trigger: GGATGATGGTAGAGAATATCATGAACAAGGAGGCTT...GTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTGGTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTTATATTTGGGAGGTaGACCTCACGGTTGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILVEGLQSQSAFLLCPCSFIFGR*TSRLAL Trigger: AAGCGCCAACCGTGAGGTTCACCTCCCAAATATAAA...TGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAACCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCATCTTGTTTATATTTaGGAGGTGAACCTCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSFPFMSLLIGGRACALIHLVYI*EVNLTV Trigger: AACCGTGAGGTTCACCTCCCAAATATAAACAAGATG...GATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAGTGGATGGGTGACAACTGCTTaGTGTAGAGGTATTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TVRMAKETGFYSRAVNSGWVTTA*CRGIPT Trigger: TGTTGGAATACCTCTACACCAAGCAGTTGTCACCCA...TCCACTGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTGGTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCACGCTCAAAGTACTCCTaGTTGTCTGCTGACTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILVEGLQSQSAFLLCPCSRSKYS*LSADLD Trigger: ATCCAAGTCAGCAGACAACCAGGAGTACTTTGAGCG...TGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAACCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTTACCTCCCAACGAAAGGATAACTCTGTAATTATGAGTGATGCTCAGTGGCACATGGTTTTCACATaGTTTAGGGAGTTGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFTSQRKDNSVIMSDAQWHMVFT*FRELGF Trigger: GAACCCCAACTCCCTAAATCATGTGAAAACCATGTG...CCACTGAGCATCACTCATAATTACAGAGTTATCCTTTCGTTGGGAGGTAAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR TCA 90 bp | GTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGAAGCCTCCTTGTTCATaGTATTCTCTACCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VEGLQSQSAFLLCPCSLVKPPCS*YSLPSS Trigger: GGATGATGGTAGAGAATATCATGAACAAGGAGGCTT...CACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | CATGTTCATGTATGTGTCTGTTGTGTTTTGGCAAGAGTACAAGCGGATGGAGCTGCTTTCGTGATCTCCTaGTTCATAAAAGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HVHVCVCCVLARVQADGAAFVIS*FIKASL Trigger: CAAGGAGGCTTTTATGAACCAGGAGATCACGAAAGC...AGCTCCATCCGCTTGTACTCTTGCCAAAACACAACAGACACATACATGAACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CCA 90 bp | TCCTGTCTTCAGAAACTCCCTCCCCCAAACAAAAACAAACAAACAAACAAACAATTGGCTTTCCGGACGTaGAAGGCTTTCGTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCLQKLPPPNKNKQTNKQLAFRT*KAFVIS Trigger: GGAGATCACGAAAGCCTTCCACGTCCGGAAAGCCAA...TTGTTTGTTTGTTTGTTTGTTTTTGTTTGGGGGAGGGAGTTTCTGAAGACAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CAA 72 bp | TGTTGTGTTTTGGCAAGAGTACAAGCGGATGGAGCTTaGGTTGTTGAAGTTCAACTAGGCCTACTCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CCVLARVQADGA*VVEVQLGLLTE Trigger: TTCAGTGAGTAGGCCTAGTTGAACTTCAACAACCAAAGCTCCATCCGCTTGTACTCTTGCCAAAACACAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| 3UTR CAA 72 bp | GGTTCCAGCAGCTGTGAAGAACACGAGAGGATATTATaGCTTTCGTCCCATGTTCATGTATGTGTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSSCEEHERIL*LSSHVHVCVCC Trigger: ACAACAGACACATACATGAACATGGGACGAAAGCAATAATATCCTCTCGTGTTCTTCACAGCTGCTGGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CCA 90 bp | TGGTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGCATCTTGTTTATATTTaGGAGGTGAACCTCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WLKDFRVSQLSFYVPAHWHLVYI*EVNLTV Trigger: AACCGTGAGGTTCACCTCCCAAATATAAACAAGATG...CCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTTGTATCAAAAGGAACAAAGTAACGGACTGAAGTGTAGTAGCTTCCTAGGTCCAGGTCCAAGTTaGGTGACAACTGCTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSLYQKEQSNGLKCSSFLGPGPS*VTTAWC Trigger: ACACCAAGCAGTTGTCACCCAACTTGGACCTGGACC...TAGGAAGCTACTACACTTCAGTCCGTTACTTTGTTCCTTTTGATACAAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000167384.8 |
||
| CDS-3UTR TCA 90 bp | TATTGCTTTCGTCCCATGTTCATGTATGTGTCTGTTGTGTTTTGGCAAGAGTACAAGCCTCCTTGTTCATaGTATTCTCTACCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: YCFRPMFMYVSVVFWQEYKPPCS*YSLPSS Trigger: GGATGATGGTAGAGAATATCATGAACAAGGAGGCTT...GTACTCTTGCCAAAACACAACAGACACATACATGAACATGGGACGAAAGCAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR TCA 90 bp | CTTCAGAAACTCCCTCCCCCAAACAAAAACAAACAAACAAACAAACAAACAAAATTTATATTTGGGAGGTaGACCTCACGGTTGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQKLPPPNKNKQTNKQTKFIFGR*TSRLAL Trigger: AAGCGCCAACCGTGAGGTTCACCTCCCAAATATAAA...TTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGTTTGGGGGAGGGAGTTTCTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CAA 90 bp | ACAGCGGCCTTGGTGAGCTCCTGGACAGCATGCTGCTCTACGAGAGCAACCAAGGTCTTCCCTACGGCGTaGTCGCCCACGACCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TAALVSSWTACCSTRATKVFPTA*SPTTTH Trigger: GTGCGTGGTCGTGGGCGACAACGCCGTAGGGAAGAC...CTTGGTTGCTCTCGTAGAGCAGCATGCTGTCCAGGAGCTCACCAAGGCCGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR CAA 90 bp | TGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGCCACTGACAGCGGCCTaGGTGAGCTCCTGGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CTRVEKPGPQTQLCGWLRPLTAA*VSSWTA Trigger: TGCTGTCCAGGAGCTCACCAAGGCCGCTGTCAGTGG...CCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACGTCTTCCCTACGGCGTaGTCGCCCACGACCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ILVEVNAHEWKSQGPRPNVFPTA*SPTTTH Trigger: GTGCGTGGTCGTGGGCGACAACGCCGTAGGGAAGAC...GTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCTAGCTGGCAGCCAACCAGGACGACGGGCGTTCGAGGGCAAAAGTGCTTGCCCACGACCACGCACTaGATGGTCTCAACGTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RSSWQPTRTTGVRGQKCLPTTTH*MVSTLG Trigger: ACCCAACGTTGAGACCATCAAGTGCGTGGTCGTGGG...CAAGCACTTTTGCCCTCGAACGCCCGTCGTCCTGGTTGGCTGCCAGCTAGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATTGTGTCAGGGTGGTGTaGCAGGCCCGGGCACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: EVNAHEWKSQGPRPNCADCVRVV*QARAQM Trigger: CATCTGTGCCCGGGCCTGCAACACCACCCTGACACA...ATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGTCGGCGCACAGGGGGTaGTCCAGTAAACAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VEVNAHEWKSQGPRPNCASAHRG*SSKQAA Trigger: TGCTGCCTGTTTACTGGACAACCCCCTGTGCGCCGA...CGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATATGCTGACAAACCCCTaGCTCCAGCCGGACAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EVNAHEWKSQGPRPNCADMLTNP*LQPDRA Trigger: CGCCCTGTCCGGCTGGAGCAAGGGGTTTGTCAGCAT...ATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCACTGGGCCCACCCGCTaGGAAATGGGGTTGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FDPGGGKCTRVEKPGPQTTGPTR*EMGLTR Trigger: GCGGGTCAACCCCATTTCCAAGCGGGTGGGCCCAGT...GGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGCTTTCACAGGCTCTGTGGTGAGACCGAGTGGAGAAGCAGGTGGTCTGCCCCACTGACAGCGGCCTaGGTGAGCTCCTGGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LCFHRLCGETEWRSRWSAPLTAA*VSSWTA Trigger: TGCTGTCCAGGAGCTCACCAAGGCCGCTGTCAGTGG...GGCAGACCACCTGCTTCTCCACTCGGTCTCACCACAGAGCCTGTGAAAGCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CAA 90 bp | CCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGCCCACGACCACGCACTaGATGGTCTCAACGTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PGGGKCTRVEKPGPQTQLPTTTH*MVSTLG Trigger: ACCCAACGTTGAGACCATCAAGTGCGTGGTCGTGGG...CAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAACTGGGCCCACCCGCTaGGAAATGGGGTTGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PGPQTQLCGWLRRLVFIVTGPTR*EMGLTR Trigger: GCGGGTCAACCCCATTTCCAAGCGGGTGGGCCCAGT...TACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCCGGGGTCAGAATTACCACATAATAGCACCATTCCCCACACTCTTAGGGTCTTCCCTACGGCGTaGTCGCCCACGACCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RDPGSELPHNSTIPHTLRVFPTA*SPTTTH Trigger: GTGCGTGGTCGTGGGCGACAACGCCGTAGGGAAGAC...CCTAAGAGTGTGGGGAATGGTGCTATTATGTGGTAATTCTGACCCCGGGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CAA 90 bp | ATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACGGGTCCAGGTCCAAGTaGGGTGACAACTGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ILVEVNAHEWKSQGPRPNGSRSK*GDNCLV Trigger: CACCAAGCAGTTGTCACCCAACTTGGACCTGGACCC...GTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGTCTTCCCTACGGCGTaGTCGCCCACGACCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSFYVPAHWWQGLCFDPGVFPTA*SPTTTH Trigger: GTGCGTGGTCGTGGGCGACAACGCCGTAGGGAAGAC...ACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGTCGGCGCACAGGGGGTaGTCCAGTAAACAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLCFDPGGGKCTRVEKPGSAHRG*SSKQAA Trigger: TGCTGCCTGTTTACTGGACAACCCCCTGTGCGCCGA...CCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAATGCTGACAAACCCCTaGCTCCAGCCGGACAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RAPDPTVRMAKETGFYSRMLTNP*LQPDRA Trigger: CGCCCTGTCCGGCTGGAGCAAGGGGTTTGTCAGCAT...TCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCGGGTCCAGGTCCAAGTaGGGTGACAACTGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FDPGGGKCTRVEKPGPQTGSRSK*GDNCLV Trigger: CACCAAGCAGTTGTCACCCAACTTGGACCTGGACCC...GGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTCCACTGACAGCGGCCTaGGTGAGCTCCTGGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: APDPTVRMAKETGFYSRAPLTAA*VSSWTA Trigger: TGCTGTCCAGGAGCTCACCAAGGCCGCTGTCAGTGG...AGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTACCACTGACAGCGGCCTaGGTGAGCTCCTGGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FMSLLIGGRACALILVEVPLTAA*VSSWTA Trigger: TGCTGTCCAGGAGCTCACCAAGGCCGCTGTCAGTGG...TACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCACGACCACGCACTaGATGGTCTCAACGTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GLCFDPGGGKCTRVEKPGPTTTH*MVSTLG Trigger: ACCCAACGTTGAGACCATCAAGTGCGTGGTCGTGGG...CCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAGTGTGTCAGGCAAAATCTGTTTGCCAAGGCAATTAACTCCAGGGGGTCCTGTGTCAGGGTGGTGTaGCAGGCCCGGGCACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TKCVRQNLFAKAINSRGSCVRVV*QARAQM Trigger: CATCTGTGCCCGGGCCTGCAACACCACCCTGACACA...GGACCCCCTGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGACACACTTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168117.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGATCGGCGCACAGGGGGTaGTCCAGTAAACAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFYVPAHWWQGLCFDPGGSAHRG*SSKQAA Trigger: TGCTGCCTGTTTACTGGACAACCCCCTGTGCGCCGA...TCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCATGCTGACAAACCCCTaGCTCCAGCCGGACAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VSFPFMSLLIGGRACALIMLTNP*LQPDRA Trigger: CGCCCTGTCCGGCTGGAGCAAGGGGTTTGTCAGCAT...GATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAGTGGAGGTACTGGGCCCACCCGCTaGGAAATGGGGTTGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VRMAKETGFYSRAVNSGGTGPTR*EMGLTR Trigger: GCGGGTCAACCCCATTTCCAAGCGGGTGGGCCCAGT...ACCTCCACTGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGGGTCCAGGTCCAAGTaGGGTGACAACTGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGPQTQLCGWLRRLVFIVGSRSK*GDNCLV Trigger: CACCAAGCAGTTGTCACCCAACTTGGACCTGGACCC...TACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTCCACTGACAGCGGCCTaGGTGAGCTCCTGGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SESVSFPFMSLLIGGRACPLTAA*VSSWTA Trigger: TGCTGTCCAGGAGCTCACCAAGGCCGCTGTCAGTGG...ACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCACCCACGACCACGCACTaGATGGTCTCAACGTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QGLCFDPGGGKCTRVEKPPTTTH*MVSTLG Trigger: ACCCAACGTTGAGACCATCAAGTGCGTGGTCGTGGG...TGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGTGTGTCAGGGTGGTGTaGCAGGCCCGGGCACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KDFRVSQLSFYVPAHWWQCVRVV*QARAQM Trigger: CATCTGTGCCCGGGCCTGCAACACCACCCTGACACA...CTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGACTGGGCCCACCCGCTaGGAAATGGGGTTGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: WLKDFRVSQLSFYVPAHWTGPTR*EMGLTR Trigger: GCGGGTCAACCCCATTTCCAAGCGGGTGGGCCCAGT...CCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATCTGAGAAGGTGCCCTaGCTGAGACATTCTTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: GGKCTRVEKPGPQTQLCGSEKVP*LRHSLI Trigger: GATCAAAGAATGTCTCAGCAAGGGCACCTTCTCAGA...TCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGTCCAGGTCCAAGTaGGGTGACAACTGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGLCFDPGGGKCTRVEKPGSRSK*GDNCLV Trigger: CACCAAGCAGTTGTCACCCAACTTGGACCTGGACCC...TGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGGGGTCCAGGTCCAAGTaGGGTGACAACTGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLQSQSAFLLCPCSLVAGGSRSK*GDNCLV Trigger: CACCAAGCAGTTGTCACCCAACTTGGACCTGGACCC...CCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCCCACGACCACGCACTaGATGGTCTCAACGTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSFPFMSLLIGGRACALIPTTTH*MVSTLG Trigger: ACCCAACGTTGAGACCATCAAGTGCGTGGTCGTGGG...GATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGTGTCAGGGTGGTGTaGCAGGCCCGGGCACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: WLKDFRVSQLSFYVPAHWCVRVV*QARAQM Trigger: CATCTGTGCCCGGGCCTGCAACACCACCCTGACACA...CCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACATGTGTCAGGGTGGTGTaGCAGGCCCGGGCACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TQLCGWLRRLVFIVELSTCVRVV*QARAQM Trigger: CATCTGTGCCCGGGCCTGCAACACCACCCTGACACA...TGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTTGTCGAACACGTCCTaGATGCCAAACTGGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ILVEVNAHEWKSQGPRPNLSNTS*MPNWSN Trigger: GTTTGACCAGTTTGGCATCAAGGACGTGTTCGACAA...GTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TGGTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGATGCTGACAAACCCCTaGCTCCAGCCGGACAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WLKDFRVSQLSFYVPAHWMLTNP*LQPDRA Trigger: CGCCCTGTCCGGCTGGAGCAAGGGGTTTGTCAGCAT...CCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAGTGGATCGGCGCACAGGGGGTaGTCCAGTAAACAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVRMAKETGFYSRAVNSGSAHRG*SSKQAA Trigger: TGCTGCCTGTTTACTGGACAACCCCCTGTGCGCCGA...TCCACTGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | ACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGATCAGGCAAAATCTGTTaGCCAAGGCAATTAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TRVEKPGPQTQLCGWLRRSGKIC*PRQLTP Trigger: TGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGA...TCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGTCAGGCAAAATCTGTTaGCCAAGGCAATTAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VEVNAHEWKSQGPRPNCASGKIC*PRQLTP Trigger: TGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGA...CGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGTCTTCAGAAACTCCCTCCCCCAAACAAAAACAAACAAACAAACAAACAAGTCTTCCCTACGGCGTaGTCGCCCACGACCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SCLQKLPPPNKNKQTNKQVFPTA*SPTTTH Trigger: GTGCGTGGTCGTGGGCGACAACGCCGTAGGGAAGAC...TTGTTTGTTTGTTTGTTTGTTTTTGTTTGGGGGAGGGAGTTTCTGAAGACAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTTGTGCTTTGATCCTGGTGGAGGTAAATGCACACGAGTGGAAAAGCCATTGTCGAACACGTCCTaGATGCCAAACTGGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QGLCFDPGGGKCTRVEKPLSNTS*MPNWSN Trigger: GTTTGACCAGTTTGGCATCAAGGACGTGTTCGACAA...TGGCTTTTCCACTCGTGTGCATTTACCTCCACCAGGATCAAAGCACAAGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTTTGTCGAACACGTCCTaGATGCCAAACTGGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FYVPAHWWQGLCFDPGGGLSNTS*MPNWSN Trigger: GTTTGACCAGTTTGGCATCAAGGACGTGTTCGACAA...ACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATTCATAAAAGCCTCCTaGTTCATGATATTCTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: GGKCTRVEKPGPQTQLCGFIKAS*FMIFST Trigger: GGTAGAGAATATCATGAACAAGGAGGCTTTTATGAA...TCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTCATAAAAGCCTCCTaGTTCATGATATTCTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: VEKPGPQTQLCGWLRRLVFIKAS*FMIFST Trigger: GGTAGAGAATATCATGAACAAGGAGGCTTTTATGAA...AACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTATTGCTGAGACATTCTTaGATCCGATTGGCTTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FMSLLIGGRACALILVEVLLRHS*IRLAFR Trigger: CCGGAAAGCCAATCGGATCAAAGAATGTCTCAGCAA...TACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTAAATGCACACGAGTGGAAAAGCCAGGGCCCCAGACCCAACTGTGCGGATTTCATAAAAGCCTCCTaGTTCATGATATTCTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: EVNAHEWKSQGPRPNCADFIKAS*FMIFST Trigger: GGTAGAGAATATCATGAACAAGGAGGCTTTTATGAA...ATCCGCACAGTTGGGTCTGGGGCCCTGGCTTTTCCACTCGTGTGCATTTACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GAACCATCGTGGTTAAAGGCGGATCAGTGTCAACCAAATGAACCAGCCACTTGGTTGCTGAGACATTCTTaGATCCGATTGGCTTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EPSWLKADQCQPNEPATWLLRHS*IRLAFR Trigger: CCGGAAAGCCAATCGGATCAAAGAATGTCTCAGCAA...CCAAGTGGCTGGTTCATTTGGTTGACACTGATCCGCCTTTAACCACGATGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CAA 90 bp | CAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTTTGCTGAGACATTCTTaGATCCGATTGGCTTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QLSFYVPAHWWQGLCFDPLLRHS*IRLAFR Trigger: CCGGAAAGCCAATCGGATCAAAGAATGTCTCAGCAA...AGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTTCTGAGAAGGTGCCCTaGCTGAGACATTCTTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LSFYVPAHWWQGLCFDPGSEKVP*LRHSLI Trigger: GATCAAAGAATGTCTCAGCAAGGGCACCTTCTCAGA...ACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCAGGGCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATATCAGGCAAAATCTGTTaGCCAAGGCAATTAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KPGPQTQLCGWLRRLVFISGKIC*PRQLTP Trigger: TGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGA...TATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGCCCTGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTGGTGGAGGTATCTGCTGACTTGGATTaGATTTCCTTGCGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FMSLLIGGRACALILVEVSADLD*ISLRNL Trigger: CAAGTTCCGCAAGGAAATCAAATCCAAGTCAGCAGA...TACCTCCACCAGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGACCCAACTGTGCGGATGGCTAAGGAGACTGGTTTTTATAGTAGAGCTTCTGCTGACTTGGATTaGATTTCCTTGCGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: APDPTVRMAKETGFYSRASADLD*ISLRNL Trigger: CAAGTTCCGCAAGGAAATCAAATCCAAGTCAGCAGA...AGCTCTACTATAAAAACCAGTCTCCTTAGCCATCCGCACAGTTGGGTCTGGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTAAGGAGACTGGTTTTTATAGTAGAGCTGTCAACAGTGGAGGTGGCCCTTTTGCTGAGACATTCTTaGATCCGATTGGCTTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: WLRRLVFIVELSTVEVALLLRHS*IRLAFR Trigger: CCGGAAAGCCAATCGGATCAAAGAATGTCTCAGCAA...AAGGGCCACCTCCACTGTTGACAGCTCTACTATAAAAACCAGTCTCCTTAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGTCTGAGAAGGTGCCCTaGCTGAGACATTCTTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: KDFRVSQLSFYVPAHWWQSEKVP*LRHSLI Trigger: GATCAAAGAATGTCTCAGCAAGGGCACCTTCTCAGA...CTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTGATCCTTCTGCTGACTTGGATTaGATTTCCTTGCGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: QLSFYVPAHWWQGLCFDPSADLD*ISLRNL Trigger: CAAGTTCCGCAAGGAAATCAAATCCAAGTCAGCAGA...AGGATCAAAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | ACCCGGGGTCAGAATTACCACATAATAGCACCATTCCCCACACTCTTAGGATTTTTGTCGAACACGTCCTaGATGCCAAACTGGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TRGQNYHIIAPFPTLLGFLSNTS*MPNWSN Trigger: GTTTGACCAGTTTGGCATCAAGGACGTGTTCGACAA...AAATCCTAAGAGTGTGGGGAATGGTGCTATTATGTGGTAATTCTGACCCCGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||
| CDS-3UTR CAA 90 bp | TCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTTCAGGCAAAATCTGTTaGCCAAGGCAATTAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SESVSFPFMSLLIGGRACSGKIC*PRQLTP Trigger: TGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGA...ACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATTGGTGGCAGGGCTTGTGCTTTCAGGCAAAATCTGTTaGCCAAGGCAATTAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQSAFLLCPCSLVAGLVLSGKIC*PRQLTP Trigger: TGGAGTTAATTGCCTTGGCAAACAGATTTTGCCTGA...AAGCACAAGCCCTGCCACCAATGAGCAGGGACATAAAAGGAAAGCTGACTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000163760.2 ENSMUST00000164034.8 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTGGTTGAAGGACTTCAGAGTCAGTCAGCTTTCCTTTTATGTCCCTGCTCATCTGCTGACTTGGATTaGATTTCCTTGCGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILVEGLQSQSAFLLCPCSSADLD*ISLRNL Trigger: CAAGTTCCGCAAGGAAATCAAATCCAAGTCAGCAGA...TGAGCAGGGACATAAAAGGAAAGCTGACTGACTCTGAAGTCCTTCAACCAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 ENSMUST00000167384.8 |
||
| CDS-3UTR CAA 90 bp | TATGTGGCCATGCCAGAAACAAAACGCCTGCCTGTGGTCTACACAGCTTTTCAATTCATAAAAGCCTCCTaGTTCATGATATTCTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: YVAMPETKRLPVVYTAFQFIKAS*FMIFST Trigger: GGTAGAGAATATCATGAACAAGGAGGCTTTTATGAA...TTGAAAAGCTGTGTAGACCACAGGCAGGCGTTTTGTTTCTGGCATGGCCACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020101.12 ENSMUST00000067908.14 |
||